MELO3C001950.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C001950.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Tetratricopeptide repeat (TPR)-containing protein
Location	chr12 : 27253059 .. 27255997 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCACTGACAGTGTCTCCACACTCTAATAAAAGCGAAAGAAAGAATAAAGACAATACGAAAAGCAAAGGGATAGAAAGGGGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCGTCTCTCCCATTTCTTCCAAATCCAAACCACACCTCTTTCTCTTCTTCTTCAGATTCCATTTCTAAACGTAGCTCGATTCATGCTCAAACTCACCACCAAGAGATTCGCGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCTCGCCCTCGAAATTCTCAGCGCCCTCGCACCTCCCACCATTGTCGTCAATCCCTCCGGTTGTTTAGGCAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGACGGATTCGTCATCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTCATCATCCAATTATCTGGCCGAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATCGTTGATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCCGAACAATACATCATGTATGATGCCCTGCTTCAATTTGTTGCAGGCGATAGATTTAATACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCTATGTTCTATCTTATTACATATAAATCATGGCTATCTGTCCCCTCTTATACTAATTTTGGTAACTATAGTTGAACTTACGGCGGTAAACGCCGACAATTATTGTTGCTCGTCGATTTATCCTGTATCTTTCTAGCATTTCTATATTTCTGCACTTAAAAAACTGTGTAAATGTATTTGCTAAAGCAGATGCATCCGGAAACTATAGTTTCACAGAACTAGTAAATTTTCAGGTCCGTCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTAGATAATCATCATGTGCATTACATTTCATCTAAAAAATTAGACGGTAGTTTTGAGGAAACAACTAGGCCGTTTACACTTCAATGAGTCTGGATTGTGAATATAATCATTACTGAAGGGATATATTGTTTGGAACTAACAAGTGCAGAGAGTACCTCAATATTTTTTTACAAGATTTTTTACTTATTTTCCGATTTCTTTCGCTCCAAATGTTTTTAAGCAGATTTGTGTAGTACAGAACTTTAAGTGTCGACCAAAAGAAAATTCGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTCCCCGAGTCTTTGTGAGGCTTGAATCTTTACATGTTAATATTAAAATTGAATGTTAAGAAACAGTAATTGCGATGGTCAGGACACTCATCGATGTTAAAGAAGAAAAAGGAAAATAAAAAGATATCTTAATTGAAAAGTCAAAAGACTGATGATGCTCAACTATAATTTAGAGGTCCTTCAAACACGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTATTGTCCTTCTATTGAAAAGATGTGAGAAGAAAGGATTCTTGCCCTATAGTAGTTTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGTGACGTATTTTTAGCTATGGACAAGTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATATGAGCAGACTATGGGCAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGGATATTTGCTCCCCACCCAAGGATTTTATTTATTTATTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATACTTAGGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTTTTGAAGACAAAATTCAATAATTTATTAATTAACTTAGAAAAAACTGTTTTCAAAACGTTGTTGACTCTAATAACCAGTTTATATCTGGGAACAACTTAAACTTTCTTCTTATAATTACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGACTATTCGTTTATAAAATCTTTTAAAATTCTGTTTTGATCCCAAACCGGGCAAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCACTTAACTCTTTCAATCATAAGATTTATACCCTCTAGGAGTGATCCGTCCTCGTCATTTTTACAAAAGGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTAGGAGAAGCTTAAATTTTAATATTTGCCCGCTATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTGGGTCGAGGAAGAAAAATAATTAATGAAAAACAGTTCGAGACTCAGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGTCTTTGAAATCTTCATTAGATTAAATGCATATGAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAGAATGATTTTAATATGGGGGAAAATAGGTGGAGAAAAGCATCAGACAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGTGCTTATAAAATTCACTCCAAAGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTT

mRNA sequence

AATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCACTGACAGTGTCTCCACACTCTAATAAAAGCGAAAGAAAGAATAAAGACAATACGAAAAGCAAAGGGATAGAAAGGGGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCGTCTCTCCCATTTCTTCCAAATCCAAACCACACCTCTTTCTCTTCTTCTTCAGATTCCATTTCTAAACGTAGCTCGATTCATGCTCAAACTCACCACCAAGAGATTCGCGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCTCGCCCTCGAAATTCTCAGCGCCCTCGCACCTCCCACCATTGTCGTCAATCCCTCCGGTTGTTTAGGCAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGACGGATTCGTCATCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTCATCATCCAATTATCTGGCCGAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAATACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCTATGTTCTATCTTATTACATATAAATCATGGCTATCTGTCCCCTCTTATACTAATTTTGGTAACTATAGTTGAACTTACGGCGGTAAACGCCGACAATTATTGTTGCTCGTCGATTTATCCTGTATCTTTCTAGCATTTCTATATTTCTGCACTTAAAAAACTGTGTAAATGTATTTGCTAAAGCAGATGCATCCGGAAACTATAGTTTCACAGAACTAGTAAATTTTCAGGTCCGTCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGTGACGTATTTTTAGCTATGGACAAGTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTGGGTCGAGGAAGAAAAATAATTAATGAAAAACAGTTCGAGACTCAGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGTCTTTGAAATCTTCATTAGATTAAATGCATATGAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAGAATGATTTTAATATGGGGGAAAATAGGTGGAGAAAAGCATCAGACAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGTGCTTATAAAATTCACTCCAAAGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTT

Coding sequence (CDS)

ATGAAGGGAAGTGTGTGTTTCCTCTGCGCGTCTCTCCCATTTCTTCCAAATCCAAACCACACCTCTTTCTCTTCTTCTTCAGATTCCATTTCTAAACGTAGCTCGATTCATGCTCAAACTCACCACCAAGAGATTCGCGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCTCGCCCTCGAAATTCTCAGCGCCCTCGCACCTCCCACCATTGTCGTCAATCCCTCCGGTTGTTTAGGCAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGACGGATTCGTCATCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTCATCATCCAATTATCTGGCCGAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAATACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCTATGTTCTATCTTATTACATATAAATCATGGCTATCTGTCCCCTCTTATACTAATTTTGGTAACTATAGTTGA

Protein sequence

MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRCSTSSSMFYLITYKSWLSVPSYTNFGNYS

Homology

[Close]

BLAST of MELO3C001950.2 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 3.2e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
           ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 173

[Close]

BLAST of MELO3C001950.2 vs. NCBI nr
Match: XP_004137391.1 (PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_1G031840 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173

[Close]

BLAST of MELO3C001950.2 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 4.1e-63
Identity = 131/173 (75.72%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLCIPLRF--PPNRTSFSSTSISL---TPIRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
            LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+GHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]

BLAST of MELO3C001950.2 vs. NCBI nr
Match: XP_022923909.1 (uncharacterized protein LOC111431489 isoform X2 [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 4.1e-63
Identity = 131/173 (75.72%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLCIPLRF--PPNRTSFSSTSISL---TPIRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
            LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+GHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]

BLAST of MELO3C001950.2 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 3.4e-62
Identity = 130/173 (75.14%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLCIPLRF--PPNRTSFSSTSISL---TPIRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
            LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+GHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DS+GVSKSLEALAL KRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Sbjct: 121 DSLGVSKSLEALALWKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDR 166

[Close]

BLAST of MELO3C001950.2 vs. TAIR10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36
Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 43  QEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHC 102
           +EIRVCTNRTCRRQGSF  LE L+ALAPP + V    CLG+CG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 103 GTPARAADLIIQLSG---RDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAID 162
            TP+RAA+++  L G     S S  V+ +L ALAL   A  +++ GNFS+AE LL+QA++
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 163 LIPCGGIHIIFKDR 174
           L P GG+H IFK R
Sbjct: 139 LKPYGGLHRIFKHR 152

[Close]

BLAST of MELO3C001950.2 vs. TrEMBL
Match: tr|A0A1S3AUF9|A0A1S3AUF9_CUCME (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
           ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 173

[Close]

BLAST of MELO3C001950.2 vs. TrEMBL
Match: tr|A0A0A0LQA2|A0A0A0LQA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-86
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR 174
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDR 173

[Close]

BLAST of MELO3C001950.2 vs. TrEMBL
Match: tr|V4TML8|V4TML8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021617mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.4e-41
Identity = 87/148 (58.78%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 33  RSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAV 92
           R+ I+A+   +E+RVCTNRTCRRQGS   LE LS+LAPP + V   GCLG+CGAGPN+  
Sbjct: 54  RARINAEL--KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCLGRCGAGPNLVA 113

Query: 93  LPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAEL 152
           LPDG V+GHCGTPARA+++++ L G  SD    +K+LEALALRKRA+ E E  NFS+A+ 
Sbjct: 114 LPDGVVVGHCGTPARASEILMVLCGIKSDH-DAAKNLEALALRKRAEAEFEKANFSEADG 173

Query: 153 LLSQAIDLIPCGGIHIIFKDRCSTSSSM 181
            LSQAI+L P GGIH+++KDRC    +M
Sbjct: 174 FLSQAIELKPFGGIHVLYKDRCLARLTM 198

[Close]

BLAST of MELO3C001950.2 vs. TrEMBL
Match: tr|A0A067E4F5|A0A067E4F5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026145mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.4e-41
Identity = 87/148 (58.78%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 33  RSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAV 92
           R+ I+A+   +E+RVCTNRTCRRQGS   LE LS+LAPP + V   GCLG+CGAGPN+  
Sbjct: 33  RARINAEL--KELRVCTNRTCRRQGSMQILETLSSLAPPEVAVKSCGCLGRCGAGPNLVA 92

Query: 93  LPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAEL 152
           LPDG V+GHCGTPARA+++++ L G  SD    +K+LEALALRKRA+ E E  NFS+A+ 
Sbjct: 93  LPDGVVVGHCGTPARASEILMVLCGIKSDH-DAAKNLEALALRKRAEAEFEKANFSEADG 152

Query: 153 LLSQAIDLIPCGGIHIIFKDRCSTSSSM 181
            LSQAI+L P GGIH+++KDRC    +M
Sbjct: 153 FLSQAIELKPFGGIHVLYKDRCLARLTM 177

[Close]

BLAST of MELO3C001950.2 vs. TrEMBL
Match: tr|A0A2G9GZN4|A0A2G9GZN4_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02417 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 80/137 (58.39%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 44  EIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCG 103
           EIRVCTNRTCR+QGS  AL++LS +APP + VN  GCLG+CG+GPN+ +LP+G  +GHCG
Sbjct: 50  EIRVCTNRTCRKQGSLNALQVLSGIAPPFVTVNSCGCLGRCGSGPNIVILPEGVFVGHCG 109

Query: 104 TPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPC 163
           TP++AAD +  + G D  S+G  K LEALALRKRA+ E+  G+F++A  LLSQAIDL P 
Sbjct: 110 TPSKAADTMAVICGVDEASMGRQKCLEALALRKRAEDEMGRGDFARAFSLLSQAIDLKPF 169

Query: 164 GGIHIIFKDRCSTSSSM 181
           GG+HII+K+R +   +M
Sbjct: 170 GGVHIIYKERSAARLAM 186

The following BLAST results are available for this feature:

BLAST of MELO3C001950.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437609.1	3.2e-92	100.00	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_004137391.1	1.5e-86	93.64	PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hy...	[more]
XP_022923908.1	4.1e-63	75.72	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
XP_022923909.1	4.1e-63	75.72	uncharacterized protein LOC111431489 isoform X2 [Cucurbita moschata]	[more]
XP_023519354.1	3.4e-62	75.14	small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]

BLAST of MELO3C001950.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17670.2	3.0e-36	54.48	tetratricopeptide repeat (TPR)-containing protein	[more]

BLAST of MELO3C001950.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C001950.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AUF9\|A0A1S3AUF9_CUCME	2.1e-92	100.00	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ...	[more]
tr\|A0A0A0LQA2\|A0A0A0LQA2_CUCSA	1.0e-86	93.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1	[more]
tr\|V4TML8\|V4TML8_9ROSI	6.4e-41	58.78	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021617mg PE=4 ...	[more]
tr\|A0A067E4F5\|A0A067E4F5_CITSI	6.4e-41	58.78	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026145mg PE=4 SV=1	[more]
tr\|A0A2G9GZN4\|A0A2G9GZN4_9LAMI	1.2e-39	58.39	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02417 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001950.2.1	MELO3C001950.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 40..128 e-value: 4.2E-8 score: 35.2
None	No IPR available	PANTHER	PTHR22904:SF368	TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 15..180
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 15..180
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 45..112 e-value: 1.27089E-12 score: 59.178
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 45..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C001950.2	Csa1G031840	Cucumber (Chinese Long) v2	cumedB022
MELO3C001950.2	CSPI01G05220	Wild cucumber (PI 183967)	cpimedB023
MELO3C001950.2	Cucsa.112420	Cucumber (Gy14) v1	cgymedB156
MELO3C001950.2	CmaCh13G011070	Cucurbita maxima (Rimu)	cmamedB219
MELO3C001950.2	CmoCh13G011550	Cucurbita moschata (Rifu)	cmomedB207
MELO3C001950.2	Lsi02G000360	Bottle gourd (USVL1VR-Ls)	lsimedB189
MELO3C001950.2	Cp4.1LG20g00490	Cucurbita pepo (Zucchini)	cpemedB553
MELO3C001950.2	Cla018642	Watermelon (97103) v1	medwmB170
MELO3C001950.2	ClCG04G012580	Watermelon (Charleston Gray)	medwcgB146
MELO3C001950.2	Cla97C04G079570	Watermelon (97103) v2	medwmbB147
MELO3C001950.2	Bhi08G001616	Wax gourd	medwgoB178
MELO3C001950.2	Carg04731	Silver-seed gourd	carmedB0396
MELO3C001950.2	CsaV3_1G005120	Cucumber (Chinese Long) v3	cucmedB022

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C001950.2	Cucumber (Gy14) v2	cgybmedB020
MELO3C001950.2	Cucurbita maxima (Rimu)	cmamedB452
MELO3C001950.2	Cucurbita moschata (Rifu)	cmomedB440
MELO3C001950.2	Cucurbita pepo (Zucchini)	cpemedB582
MELO3C001950.2	Silver-seed gourd	carmedB0529