CSPI01G05220 (gene) Wild cucumber (PI 183967)

NameCSPI01G05220
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTetratricopeptide repeat-containing protein
LocationChr1 : 3405180 .. 3407922 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATTGATATTGTTGATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCTGATCAATACATTATGTATGATGTCCTGCTTCAATTTGTTGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTGTACTAAGTTTGGTAACTATAGTTGAACTTATGGCGGTAAACACTGACAATTATTGTTGCTCGTCGATTTATCCTGCATGTTTCTAGCATTTGTATATTTCTGGACTTAAAAAATTGTTTGTAAATGTATTTGCTAAAGCAGATGCATCCAGAAAATATAGTTTCACAGAACTAGTAAATTTTCAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTATATATTCATTGTGTGCATTACATTTCATCTAAAAAAATTAGACGGTGGTTTCGAGAAAATAACTAGGCTGTTTACACTTCAACGAGTCTGGGTTGTGAATATAATCATTACTGAAGAGACATTGTTTGGAACTACCAACTGCGGAGAATACCTCAATATTTTCTACAAGGTTTTTTACTTATATTCCTATTTCTTCCACTCCAAATGTTTTTAAGCAGATTTGCGTAGCACTATACTTTCAGTGTCCACTAAAAGAAAATTTGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTCCCTGAGTCTTTGTGATGCTTGAATCTTTACATGTTAATATTATAATTGAATGCTAAGAAACAGTAATTGCGGTGGACAAGGTTAAAGAAGAAAAAGGAAAATAAATAGAAATCTTAGTTGAAAAGTCAAAAGACTGATGATGCTCAACTATAATTTAGAGGTCCTTCAAACATGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTCTTATCCTTCAATTGAAAAGATGTGAGAAGAAAGGATTCTTGCTCTAGAGTAGATTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATAGGAGCTTACTATGGGCAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGGATATTTGCTCCCCAACCAAGGATTTTATTTATTTTTTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATATTTAAGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTGTTGAGGACAAAATTCAATAATTTATTAATTAACTTTAAAAAAACTGTTTTCAAAATGTTGTTGACACTAATGACCGGTTTGTACCCGAGAACAACTTACTTTCTTCTTATAATAACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGAGTATTCATTTATGAACTTCTTTTAAATTCTTTTGATCCCAAGCCGGGCACAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCAATTAACACTTTCAATCATAAGATTTGTACCCTTTTGGAGTGATCCGTCCTTGTAATTTTACAAAATGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTGGGAGAAGGTTACATTTTAATATTTGCCCGCCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCGGAGATGTAGGTCAAGGAAGAAAGGTAACTAATGAAAACAGTTTGAGACTCTGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGCCTTTGAAATCTTCATTAGATTAAATACATACAAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAAAATGATTTTAATATCAGGGAAAATAGGCGAAGAAAAGCATCAGATAGTAAATGTTT

mRNA sequence

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA

Coding sequence (CDS)

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.3e-08
Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 1

Query: 112 IIQLSGQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFK 171
           ++ LS    + VG     +A  L+      +++ N++ A    +QAI+L P   ++  + 
Sbjct: 71  VLPLSNSVPEDVG-----KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY--YC 130

Query: 172 DRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEID 231
           +R+  +  LG+++ A++D  +A+ +  +Y +AY   G A  A++ F+ A  SY  AL++D
Sbjct: 131 NRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLD 190

Query: 232 PSIRRSKSFKARVAKLQEKLSAV 255
           P    + S+K+ +   ++KL  V
Sbjct: 191 P---ENDSYKSNLKIAEQKLREV 203

BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 1

Query: 117 GQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIV 176
           G D        S EA  L+     +++  NF  A  L  +AI+L P   ++  F +R+  
Sbjct: 77  GPDRTPPSEEDSAEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVY--FCNRAAA 136

Query: 177 RLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRR 236
              LGN+ GA++D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP    
Sbjct: 137 YSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDT 196

Query: 237 SKS-FKARVAKLQE 250
            KS  K    KL+E
Sbjct: 197 YKSNLKIAELKLRE 208

BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07
Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 1

Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           S EA  L+     +++  NF  A     +AI+L P   ++  F +R+     LGN++GA+
Sbjct: 88  SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAV 147

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKL 247
           +D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP     KS   +VA+L
Sbjct: 148 QDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNETYKS-NLKVAEL 205

Query: 248 Q 249
           +
Sbjct: 208 R 205

BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.5e-07
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 1

Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           S EA  L+     +++  NF  A     +AI+L P   ++  F +R+     LGN++GA+
Sbjct: 88  SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAV 147

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS-FKARVAK 247
           +D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP     KS  K    K
Sbjct: 148 QDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 207

Query: 248 LQE 250
           L+E
Sbjct: 208 LRE 208

BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 4.6e-07
Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 1

Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           S EA  L+     +++  NF  A  L  +AI+L P   ++  F +R+     LGN+ GA+
Sbjct: 89  SAEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVY--FCNRAAAYSKLGNYVGAV 148

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS-FKARVAK 247
           +D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP     KS  K    K
Sbjct: 149 QDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLKIAELK 208

Query: 248 LQE 250
           L+E
Sbjct: 209 LRE 209

BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A0A0LQA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.3e-141
Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

BLAST of CSPI01G05220 vs. TrEMBL
Match: F6HVT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00600 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77
Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1

Query: 1   MKGSVCFLCGS-LP-FLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGS 60
           MKG V FL  S +P  LP PN +  S +    SKR  + A+    E+RVC NRTCRRQGS
Sbjct: 40  MKGGVSFLNASPIPQLLPLPN-DRLSIARVYTSKRRRLRAEI---ELRVCVNRTCRRQGS 99

Query: 61  FHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQ 120
              LE L+ +A P++ V   GCLG+CGAGPN+  LPDG +VGHCGT ARAA++++     
Sbjct: 100 LQTLETLSGIASPDVAVKSCGCLGRCGAGPNLVALPDGVIVGHCGTAARAAEVMMSFVAG 159

Query: 121 DSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRL 180
           D+       SL ALALRKRA+ ELE  NFS+AELLLSQAIDLKP GGIHII+K RS  RL
Sbjct: 160 DAQG-----SLAALALRKRAENELEKNNFSEAELLLSQAIDLKPSGGIHIIYKVRSSARL 219

Query: 181 ALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSK 240
            +GN++GALEDANEAL +AP+Y EAYICQGDAFLAMD FD AE SYST LE+DPSIRRSK
Sbjct: 220 TMGNYAGALEDANEALTLAPRYPEAYICQGDAFLAMDQFDDAEKSYSTCLELDPSIRRSK 279

Query: 241 SFKARVAKLQEKLSAVRTQ 258
           SF+ARVAKLQEKLSA  T+
Sbjct: 280 SFRARVAKLQEKLSAASTR 289

BLAST of CSPI01G05220 vs. TrEMBL
Match: I1K580_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G249000 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74
Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 1

Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           QEIRVCTNRTCRRQGSF  LE L+ LAPPN+ V   GCLG+CG GPN+ VLPDG +VGHC
Sbjct: 24  QEIRVCTNRTCRRQGSFQTLETLSGLAPPNVAVKSCGCLGRCGGGPNLVVLPDGLIVGHC 83

Query: 103 GTPARAADLIIQL----SGQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAI 162
           GT ARAA++I  L     G D  +      L+ALALRKRA+ E    NF++AELLLSQAI
Sbjct: 84  GTAARAAEVIATLFAGAGGHDPKTC-----LDALALRKRAEIEFAKRNFTEAELLLSQAI 143

Query: 163 DLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFD 222
           DLKP GGIHI FK RS VRL LGN+SGALEDA EAL +AP Y EAYICQGDAFLA++ FD
Sbjct: 144 DLKPFGGIHITFKCRSFVRLELGNYSGALEDAEEALALAPGYSEAYICQGDAFLALNKFD 203

Query: 223 SAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRT 257
            AE SYS +L IDPSIR SKSFKAR+AKLQEKL+AV+T
Sbjct: 204 LAEQSYSASLVIDPSIRHSKSFKARIAKLQEKLAAVKT 236

BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A0B2PSF2_GLYSO (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Glycine soja GN=glysoja_040667 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74
Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 1

Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           QEIRVCTNRTCRRQGSF  LE L+ LAPPN+ V   GCLG+CG GPN+ VLPDG +VGHC
Sbjct: 24  QEIRVCTNRTCRRQGSFQTLETLSGLAPPNVAVKSCGCLGRCGGGPNLVVLPDGLIVGHC 83

Query: 103 GTPARAADLIIQL----SGQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAI 162
           GT ARAA++I  L     G D  +      L+ALALRKRA+ E    NF++AELLLSQAI
Sbjct: 84  GTAARAAEVIATLFAGAGGHDPKTC-----LDALALRKRAEIEFAKRNFTEAELLLSQAI 143

Query: 163 DLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFD 222
           DLKP GGIHI FK RS VRL LGN+SGALEDA EAL +AP Y EAYICQGDAFLA++ FD
Sbjct: 144 DLKPFGGIHITFKCRSFVRLELGNYSGALEDAEEALALAPGYSEAYICQGDAFLALNKFD 203

Query: 223 SAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRT 257
            AE SYS +L IDPSIR SKSFKAR+AKLQEKL+AV+T
Sbjct: 204 LAEQSYSASLVIDPSIRHSKSFKARIAKLQEKLAAVKT 236

BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A151TK34_CAJCA (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Cajanus cajan GN=KK1_023753 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.8e-74
Identity = 145/216 (67.13%), Postives = 170/216 (78.70%), Query Frame = 1

Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           QEIRVCTNRTCRRQGSF  LE L+ LAPPN+ V   GCLG+CG GPN+ +LPDG +VGHC
Sbjct: 35  QEIRVCTNRTCRRQGSFQTLETLSGLAPPNVAVKSCGCLGRCGGGPNLVLLPDGLIVGHC 94

Query: 103 GTPARAADLIIQL--SGQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL 162
           GT ARAA+L++ L   G D +S      L+ALALRKRA  E  + NF++AELLLSQAIDL
Sbjct: 95  GTAARAAELMVTLYAGGYDPNSC-----LDALALRKRADIEFANRNFTEAELLLSQAIDL 154

Query: 163 KPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSA 222
           KP GG+H+ FK RS VRL LGN+SGALEDA +AL +AP Y EAYICQGDAFLAM+ FD A
Sbjct: 155 KPFGGMHVAFKCRSYVRLELGNYSGALEDAEKALALAPGYSEAYICQGDAFLAMNKFDLA 214

Query: 223 EISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRT 257
           E SYS +L++DPSIR SKSFKAR+ KLQEKL+A  T
Sbjct: 215 EQSYSASLDVDPSIRHSKSFKARITKLQEKLAAANT 245

BLAST of CSPI01G05220 vs. TAIR10
Match: AT3G17670.2 (AT3G17670.2 tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 246.1 bits (627), Expect = 2.3e-65
Identity = 120/212 (56.60%), Postives = 157/212 (74.06%), Query Frame = 1

Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLG+CG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 103 GTPARAADLIIQLSG---QDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAID 162
            TP+RAA+++  L G   + S S  V+ +L ALAL   A  +++ GNFS+AE LL+QA++
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 163 LKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDS 222
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 223 AEISYSTALEIDPSIRRSKSFKARVAKLQEKL 252
           AE SY T LEIDPS+RRSK FKAR+AKLQ+K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

BLAST of CSPI01G05220 vs. TAIR10
Match: AT1G12270.1 (AT1G12270.1 stress-inducible protein, putative)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08
Identity = 30/105 (28.57%), Postives = 54/105 (51.43%), Query Frame = 1

Query: 135 RKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEAL 194
           + +       G+F+ A    ++AI L P    H++F +RS    +L  ++ AL DA E +
Sbjct: 6   KAKGNAAFSSGDFTTAINHFTEAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETI 65

Query: 195 RVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS 240
           ++ P + + Y   G A L ++ F+ A  +Y   L++DP+    KS
Sbjct: 66  KLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDPTNEALKS 108

BLAST of CSPI01G05220 vs. TAIR10
Match: AT1G04190.1 (AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 1

Query: 133 ALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANE 192
           +L+++     + GNF +A  L +QAI L P      ++ +R+   L+L   S AL DA  
Sbjct: 17  SLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNAT--LYSNRAAAFLSLVKLSKALADAET 76

Query: 193 ALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEK 251
            +++ PQ+ + Y  +G    AM+ ++ A  ++  AL+ +P          R+ +LQ++
Sbjct: 77  TIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQYNPQSTEVSRKIKRLGQLQKE 132

BLAST of CSPI01G05220 vs. TAIR10
Match: AT4G11260.1 (AT4G11260.1 phosphatase-related)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 30/104 (28.85%), Postives = 55/104 (52.88%), Query Frame = 1

Query: 131 ALALRKRAQCELEDGNFSQAELLLSQAIDLKP-CGGIHIIFKDRSIVRLALGNHSGALED 190
           A  L ++A+    D +F  A  L S+AIDL P C      F DR+   + + N + A+ D
Sbjct: 2   AKELAEKAKEAFLDDDFDVAVDLYSKAIDLDPNCAAF---FADRAQANIKIDNFTEAVVD 61

Query: 191 ANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPS 234
           AN+A+ + P   +AY+ +G A + ++ + +A+ +      + P+
Sbjct: 62  ANKAIELEPTLAKAYLRKGTACMKLEEYSTAKAALEKGASVAPN 102

BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|449439233|ref|XP_004137391.1| (PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus])

HSP 1 Score: 510.4 bits (1313), Expect = 1.9e-141
Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|659066299|ref|XP_008437609.1| (PREDICTED: uncharacterized protein LOC103482942 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 3.2e-133
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 1

Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDRS+VRLAL
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGD FLAMD FDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|296088006|emb|CBI35289.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1

Query: 1   MKGSVCFLCGS-LP-FLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGS 60
           MKG V FL  S +P  LP PN +  S +    SKR  + A+    E+RVC NRTCRRQGS
Sbjct: 36  MKGGVSFLNASPIPQLLPLPN-DRLSIARVYTSKRRRLRAEI---ELRVCVNRTCRRQGS 95

Query: 61  FHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQ 120
              LE L+ +A P++ V   GCLG+CGAGPN+  LPDG +VGHCGT ARAA++++     
Sbjct: 96  LQTLETLSGIASPDVAVKSCGCLGRCGAGPNLVALPDGVIVGHCGTAARAAEVMMSFVAG 155

Query: 121 DSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRL 180
           D+       SL ALALRKRA+ ELE  NFS+AELLLSQAIDLKP GGIHII+K RS  RL
Sbjct: 156 DAQG-----SLAALALRKRAENELEKNNFSEAELLLSQAIDLKPSGGIHIIYKVRSSARL 215

Query: 181 ALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSK 240
            +GN++GALEDANEAL +AP+Y EAYICQGDAFLAMD FD AE SYST LE+DPSIRRSK
Sbjct: 216 TMGNYAGALEDANEALTLAPRYPEAYICQGDAFLAMDQFDDAEKSYSTCLELDPSIRRSK 275

Query: 241 SFKARVAKLQEKLSAVRTQ 258
           SF+ARVAKLQEKLSA  T+
Sbjct: 276 SFRARVAKLQEKLSAASTR 285

BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|225457464|ref|XP_002265398.1| (PREDICTED: uncharacterized protein LOC100265105 [Vitis vinifera])

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1

Query: 1   MKGSVCFLCGS-LP-FLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGS 60
           MKG V FL  S +P  LP PN +  S +    SKR  + A+    E+RVC NRTCRRQGS
Sbjct: 1   MKGGVSFLNASPIPQLLPLPN-DRLSIARVYTSKRRRLRAEI---ELRVCVNRTCRRQGS 60

Query: 61  FHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQ 120
              LE L+ +A P++ V   GCLG+CGAGPN+  LPDG +VGHCGT ARAA++++     
Sbjct: 61  LQTLETLSGIASPDVAVKSCGCLGRCGAGPNLVALPDGVIVGHCGTAARAAEVMMSFVAG 120

Query: 121 DSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRL 180
           D+       SL ALALRKRA+ ELE  NFS+AELLLSQAIDLKP GGIHII+K RS  RL
Sbjct: 121 DAQG-----SLAALALRKRAENELEKNNFSEAELLLSQAIDLKPSGGIHIIYKVRSSARL 180

Query: 181 ALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSK 240
            +GN++GALEDANEAL +AP+Y EAYICQGDAFLAMD FD AE SYST LE+DPSIRRSK
Sbjct: 181 TMGNYAGALEDANEALTLAPRYPEAYICQGDAFLAMDQFDDAEKSYSTCLELDPSIRRSK 240

Query: 241 SFKARVAKLQEKLSAVRTQ 258
           SF+ARVAKLQEKLSA  T+
Sbjct: 241 SFRARVAKLQEKLSAASTR 250

BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|1021501031|ref|XP_016193731.1| (PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X1 [Arachis ipaensis])

HSP 1 Score: 297.4 bits (760), Expect = 2.5e-77
Identity = 146/219 (66.67%), Postives = 178/219 (81.28%), Query Frame = 1

Query: 38  AQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGF 97
           A  H QEIRVCTNRTCR+QGSF  LE L+ALAPPN+ VN  GCLG+CGAGPN+A+LPDGF
Sbjct: 31  AMAHAQEIRVCTNRTCRKQGSFQTLETLSALAPPNLAVNSCGCLGRCGAGPNLAILPDGF 90

Query: 98  VVGHCGTPARAADLIIQLSGQDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQA 157
           +V HCGTPA+AA L+  L  +D      + SLEALALRKRA+ E ++ N S+AELLLSQA
Sbjct: 91  IVAHCGTPAQAAQLVATLFSRDD--ADATSSLEALALRKRAEIEFQNRNLSEAELLLSQA 150

Query: 158 IDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHF 217
           ID +P GG+H++FK RS+VRL LGN+ GAL+DA EAL +AP+Y EAYICQGDAFLA++ F
Sbjct: 151 IDSEPFGGMHVLFKCRSVVRLELGNYRGALQDAREALNLAPRYSEAYICQGDAFLALNEF 210

Query: 218 DSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRT 257
           +SAE SY  +L+IDP IRRSKSFKAR+ KLQEK++AV T
Sbjct: 211 ESAEQSYLASLDIDPLIRRSKSFKARILKLQEKVAAVNT 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SGTB_HUMAN9.3e-0826.57Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sa... [more]
SGTA_RAT2.7e-0731.34Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus... [more]
SGTA_BOVIN2.7e-0731.40Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos ta... [more]
SGTA_HUMAN3.5e-0731.71Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo s... [more]
SGTA_MOUSE4.6e-0732.52Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus mu... [more]
Match NameE-valueIdentityDescription
A0A0A0LQA2_CUCSA1.3e-14199.61Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031840 PE=4 SV=1[more]
F6HVT9_VITVI1.3e-7762.93Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00600 PE=4 SV=... [more]
I1K580_SOYBN1.4e-7468.81Uncharacterized protein OS=Glycine max GN=GLYMA_05G249000 PE=4 SV=1[more]
A0A0B2PSF2_GLYSO1.4e-7468.81Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Glycine... [more]
A0A151TK34_CAJCA6.8e-7467.13Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Cajanus... [more]
Match NameE-valueIdentityDescription
AT3G17670.22.3e-6556.60 tetratricopeptide repeat (TPR)-containing protein[more]
AT1G12270.13.4e-0828.57 stress-inducible protein, putative[more]
AT1G04190.11.4e-0627.12 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G11260.12.4e-0628.85 phosphatase-related[more]
Match NameE-valueIdentityDescription
gi|449439233|ref|XP_004137391.1|1.9e-14199.61PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus][more]
gi|659066299|ref|XP_008437609.1|3.2e-13394.94PREDICTED: uncharacterized protein LOC103482942 [Cucumis melo][more]
gi|296088006|emb|CBI35289.3|1.9e-7762.93unnamed protein product [Vitis vinifera][more]
gi|225457464|ref|XP_002265398.1|1.9e-7762.93PREDICTED: uncharacterized protein LOC100265105 [Vitis vinifera][more]
gi|1021501031|ref|XP_016193731.1|2.5e-7766.67PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alph... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR012336Thioredoxin-like_fold
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G05220.1CSPI01G05220.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 131..248
score: 9.8
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 131..250
score: 1.3
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 42..101
score: 3.
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 45..112
score: 1.0
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 131..234
score: 18
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 167..200
score: 20.0coord: 131..164
score: 59.0coord: 201..234
score: 0
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 167..200
score: 6.166coord: 201..234
score: 9.381coord: 131..164
score: 6
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 112..256
score: 1.8
NoneNo IPR availablePANTHERPTHR22904:SF368TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 112..256
score: 1.8