CSPI01G05220 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATTGATATTGTTGATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCTGATCAATACATTATGTATGATGTCCTGCTTCAATTTGTTGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTGTACTAAGTTTGGTAACTATAGTTGAACTTATGGCGGTAAACACTGACAATTATTGTTGCTCGTCGATTTATCCTGCATGTTTCTAGCATTTGTATATTTCTGGACTTAAAAAATTGTTTGTAAATGTATTTGCTAAAGCAGATGCATCCAGAAAATATAGTTTCACAGAACTAGTAAATTTTCAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTATATATTCATTGTGTGCATTACATTTCATCTAAAAAAATTAGACGGTGGTTTCGAGAAAATAACTAGGCTGTTTACACTTCAACGAGTCTGGGTTGTGAATATAATCATTACTGAAGAGACATTGTTTGGAACTACCAACTGCGGAGAATACCTCAATATTTTCTACAAGGTTTTTTACTTATATTCCTATTTCTTCCACTCCAAATGTTTTTAAGCAGATTTGCGTAGCACTATACTTTCAGTGTCCACTAAAAGAAAATTTGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTCCCTGAGTCTTTGTGATGCTTGAATCTTTACATGTTAATATTATAATTGAATGCTAAGAAACAGTAATTGCGGTGGACAAGGTTAAAGAAGAAAAAGGAAAATAAATAGAAATCTTAGTTGAAAAGTCAAAAGACTGATGATGCTCAACTATAATTTAGAGGTCCTTCAAACATGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTCTTATCCTTCAATTGAAAAGATGTGAGAAGAAAGGATTCTTGCTCTAGAGTAGATTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATAGGAGCTTACTATGGGCAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGGATATTTGCTCCCCAACCAAGGATTTTATTTATTTTTTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATATTTAAGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTGTTGAGGACAAAATTCAATAATTTATTAATTAACTTTAAAAAAACTGTTTTCAAAATGTTGTTGACACTAATGACCGGTTTGTACCCGAGAACAACTTACTTTCTTCTTATAATAACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGAGTATTCATTTATGAACTTCTTTTAAATTCTTTTGATCCCAAGCCGGGCACAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCAATTAACACTTTCAATCATAAGATTTGTACCCTTTTGGAGTGATCCGTCCTTGTAATTTTACAAAATGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTGGGAGAAGGTTACATTTTAATATTTGCCCGCCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCGGAGATGTAGGTCAAGGAAGAAAGGTAACTAATGAAAACAGTTTGAGACTCTGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGCCTTTGAAATCTTCATTAGATTAAATACATACAAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAAAATGATTTTAATATCAGGGAAAATAGGCGAAGAAAAGCATCAGATAGTAAATGTTT ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGACCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.3e-08 Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 1
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07 Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 1
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07 Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 1
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.5e-07 Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 1
BLAST of CSPI01G05220 vs. Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 4.6e-07 Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 1
BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A0A0LQA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031840 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 1.3e-141 Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of CSPI01G05220 vs. TrEMBL
Match: F6HVT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00600 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77 Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1
BLAST of CSPI01G05220 vs. TrEMBL
Match: I1K580_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G249000 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74 Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 1
BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A0B2PSF2_GLYSO (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Glycine soja GN=glysoja_040667 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74 Identity = 150/218 (68.81%), Postives = 170/218 (77.98%), Query Frame = 1
BLAST of CSPI01G05220 vs. TrEMBL
Match: A0A151TK34_CAJCA (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Cajanus cajan GN=KK1_023753 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 6.8e-74 Identity = 145/216 (67.13%), Postives = 170/216 (78.70%), Query Frame = 1
BLAST of CSPI01G05220 vs. TAIR10
Match: AT3G17670.2 (AT3G17670.2 tetratricopeptide repeat (TPR)-containing protein) HSP 1 Score: 246.1 bits (627), Expect = 2.3e-65 Identity = 120/212 (56.60%), Postives = 157/212 (74.06%), Query Frame = 1
BLAST of CSPI01G05220 vs. TAIR10
Match: AT1G12270.1 (AT1G12270.1 stress-inducible protein, putative) HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08 Identity = 30/105 (28.57%), Postives = 54/105 (51.43%), Query Frame = 1
BLAST of CSPI01G05220 vs. TAIR10
Match: AT1G04190.1 (AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06 Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 1
BLAST of CSPI01G05220 vs. TAIR10
Match: AT4G11260.1 (AT4G11260.1 phosphatase-related) HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06 Identity = 30/104 (28.85%), Postives = 55/104 (52.88%), Query Frame = 1
BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|449439233|ref|XP_004137391.1| (PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus]) HSP 1 Score: 510.4 bits (1313), Expect = 1.9e-141 Identity = 256/257 (99.61%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|659066299|ref|XP_008437609.1| (PREDICTED: uncharacterized protein LOC103482942 [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 3.2e-133 Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 1
BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|296088006|emb|CBI35289.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77 Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1
BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|225457464|ref|XP_002265398.1| (PREDICTED: uncharacterized protein LOC100265105 [Vitis vinifera]) HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77 Identity = 163/259 (62.93%), Postives = 192/259 (74.13%), Query Frame = 1
BLAST of CSPI01G05220 vs. NCBI nr
Match: gi|1021501031|ref|XP_016193731.1| (PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X1 [Arachis ipaensis]) HSP 1 Score: 297.4 bits (760), Expect = 2.5e-77 Identity = 146/219 (66.67%), Postives = 178/219 (81.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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