Carg04731 (gene) Silver-seed gourd

Overview
NameCarg04731
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontetratricopeptide repeat protein 1
LocationCucurbita_argyrosperma_scaffold_028 : 646183 .. 649425 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGCCCTCGCACCTCCCACTATTACCGTCAATCCCTCTGGTTGCTTGGGGAAGTGCGGCGCTGGCCCTAACGTCGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGCGCCACGCCTGCTCGTGCTGCCGAGGTCATCATGCAATTGTCTGGTGGAGTTTCTGATTCTCTTGGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGTAAACTGTTCCGCCTTTTGCTGTGTGATCTCATTGATTAGTAAGTTTCCACTCTTCCTTCTTGGAACTTTGTTCAGAATAATACATTGTGTATGATGCCTTGATTCAATTTGTTGCAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCCACGTTGTATCTTATTGTATACAAATCGTCGACTATATTTCCTTCCAATAGTAAATTTGGTAACAATCGTTGAGTTTACGATAATTGTTAGTACTCATTCAATTTTAAGTCCCGAAGTTCTTCCCAAATGCTCTATGCTGTTGATTTTATCCTACGTCTCTCTAGCATTTGTTTACTTTTTTTTTTTTTCTTTATCTATATCTTTACTAAAGCAGCTGTATCCAAAAAATTTAGTTACACAGACTATTAAATTTTCAGGTCCATCGTCAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGTGAGAAGTATTTTAGTTAATCTCCATGTGCATTACATTCCATCTAAAAAATTAACTAGGCCGTTACACTTCAACGACGAAGGGAGAAAATGTTTGAAACTACCAATCTGGAGACCAGGTAGTAGTACCTCAAATTATTGACAAGATCTACGATAAATAGAGTTCCGATTTCTTCCACTTCAAATGTTCTTAAGCAGATTTGTATAGTGCCAAGCTCTAGGTGTCAAGAGCAAAAGAAAATTCGGAGGATAACAGAAAAACTTTGGACGTGAACATCATCTATAATTGTAAATTCGGGTATCAACTTTTTGTTGGGCTTCTTGAGTCTTTGTGATGCATGAATCTTTATGTTAGGATTAAAAATGAATACCACTCGATTTTAGTTTAAAATTTGCCAGGACACACATGGATGGATGTAAAGAAAAGAACTATGTTTAAAATTCAAAAGAAGGATGATGCTAAACTGTAATTTAGAGGTCCTTCGAACCCTCACCCAACTAATAAACAAGCAACCCTTCGAAGATCATTACAAATTCTTGTCCTTTAACCGGTAAGATATGGGAAAAAAGGAGTCTAGCCCTGGAGTAAATTATCGTAATGTTCCCTAGACATGTTTCCTAATTTTCAATTTTCAGGCTTACATTTGTCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTAATATGAGGAGACTATGGGCAATTTCATTTCTAGGACAAAAGAGCAACCGCTTCAATCCATCAATTTTCAGGAATTTTGCCTGATTCTTCTTCTTCTTTTCTTTCTAGTTTTTGTTTTGGAGGTAGCACTGGGAAACAAATGCAAAATGGTTTCCATTGAAATGTTGGTTGGAATTGGCTAGAAGAATTTTTATCGCTAATTTTTCTGTTTTTGAGGGAGAAATTCTTTATTTTTTTAAGTTAAAAAAAACATTTTCAAAATGTTGTTCTCGTTGATGACAAACCTATATTTCAGAACTACTTCAAACTTAATGACAAACCACTTAATTGAAGCGTTTGCCATCTAATTTTCTCACTTAACTCTTTCAAGCATACCCTTTTGAATATGTATTCTCGTCATTTTACAAAATATGATTGAATTCAGTTTTTGCCCAGTGCTGCTAGAATGCCCGTTCAATATTCATTTAATATTTGCACACCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGTGAGAACACAATAAAATCTGAGATGTGAATCAAGGAATAAGAATAATTGATGACAACAGTTCGAGATTCAGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGATTGTTGTTGAAATCTTATTAGGTTAACTACATAGAAATTCGATGCAGTTTGGAGTTTCATGAAAATTTGATTGGGAATTCGTACAATTCTGCATGAGAATGCTTTTGATCCCAGGAAATATAAGCGGCCAAGTGCATTGGATTGTAGAGTAATTGTTCCCCAATGGGTTATTTTATAGTGTCCTCCTCGTTCCTACCCTGCCACTATGGTCTTCGAGCTTAAAAAGAATGTCTAGAGATTAATAATTTTAAGAATTTTTAGGTTTGAGATAATTCCTAATCATTTTCATGTTGGAGGAAAAATCACGCAATTTCGCTATCTCACAGTCATTATTCTTAGGGCATGCACTCACATGGAGAAAGTGATTCCTAACATGAACAGGAAGATGGAAAATTTGATTTGGGATTCTGAAGTTTGCTTATAAATAGGATTGCTACTGGGCATGAATTAGTATAGCAGCCAAAGGGTTCGAGTCCATGGTTAATAGTGTTCAAAATTTTCAAATCAGAAACTTCTCTGCCAAACTTATTTTTCAAGTAAGCGAACACATTTCATTTCTTTGGATACAGATTAAGCAAATAAATACACACTTTGGCCCCTATCCCGAACTCTGCACTTGCTGATTTTTCTGCTTGGAATGTTTCTCTCTTGTGGCAATCTCAATGATAGGAAAACTTTATACATCTTCCATTACTTGCTTTCTCTATAATATTGTTCTTTCAACCGATGGAGTAGGTTTTGAAAGTGATTGATCAGGCTTTTGCCATTGAAATTGTCCCTTGACTTCCAGTAAATAGGAACCTCTGGGACTGGGCATTTTCCAAATGTCTTTCCAGGACTAAGAGCCTATTTGAAATGACTTCTTTCTAAGTATTAAATGCCAATCTTTTTTAAGTACTTGGAAACC

mRNA sequence

TTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTCAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGCTTACATTTGTCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGTGAGAACACAATAAAATCTGAGATGTGAATCAAGGAATAAGAATAATTGATGACAACAGTTCGAGATTCAGTCATTCCTTCAGGGCATGCACTCACATGGAGAAAGTGATTCCTAACATGAACAGGAAGATGGAAAATTTGATTTGGGATTCTGAAGTTTGCTTATAAATAGGATTGCTACTGGGCATGAATTAGTATAGCAGCCAAAGGGTTCGAGTCCATGGTTAATAGTGTTCAAAATTTTCAAATCAGAAACTTCTCTGCCAAACTTATTTTTCAAGTAAGCGAACACATTTCATTTCTTTGGATACAGATTAAGCAAATAAATACACACTTTGGCCCCTATCCCGAACTCTGCACTTGCTGATTTTTCTGCTTGGAATGTTTCTCTCTTGTGGCAATCTCAATGATAGGAAAACTTTATACATCTTCCATTACTTGCTTTCTCTATAATATTGTTCTTTCAACCGATGGAGTAGGTTTTGAAAGTGATTGATCAGGCTTTTGCCATTGAAATTGTCCCTTGACTTCCAGTAAATAGGAACCTCTGGGACTGGGCATTTTCCAAATGTCTTTCCAGGACTAAGAGCCTATTTGAAATGACTTCTTTCTAAGTATTAAATGCCAATCTTTTTTAAGTACTTGGAAACC

Coding sequence (CDS)

TTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTCAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGCTTACATTTGTCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGTGAGAACACAATAA

Protein sequence

FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLSVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIRRSKSFKARVAKLQEKLNAVRTQ
Homology
[Close]
BLAST of Carg04731 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 2.6e-79
Identity = 171/230 (74.35%), Postives = 172/230 (74.78%), Query Frame = 0 

Query: 1   FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLS--------------------- 60
           FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLS                     
Sbjct: 21  FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAG 80

Query: 61  -------------------------------------VSKSLEALALRKRAECEVEDGNF 120
                                                VSKSLEALALRKRAECEVEDGNF
Sbjct: 81  PNVAVLPDGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALRKRAECEVEDGNF 140

Query: 121 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ 173
           SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ
Sbjct: 141 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ 200

[Close]
BLAST of Carg04731 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 7.7e-79
Identity = 171/230 (74.35%), Postives = 171/230 (74.35%), Query Frame = 0 

Query: 1   FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLS--------------------- 60
           FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLS                     
Sbjct: 21  FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAG 80

Query: 61  -------------------------------------VSKSLEALALRKRAECEVEDGNF 120
                                                VSKSLEALAL KRAECEVEDGNF
Sbjct: 81  PNVAVLPDGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALWKRAECEVEDGNF 140

Query: 121 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ 173
           SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ
Sbjct: 141 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ 200

[Close]
BLAST of Carg04731 vs. NCBI nr
Match: XP_023001358.1 (uncharacterized protein LOC111495518 [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 7.2e-77
Identity = 166/230 (72.17%), Postives = 170/230 (73.91%), Query Frame = 0 

Query: 1   FSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLET----------------------- 60
           FSSTS+SLTPIRAQNQEIRVCTNRTCRRQGSFQTLET                       
Sbjct: 21  FSSTSVSLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLCALAPPTITVNPSGCLGKCGAG 80

Query: 61  -----------------------------------LSVSKSLEALALRKRAECEVEDGNF 120
                                              L VSKSLEALALRKRAECEVEDGNF
Sbjct: 81  PNVAVFPDGFVVGHCATPARAAEVIMRLSGGVSDSLGVSKSLEALALRKRAECEVEDGNF 140

Query: 121 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQ 173
           SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGN+A ALEDANEALRVAP+YPEAYICQ
Sbjct: 141 SQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNYAAALEDANEALRVAPQYPEAYICQ 200

[Close]
BLAST of Carg04731 vs. NCBI nr
Match: XP_004137391.1 (PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_1G031840 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 148/235 (62.98%), Postives = 164/235 (69.79%), Query Frame = 0 

Query: 1   FSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQTLETLS---------------- 60
           FSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF  LE L+                
Sbjct: 23  FSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLG 82

Query: 61  ------------------------------------------VSKSLEALALRKRAECEV 120
                                                     +SKSLEALALRKRA+CE+
Sbjct: 83  KCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCEL 142

Query: 121 EDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPE 173
           EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLALGNH+GALEDANEALRVAP+Y E
Sbjct: 143 EDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLE 202

[Close]
BLAST of Carg04731 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 4.5e-63
Identity = 148/235 (62.98%), Postives = 163/235 (69.36%), Query Frame = 0 

Query: 1   FSSTSISL---TPIRAQ--NQEIRVCTNRTCRRQGSFQTLETLS---------------- 60
           FSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LS                
Sbjct: 23  FSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLG 82

Query: 61  ------------------------------------------VSKSLEALALRKRAECEV 120
                                                     VSKSLEALALRKRA+CE+
Sbjct: 83  KCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCEL 142

Query: 121 EDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPE 173
           EDGNFSQA+LLLS+AI+L PCGGIHIIFKDRS+VRLALGNH+GALEDANEALRVAP+Y E
Sbjct: 143 EDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLE 202

[Close]
BLAST of Carg04731 vs. TAIR10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 162.2 bits (409), Expect = 2.9e-40
Identity = 93/214 (43.46%), Postives = 123/214 (57.48%), Query Frame = 0 

Query: 14  QNQEIRVCTNRTCRRQGSFQTLETL----------------------------------- 73
           Q +EIRVCTNRTCRRQGSFQ LETL                                   
Sbjct: 17  QVKEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILR 76

Query: 74  --------------------------SVSKSLEALALRKRAECEVEDGNFSQADLLLSKA 133
                                     +V+ +L ALAL   A  +++ GNFS+A+ LL++A
Sbjct: 77  HCATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQA 136

Query: 134 IELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHF 167
           +ELKP GG+H IFK RS+ +L + +++GALED ++AL +AP Y E YICQGDV+++   +
Sbjct: 137 LELKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQY 196

[Close]
BLAST of Carg04731 vs. TAIR10
Match: AT1G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 0 

Query: 35  LETLSVSKSLEALALRKRAECEVEDG--NFSQADLLLSKAIE--LKPCGGIHIIFKDRSI 94
           LE +S  K   A+  ++     V  G  ++S+A    +KAI   +       I+F +RS 
Sbjct: 20  LEAISALKESTAIEFKEEGNECVRKGKKHYSEAIDCYTKAISQGVLSDSETSILFSNRSH 79

Query: 95  VRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIR 154
           V L LGN+  AL DA E++R++P   +A        +S+D  + A+      +E DPS  
Sbjct: 80  VNLLLGNYRRALTDAEESMRLSPHNVKAVYRAAKASMSLDLLNEAKSYCEKGIENDPSNE 139

Query: 155 RSKSFKARV-AKLQEK 166
             K     V +K QEK
Sbjct: 140 DMKKLLKLVNSKKQEK 155

[Close]
BLAST of Carg04731 vs. Swiss-Prot
Match: sp|P15705|STI1_YEAST (Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=STI1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 36/126 (28.57%), Postives = 63/126 (50.00%), Query Frame = 0 

Query: 43  SLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGAL 102
           SL A   +++        ++ +A  L +KAIE+      H+++ +RS    +L   + AL
Sbjct: 2   SLTADEYKQQGNAAFTAKDYDKAIELFTKAIEVSETPN-HVLYSNRSACYTSLKKFSDAL 61

Query: 103 EDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIRRSKSFKARVAKL 162
            DANE +++ P + + Y   G   L +   D AE +Y  ALE+D S + +K    +V + 
Sbjct: 62  NDANECVKINPSWSKGYNRLGAAHLGLGDLDEAESNYKKALELDASNKAAKEGLDQVHRT 121

Query: 163 QEKLNA 169
           Q+   A
Sbjct: 122 QQARQA 126

[Close]
BLAST of Carg04731 vs. Swiss-Prot
Match: sp|P0CT30|SGT2_USTMA (Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_10205 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 29/98 (29.59%), Postives = 53/98 (54.08%), Query Frame = 0 

Query: 71  KAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMD 130
           KAIEL P   ++  F +R+     +G H  A++DA +A ++ P++ +AY   G    S  
Sbjct: 130 KAIELNPNSPVY--FSNRAAAFSQIGQHDSAIDDAKQASKIDPKFGKAYSRLGHALFSSG 189

Query: 131 HFDSAEMSYSTALEIDPSIRRSKSFKARVAKLQEKLNA 169
            +  A  +Y   +E+DPS   ++  K  +A  +E+L++
Sbjct: 190 RYQEAVEAYQKGVEVDPS---NEVLKKGLAASKEQLSS 222

[Close]
BLAST of Carg04731 vs. TrEMBL
Match: tr|A0A0A0LQA2|A0A0A0LQA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-64
Identity = 148/235 (62.98%), Postives = 164/235 (69.79%), Query Frame = 0 

Query: 1   FSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQTLETLS---------------- 60
           FSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF  LE L+                
Sbjct: 23  FSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLG 82

Query: 61  ------------------------------------------VSKSLEALALRKRAECEV 120
                                                     +SKSLEALALRKRA+CE+
Sbjct: 83  KCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCEL 142

Query: 121 EDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPE 173
           EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLALGNH+GALEDANEALRVAP+Y E
Sbjct: 143 EDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLE 202

[Close]
BLAST of Carg04731 vs. TrEMBL
Match: tr|A0A1S3AUF9|A0A1S3AUF9_CUCME (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.0e-63
Identity = 148/235 (62.98%), Postives = 163/235 (69.36%), Query Frame = 0 

Query: 1   FSSTSISL---TPIRAQ--NQEIRVCTNRTCRRQGSFQTLETLS---------------- 60
           FSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LS                
Sbjct: 23  FSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLG 82

Query: 61  ------------------------------------------VSKSLEALALRKRAECEV 120
                                                     VSKSLEALALRKRA+CE+
Sbjct: 83  KCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCEL 142

Query: 121 EDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPE 173
           EDGNFSQA+LLLS+AI+L PCGGIHIIFKDRS+VRLALGNH+GALEDANEALRVAP+Y E
Sbjct: 143 EDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLE 202

[Close]
BLAST of Carg04731 vs. TrEMBL
Match: tr|F6HVT9|F6HVT9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0053g00600 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 7.6e-51
Identity = 119/209 (56.94%), Postives = 134/209 (64.11%), Query Frame = 0 

Query: 17  EIRVCTNRTCRRQGSFQTLETLS------------------------------------- 76
           E+RVC NRTCRRQGS QTLETLS                                     
Sbjct: 81  ELRVCVNRTCRRQGSLQTLETLSGIASPDVAVKSCGCLGRCGAGPNLVALPDGVIVGHCG 140

Query: 77  ----------------VSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHI 136
                              SL ALALRKRAE E+E  NFS+A+LLLS+AI+LKP GGIHI
Sbjct: 141 TAARAAEVMMSFVAGDAQGSLAALALRKRAENELEKNNFSEAELLLSQAIDLKPSGGIHI 200

Query: 137 IFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTAL 173
           I+K RS  RL +GN+AGALEDANEAL +APRYPEAYICQGD FL+MD FD AE SYST L
Sbjct: 201 IYKVRSSARLTMGNYAGALEDANEALTLAPRYPEAYICQGDAFLAMDQFDDAEKSYSTCL 260

[Close]
BLAST of Carg04731 vs. TrEMBL
Match: tr|A0A2I4DMN1|A0A2I4DMN1_9ROSI (uncharacterized protein LOC108981612 OS=Juglans regia OX=51240 GN=LOC108981612 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.3e-49
Identity = 121/234 (51.71%), Postives = 140/234 (59.83%), Query Frame = 0 

Query: 3   STSISLTPIR----AQNQEIRVCTNRTCRRQGSFQTLETLS------------------- 62
           S S  + PIR    A+ QEIRVCTNRTCRRQGS QTL+TLS                   
Sbjct: 17  SASSEIQPIRHRIKAEIQEIRVCTNRTCRRQGSLQTLQTLSALAPPNVSVNSCGCLGRCG 76

Query: 63  ---------------------------------------------VSKSLEALALRKRAE 122
                                                            LEALALRKRAE
Sbjct: 77  AGPNLAAIPEDGGRVILVGHCGTPSRAAQVLVGLLSFGLDSDDGDAKTGLEALALRKRAE 136

Query: 123 CEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPR 169
            E + GN S A+ LLS+AI+LKP GGIH+++KDRSI RLALGN++GALEDA EAL +APR
Sbjct: 137 NESDMGNLSLAEQLLSQAIQLKPFGGIHVLYKDRSIARLALGNYSGALEDAREALTLAPR 196

[Close]
BLAST of Carg04731 vs. TrEMBL
Match: tr|I1K580|I1K580_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100813823 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 116/219 (52.97%), Postives = 134/219 (61.19%), Query Frame = 0 

Query: 10  PIRAQNQEIRVCTNRTCRRQGSFQTLETLS------------------------------ 69
           P++ + QEIRVCTNRTCRRQGSFQTLETLS                              
Sbjct: 18  PVKVKAQEIRVCTNRTCRRQGSFQTLETLSGLAPPNVAVKSCGCLGRCGGGPNLVVLPDG 77

Query: 70  ---------------------------VSKSLEALALRKRAECEVEDGNFSQADLLLSKA 129
                                          L+ALALRKRAE E    NF++A+LLLS+A
Sbjct: 78  LIVGHCGTAARAAEVIATLFAGAGGHDPKTCLDALALRKRAEIEFAKRNFTEAELLLSQA 137

Query: 130 IELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHF 172
           I+LKP GGIHI FK RS VRL LGN++GALEDA EAL +AP Y EAYICQGD FL+++ F
Sbjct: 138 IDLKPFGGIHITFKCRSFVRLELGNYSGALEDAEEALALAPGYSEAYICQGDAFLALNKF 197

The following BLAST results are available for this feature:
BLAST of Carg04731 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923908.12.6e-7974.35small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1... [more]
XP_023519354.17.7e-7974.35small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita... [more]
XP_023001358.17.2e-7772.17uncharacterized protein LOC111495518 [Cucurbita maxima][more]
XP_004137391.11.8e-6462.98PREDICTED: uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hy... [more]
XP_008437609.14.5e-6362.98PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo][more]
BLAST of Carg04731 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17670.22.9e-4043.46tetratricopeptide repeat (TPR)-containing protein[more]
AT1G04130.14.7e-0630.88Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg04731 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P15705|STI1_YEAST2.4e-0728.57Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... [more]
sp|P0CT30|SGT2_USTMA1.0e-0529.59Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago m... [more]
BLAST of Carg04731 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQA2|A0A0A0LQA2_CUCSA1.2e-6462.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1[more]
tr|A0A1S3AUF9|A0A1S3AUF9_CUCME3.0e-6362.98tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ... [more]
tr|F6HVT9|F6HVT9_VITVI7.6e-5156.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0053g00600 PE=4 SV=... [more]
tr|A0A2I4DMN1|A0A2I4DMN1_9ROSI9.3e-4951.71uncharacterized protein LOC108981612 OS=Juglans regia OX=51240 GN=LOC108981612 P... [more]
tr|I1K580|I1K580_SOYBN1.3e-4752.97Uncharacterized protein OS=Glycine max OX=3847 GN=100813823 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04731-RACarg04731-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availablePANTHERPTHR22904:SF368TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 10..39
coord: 41..170
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 10..39
coord: 41..170
NoneNo IPR availableCDDcd02980TRX_Fd_familycoord: 18..63
e-value: 0.00564973
score: 32.2141
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 46..79
e-value: 190.0
score: 3.6
coord: 82..115
e-value: 23.0
score: 11.7
coord: 116..149
e-value: 0.0037
score: 26.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 116..149
score: 10.148
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 82..115
score: 5.841
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 46..79
score: 6.903
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 39..172
e-value: 8.8E-19
score: 69.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 45..166
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 46..149
score: 18.154