Lsi11G015490 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G015490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	GPI-anchored protein LORELEI
Location	chr11 : 23841338 .. 23843778 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAATCCAAATACCCTTTTTACCAGAAAAACTCAACTATTATTGCTTTGATTATTCAAAGCCGTTTGCAGGCGGAGACAAAAAGCTCCACCGCCAACGGCTGCCGGAGATACCCAAAATTTTGAAGAGCCATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTGTAATTTTGTTTCCCCATTTTTTCATTCCTTTTTTCTTTTTTTAAATAATTTTTGGGGTTTTGATTTGTTTTTTATTTATGGATTTGCAGATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTAAGCCCTTTACTATTTATTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTCCAATGACAAAAGAAAATCCCATTTCCAGTTTTGGGCTTTTCTGATAAATGGGAGGCTTGTTTGGTTTGTGTTCAAAAATGGATTTTACGAAGGAGAGGCAAAATGTTATAGTAATGAGGATGAATTTGGAGAAAAATTATAACTTAGTATGTGAATTTCCTCTATGAATTTTCAAAATTACAAATTAATTAGTCTCTAAATTTTTTAATTCTTTCAAAATTAAAAGTTTAGAAAGATACATTTGAAAGGTTAGAGACTATAAACACTTTCGAAAGTGAAGAAACCAAACCGACACAAATCTCAAACTTTATAGTTTATGGACTAAAATTATAATTTAACCGAATATTTAAATCTAACATGTTCATAGCATATTTTTTTTTTATCTAGGGGAACTTGAATTTATTGATGTGAGCATTATTTACTCTTTTCATTGAGATTGGAATTTTTGTCTCACATCTTTTATACTAAACGAAAGCAAGGTTGTCTCACTTAGTCATTAATTCATATTTGGTAGTTCCCTAAAATTAATACAAGGTTTAACAAGTGATTGTCAATAATAAAATTAAATTTTAAGATTAAATTGTAGGATTAATGCCAAGTTGGGTGGTGTCTAATAAATTCATAAACATTCAGTTTTTAGTACAACAATTATGGGGTAGGGAATTGAACATCTTATCATTAAGGACGGACATGTCAATACCACTGAGCAAGCTCACTTTGGCAATTCATAAATATTCAATTTTATATATAATATGTTTTTAGAATTTTAATCCTATCAAATCTTTGATTTATTAAATATTATTGTAAAGTTTAGAGATCACATATTTTTTAGGTTTTTAATTTAGAGGGTTATTAGACACAATCCTCGCACGAACTTTGGAATTTTAGCCGGAATTAGTAGGCCTATATAATCATATTACAACATAGCATAAGGTTTAAACTACTACTACCACTGAATCATCAAAGTGAGCATACGTTAGCGGTAATTAACATCTACCCCTTCCCTTGAGGTAGAATGTTCAAATTACCACCCCTTTAAGCCAAACTAAACATAGGTTAGCAGTAATTAACATGTAAATGTACTCCTTCCCTTGAAGTTGGAAATTCAAATTACCACCCCTTTAAGCCACGAGGAGTATAGTTTTAGTGGTAATTGACATGTATTTCTTCTCTTGAAATCGAAGGTTCAAATCTCAGATTCTTTTAACCCAAAGTGAGTATAGCAGTGAGTCTAACTCAATAGTAATTGATATATATTCTTTCTTTTGAGATCAGAAGTTCAAATTACCATTTTTTAAAATTAAAATGAACATTATTTAGTGGTAATTAACATGTAAATCCGTTTTTGGATATTGACAGGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAGAATACAAAAGTAACCACCACCCCTTCATTATCATCTTGCTTATATTCCAAAGCTTTCAAATCTCTCTGTTATGTTCTGTTTGTTTGATGGATTCACTATATAACAATTAACATCAAACTTGGTGGGATTTGGGAAAAAGAAACCTGAATTTGTTTTGTTTTTATTGGTTAAATTACAAAGTTTAGTTCCAGAACTTTTAGGTTTGTATCTAAATATTTTTAAAACTTTCAATTTTGTGTCGGATGAATCTAATAGATTTTTTTTGCTTATTC

mRNA sequence

TCAAAATCCAAATACCCTTTTTACCAGAAAAACTCAACTATTATTGCTTTGATTATTCAAAGCCGTTTGCAGGCGGAGACAAAAAGCTCCACCGCCAACGGCTGCCGGAGATACCCAAAATTTTGAAGAGCCATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAGAATACAAAAGTAACCACCACCCCTTCATTATCATCTTGCTTATATTCCAAAGCTTTCAAATCTCTCTGTTATGTTCTGTTTGTTTGATGGATTCACTATATAACAATTAACATCAAACTTGGTGGGATTTGGGAAAAAGAAACCTGAATTTGTTTTGTTTTTATTGGTTAAATTACAAAGTTTAGTTCCAGAACTTTTAGGTTTGTATCTAAATATTTTTAAAACTTTCAATTTTGTGTCGGATGAATCTAATAGATTTTTTTTGCTTATTC

Coding sequence (CDS)

ATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAG

Protein sequence

MALNQKHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLLF

Homology

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BLAST of Lsi11G015490 vs. Swiss-Prot
Match: LRE_ARATH (GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1


Query: 9   LYFALLFLFIAFAYSHSPFLSYEALKAG-KFTGRSLLQAKKSCPVDMEGQNYTILTSKCK 68
           L+F L+ L ++ + S S  +S    ++    +GR+L  AKK C V+ E  +Y +LT +CK
Sbjct: 6   LFFFLMALLVSLSSSSS--ISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCK 65

Query: 69  GPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQG 128
           GP +P   CC A  EF C +V ++NDM ++CA+TMFSY+N+YG YP GLFAN+C+E + G
Sbjct: 66  GPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDG 125

Query: 129 LSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
           L C            + AS++ S+    PR  SL ++ A A   +L L
Sbjct: 126 LVCP---LPPLYSHNLNASTADST----PRFISLLISAATAVFALLVL 164

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BLAST of Lsi11G015490 vs. TrEMBL
Match: A0A0A0K5Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047960 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.5e-77
Identity = 153/177 (86.44%), Postives = 162/177 (91.53%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YFALLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKKSCPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFALLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKSCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP ALCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPAALCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+ GLSCD ALKAQAEKA+IKASS+ASSLLT  RL S    LALA TF+LYLL
Sbjct: 121 QCKEGKDGLSCDNALKAQAEKAQIKASSAASSLLTPRRLPS----LALASTFILYLL 173

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BLAST of Lsi11G015490 vs. TrEMBL
Match: A0A0B2RL44_GLYSO (GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_042326 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-40
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C VD E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVDFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

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BLAST of Lsi11G015490 vs. TrEMBL
Match: K7KY94_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G293300 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C V+ E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVEFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

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BLAST of Lsi11G015490 vs. TrEMBL
Match: V7AGE2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G114300g PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38
Identity = 74/122 (60.66%), Postives = 96/122 (78.69%), Query Frame = 1


Query: 10  YFALLFLFI-AFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKG 69
           + ++L+ F+ A   S +P +S +  ++G  TGR+LLQAKK+C VD E QNYT+LTS+CKG
Sbjct: 7   FSSILYCFLLATLASAAPLISDDIFESGASTGRALLQAKKACAVDFENQNYTVLTSQCKG 66

Query: 70  PQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGL 129
           PQYPP +CCEA  +F C F DE+ND+TTNCAE MFSYIN+YG+YPPGLFAN+CK G+ GL
Sbjct: 67  PQYPPKVCCEAFKQFACPFADEINDLTTNCAEVMFSYINIYGKYPPGLFANECKGGEIGL 126

Query: 130 SC 131
            C
Sbjct: 127 EC 128

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BLAST of Lsi11G015490 vs. TrEMBL
Match: A0A0B2RJH3_GLYSO (GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_025816 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.4e-38
Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +   A   TGR+LLQAKK+C VD E QNYT+LTS+CKGPQYP
Sbjct: 17  LYFFLLATLVSSAPFLSDDIFGAEASTGRALLQAKKACGVDFENQNYTVLTSQCKGPQYP 76

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+C+  MFSYIN+YG+YPPGLFAN+CKEG QGL C  
Sbjct: 77  PKVCCEAFKQFACPFANEINDMTTDCSSVMFSYINIYGKYPPGLFANECKEGNQGLDC-- 136

Query: 133 ALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
              +Q + A    SS+   +   P   SL + +A    F+ +L
Sbjct: 137 ---SQVKPANTSTSSNTIHVAAPPHFFSL-MTIAAFLGFLFHL 173

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BLAST of Lsi11G015490 vs. TAIR10
Match: AT5G56170.1 (AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1)

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-38
Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = 1


Query: 11  FALLFLFIAFAYSHSPFLSYEALKAGKFT-GRSLLQAKKSCPVDMEGQNYTILTSKCKGP 70
           F  L L +  ++S S F+S    ++     GR+LLQ KK+CPV+ E  NYTI+TSKCKGP
Sbjct: 9   FFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKGP 68

Query: 71  QYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLS 130
           +YPP  CC A  +F C + D+LND++++CA TMFSYINLYG+YPPGLFANQCKEG++GL 
Sbjct: 69  KYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGLE 128

Query: 131 CDKALKAQAE-KAEIKASSSASSLL 154
           C    +   E  AE+ A++++SS L
Sbjct: 129 CPAGSQLPPETSAEVNAATTSSSRL 153

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BLAST of Lsi11G015490 vs. TAIR10
Match: AT4G28280.2 (AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 3)

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-35
Identity = 73/149 (48.99%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 7   HCLYFALLFLFIA-FAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSK 66
           HCL   L  L ++ FA+SH   +S +  ++   T R+LLQAK +C  D   +NYTI+TSK
Sbjct: 6   HCLVSLLSILLLSGFAFSHH--ISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSK 65

Query: 67  CKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQ 126
           CKGP YP  +CC A  +F C F + LND  T+CA TMFSYINLYG+YPPG+FAN CKEG+
Sbjct: 66  CKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGK 125

Query: 127 QGLSCDKALKAQAEKAEIKASSSASSLLT 155
           +GL C       +  A I   S+   L+T
Sbjct: 126 EGLDCTDVTPTSSSHASIPLVSTHVLLIT 152

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BLAST of Lsi11G015490 vs. TAIR10
Match: AT2G20700.1 (AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 2)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 70/147 (47.62%), Postives = 93/147 (63.27%), Query Frame = 1


Query: 7   HCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKC 66
           +CL  +LL +F+   +S    LSY+       T R+LLQ + +C  D   +NYTI+TS+C
Sbjct: 6   YCL-LSLLPIFLLSGFS----LSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRC 65

Query: 67  KGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQ 126
           KGP YP  +CC A  +F C F + LND   +CA TMFSYINLYG+YPPG+FAN CKEG++
Sbjct: 66  KGPNYPANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKE 125

Query: 127 GLSC-DKALKAQAEKAEIKASSSASSL 153
           GL C D    A A    I  +S+ +SL
Sbjct: 126 GLDCTDVTQSASATSDSIPRASTTASL 147

[Close]

BLAST of Lsi11G015490 vs. TAIR10
Match: AT4G26466.1 (AT4G26466.1 lorelei)

HSP 1 Score: 114.0 bits (284), Expect = 9.4e-26
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1


Query: 9   LYFALLFLFIAFAYSHSPFLSYEALKAG-KFTGRSLLQAKKSCPVDMEGQNYTILTSKCK 68
           L+F L+ L ++ + S S  +S    ++    +GR+L  AKK C V+ E  +Y +LT +CK
Sbjct: 6   LFFFLMALLVSLSSSSS--ISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCK 65

Query: 69  GPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQG 128
           GP +P   CC A  EF C +V ++NDM ++CA+TMFSY+N+YG YP GLFAN+C+E + G
Sbjct: 66  GPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDG 125

Query: 129 LSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
           L C            + AS++ S+    PR  SL ++ A A   +L L
Sbjct: 126 LVCP---LPPLYSHNLNASTADST----PRFISLLISAATAVFALLVL 164

[Close]

BLAST of Lsi11G015490 vs. NCBI nr
Match: gi|449438492|ref|XP_004137022.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 6.5e-77
Identity = 153/177 (86.44%), Postives = 162/177 (91.53%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YFALLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKKSCPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFALLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKSCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP ALCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPAALCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+ GLSCD ALKAQAEKA+IKASS+ASSLLT  RL S    LALA TF+LYLL
Sbjct: 121 QCKEGKDGLSCDNALKAQAEKAQIKASSAASSLLTPRRLPS----LALASTFILYLL 173

[Close]

BLAST of Lsi11G015490 vs. NCBI nr
Match: gi|659110626|ref|XP_008455326.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 153/178 (85.96%), Postives = 164/178 (92.13%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YF LLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKK+CPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFPLLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKNCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP  LCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPATLCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASS-LLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+QGLSCDKAL+AQAEKAEIKA+SSASS LLT PRL    L+LALA TF+LYLL
Sbjct: 121 QCKEGKQGLSCDKALQAQAEKAEIKAASSASSTLLTPPRL----LSLALASTFILYLL 174

[Close]

BLAST of Lsi11G015490 vs. NCBI nr
Match: gi|828339326|ref|XP_012567715.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cicer arietinum])

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S SPFLS +    G  TGR+LLQAKK+C VD E QNYTILTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSSPFLSDDIFDNGASTGRALLQAKKACGVDFENQNYTILTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  EF C F DE+NDMTT+CA  MFSYIN+YG+YPPGLFAN+CKEG++GL C +
Sbjct: 71  PKVCCEAFKEFACPFSDEINDMTTDCATVMFSYINIYGKYPPGLFANECKEGKEGLDCSQ 130

[Close]

BLAST of Lsi11G015490 vs. NCBI nr
Match: gi|734409287|gb|KHN35256.1| (GPI-anchored protein LORELEI [Glycine soja])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C VD E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVDFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

[Close]

BLAST of Lsi11G015490 vs. NCBI nr
Match: gi|356515252|ref|XP_003526315.1| (PREDICTED: GPI-anchored protein LORELEI-like [Glycine max])

HSP 1 Score: 169.9 bits (429), Expect = 4.1e-39
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C V+ E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVEFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

The following BLAST results are available for this feature:

BLAST of Lsi11G015490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRE_ARATH	1.7e-24	39.88	GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1	[more]

BLAST of Lsi11G015490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Q4_CUCSA	4.5e-77	86.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047960 PE=4 SV=1	[more]
A0A0B2RL44_GLYSO	9.8e-40	63.33	GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_042326 PE=4 SV=1	[more]
K7KY94_SOYBN	2.9e-39	62.50	Uncharacterized protein OS=Glycine max GN=GLYMA_06G293300 PE=4 SV=1	[more]
V7AGE2_PHAVU	3.2e-38	60.66	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G114300g PE=4 SV=1	[more]
A0A0B2RJH3_GLYSO	5.4e-38	52.15	GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_025816 PE=4 SV=1	[more]

BLAST of Lsi11G015490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56170.1	3.7e-38	52.41	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT4G28280.2	3.8e-35	48.99	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT2G20700.1	1.8e-32	47.62	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G26466.1	9.4e-26	39.88	lorelei	[more]

BLAST of Lsi11G015490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438492\|ref\|XP_004137022.1\|	6.5e-77	86.44	PREDICTED: GPI-anchored protein LORELEI-like [Cucumis sativus]	[more]
gi\|659110626\|ref\|XP_008455326.1\|	1.4e-76	85.96	PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo]	[more]
gi\|828339326\|ref\|XP_012567715.1\|	2.2e-40	65.83	PREDICTED: GPI-anchored protein LORELEI-like [Cicer arietinum]	[more]
gi\|734409287\|gb\|KHN35256.1\|	1.4e-39	63.33	GPI-anchored protein LORELEI [Glycine soja]	[more]
gi\|356515252\|ref\|XP_003526315.1\|	4.1e-39	62.50	PREDICTED: GPI-anchored protein LORELEI-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0090406	pollen tube
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G015490.1	Lsi11G015490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31533	FAMILY NOT NAMED	coord: 1..175 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G015490	Csa7G047960	Cucumber (Chinese Long) v2	culsiB494
Lsi11G015490	CSPI07G04600	Wild cucumber (PI 183967)	cpilsiB505
Lsi11G015490	Cucsa.147690	Cucumber (Gy14) v1	cgylsiB237
Lsi11G015490	CmaCh11G018750	Cucurbita maxima (Rimu)	cmalsiB091
Lsi11G015490	CmoCh11G019520	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G015490	Cla002276	Watermelon (97103) v1	lsiwmB097
Lsi11G015490	MELO3C018739	Melon (DHL92) v3.5.1	lsimeB095
Lsi11G015490	ClCG07G002940	Watermelon (Charleston Gray)	lsiwcgB114
Lsi11G015490	MELO3C018739.2	Melon (DHL92) v3.6.1	lsimedB101
Lsi11G015490	Cla97C07G131280	Watermelon (97103) v2	lsiwmbB101
Lsi11G015490	Bhi05G001616	Wax gourd	lsiwgoB116
Lsi11G015490	Cp4.1LG04g03110	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G015490	CsGy7G004190	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G015490	Carg19120	Silver-seed gourd	carlsiB659
Lsi11G015490	CsaV3_7G004400	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G015490	Wax gourd	lsiwgoB129
Lsi11G015490	Bottle gourd (USVL1VR-Ls)	lsilsiB024
Lsi11G015490	Cucumber (Gy14) v1	cgylsiB179
Lsi11G015490	Cucurbita maxima (Rimu)	cmalsiB198
Lsi11G015490	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G015490	Cucurbita maxima (Rimu)	cmalsiB561
Lsi11G015490	Cucurbita moschata (Rifu)	cmolsiB188
Lsi11G015490	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G015490	Cucurbita moschata (Rifu)	cmolsiB544
Lsi11G015490	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G015490	Cucurbita pepo (Zucchini)	cpelsiB606
Lsi11G015490	Wild cucumber (PI 183967)	cpilsiB434
Lsi11G015490	Cucumber (Chinese Long) v2	culsiB430
Lsi11G015490	Melon (DHL92) v3.5.1	lsimeB087
Lsi11G015490	Watermelon (Charleston Gray)	lsiwcgB092
Lsi11G015490	Watermelon (97103) v1	lsiwmB103
Lsi11G015490	Cucumber (Gy14) v2	cgyblsiB395
Lsi11G015490	Melon (DHL92) v3.6.1	lsimedB091
Lsi11G015490	Silver-seed gourd	carlsiB795
Lsi11G015490	Cucumber (Chinese Long) v3	cuclsiB457
Lsi11G015490	Watermelon (97103) v2	lsiwmbB083