CsGy7G004190 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGACCCTTTTTTAGCAATACCTTTAGAAAAGAATTCTCCTTTTTTCATGCAAAATTTCCCTCTCCTCCCTACAAATCCCTCTCTTTTTCTCCCCCATCCATTTCCAAACAAATTCAAAATCCATAAAAATAAAAAATATTTGGTTTGATTATCGTAAGCCGTTTGCAGGCGGAGACAGAAAGCTCCACCGCCAACGGCTACCGGAGAGAACACAAAGTTTAGAAGAGAAGAGAAATGGCATTGAATCAACATTCTTATTGCTCCTATTTTGCCCTTCTCTTCCTTTTCCTTGCCTTTGCTTACTCTCACTCCCCATTTCTCTCCTGTATTTTTCTTTCCCCTTTTTTCTTATTCTATATTCTTTTAAATTTTAGGATTTTTTTTTTTTTTTTATACTTTTCTTTTGATTTATGGATTTGCAGATGAGGCACTCAAATCTGGGCAATTTACTGGGCGCTCCCTTCTTCAGGCCAAAAAGAGTAAGCCCTTCGTAAAAATATTTGTAATTAAATGGAAGGTTTAGAAACACAAATAGAGACACGAAGAATCTCAAAGTATTTGAAAGTAAACAAACATAGTTTAGTTTATTTGAAACCATTTTTGTGATGGGTATGGACAGGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTAAATACCCAGCAGCACTCTGTTGTGAGGCATTGTTGGAATTTTGCTGTGGGTTTGTTGATGAATTAAATGACATGACCAACAATTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGAAAGATGGTCTTTCTTGTGACAATGCCCTCAAAGCCCAGGCCGAGAAAGCCCAGATCAAAGCTTCTTCTGCTGCTTCGTCTCTACTAACTCCACGCCGACTCCCTTCTCTCGCTCTCGCTTCTACCTTTATACTCTATTTGTTGTTATAGAATGCAAAAGTAACCACAACCACCACCCCCTTCGTTATCATAACTTGCTTATATAATGCCAATGCCAAGGCCGTCTCAAACCTCTCTTGTGTTCTGTTTGTTTGATGGATTTTCTGTATAACTATTAACATCCAACTTGGTGGGATTTGGGTAAAGAAACTTAAATTTATTTTATATTTCTTTTGTTATATTACAAATTGAGTTCGATTCTCAAA TTTTGACCCTTTTTTAGCAATACCTTTAGAAAAGAATTCTCCTTTTTTCATGCAAAATTTCCCTCTCCTCCCTACAAATCCCTCTCTTTTTCTCCCCCATCCATTTCCAAACAAATTCAAAATCCATAAAAATAAAAAATATTTGGTTTGATTATCGTAAGCCGTTTGCAGGCGGAGACAGAAAGCTCCACCGCCAACGGCTACCGGAGAGAACACAAAGTTTAGAAGAGAAGAGAAATGGCATTGAATCAACATTCTTATTGCTCCTATTTTGCCCTTCTCTTCCTTTTCCTTGCCTTTGCTTACTCTCACTCCCCATTTCTCTCCTATGAGGCACTCAAATCTGGGCAATTTACTGGGCGCTCCCTTCTTCAGGCCAAAAAGAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTAAATACCCAGCAGCACTCTGTTGTGAGGCATTGTTGGAATTTTGCTGTGGGTTTGTTGATGAATTAAATGACATGACCAACAATTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGAAAGATGGTCTTTCTTGTGACAATGCCCTCAAAGCCCAGGCCGAGAAAGCCCAGATCAAAGCTTCTTCTGCTGCTTCGTCTCTACTAACTCCACGCCGACTCCCTTCTCTCGCTCTCGCTTCTACCTTTATACTCTATTTGTTGTTATAGAATGCAAAAGTAACCACAACCACCACCCCCTTCGTTATCATAACTTGCTTATATAATGCCAATGCCAAGGCCGTCTCAAACCTCTCTTGTGTTCTGTTTGTTTGATGGATTTTCTGTATAACTATTAACATCCAACTTGGTGGGATTTGGGTAAAGAAACTTAAATTTATTTTATATTTCTTTTGTTATATTACAAATTGAGTTCGATTCTCAAA ATGGCATTGAATCAACATTCTTATTGCTCCTATTTTGCCCTTCTCTTCCTTTTCCTTGCCTTTGCTTACTCTCACTCCCCATTTCTCTCCTATGAGGCACTCAAATCTGGGCAATTTACTGGGCGCTCCCTTCTTCAGGCCAAAAAGAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTAAATACCCAGCAGCACTCTGTTGTGAGGCATTGTTGGAATTTTGCTGTGGGTTTGTTGATGAATTAAATGACATGACCAACAATTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGAAAGATGGTCTTTCTTGTGACAATGCCCTCAAAGCCCAGGCCGAGAAAGCCCAGATCAAAGCTTCTTCTGCTGCTTCGTCTCTACTAACTCCACGCCGACTCCCTTCTCTCGCTCTCGCTTCTACCTTTATACTCTATTTGTTGTTATAG MALNQHSYCSYFALLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPKYPAALCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFANQCKEGKDGLSCDNALKAQAEKAQIKASSAASSLLTPRRLPSLALASTFILYLLL
BLAST of CsGy7G004190 vs. NCBI nr
Match: XP_004137022.1 (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis sativus] >KGN43612.1 hypothetical protein Csa_7G047960 [Cucumis sativus]) HSP 1 Score: 345.9 bits (886), Expect = 8.0e-92 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. NCBI nr
Match: XP_016901694.1 (PREDICTED: GPI-anchored protein LORELEI-like isoform X2 [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 3.6e-84 Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. NCBI nr
Match: XP_016901693.1 (PREDICTED: GPI-anchored protein LORELEI-like isoform X1 [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 3.6e-84 Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. NCBI nr
Match: XP_016901695.1 (PREDICTED: GPI-anchored protein LORELEI-like isoform X3 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67 Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 0
BLAST of CsGy7G004190 vs. NCBI nr
Match: XP_022988974.1 (GPI-anchored protein LLG2-like [Cucurbita maxima]) HSP 1 Score: 211.5 bits (537), Expect = 2.4e-51 Identity = 113/166 (68.07%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of CsGy7G004190 vs. TAIR10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-37 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 0
BLAST of CsGy7G004190 vs. TAIR10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3) HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35 Identity = 75/155 (48.39%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of CsGy7G004190 vs. TAIR10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-34 Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 0
BLAST of CsGy7G004190 vs. TAIR10
Match: AT4G26466.1 (lorelei) HSP 1 Score: 125.6 bits (314), Expect = 3.1e-29 Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 0
BLAST of CsGy7G004190 vs. Swiss-Prot
Match: sp|Q9FKT1|LLG1_ARATH (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.9e-36 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 0
BLAST of CsGy7G004190 vs. Swiss-Prot
Match: sp|Q9M0I0|LLG3_ARATH (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34 Identity = 75/155 (48.39%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of CsGy7G004190 vs. Swiss-Prot
Match: sp|Q6NLF4|LLG2_ARATH (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.6e-33 Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 0
BLAST of CsGy7G004190 vs. Swiss-Prot
Match: sp|B3GS44|LRE_ARATH (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.6e-28 Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 0
BLAST of CsGy7G004190 vs. TrEMBL
Match: tr|A0A0A0K5Q4|A0A0A0K5Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047960 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 5.3e-92 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. TrEMBL
Match: tr|A0A1S4E0F2|A0A1S4E0F2_CUCME (GPI-anchored protein LORELEI-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.4e-84 Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. TrEMBL
Match: tr|A0A1S4E0D8|A0A1S4E0D8_CUCME (GPI-anchored protein LORELEI-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.4e-84 Identity = 163/175 (93.14%), Postives = 168/175 (96.00%), Query Frame = 0
BLAST of CsGy7G004190 vs. TrEMBL
Match: tr|A0A1S4E132|A0A1S4E132_CUCME (GPI-anchored protein LORELEI-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.6e-67 Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 0
BLAST of CsGy7G004190 vs. TrEMBL
Match: tr|A0A1S3DW88|A0A1S3DW88_CICAR (GPI-anchored protein LORELEI-like OS=Cicer arietinum OX=3827 GN=LOC101506411 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.0e-39 Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |