Lsi11G015490.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G015490.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	GPI-anchored protein LORELEI
Location	chr11 : 23841338 .. 23843778 (+)
Sequence length	938

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAATCCAAATACCCTTTTTACCAGAAAAACTCAACTATTATTGCTTTGATTATTCAAAGCCGTTTGCAGGCGGAGACAAAAAGCTCCACCGCCAACGGCTGCCGGAGATACCCAAAATTTTGAAGAGCCATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTGTAATTTTGTTTCCCCATTTTTTCATTCCTTTTTTCTTTTTTTAAATAATTTTTGGGGTTTTGATTTGTTTTTTATTTATGGATTTGCAGATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTAAGCCCTTTACTATTTATTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTCCAATGACAAAAGAAAATCCCATTTCCAGTTTTGGGCTTTTCTGATAAATGGGAGGCTTGTTTGGTTTGTGTTCAAAAATGGATTTTACGAAGGAGAGGCAAAATGTTATAGTAATGAGGATGAATTTGGAGAAAAATTATAACTTAGTATGTGAATTTCCTCTATGAATTTTCAAAATTACAAATTAATTAGTCTCTAAATTTTTTAATTCTTTCAAAATTAAAAGTTTAGAAAGATACATTTGAAAGGTTAGAGACTATAAACACTTTCGAAAGTGAAGAAACCAAACCGACACAAATCTCAAACTTTATAGTTTATGGACTAAAATTATAATTTAACCGAATATTTAAATCTAACATGTTCATAGCATATTTTTTTTTTATCTAGGGGAACTTGAATTTATTGATGTGAGCATTATTTACTCTTTTCATTGAGATTGGAATTTTTGTCTCACATCTTTTATACTAAACGAAAGCAAGGTTGTCTCACTTAGTCATTAATTCATATTTGGTAGTTCCCTAAAATTAATACAAGGTTTAACAAGTGATTGTCAATAATAAAATTAAATTTTAAGATTAAATTGTAGGATTAATGCCAAGTTGGGTGGTGTCTAATAAATTCATAAACATTCAGTTTTTAGTACAACAATTATGGGGTAGGGAATTGAACATCTTATCATTAAGGACGGACATGTCAATACCACTGAGCAAGCTCACTTTGGCAATTCATAAATATTCAATTTTATATATAATATGTTTTTAGAATTTTAATCCTATCAAATCTTTGATTTATTAAATATTATTGTAAAGTTTAGAGATCACATATTTTTTAGGTTTTTAATTTAGAGGGTTATTAGACACAATCCTCGCACGAACTTTGGAATTTTAGCCGGAATTAGTAGGCCTATATAATCATATTACAACATAGCATAAGGTTTAAACTACTACTACCACTGAATCATCAAAGTGAGCATACGTTAGCGGTAATTAACATCTACCCCTTCCCTTGAGGTAGAATGTTCAAATTACCACCCCTTTAAGCCAAACTAAACATAGGTTAGCAGTAATTAACATGTAAATGTACTCCTTCCCTTGAAGTTGGAAATTCAAATTACCACCCCTTTAAGCCACGAGGAGTATAGTTTTAGTGGTAATTGACATGTATTTCTTCTCTTGAAATCGAAGGTTCAAATCTCAGATTCTTTTAACCCAAAGTGAGTATAGCAGTGAGTCTAACTCAATAGTAATTGATATATATTCTTTCTTTTGAGATCAGAAGTTCAAATTACCATTTTTTAAAATTAAAATGAACATTATTTAGTGGTAATTAACATGTAAATCCGTTTTTGGATATTGACAGGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAGAATACAAAAGTAACCACCACCCCTTCATTATCATCTTGCTTATATTCCAAAGCTTTCAAATCTCTCTGTTATGTTCTGTTTGTTTGATGGATTCACTATATAACAATTAACATCAAACTTGGTGGGATTTGGGAAAAAGAAACCTGAATTTGTTTTGTTTTTATTGGTTAAATTACAAAGTTTAGTTCCAGAACTTTTAGGTTTGTATCTAAATATTTTTAAAACTTTCAATTTTGTGTCGGATGAATCTAATAGATTTTTTTTGCTTATTC

mRNA sequence

TCAAAATCCAAATACCCTTTTTACCAGAAAAACTCAACTATTATTGCTTTGATTATTCAAAGCCGTTTGCAGGCGGAGACAAAAAGCTCCACCGCCAACGGCTGCCGGAGATACCCAAAATTTTGAAGAGCCATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAGAATACAAAAGTAACCACCACCCCTTCATTATCATCTTGCTTATATTCCAAAGCTTTCAAATCTCTCTGTTATGTTCTGTTTGTTTGATGGATTCACTATATAACAATTAACATCAAACTTGGTGGGATTTGGGAAAAAGAAACCTGAATTTGTTTTGTTTTTATTGGTTAAATTACAAAGTTTAGTTCCAGAACTTTTAGGTTTGTATCTAAATATTTTTAAAACTTTCAATTTTGTGTCGGATGAATCTAATAGATTTTTTTTGCTTATTC

Coding sequence (CDS)

ATGGCGTTGAATCAAAAGCATTGCCTCTATTTTGCCCTTCTCTTCCTTTTCATTGCCTTCGCTTACTCTCACTCCCCATTCCTCTCTTATGAAGCACTCAAAGCTGGTAAATTTACTGGGCGTTCCCTTCTCCAGGCCAAAAAAAGTTGCCCAGTAGACATGGAAGGGCAGAATTACACAATCCTAACAAGCAAATGCAAAGGCCCTCAATACCCACCAGCACTCTGTTGCGAGGCATTGTTGGAATTTTGCTGTGGCTTTGTTGATGAATTAAACGATATGACCACCAACTGTGCTGAGACAATGTTTAGTTACATAAATCTCTATGGCCAATACCCTCCTGGCCTCTTTGCCAATCAATGCAAAGAAGGGCAACAAGGTCTTTCTTGTGACAAAGCCCTCAAAGCCCAGGCCGAGAAAGCCGAAATTAAAGCTTCTTCTTCCGCTTCGTCTCTACTAACTCGACCCCGACTCTGTTCTCTTTCTCTCGCTCTTGCTCTCGCTCCCACCTTTATGCTCTATTTGTTGTTTTAG

Protein sequence

MALNQKHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLLF

Homology

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BLAST of Lsi11G015490.1 vs. Swiss-Prot
Match: LRE_ARATH (GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1


Query: 9   LYFALLFLFIAFAYSHSPFLSYEALKAG-KFTGRSLLQAKKSCPVDMEGQNYTILTSKCK 68
           L+F L+ L ++ + S S  +S    ++    +GR+L  AKK C V+ E  +Y +LT +CK
Sbjct: 6   LFFFLMALLVSLSSSSS--ISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCK 65

Query: 69  GPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQG 128
           GP +P   CC A  EF C +V ++NDM ++CA+TMFSY+N+YG YP GLFAN+C+E + G
Sbjct: 66  GPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDG 125

Query: 129 LSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
           L C            + AS++ S+    PR  SL ++ A A   +L L
Sbjct: 126 LVCP---LPPLYSHNLNASTADST----PRFISLLISAATAVFALLVL 164

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BLAST of Lsi11G015490.1 vs. TrEMBL
Match: A0A0A0K5Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047960 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.5e-77
Identity = 153/177 (86.44%), Postives = 162/177 (91.53%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YFALLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKKSCPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFALLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKSCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP ALCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPAALCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+ GLSCD ALKAQAEKA+IKASS+ASSLLT  RL S    LALA TF+LYLL
Sbjct: 121 QCKEGKDGLSCDNALKAQAEKAQIKASSAASSLLTPRRLPS----LALASTFILYLL 173

[Close]

BLAST of Lsi11G015490.1 vs. TrEMBL
Match: A0A0B2RL44_GLYSO (GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_042326 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-40
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C VD E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVDFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

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BLAST of Lsi11G015490.1 vs. TrEMBL
Match: K7KY94_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G293300 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C V+ E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVEFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

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BLAST of Lsi11G015490.1 vs. TrEMBL
Match: V7AGE2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G114300g PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38
Identity = 74/122 (60.66%), Postives = 96/122 (78.69%), Query Frame = 1


Query: 10  YFALLFLFI-AFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKG 69
           + ++L+ F+ A   S +P +S +  ++G  TGR+LLQAKK+C VD E QNYT+LTS+CKG
Sbjct: 7   FSSILYCFLLATLASAAPLISDDIFESGASTGRALLQAKKACAVDFENQNYTVLTSQCKG 66

Query: 70  PQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGL 129
           PQYPP +CCEA  +F C F DE+ND+TTNCAE MFSYIN+YG+YPPGLFAN+CK G+ GL
Sbjct: 67  PQYPPKVCCEAFKQFACPFADEINDLTTNCAEVMFSYINIYGKYPPGLFANECKGGEIGL 126

Query: 130 SC 131
            C
Sbjct: 127 EC 128

[Close]

BLAST of Lsi11G015490.1 vs. TrEMBL
Match: A0A0B2RJH3_GLYSO (GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_025816 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.4e-38
Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +   A   TGR+LLQAKK+C VD E QNYT+LTS+CKGPQYP
Sbjct: 17  LYFFLLATLVSSAPFLSDDIFGAEASTGRALLQAKKACGVDFENQNYTVLTSQCKGPQYP 76

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+C+  MFSYIN+YG+YPPGLFAN+CKEG QGL C  
Sbjct: 77  PKVCCEAFKQFACPFANEINDMTTDCSSVMFSYINIYGKYPPGLFANECKEGNQGLDC-- 136

Query: 133 ALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
              +Q + A    SS+   +   P   SL + +A    F+ +L
Sbjct: 137 ---SQVKPANTSTSSNTIHVAAPPHFFSL-MTIAAFLGFLFHL 173

[Close]

BLAST of Lsi11G015490.1 vs. TAIR10
Match: AT5G56170.1 (AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1)

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-38
Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = 1


Query: 11  FALLFLFIAFAYSHSPFLSYEALKAGKFT-GRSLLQAKKSCPVDMEGQNYTILTSKCKGP 70
           F  L L +  ++S S F+S    ++     GR+LLQ KK+CPV+ E  NYTI+TSKCKGP
Sbjct: 9   FFFLLLSVLSSFSSSSFISDGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKGP 68

Query: 71  QYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLS 130
           +YPP  CC A  +F C + D+LND++++CA TMFSYINLYG+YPPGLFANQCKEG++GL 
Sbjct: 69  KYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEGLE 128

Query: 131 CDKALKAQAE-KAEIKASSSASSLL 154
           C    +   E  AE+ A++++SS L
Sbjct: 129 CPAGSQLPPETSAEVNAATTSSSRL 153

[Close]

BLAST of Lsi11G015490.1 vs. TAIR10
Match: AT4G28280.2 (AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 3)

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-35
Identity = 73/149 (48.99%), Postives = 95/149 (63.76%), Query Frame = 1


Query: 7   HCLYFALLFLFIA-FAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSK 66
           HCL   L  L ++ FA+SH   +S +  ++   T R+LLQAK +C  D   +NYTI+TSK
Sbjct: 6   HCLVSLLSILLLSGFAFSHH--ISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSK 65

Query: 67  CKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQ 126
           CKGP YP  +CC A  +F C F + LND  T+CA TMFSYINLYG+YPPG+FAN CKEG+
Sbjct: 66  CKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMCKEGK 125

Query: 127 QGLSCDKALKAQAEKAEIKASSSASSLLT 155
           +GL C       +  A I   S+   L+T
Sbjct: 126 EGLDCTDVTPTSSSHASIPLVSTHVLLIT 152

[Close]

BLAST of Lsi11G015490.1 vs. TAIR10
Match: AT2G20700.1 (AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 2)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 70/147 (47.62%), Postives = 93/147 (63.27%), Query Frame = 1


Query: 7   HCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKC 66
           +CL  +LL +F+   +S    LSY+       T R+LLQ + +C  D   +NYTI+TS+C
Sbjct: 6   YCL-LSLLPIFLLSGFS----LSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRC 65

Query: 67  KGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQ 126
           KGP YP  +CC A  +F C F + LND   +CA TMFSYINLYG+YPPG+FAN CKEG++
Sbjct: 66  KGPNYPANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMCKEGKE 125

Query: 127 GLSC-DKALKAQAEKAEIKASSSASSL 153
           GL C D    A A    I  +S+ +SL
Sbjct: 126 GLDCTDVTQSASATSDSIPRASTTASL 147

[Close]

BLAST of Lsi11G015490.1 vs. TAIR10
Match: AT4G26466.1 (AT4G26466.1 lorelei)

HSP 1 Score: 114.0 bits (284), Expect = 9.4e-26
Identity = 67/168 (39.88%), Postives = 100/168 (59.52%), Query Frame = 1


Query: 9   LYFALLFLFIAFAYSHSPFLSYEALKAG-KFTGRSLLQAKKSCPVDMEGQNYTILTSKCK 68
           L+F L+ L ++ + S S  +S    ++    +GR+L  AKK C V+ E  +Y +LT +CK
Sbjct: 6   LFFFLMALLVSLSSSSS--ISDGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCK 65

Query: 69  GPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQG 128
           GP +P   CC A  EF C +V ++NDM ++CA+TMFSY+N+YG YP GLFAN+C+E + G
Sbjct: 66  GPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDG 125

Query: 129 LSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYL 176
           L C            + AS++ S+    PR  SL ++ A A   +L L
Sbjct: 126 LVCP---LPPLYSHNLNASTADST----PRFISLLISAATAVFALLVL 164

[Close]

BLAST of Lsi11G015490.1 vs. NCBI nr
Match: gi|449438492|ref|XP_004137022.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 6.5e-77
Identity = 153/177 (86.44%), Postives = 162/177 (91.53%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YFALLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKKSCPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFALLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKSCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP ALCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPAALCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASSLLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+ GLSCD ALKAQAEKA+IKASS+ASSLLT  RL S    LALA TF+LYLL
Sbjct: 121 QCKEGKDGLSCDNALKAQAEKAQIKASSAASSLLTPRRLPS----LALASTFILYLL 173

[Close]

BLAST of Lsi11G015490.1 vs. NCBI nr
Match: gi|659110626|ref|XP_008455326.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 153/178 (85.96%), Postives = 164/178 (92.13%), Query Frame = 1


Query: 1   MALNQ-KHCLYFALLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNY 60
           MALNQ  +C YF LLFLF+AFAYSHSPFLSYEALK+G+FTGRSLLQAKK+CPVDMEGQNY
Sbjct: 1   MALNQHSYCSYFPLLFLFLAFAYSHSPFLSYEALKSGQFTGRSLLQAKKNCPVDMEGQNY 60

Query: 61  TILTSKCKGPQYPPALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFAN 120
           TILTSKCKGP+YP  LCCEALLEFCCGFVDELNDMT NCAETMFSYINLYGQYPPGLFAN
Sbjct: 61  TILTSKCKGPKYPATLCCEALLEFCCGFVDELNDMTNNCAETMFSYINLYGQYPPGLFAN 120

Query: 121 QCKEGQQGLSCDKALKAQAEKAEIKASSSASS-LLTRPRLCSLSLALALAPTFMLYLL 177
           QCKEG+QGLSCDKAL+AQAEKAEIKA+SSASS LLT PRL    L+LALA TF+LYLL
Sbjct: 121 QCKEGKQGLSCDKALQAQAEKAEIKAASSASSTLLTPPRL----LSLALASTFILYLL 174

[Close]

BLAST of Lsi11G015490.1 vs. NCBI nr
Match: gi|828339326|ref|XP_012567715.1| (PREDICTED: GPI-anchored protein LORELEI-like [Cicer arietinum])

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S SPFLS +    G  TGR+LLQAKK+C VD E QNYTILTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSSPFLSDDIFDNGASTGRALLQAKKACGVDFENQNYTILTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  EF C F DE+NDMTT+CA  MFSYIN+YG+YPPGLFAN+CKEG++GL C +
Sbjct: 71  PKVCCEAFKEFACPFSDEINDMTTDCATVMFSYINIYGKYPPGLFANECKEGKEGLDCSQ 130

[Close]

BLAST of Lsi11G015490.1 vs. NCBI nr
Match: gi|734409287|gb|KHN35256.1| (GPI-anchored protein LORELEI [Glycine soja])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C VD E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVDFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

[Close]

BLAST of Lsi11G015490.1 vs. NCBI nr
Match: gi|356515252|ref|XP_003526315.1| (PREDICTED: GPI-anchored protein LORELEI-like [Glycine max])

HSP 1 Score: 169.9 bits (429), Expect = 4.1e-39
Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 13  LLFLFIAFAYSHSPFLSYEALKAGKFTGRSLLQAKKSCPVDMEGQNYTILTSKCKGPQYP 72
           L F  +A   S +PFLS +  ++G  TGR+LLQAKK+C V+ E +NYT+LTS+CKGPQYP
Sbjct: 11  LYFFLLATLVSSAPFLSDDIFESGASTGRALLQAKKACGVEFENKNYTVLTSQCKGPQYP 70

Query: 73  PALCCEALLEFCCGFVDELNDMTTNCAETMFSYINLYGQYPPGLFANQCKEGQQGLSCDK 132
           P +CCEA  +F C F +E+NDMTT+CA  MFSYIN+YG+YPPGLFANQCKEG QGL C +
Sbjct: 71  PKVCCEAFKQFACPFSNEVNDMTTDCATVMFSYINIYGKYPPGLFANQCKEGNQGLDCSQ 130

The following BLAST results are available for this feature:

BLAST of Lsi11G015490.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRE_ARATH	1.7e-24	39.88	GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1	[more]

BLAST of Lsi11G015490.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Q4_CUCSA	4.5e-77	86.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047960 PE=4 SV=1	[more]
A0A0B2RL44_GLYSO	9.8e-40	63.33	GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_042326 PE=4 SV=1	[more]
K7KY94_SOYBN	2.9e-39	62.50	Uncharacterized protein OS=Glycine max GN=GLYMA_06G293300 PE=4 SV=1	[more]
V7AGE2_PHAVU	3.2e-38	60.66	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G114300g PE=4 SV=1	[more]
A0A0B2RJH3_GLYSO	5.4e-38	52.15	GPI-anchored protein LORELEI OS=Glycine soja GN=glysoja_025816 PE=4 SV=1	[more]

BLAST of Lsi11G015490.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56170.1	3.7e-38	52.41	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT4G28280.2	3.8e-35	48.99	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT2G20700.1	1.8e-32	47.62	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G26466.1	9.4e-26	39.88	lorelei	[more]

BLAST of Lsi11G015490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438492\|ref\|XP_004137022.1\|	6.5e-77	86.44	PREDICTED: GPI-anchored protein LORELEI-like [Cucumis sativus]	[more]
gi\|659110626\|ref\|XP_008455326.1\|	1.4e-76	85.96	PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo]	[more]
gi\|828339326\|ref\|XP_012567715.1\|	2.2e-40	65.83	PREDICTED: GPI-anchored protein LORELEI-like [Cicer arietinum]	[more]
gi\|734409287\|gb\|KHN35256.1\|	1.4e-39	63.33	GPI-anchored protein LORELEI [Glycine soja]	[more]
gi\|356515252\|ref\|XP_003526315.1\|	4.1e-39	62.50	PREDICTED: GPI-anchored protein LORELEI-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G015490	Lsi11G015490	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015490.1.five_prime_UTR.1	Lsi11G015490.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015490.1.CDS.1	Lsi11G015490.1.CDS.1	CDS
Lsi11G015490.1.CDS.2	Lsi11G015490.1.CDS.2	CDS
Lsi11G015490.1.CDS.3	Lsi11G015490.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015490.1.three_prime_UTR.1	Lsi11G015490.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G015490.1	Lsi11G015490.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31533	FAMILY NOT NAMED	coord: 1..175 score: 9.8