Lsi11G010320 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G010320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEmbryo defective 1273 protein, putative
Locationchr11 : 17679695 .. 17683304 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTGTGATCCCCGAGTTAGTGGGTGAGATTTTGAGAGCTTGGTTTATAGCTTTCGATAATGCATTTGTTTTGGTTTCCATTGTGGATGAAGTTAATTAGTAATTGAGAAACTATGTTGATTGAATTGATGGAAGAACCTTGTTATGAATTTGTGGGTGATGGTGATTGGTGATTTGAAAACTCAATTTGAAGGAAGATGGTGTTGCTGTGAAGGAAAGGAGGTATAGACTTATCTGTTTTAGCTTCTTATTGCCATGAATGAAAGGAGGGACCATTCAAGAGGGAAGAGTGCGGATGGTAGTTATCATAGGGGTGTATCCATGTGGTTATATAGAATGATTAAGTTTATCCCAGCTTATTAGCTTAAATTTTTGGGTTTAGTGTTAGTTGAATGTAATGATAATGTAGGGGCTCTCAGTTCAAACTCTTATCATGGTATTTCCTCTTTATTCCACTTTAATGGTCTATGTATTGAACTTTCTGAATTGAATTAATATCCAAGTCTAATTAGAAATGGATTGAATTTGCTTTAGTTTGTCAACTAATTTTTGTGGGTGAAGTGGTAATTTAGTCAATGAAATGAAGAATAGATAATGCATCTTCTGCTTTTAAATTTTAGCTTGTGCAGTGTTTAACATTTCTGTGATGGATTTGCATTTTATTTAATGGATTTTCTACAACTTTTGTTGACTGTCAAACGGACTTGAGGCACCTTGCTTACCTGTTGCCTTTTCCTTTTCCTAATTCCTATGCTTTCAACTTAATCCTTACATCCAAATTTATATGTCAAGACATTGATGGTTGAGTCATGTTATCTTGAGCAATTTGTTTACAAAATTTATTCTTATTGTAGCGTTGGTCACCAAAATGCGGCCACGTAGTGAGTTTAAAACCACATAAAAGATTTCAGAATGCTAGATCTGTGGTCTCTTGTGCTATGAATATGACTGCAGGACAATCAGATGATTCAGGAAGGGTAAGTTGGGATAGTTTGAAGGACATGGTAAAAAAGCTTTGGGACAGCTCGCCAGAGCCCGTGAAGTGCTTCCCTTGGAATGAGGCATTGGATAACTTCATCCAGCTTATTGCTGATCTCATCTTGACCGTTATCAAATACTTGTGTGTACCATTACTCGTCGTTACCTCCGTTAGCGAGATGTCCTACTGTGCTCATGAAAAGAAGCTTCTTCTTGTCCCATTTCCGTTTATAATTGGCTTCTCTGTTGCTGAGGCCATGAGACAGACAGCTTTAAGTCTATCTCCAATTCTTAAGGTAAGATTTCAGCATCACATCTCCATTATGCAAGACGCTAGTCGAATGGATCGTCATGATGGTTTATTGACGGAGCATTGGTCTTATATCCTCCATTTTAGTTATGTTTTTATGTCATCCTTATTGAAGCTTTGACAATAACATTTTCTACTATTTATGGATTAGTTAAATAACTCCTATTTACGTGTGAGGCAATTGAAAATAATTTCTAGTTACTAATGAAATAAATTTGAAAAGAATTTCAACTATCTGATGTAGCACTTGTTATTTCATTTTGCATGTTTTTAGTTAACTCCTCCATGTTCTTTGTTGTCTTTGTAGCATTTTTCATTTTGAACGATAGTCATTTTCGAAATGCTATTAGCTAGGAATGCTTGAACACGTTTTATTAGTCTTCCCATTGCTTATTTTTCTTTGAAACACACTCTAAAGCTTGCCCTTAAGTAGGAATACAATTTAAAGAGCTGTTTGAAGTTCTTCACTGACTTCTAGTTTCCTACAATCTACATTGTCTATGACTTATGAGGAAACCTTTTCATCTTGGATGCCTTAAATTGTAGTGGCAAGTAGCAATAATGATCTGTGGGGGAAATTCAGTAGGCTGGTGAGGCATTGTCCTATTAGTAATGGATGAATTCCTCTTCTGAACATTTCTTTACATTTTTTTTTTCCTGAAATAGAGTGGCAAGTTAAAAGATTTTTCGTTTCTATTAACCACCATTTTTCTTTTTTTCCAGGATCTAGAAGTGCCATGGCATTTGATCACCATTGCAATATTCTTCACCCTCATTAAACTGCCTGGCCCGTACTATCCATATTGGGGTCGCATATTCATTCCCCATTTGGCAAATGGAGGTTTGTTCAGAACTTTATGGTCTTTGTTTCTCTGGTTTAGAAGACCCCGAAAGACATCAATGTTGCTGAAGCACAACAAGAATCACCTGGATACGAAGAATAATTAATCGAAAAGGCATAGAGAACATTGGACCAGGTATTACTACTCCGGAGAGAAAGAAAAAGAAAAATACAGTAGCTCAATGCTTGTTAGATCTAATTTCATTCTCATGCCCCCCTATGTGAGGACTAATTATGACTTGGGTCTTGGGTGCCTCAAATACTGAGGCCAAATTTAGTAGTAGCTTTCTGACAGGAATGCTATTGGTAATAATCAGTAATATTAGGGTATCAAAGGTATGTCAATAATTAGTTATGGGAGTTGTTATCGTGAGTGGGAAAAGGTAAAGCGTAAAGGTATGGACTGATTTAGTTGGTTTAGGCTTGAGCGATCTCAAGAGAGGGAGGGTTCAAGTACCACAATTTTATTTTATTATTATTTTTTCTTAAAAAAAAATTTGGAGTTCAACATGTGGAGGTAGGGGATCTGAACCTCTAGCTGAGGATTTATGCTTGAAGCAGTTAAACTATGCTTAGGTTGATTGTAATTCTTTATTTTTTATATTTCAATATCGTCTTAGTTTTGTTTGGGTTCTATCATTTTGTCTCATGTCAGTAACTGGATAACGTGAGAATTTGTTGTCAAATAAGATTCTTGTTCTTTATCGATGAATTGTAACAAATACAAACTAAGAGACGAATGAGATAGTTTCTGAAAAGGGAAAAAAATGGTTAAACAGAAATGCGATAAACATCATCACCATATTTGTATTGTTTTACATTTGTGTAATGAGATTCGATTATCTGGGACTAGCAGATGCATTTTGTTCAATGCTTGAAATTTTACATTCTTGTCTAAGTAGGATTTCTTGGCATGTCTTGCAATCCTGTTCTCCTTCCATTGTAAAAACGATGTCAATCAATTATCCTTTTTCTTGTGCAGATGACATTGCTGGCTTCATCAGAATGAAGTGATCAATCGAGCAAGCGAGTGAGCGAACTGGTCGAGATCTTCTTATAGCACGAGACCAACTCTGCTTCATTGAAGGATCATTTTCCCAATAGACAGTTCCAGATAAGCTTTAAATGAAGCCCAATGTATTTCCAATTTTCTCAAATTTTCTTTCTTTCATGTAGCACTGAAAGTTTTGGAGGCTGTGTTTACACTTCAATTCCTTCCTAAACTTTTAAGACAATTAGTAAGAATGGTGTGTGAGAACACCCGTAAAACAACTCCACACCACGACAATTTTTTGCTCATTGTGGGGTGGAAAATTGAACTGAGACCATTGATATGGTAATTGGTGGCTTTATCTCCAAAATTATGCTTGGATGGACCACAATTGTAAGTGATGCATTAAAAAATATTGGTTCAAATACCAATTTGGTTCGTATACTTGGAAGTTTGTTCAATTTTAGTTCATGTATTTTAAAATTTTC

mRNA sequence

TTTTCTGTGATCCCCGAGTTAGTGGGTGAGATTTTGAGAGCTTGGTTTATAGCTTTCGATAATGCATTTGTTTTGGTTTCCATTGTGGATGAACGTTGGTCACCAAAATGCGGCCACGTAGTGAGTTTAAAACCACATAAAAGATTTCAGAATGCTAGATCTGTGGTCTCTTGTGCTATGAATATGACTGCAGGACAATCAGATGATTCAGGAAGGGTAAGTTGGGATAGTTTGAAGGACATGGTAAAAAAGCTTTGGGACAGCTCGCCAGAGCCCGTGAAGTGCTTCCCTTGGAATGAGGCATTGGATAACTTCATCCAGCTTATTGCTGATCTCATCTTGACCGTTATCAAATACTTGTGTGTACCATTACTCGTCGTTACCTCCGTTAGCGAGATGTCCTACTGTGCTCATGAAAAGAAGCTTCTTCTTGTCCCATTTCCGTTTATAATTGGCTTCTCTGTTGCTGAGGCCATGAGACAGACAGCTTTAAGTCTATCTCCAATTCTTAAGGATCTAGAAGTGCCATGGCATTTGATCACCATTGCAATATTCTTCACCCTCATTAAACTGCCTGGCCCGTACTATCCATATTGGGGTCGCATATTCATTCCCCATTTGGCAAATGGAGGTTTGTTCAGAACTTTATGGTCTTTGTTTCTCTGGTTTAGAAGACCCCGAAAGACATCAATGTTGCTGAAGCACAACAAGAATCACCTGGATACGAAGAATAATTAATCGAAAAGGCATAGAGAACATTGGACCAGATGACATTGCTGGCTTCATCAGAATGAAGTGATCAATCGAGCAAGCGAGTGAGCGAACTGGTCGAGATCTTCTTATAGCACGAGACCAACTCTGCTTCATTGAAGGATCATTTTCCCAATAGACAGTTCCAGATAAGCTTTAAATGAAGCCCAATGTATTTCCAATTTTCTCAAATTTTCTTTCTTTCATGTAGCACTGAAAGTTTTGGAGGCTGTGTTTACACTTCAATTCCTTCCTAAACTTTTAAGACAATTAGTAAGAATGGTGTGTGAGAACACCCGTAAAACAACTCCACACCACGACAATTTTTTGCTCATTGTGGGGTGGAAAATTGAACTGAGACCATTGATATGGTAATTGGTGGCTTTATCTCCAAAATTATGCTTGGATGGACCACAATTGTAAGTGATGCATTAAAAAATATTGGTTCAAATACCAATTTGGTTCGTATACTTGGAAGTTTGTTCAATTTTAGTTCATGTATTTTAAAATTTTC

Coding sequence (CDS)

TTTTCTGTGATCCCCGAGTTAGTGGGTGAGATTTTGAGAGCTTGGTTTATAGCTTTCGATAATGCATTTGTTTTGGTTTCCATTGTGGATGAACGTTGGTCACCAAAATGCGGCCACGTAGTGAGTTTAAAACCACATAAAAGATTTCAGAATGCTAGATCTGTGGTCTCTTGTGCTATGAATATGACTGCAGGACAATCAGATGATTCAGGAAGGGTAAGTTGGGATAGTTTGAAGGACATGGTAAAAAAGCTTTGGGACAGCTCGCCAGAGCCCGTGAAGTGCTTCCCTTGGAATGAGGCATTGGATAACTTCATCCAGCTTATTGCTGATCTCATCTTGACCGTTATCAAATACTTGTGTGTACCATTACTCGTCGTTACCTCCGTTAGCGAGATGTCCTACTGTGCTCATGAAAAGAAGCTTCTTCTTGTCCCATTTCCGTTTATAATTGGCTTCTCTGTTGCTGAGGCCATGAGACAGACAGCTTTAAGTCTATCTCCAATTCTTAAGGATCTAGAAGTGCCATGGCATTTGATCACCATTGCAATATTCTTCACCCTCATTAAACTGCCTGGCCCGTACTATCCATATTGGGGTCGCATATTCATTCCCCATTTGGCAAATGGAGGTTTGTTCAGAACTTTATGGTCTTTGTTTCTCTGGTTTAGAAGACCCCGAAAGACATCAATGTTGCTGAAGCACAACAAGAATCACCTGGATACGAAGAATAATTAA

Protein sequence

FSVIPELVGEILRAWFIAFDNAFVLVSIVDERWSPKCGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWFRRPRKTSMLLKHNKNHLDTKNN
Homology
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BLAST of Lsi11G010320 vs. TrEMBL
Match: A0A0A0K6P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074900 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.3e-105
Identity = 189/218 (86.70%), Postives = 201/218 (92.20%), Query Frame = 1 

Query: 28  IVDERWSPKCGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWD 87
           +   R SP+C HVVSLKPHKRFQNA SVVSCA NMTAGQSDDSGRV+WDSLK+ VK+LW+
Sbjct: 26  LAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSGRVNWDSLKNRVKQLWE 85

Query: 88  SSPEPVKCFPWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPF 147
           SSPEPVK FPWNEALDNFIQLIADLILTVIKYL VPLL+VTS+SEMSYCAHEKKLL+VPF
Sbjct: 86  SSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLSEMSYCAHEKKLLIVPF 145

Query: 148 PFIIGFSVAEAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHL 207
            FIIGFS AE MRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGP YPYWGRIFIPHL
Sbjct: 146 LFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPSYPYWGRIFIPHL 205

Query: 208 ANGGLFRTLWSLFLWFRRPRKTSMLLKHNKNHLDTKNN 246
           ANGGL RT WS+FLWFRRP+KTSMLLKHN+NHLDTK N
Sbjct: 206 ANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]
BLAST of Lsi11G010320 vs. TrEMBL
Match: A0A067L2F1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04887 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-73
Identity = 136/209 (65.07%), Postives = 164/209 (78.47%), Query Frame = 1 

Query: 37  CGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCF 96
           C H +S+KP++ FQN +  VSCA+NM AGQS D  +  ++ L    +KLWDS P+PVK F
Sbjct: 44  CSHSLSVKPNQIFQNTKLNVSCAINMAAGQSGDPEKFQFEHLSSKARKLWDSCPQPVKSF 103

Query: 97  PWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVA 156
           PWN AL+NFIQLI DL++ VIKYLCVPLL V+S+SEMSYCAH+KKL  VPFP +IG +VA
Sbjct: 104 PWNRALENFIQLILDLVVAVIKYLCVPLLAVSSLSEMSYCAHQKKLFYVPFPLLIGIAVA 163

Query: 157 EAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTL 216
            A++ TAL LSP LKD EVPWHLI IAIFFTLIKLPGP YPYWGRIF+PH+ANG L+RTL
Sbjct: 164 GALKDTALELSPRLKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTL 223

Query: 217 WSLFLWFRRPRKTSMLLKHNKNHLDTKNN 246
           WS FLWFRRPRK S  +   +N  D+ N+
Sbjct: 224 WSAFLWFRRPRKGSGAVL-QQNSADSSNS 251

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BLAST of Lsi11G010320 vs. TrEMBL
Match: W9R0W6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026898 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.2e-69
Identity = 126/187 (67.38%), Postives = 148/187 (79.14%), Query Frame = 1 

Query: 44  KPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALD 103
           K +   QN    + CA+NM AG+S+D  + + D L D  +KLW+SSP+PVK FPWN  LD
Sbjct: 49  KSYGLVQNPVPNIFCAINMAAGRSNDPEKTNLDHLMDKARKLWESSPQPVKSFPWNRTLD 108

Query: 104 NFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTA 163
           NFIQL  DLIL V+KYL VPLLVVTS+SEMSYCAHE+KL LVPFP  +G +VA  +RQTA
Sbjct: 109 NFIQLTLDLILAVVKYLSVPLLVVTSLSEMSYCAHERKLKLVPFPIFLGIAVAGVLRQTA 168

Query: 164 LSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWF 223
           L +SP+LKD EVPWHLI +AIFFTL+KLPGPYYPYWGRIFIPH ANGGLFRTLW   LW+
Sbjct: 169 LDISPLLKDAEVPWHLICMAIFFTLLKLPGPYYPYWGRIFIPHFANGGLFRTLWFALLWY 228

Query: 224 RRPRKTS 231
           RRP+K S
Sbjct: 229 RRPQKAS 235

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BLAST of Lsi11G010320 vs. TrEMBL
Match: V4RPJ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029145mg PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 120/181 (66.30%), Postives = 148/181 (81.77%), Query Frame = 1 

Query: 50  QNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALDNFIQLI 109
           +NA+  + CAMNM AGQS D  +++ D L + V+KLWD+SP+PVK FPWN AL+NFIQLI
Sbjct: 50  RNAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLI 109

Query: 110 ADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTALSLSPI 169
            DL + V+KYL VPLL V+S+SEMSYCAHEKKL LVP P +IG ++A+ +R+T L LSP+
Sbjct: 110 LDLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAIADLLRETILDLSPL 169

Query: 170 LKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWFRRPRKT 229
           LKD EVPWHLI I IFFT++KLPGPYYPYWGRIFIPH ANG L+RTLW  FLW+R+P+K 
Sbjct: 170 LKDAEVPWHLIAIGIFFTVLKLPGPYYPYWGRIFIPHFANGALWRTLWFAFLWYRKPKKA 229

Query: 230 S 231
           S
Sbjct: 230 S 230

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BLAST of Lsi11G010320 vs. TrEMBL
Match: A0A067DAN9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0255731mg PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.5e-67
Identity = 119/180 (66.11%), Postives = 147/180 (81.67%), Query Frame = 1 

Query: 51  NARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALDNFIQLIA 110
           NA+  + CAMNM AGQS D  +++ D L + V+KLWD+SP+PVK FPWN AL+NFIQLI 
Sbjct: 23  NAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLIL 82

Query: 111 DLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTALSLSPIL 170
           DL + V+KYL VPLL V+S+SEMSYCAHEKKL LVP P +IG ++++ +R+T L LSP+L
Sbjct: 83  DLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLL 142

Query: 171 KDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWFRRPRKTS 230
           KD EVPWHLI I IFFT+IKLPGPYYPYWGR+FIPH ANG L+RTLW  FLW+R+P+K S
Sbjct: 143 KDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKAS 202

[Close]
BLAST of Lsi11G010320 vs. TAIR10
Match: AT1G49510.1 (AT1G49510.1 embryo defective 1273)

HSP 1 Score: 224.9 bits (572), Expect = 5.3e-59
Identity = 102/179 (56.98%), Postives = 139/179 (77.65%), Query Frame = 1 

Query: 53  RSVVSCAMNMTAGQSDDSGR-VSWDSLKDMVKKLWDSSPEPVKCFPWNEALDNFIQLIAD 112
           RS++  A++M +G S +  + +++D+L    K +WD+SP+PVK FPWN A  NFIQL+ D
Sbjct: 50  RSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLD 109

Query: 113 LILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTALSLSPILK 172
           L ++V+K+L VP+L V+S+SEMSYCAHE+KL LVPFP +IG  VA  +++TAL +SP LK
Sbjct: 110 LAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLK 169

Query: 173 DLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWFRRPRKTS 231
           + EVPWHLI + +FFTLIKLPGPYYPYWGR+ +PH ANG L R LWS+F W+++ R TS
Sbjct: 170 EAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTS 228

[Close]
BLAST of Lsi11G010320 vs. NCBI nr
Match: gi|659109835|ref|XP_008454906.1| (PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.6e-108
Identity = 192/212 (90.57%), Postives = 204/212 (96.23%), Query Frame = 1 

Query: 34  SPKCGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPV 93
           SP+C H+VSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRV+WDSLK+ VK+LWD+SPEPV
Sbjct: 32  SPECSHIVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVNWDSLKNKVKQLWDTSPEPV 91

Query: 94  KCFPWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGF 153
           K FPWNEALDNFIQLIADLILTVIKYL VPLL+VTS+SEMSYCAHEKKLL+VPFPFIIGF
Sbjct: 92  KSFPWNEALDNFIQLIADLILTVIKYLSVPLLLVTSLSEMSYCAHEKKLLIVPFPFIIGF 151

Query: 154 SVAEAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLF 213
           SVAE MRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPY+PYWGRIFIPHLANGGL 
Sbjct: 152 SVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYFPYWGRIFIPHLANGGLV 211

Query: 214 RTLWSLFLWFRRPRKTSMLLKHNKNHLDTKNN 246
           RTLWS FLWFRRP+KTSMLLKHN+NHLDTK N
Sbjct: 212 RTLWSFFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]
BLAST of Lsi11G010320 vs. NCBI nr
Match: gi|778725219|ref|XP_004137121.2| (PREDICTED: uncharacterized protein LOC101221519 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-104
Identity = 189/218 (86.70%), Postives = 201/218 (92.20%), Query Frame = 1 

Query: 28  IVDERWSPKCGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWD 87
           +   R SP+C HVVSLKPHKRFQNA SVVSCA NMTAGQSDDSGRV+WDSLK+ VK+LW+
Sbjct: 26  LAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSGRVNWDSLKNRVKQLWE 85

Query: 88  SSPEPVKCFPWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPF 147
           SSPEPVK FPWNEALDNFIQLIADLILTVIKYL VPLL+VTS+SEMSYCAHEKKLL+VPF
Sbjct: 86  SSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLSEMSYCAHEKKLLIVPF 145

Query: 148 PFIIGFSVAEAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHL 207
            FIIGFS AE MRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGP YPYWGRIFIPHL
Sbjct: 146 LFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPSYPYWGRIFIPHL 205

Query: 208 ANGGLFRTLWSLFLWFRRPRKTSMLLKHNKNHLDTKNN 246
           ANGGL RT WS+FLWFRRP+KTSMLLKHN+NHLDTK N
Sbjct: 206 ANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]
BLAST of Lsi11G010320 vs. NCBI nr
Match: gi|802598826|ref|XP_012072461.1| (PREDICTED: uncharacterized protein LOC105634239 [Jatropha curcas])

HSP 1 Score: 283.1 bits (723), Expect = 4.6e-73
Identity = 136/209 (65.07%), Postives = 164/209 (78.47%), Query Frame = 1 

Query: 37  CGHVVSLKPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCF 96
           C H +S+KP++ FQN +  VSCA+NM AGQS D  +  ++ L    +KLWDS P+PVK F
Sbjct: 44  CSHSLSVKPNQIFQNTKLNVSCAINMAAGQSGDPEKFQFEHLSSKARKLWDSCPQPVKSF 103

Query: 97  PWNEALDNFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVA 156
           PWN AL+NFIQLI DL++ VIKYLCVPLL V+S+SEMSYCAH+KKL  VPFP +IG +VA
Sbjct: 104 PWNRALENFIQLILDLVVAVIKYLCVPLLAVSSLSEMSYCAHQKKLFYVPFPLLIGIAVA 163

Query: 157 EAMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTL 216
            A++ TAL LSP LKD EVPWHLI IAIFFTLIKLPGP YPYWGRIF+PH+ANG L+RTL
Sbjct: 164 GALKDTALELSPRLKDAEVPWHLIAIAIFFTLIKLPGPCYPYWGRIFVPHIANGVLWRTL 223

Query: 217 WSLFLWFRRPRKTSMLLKHNKNHLDTKNN 246
           WS FLWFRRPRK S  +   +N  D+ N+
Sbjct: 224 WSAFLWFRRPRKGSGAVL-QQNSADSSNS 251

[Close]
BLAST of Lsi11G010320 vs. NCBI nr
Match: gi|1000959305|ref|XP_002521835.2| (PREDICTED: uncharacterized protein LOC8283263 isoform X2 [Ricinus communis])

HSP 1 Score: 270.0 bits (689), Expect = 4.0e-69
Identity = 125/187 (66.84%), Postives = 152/187 (81.28%), Query Frame = 1 

Query: 44  KPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALD 103
           K +K F+NAR  +SCAMN+ AGQS D  +++ D + D  + LWD+SP+PVK FPWN AL+
Sbjct: 52  KLNKSFRNARLNISCAMNVAAGQSGDPEKLNVDHIIDKARNLWDTSPQPVKRFPWNRALE 111

Query: 104 NFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTA 163
           NFIQLI DL++ V+KYLCVPLL V+S+SEMSYCAH KKL  VP P +IG  VA  +++TA
Sbjct: 112 NFIQLILDLVVAVVKYLCVPLLAVSSLSEMSYCAHHKKLSFVPLPLLIGIVVAGILKETA 171

Query: 164 LSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWF 223
           L LSP+LKD EVPWHLI IAIFF+LIKLPGPYYPYWGRIFIPH ANG L+RT+WS FLW+
Sbjct: 172 LELSPLLKDAEVPWHLIAIAIFFSLIKLPGPYYPYWGRIFIPHFANGVLWRTIWSAFLWY 231

Query: 224 RRPRKTS 231
           R+PRK S
Sbjct: 232 RKPRKAS 238

[Close]
BLAST of Lsi11G010320 vs. NCBI nr
Match: gi|1000959303|ref|XP_015576446.1| (PREDICTED: uncharacterized protein LOC8283263 isoform X1 [Ricinus communis])

HSP 1 Score: 270.0 bits (689), Expect = 4.0e-69
Identity = 125/187 (66.84%), Postives = 152/187 (81.28%), Query Frame = 1 

Query: 44  KPHKRFQNARSVVSCAMNMTAGQSDDSGRVSWDSLKDMVKKLWDSSPEPVKCFPWNEALD 103
           K +K F+NAR  +SCAMN+ AGQS D  +++ D + D  + LWD+SP+PVK FPWN AL+
Sbjct: 55  KLNKSFRNARLNISCAMNVAAGQSGDPEKLNVDHIIDKARNLWDTSPQPVKRFPWNRALE 114

Query: 104 NFIQLIADLILTVIKYLCVPLLVVTSVSEMSYCAHEKKLLLVPFPFIIGFSVAEAMRQTA 163
           NFIQLI DL++ V+KYLCVPLL V+S+SEMSYCAH KKL  VP P +IG  VA  +++TA
Sbjct: 115 NFIQLILDLVVAVVKYLCVPLLAVSSLSEMSYCAHHKKLSFVPLPLLIGIVVAGILKETA 174

Query: 164 LSLSPILKDLEVPWHLITIAIFFTLIKLPGPYYPYWGRIFIPHLANGGLFRTLWSLFLWF 223
           L LSP+LKD EVPWHLI IAIFF+LIKLPGPYYPYWGRIFIPH ANG L+RT+WS FLW+
Sbjct: 175 LELSPLLKDAEVPWHLIAIAIFFSLIKLPGPYYPYWGRIFIPHFANGVLWRTIWSAFLWY 234

Query: 224 RRPRKTS 231
           R+PRK S
Sbjct: 235 RKPRKAS 241

The following BLAST results are available for this feature:
BLAST of Lsi11G010320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi11G010320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6P0_CUCSA9.3e-10586.70Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074900 PE=4 SV=1[more]
A0A067L2F1_JATCU3.2e-7365.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04887 PE=4 SV=1[more]
W9R0W6_9ROSA8.2e-6967.38Uncharacterized protein OS=Morus notabilis GN=L484_026898 PE=4 SV=1[more]
V4RPJ5_9ROSI5.3e-6866.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029145mg PE=4 SV=1[more]
A0A067DAN9_CITSI1.5e-6766.11Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0255731mg PE=4 ... [more]
BLAST of Lsi11G010320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49510.15.3e-5956.98 embryo defective 1273[more]
BLAST of Lsi11G010320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109835|ref|XP_008454906.1|2.6e-10890.57PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo][more]
gi|778725219|ref|XP_004137121.2|1.3e-10486.70PREDICTED: uncharacterized protein LOC101221519 [Cucumis sativus][more]
gi|802598826|ref|XP_012072461.1|4.6e-7365.07PREDICTED: uncharacterized protein LOC105634239 [Jatropha curcas][more]
gi|1000959305|ref|XP_002521835.2|4.0e-6966.84PREDICTED: uncharacterized protein LOC8283263 isoform X2 [Ricinus communis][more]
gi|1000959303|ref|XP_015576446.1|4.0e-6966.84PREDICTED: uncharacterized protein LOC8283263 isoform X1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009658 chloroplast organization
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G010320.1Lsi11G010320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36000FAMILY NOT NAMEDcoord: 42..241
score: 3.2E
NoneNo IPR availablePANTHERPTHR36000:SF2SUBFAMILY NOT NAMEDcoord: 42..241
score: 3.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G010320Csa7G074900Cucumber (Chinese Long) v2culsiB495
Lsi11G010320CSPI07G07880Wild cucumber (PI 183967)cpilsiB507
Lsi11G010320Cucsa.220110Cucumber (Gy14) v1cgylsiB361
Lsi11G010320CmaCh11G017710Cucurbita maxima (Rimu)cmalsiB092
Lsi11G010320CmoCh11G013390Cucurbita moschata (Rifu)cmolsiB089
Lsi11G010320CmoCh19G006430Cucurbita moschata (Rifu)cmolsiB457
Lsi11G010320Cla015988Watermelon (97103) v1lsiwmB106
Lsi11G010320MELO3C018427Melon (DHL92) v3.5.1lsimeB097
Lsi11G010320ClCG02G005650Watermelon (Charleston Gray)lsiwcgB097
Lsi11G010320MELO3C018427.2Melon (DHL92) v3.6.1lsimedB103
Lsi11G010320Cla97C02G032630Watermelon (97103) v2lsiwmbB086
Lsi11G010320Bhi05G001018Wax gourdlsiwgoB115
Lsi11G010320Cp4.1LG04g08240Cucurbita pepo (Zucchini)cpelsiB533
Lsi11G010320Cp4.1LG15g05130Cucurbita pepo (Zucchini)cpelsiB199
Lsi11G010320CsGy7G007440Cucumber (Gy14) v2cgyblsiB463
Lsi11G010320CsaV3_7G008860Cucumber (Chinese Long) v3cuclsiB530
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G010320Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi11G010320Bottle gourd (USVL1VR-Ls)lsilsiB047
Lsi11G010320Cucumber (Gy14) v1cgylsiB146
Lsi11G010320Cucurbita maxima (Rimu)cmalsiB472
Lsi11G010320Cucurbita maxima (Rimu)cmalsiB562
Lsi11G010320Cucurbita maxima (Rimu)cmalsiB784
Lsi11G010320Cucurbita moschata (Rifu)cmolsiB545
Lsi11G010320Cucurbita pepo (Zucchini)cpelsiB605
Lsi11G010320Wild cucumber (PI 183967)cpilsiB097
Lsi11G010320Wild cucumber (PI 183967)cpilsiB435
Lsi11G010320Cucumber (Chinese Long) v2culsiB102
Lsi11G010320Melon (DHL92) v3.5.1lsimeB120
Lsi11G010320Watermelon (Charleston Gray)lsiwcgB075
Lsi11G010320Watermelon (Charleston Gray)lsiwcgB090
Lsi11G010320Watermelon (97103) v1lsiwmB088
Lsi11G010320Cucumber (Gy14) v2cgyblsiB090
Lsi11G010320Melon (DHL92) v3.6.1lsimedB127
Lsi11G010320Silver-seed gourdcarlsiB186
Lsi11G010320Silver-seed gourdcarlsiB809
Lsi11G010320Cucumber (Chinese Long) v3cuclsiB109
Lsi11G010320Cucumber (Chinese Long) v3cuclsiB458
Lsi11G010320Watermelon (97103) v2lsiwmbB108