CmoCh11G013390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G013390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Embryo defective 1273 protein, putative
Location	Cmo_Chr11 : 9278030 .. 9281558 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTCAGGTTTCTTTTGGGTTATGGTGTATCCGTGAACAAACCCTTCTTCCAAAACTGTGTTTCGTCCCTTAACAGCTTCAATTGACGCCCATCCATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGAGTAAGCTCGACCACCCTTCCTTCTATTTCTCTTTTTCAAGTATTTTTGTGAAGGCTGAGTTTATGTGTGGGATTTTGGGCGCTCGGTTTCTAGCTTTTTAGAATGCATTTGTTTTGTTTCTCAATGTGGATGAAATTTGTTGTGTAATTGGCAAATCATGTTGGTTAAATTGGTGGAACAACCTTCTTGTGAATTTCTGGGTGATGTTGATTAATTGGAAAATGCTATTTGGTGGTAAATTCTGTTGCTGTGATGGCTGAATGCCTCTACATTAATGGGTATGGGTATAAACTTATCTGTTTTAGCCTCTCATAGCATTGAAAGAAGCGAGGAGCTATTTAAGAGGGAAGAGTAGGCAAGACTGTAGTTATCTTCGAGGTAACATAAGCGGAAACAAGATCGATTGCACTCTCACACACACGAACATAAATGAACAAAGAGACACAACGATTTAAGTGGTTCAGAGAGAAAAAATTCTCCTATATCCACGGGTGGTAGGCAATTACTATAATCAAAGTGTTTACAAATGTACCTCTCACACTCTCACACTCTACACTACGACGTCTCACTTACAAAGTTCCTCCCAATTGCCTCTAGGCAAATACAAAATGGCAATGACTTCACATCCTAGAACAATGCTAGAAAAACCTTTATATAGGCATAGCAATACTAATTCTCATGCATGAATCGAAGCAACACTAATGGTCATACATGAATCAAGATGATTCATGTACCAATATCGAATATGAACCAAATGAATCCAATAGATTCATGAATAGAAGTGAGCAATGTACCAAAAATATTCATGAATCCATGTATTCATGAACCAAATCTTTATGACAATTCTCAACATAGCTTGTTGGCTTAAAATTTTGGGTGTTTTATTGAATGTAATCATAAAGTAGGGGCTATGAGTTCAAACTACTACCATGGTAGTTCCTCTTTATTCCATACTAATAGTCTATGTATGTAAACATAGTTTAGCTTGTTAATATATGTTCAATCAAAATGTCAGAGGTTTGAATCCTCTCACCCACCCAGGATGAACTTTAAACAAAAAAGGACTATGCATTGAACTTCATGACTTGAATAATATCCAAGTTGAGGCTTGAATGCGTGAGTTAGATGATTGAGAATATATGAAATCATTAAATTTACTGGATGCGGTGGTGCTTTAGTCAATGAAGAATGGAAATGATATTCGGCCTTTAAATTTTAGCTTATGCAGTGTTTAACATTGGTGTGAGGGATTTTCATTTTTGTTTTAATGGATTTTCCACAACTCTAGTTCATTGTTGAACGAACTTGATGCCAATTGCTTACACTGTTTCCTTTTCTTTTTTATAATTCCTATTCTTTCAACTTAATCGTTCTATCCAAATTTATAATGTACGATTTTTGTTCTTATTGTAGCTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCTCATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGTTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCAGTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGTAAGGTTTCAGCATCATCGCTCCATTACGTGTGACACGTTAGTTGAATGAATCATAATGATAGTTCATTGACAAAGCATTGGTCTCATATCTTCCATTTTAGCTCTGCTGTTATATCGCCCTTGCGTTGACAACATTTTGTACTGTTTCTGGATTTACATAACTATATTTGCACATGATGCAATCGAAAACAATAAATATGTTGCTTTAATCAGCACTTTGTTGTTTCTTTTTACGTTTTCGCTCGTCACTTTTCTTATTGTTCTTTTAACACTCGTTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTTGAACGATAATTTTCGAAATAATGTTAACTGGGAATGTTCGAACACAGTTCAGTAGTCTTCCCGTTGCTCATTTTTATTTTGAAACGCACTCCTGAGCTTATCCTTCAGTAGAAATACAATATAAAGAGCTGTTTAAAGAACTCCTTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTTGAACGATCGTTTTCGAAATTTGGTTAGCTGGGAATGTTTGAACACAGTTTAGTAGTCTTCCTGTTGCTCATTTTTATTTGAAACACACTCCTGAGCTTGTCCTAGAGTAGAAATACAATATGAAGAGCTGTTTAAAGAACTCCTTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTTGAACGATCATTTTCGAAATTCGGTTCCCTGGGAATGTTTGAACACAGATTAGTAGTCTTCCTGTTGCTCATTTTTATATTGAAACACACTCTGGATCTTGTTCTTCAGTAGAAATACAATATAAAGAACTGTATAAAGATCTCGATTGATTTCTAGTTTCCTGTGAATTCTACTGAACATTTCTTGTCGATTCATTTATAGTTGTCTTCCTTTTTCCTTTCTATGATTCAGGATCTAGAAGTACCATGGCATTTGATCACAATTGCTCTGTTCTTCACACTCGTTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGTGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATATTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGGCTCCAAGAACATTGGAGGAGCAGCATAGAAAGTTTCAGATGAATTATCCAGAACGAAGTGAGTGAACGAGGCGAGGGAGCGAACTGATGAATAAATTGTTGTAGTACGAGACCGAATATAGTTGATTGAAGGATTGTTTTGGTGATGGGACATTGGAGATAAGCCTTAAAATGAAGGCTAAATGTGTTTTCATGTAGTAGCACAGAAAGTTTTGGAGGCTGTATTTACATATCATAATTGTTGGAGTAACTCAAATCCTAGAACATGAACATAGTACACAATGTTCTTCAATTCCTTCCTAAATTTTAAGAAGATTTGTAAGATGGGGCAAAGCTATACTTACATCAACATAAATCAATAAAGTTGTATCTCATGTTCTAAGAACGTCG

mRNA sequence

AAATTTTCAGGTTTCTTTTGGGTTATGGTGTATCCGTGAACAAACCCTTCTTCCAAAACTGTGTTTCGTCCCTTAACAGCTTCAATTGACGCCCATCCATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGACTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCTCATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGTTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCAGTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGATCTAGAAGTACCATGGCATTTGATCACAATTGCTCTGTTCTTCACACTCGTTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGTGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATATTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGGCTCCAAGAACATTGGAGGAGCAGCATAGAAAGTTTCAGATGAATTATCCAGAACGAAGTGAGTGAACGAGGCGAGGGAGCGAACTGATGAATAAATTGTTGTAGTACGAGACCGAATATAGTTGATTGAAGGATTGTTTTGGTGATGGGACATTGGAGATAAGCCTTAAAATGAAGGCTAAATGTGTTTTCATGTAGTAGCACAGAAAGTTTTGGAGGCTGTATTTACATATCATAATTGTTGGAGTAACTCAAATCCTAGAACATGAACATAGTACACAATGTTCTTCAATTCCTTCCTAAATTTTAAGAAGATTTGTAAGATGGGGCAAAGCTATACTTACATCAACATAAATCAATAAAGTTGTATCTCATGTTCTAAGAACGTCG

Coding sequence (CDS)

ATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGACTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCTCATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGTTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCAGTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGATCTAGAAGTACCATGGCATTTGATCACAATTGCTCTGTTCTTCACACTCGTTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGTGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATATTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAA

Homology

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BLAST of CmoCh11G013390 vs. TrEMBL
Match: A0A0A0K6P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074900 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 6.6e-108
Identity = 194/234 (82.91%), Postives = 211/234 (90.17%), Query Frame = 1


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCA NM+AGQSDD G
Sbjct: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSG 69

Query: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122
           R +WDSLK+RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL +PLL VTSLS
Sbjct: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLVKL 182
           EMSYCAHEKKLLIVPF  IIGFS AEVMRQTALSLSPILKDLEVPWHLITIA+FFTL+KL
Sbjct: 130 EMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 237
           PGP YPYWGRIF+PH ANGGL+RT WSMFLWFRRP+KTS+LLK  ENHLDT KN
Sbjct: 190 PGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]

BLAST of CmoCh11G013390 vs. TrEMBL
Match: A0A067L2F1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04887 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 139/231 (60.17%), Postives = 173/231 (74.89%), Query Frame = 1


Query: 4   HLQISAKMALHAPVLLAPRLRSPE-----CSHVVSLKPHKRIQNARSMVSCAMNMSAGQS 63
           H+Q S KMAL        R+  P      CSH +S+KP++  QN +  VSCA+NM+AGQS
Sbjct: 15  HVQTSTKMALRVRSPSIQRITGPSQYFEACSHSLSVKPNQIFQNTKLNVSCAINMAAGQS 74

Query: 64  DDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAV 123
            DP +  ++ L  + +KLWD+ P+PVK FPWN AL NFIQLI DL+++VIKYL +PLLAV
Sbjct: 75  GDPEKFQFEHLSSKARKLWDSCPQPVKSFPWNRALENFIQLILDLVVAVIKYLCVPLLAV 134

Query: 124 TSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFT 183
           +SLSEMSYCAH+KKL  VPFP++IG +VA  ++ TAL LSP LKD EVPWHLI IA+FFT
Sbjct: 135 SSLSEMSYCAHQKKLFYVPFPLLIGIAVAGALKDTALELSPRLKDAEVPWHLIAIAIFFT 194

Query: 184 LVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKEN 230
           L+KLPGP YPYWGRIF+PH ANG L RT+WS FLWFRRPRK S  + Q+ +
Sbjct: 195 LIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRKGSGAVLQQNS 245

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BLAST of CmoCh11G013390 vs. TrEMBL
Match: V4RPJ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029145mg PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.8e-71
Identity = 131/224 (58.48%), Postives = 170/224 (75.89%), Query Frame = 1


Query: 2   ATHLQISAKMALHA----PVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQ 61
           +THL   + + LH     P   A +LR       +    +  ++NA+  + CAMNM+AGQ
Sbjct: 14  STHLHTPSILPLHGIKVLPYFRASKLR-------LGANRNGPLRNAKGNICCAMNMAAGQ 73

Query: 62  SDDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLA 121
           S DP + + D L +RV+KLWDNSP+PVK FPWN AL NFIQLI DL ++V+KYLS+PLLA
Sbjct: 74  SGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLA 133

Query: 122 VTSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFF 181
           V+SLSEMSYCAHEKKL +VP P++IG ++A+++R+T L LSP+LKD EVPWHLI I +FF
Sbjct: 134 VSSLSEMSYCAHEKKLFLVPVPLLIGMAIADLLRETILDLSPLLKDAEVPWHLIAIGIFF 193

Query: 182 TLVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           T++KLPGPYYPYWGRIF+PHFANG L RT+W  FLW+R+P+K S
Sbjct: 194 TVLKLPGPYYPYWGRIFIPHFANGALWRTLWFAFLWYRKPKKAS 230

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BLAST of CmoCh11G013390 vs. TrEMBL
Match: W9R0W6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026898 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70
Identity = 133/222 (59.91%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 8   SAKMALHA-PVL-------LAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSD 67
           S KMAL+  P L       L+ R++   CS     K +  +QN    + CA+NM+AG+S+
Sbjct: 16  SMKMALNTRPPLFQGFKEGLSQRIKESGCSF--GFKSYGLVQNPVPNIFCAINMAAGRSN 75

Query: 68  DPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVT 127
           DP + + D L D+ +KLW++SP+PVK FPWN  L+NFIQL  DLIL+V+KYLS+PLL VT
Sbjct: 76  DPEKTNLDHLMDKARKLWESSPQPVKSFPWNRTLDNFIQLTLDLILAVVKYLSVPLLVVT 135

Query: 128 SLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTL 187
           SLSEMSYCAHE+KL +VPFP+ +G +VA V+RQTAL +SP+LKD EVPWHLI +A+FFTL
Sbjct: 136 SLSEMSYCAHERKLKLVPFPIFLGIAVAGVLRQTALDISPLLKDAEVPWHLICMAIFFTL 195

Query: 188 VKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           +KLPGPYYPYWGRIF+PHFANGGL RT+W   LW+RRP+K S
Sbjct: 196 LKLPGPYYPYWGRIFIPHFANGGLFRTLWFALLWYRRPQKAS 235

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BLAST of CmoCh11G013390 vs. TrEMBL
Match: A0A067DAN9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0255731mg PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70
Identity = 120/180 (66.67%), Postives = 153/180 (85.00%), Query Frame = 1


Query: 42  NARSMVSCAMNMSAGQSDDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIA 101
           NA+  + CAMNM+AGQS DP + + D L +RV+KLWDNSP+PVK FPWN AL NFIQLI 
Sbjct: 23  NAKGNICCAMNMAAGQSGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLIL 82

Query: 102 DLILSVIKYLSIPLLAVTSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPIL 161
           DL ++V+KYLS+PLLAV+SLSEMSYCAHEKKL +VP P++IG ++++++R+T L LSP+L
Sbjct: 83  DLFMAVVKYLSVPLLAVSSLSEMSYCAHEKKLFLVPVPLLIGMAISDLLRETILDLSPLL 142

Query: 162 KDLEVPWHLITIALFFTLVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 221
           KD EVPWHLI I +FFT++KLPGPYYPYWGR+F+PHFANG L RT+W  FLW+R+P+K S
Sbjct: 143 KDAEVPWHLIAIGIFFTVIKLPGPYYPYWGRLFIPHFANGALWRTLWFAFLWYRKPKKAS 202

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BLAST of CmoCh11G013390 vs. TAIR10
Match: AT1G49510.1 (AT1G49510.1 embryo defective 1273)

HSP 1 Score: 238.4 bits (607), Expect = 4.4e-63
Identity = 107/179 (59.78%), Postives = 145/179 (81.01%), Query Frame = 1


Query: 44  RSMVSCAMNMSAGQS-DDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIAD 103
           RS++  A++M +G S + P + ++D+L  R K +WDNSP+PVK FPWN A  NFIQL+ D
Sbjct: 50  RSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLD 109

Query: 104 LILSVIKYLSIPLLAVTSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILK 163
           L +SV+K+L +P+LAV+S+SEMSYCAHE+KL +VPFP++IG  VA V+++TAL +SP LK
Sbjct: 110 LAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLK 169

Query: 164 DLEVPWHLITIALFFTLVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           + EVPWHLI + +FFTL+KLPGPYYPYWGR+ +PHFANG LLR +WSMF W+++ R TS
Sbjct: 170 EAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTS 228

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BLAST of CmoCh11G013390 vs. NCBI nr
Match: gi|659109835|ref|XP_008454906.1| (PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo])

HSP 1 Score: 412.5 bits (1059), Expect = 4.9e-112
Identity = 198/234 (84.62%), Postives = 216/234 (92.31%), Query Frame = 1


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S KMALHAP LLAP  RSPECSH+VSLKPHKR QNARS+VSCAMNM+AGQSDD G
Sbjct: 10  THFQTSIKMALHAPFLLAPSCRSPECSHIVSLKPHKRFQNARSVVSCAMNMTAGQSDDSG 69

Query: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122
           R +WDSLK++VK+LWD SPEPVK FPWNEAL+NFIQLIADLIL+VIKYLS+PLL VTSLS
Sbjct: 70  RVNWDSLKNKVKQLWDTSPEPVKSFPWNEALDNFIQLIADLILTVIKYLSVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLVKL 182
           EMSYCAHEKKLLIVPFP IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTL+KL
Sbjct: 130 EMSYCAHEKKLLIVPFPFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 237
           PGPY+PYWGRIF+PH ANGGL+RT+WS FLWFRRP+KTS+LLK  ENHLDT KN
Sbjct: 190 PGPYFPYWGRIFIPHLANGGLVRTLWSFFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]

BLAST of CmoCh11G013390 vs. NCBI nr
Match: gi|778725219|ref|XP_004137121.2| (PREDICTED: uncharacterized protein LOC101221519 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 9.5e-108
Identity = 194/234 (82.91%), Postives = 211/234 (90.17%), Query Frame = 1


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCA NM+AGQSDD G
Sbjct: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSG 69

Query: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122
           R +WDSLK+RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL +PLL VTSLS
Sbjct: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLVKL 182
           EMSYCAHEKKLLIVPF  IIGFS AEVMRQTALSLSPILKDLEVPWHLITIA+FFTL+KL
Sbjct: 130 EMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 237
           PGP YPYWGRIF+PH ANGGL+RT WSMFLWFRRP+KTS+LLK  ENHLDT KN
Sbjct: 190 PGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]

BLAST of CmoCh11G013390 vs. NCBI nr
Match: gi|802598826|ref|XP_012072461.1| (PREDICTED: uncharacterized protein LOC105634239 [Jatropha curcas])

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73
Identity = 139/231 (60.17%), Postives = 173/231 (74.89%), Query Frame = 1


Query: 4   HLQISAKMALHAPVLLAPRLRSPE-----CSHVVSLKPHKRIQNARSMVSCAMNMSAGQS 63
           H+Q S KMAL        R+  P      CSH +S+KP++  QN +  VSCA+NM+AGQS
Sbjct: 15  HVQTSTKMALRVRSPSIQRITGPSQYFEACSHSLSVKPNQIFQNTKLNVSCAINMAAGQS 74

Query: 64  DDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAV 123
            DP +  ++ L  + +KLWD+ P+PVK FPWN AL NFIQLI DL+++VIKYL +PLLAV
Sbjct: 75  GDPEKFQFEHLSSKARKLWDSCPQPVKSFPWNRALENFIQLILDLVVAVIKYLCVPLLAV 134

Query: 124 TSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFT 183
           +SLSEMSYCAH+KKL  VPFP++IG +VA  ++ TAL LSP LKD EVPWHLI IA+FFT
Sbjct: 135 SSLSEMSYCAHQKKLFYVPFPLLIGIAVAGALKDTALELSPRLKDAEVPWHLIAIAIFFT 194

Query: 184 LVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKEN 230
           L+KLPGP YPYWGRIF+PH ANG L RT+WS FLWFRRPRK S  + Q+ +
Sbjct: 195 LIKLPGPCYPYWGRIFVPHIANGVLWRTLWSAFLWFRRPRKGSGAVLQQNS 245

[Close]

BLAST of CmoCh11G013390 vs. NCBI nr
Match: gi|567860858|ref|XP_006423083.1| (hypothetical protein CICLE_v10029145mg [Citrus clementina])

HSP 1 Score: 276.2 bits (705), Expect = 5.4e-71
Identity = 131/224 (58.48%), Postives = 170/224 (75.89%), Query Frame = 1


Query: 2   ATHLQISAKMALHA----PVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQ 61
           +THL   + + LH     P   A +LR       +    +  ++NA+  + CAMNM+AGQ
Sbjct: 14  STHLHTPSILPLHGIKVLPYFRASKLR-------LGANRNGPLRNAKGNICCAMNMAAGQ 73

Query: 62  SDDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLA 121
           S DP + + D L +RV+KLWDNSP+PVK FPWN AL NFIQLI DL ++V+KYLS+PLLA
Sbjct: 74  SGDPEKLNLDQLVNRVRKLWDNSPQPVKSFPWNRALENFIQLILDLFMAVVKYLSVPLLA 133

Query: 122 VTSLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFF 181
           V+SLSEMSYCAHEKKL +VP P++IG ++A+++R+T L LSP+LKD EVPWHLI I +FF
Sbjct: 134 VSSLSEMSYCAHEKKLFLVPVPLLIGMAIADLLRETILDLSPLLKDAEVPWHLIAIGIFF 193

Query: 182 TLVKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           T++KLPGPYYPYWGRIF+PHFANG L RT+W  FLW+R+P+K S
Sbjct: 194 TVLKLPGPYYPYWGRIFIPHFANGALWRTLWFAFLWYRKPKKAS 230

[Close]

BLAST of CmoCh11G013390 vs. NCBI nr
Match: gi|703097625|ref|XP_010096165.1| (hypothetical protein L484_026898 [Morus notabilis])

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 133/222 (59.91%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 8   SAKMALHA-PVL-------LAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSD 67
           S KMAL+  P L       L+ R++   CS     K +  +QN    + CA+NM+AG+S+
Sbjct: 16  SMKMALNTRPPLFQGFKEGLSQRIKESGCSF--GFKSYGLVQNPVPNIFCAINMAAGRSN 75

Query: 68  DPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVT 127
           DP + + D L D+ +KLW++SP+PVK FPWN  L+NFIQL  DLIL+V+KYLS+PLL VT
Sbjct: 76  DPEKTNLDHLMDKARKLWESSPQPVKSFPWNRTLDNFIQLTLDLILAVVKYLSVPLLVVT 135

Query: 128 SLSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTL 187
           SLSEMSYCAHE+KL +VPFP+ +G +VA V+RQTAL +SP+LKD EVPWHLI +A+FFTL
Sbjct: 136 SLSEMSYCAHERKLKLVPFPIFLGIAVAGVLRQTALDISPLLKDAEVPWHLICMAIFFTL 195

Query: 188 VKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           +KLPGPYYPYWGRIF+PHFANGGL RT+W   LW+RRP+K S
Sbjct: 196 LKLPGPYYPYWGRIFIPHFANGGLFRTLWFALLWYRRPQKAS 235

The following BLAST results are available for this feature:

BLAST of CmoCh11G013390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G013390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6P0_CUCSA	6.6e-108	82.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074900 PE=4 SV=1	[more]
A0A067L2F1_JATCU	1.1e-73	60.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04887 PE=4 SV=1	[more]
V4RPJ5_9ROSI	3.8e-71	58.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029145mg PE=4 SV=1	[more]
W9R0W6_9ROSA	1.9e-70	59.91	Uncharacterized protein OS=Morus notabilis GN=L484_026898 PE=4 SV=1	[more]
A0A067DAN9_CITSI	2.5e-70	66.67	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0255731mg PE=4 ...	[more]

BLAST of CmoCh11G013390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49510.1	4.4e-63	59.78	embryo defective 1273	[more]

BLAST of CmoCh11G013390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109835\|ref\|XP_008454906.1\|	4.9e-112	84.62	PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo]	[more]
gi\|778725219\|ref\|XP_004137121.2\|	9.5e-108	82.91	PREDICTED: uncharacterized protein LOC101221519 [Cucumis sativus]	[more]
gi\|802598826\|ref\|XP_012072461.1\|	1.5e-73	60.17	PREDICTED: uncharacterized protein LOC105634239 [Jatropha curcas]	[more]
gi\|567860858\|ref\|XP_006423083.1\|	5.4e-71	58.48	hypothetical protein CICLE_v10029145mg [Citrus clementina]	[more]
gi\|703097625\|ref\|XP_010096165.1\|	2.7e-70	59.91	hypothetical protein L484_026898 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G013390.1	CmoCh11G013390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36000	FAMILY NOT NAMED	coord: 33..232 score: 3.2E
None	No IPR available	PANTHER	PTHR36000:SF2	SUBFAMILY NOT NAMED	coord: 33..232 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G013390	Cucsa.220110	Cucumber (Gy14) v1	cgycmoB0624
CmoCh11G013390	CmaCh11G017710	Cucurbita maxima (Rimu)	cmacmoB117
CmoCh11G013390	Cla015988	Watermelon (97103) v1	cmowmB109
CmoCh11G013390	Csa7G074900	Cucumber (Chinese Long) v2	cmocuB137
CmoCh11G013390	MELO3C018427	Melon (DHL92) v3.5.1	cmomeB085
CmoCh11G013390	ClCG02G005650	Watermelon (Charleston Gray)	cmowcgB088
CmoCh11G013390	CSPI07G07880	Wild cucumber (PI 183967)	cmocpiB136
CmoCh11G013390	Lsi11G010320	Bottle gourd (USVL1VR-Ls)	cmolsiB089
CmoCh11G013390	Cp4.1LG15g05130	Cucurbita pepo (Zucchini)	cmocpeB095
CmoCh11G013390	Cp4.1LG04g08240	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G013390	MELO3C018427.2	Melon (DHL92) v3.6.1	cmomedB091
CmoCh11G013390	CsaV3_7G008860	Cucumber (Chinese Long) v3	cmocucB0160
CmoCh11G013390	Cla97C02G032630	Watermelon (97103) v2	cmowmbB088
CmoCh11G013390	Bhi05G001018	Wax gourd	cmowgoB0119
CmoCh11G013390	CsGy7G007440	Cucumber (Gy14) v2	cgybcmoB881

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G013390	CmoCh19G006430	Cucurbita moschata (Rifu)	cmocmoB110

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G013390	Cucurbita maxima (Rimu)	cmacmoB494
CmoCh11G013390	Cucurbita maxima (Rimu)	cmacmoB842
CmoCh11G013390	Bottle gourd (USVL1VR-Ls)	cmolsiB093
CmoCh11G013390	Wild cucumber (PI 183967)	cmocpiB111
CmoCh11G013390	Cucumber (Chinese Long) v2	cmocuB108
CmoCh11G013390	Melon (DHL92) v3.5.1	cmomeB077
CmoCh11G013390	Melon (DHL92) v3.5.1	cmomeB133
CmoCh11G013390	Watermelon (Charleston Gray)	cmowcgB076
CmoCh11G013390	Watermelon (Charleston Gray)	cmowcgB086
CmoCh11G013390	Watermelon (97103) v1	cmowmB076
CmoCh11G013390	Watermelon (97103) v1	cmowmB106
CmoCh11G013390	Bottle gourd (USVL1VR-Ls)	cmolsiB079
CmoCh11G013390	Bottle gourd (USVL1VR-Ls)	cmolsiB140
CmoCh11G013390	Cucumber (Gy14) v2	cgybcmoB156
CmoCh11G013390	Melon (DHL92) v3.6.1	cmomedB123
CmoCh11G013390	Melon (DHL92) v3.6.1	cmomedB146
CmoCh11G013390	Silver-seed gourd	carcmoB0292
CmoCh11G013390	Cucumber (Chinese Long) v3	cmocucB0123
CmoCh11G013390	Cucumber (Chinese Long) v3	cmocucB0146
CmoCh11G013390	Watermelon (97103) v2	cmowmbB078
CmoCh11G013390	Watermelon (97103) v2	cmowmbB128
CmoCh11G013390	Watermelon (97103) v2	cmowmbB142
CmoCh11G013390	Cucurbita moschata (Rifu)	cmocmoB131
CmoCh11G013390	Cucurbita moschata (Rifu)	cmocmoB105