Lsi11G005380 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G005380
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCyclin-dependent kinase
Locationchr11 : 5637679 .. 5640282 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTAAGATTTAGCTTCTTTTTCCATTTGAGTTTGAGATATTTTCTGATGGAATGAATCAATAGTTCATAAGCTATTATTTTAGAGTTAAAGAGGAAATTTCTCATCTGATATTGTTGTTAGAATCATTTAAATTTGTAATAACATAAACTGATCTGTTGGTCTGCTCGTATCGGATTCTGAAACCCAATTAAACCTCTTTCCCTTCTATTTTCTAAGAAACCTTCCCCCTTTTCTTCCCTTTCAAGTTATTGTCAATGTGAATCAATTGGTGGGGCGTCTCATTTGTTTACCTGCAAAACGTCTTGCTTCTGTACCAGGCTAAAGAACCATGTTTATCCTTTGTCGCCGTTTTTCTTATCTCTATGATTCAAATTTCTGAATAAAGTTTTAAGGAATATATGCAGCTTTAGAACCTGGCTTTTGAATCTGTTGGAAAATAGTCTATATACCTTGCAATAATGTAGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGTTTCTTTACCATTCACTATGGATTATGTATGAATTAAAGTAAATAAGATTTGTGTATATGCAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGGTAAGTTCTAATGTCGCTTAGTTACCGTGGCCCTGTTGTAATTCACTTAACATGAAAAGATTTCGAGCTTGGTTAATATTCTGCAGTTTAGTTTTTTCAGTTCACACCACACTAACTTTATTTCAGTTGCCTTCCCGTTCATCCATTGAACTGAGATCATGAGGAGGAATCCATAAGTTCAAGTTTATATAGCTGACATTTTTTTCAGTGAAAAATGAGCTAAATATATGATTCAATCCCTCATGTTTGGTTCATTTTTCAAATTTGTCCATAATCTAGAGGTTTCTGATTTTCTGTTCCTTTAACAAGTCTTCGTTTTATCACAAAAATGTTAAAATTTATAGATGAAGAACTGATGTCGAAATACACTCACGCTCACACTCACACGGCTTAGGTATACATTGTTCTTCTTTTAAAGTTAAATAGTGCTAAGTACTTGATTGAAACAATTCCATGTATAAAAGACAAAATTGAAAATTTTAAATGATTCTATACAAAATGTAATAGTGACTCAAACACTGCTTAGAAAGATATCAACAACCAGAGACCTTTTGTTCGATGCTGCTATATCGATATCGTGCATCTGATCTGTCATATTTCGAGATCCCTGAAAATTTTCTTCCAATTTCTTGGATGTTATAAAAATACTTTTTATGTATACACAACTTAATGTGTTAAGATGCTATGCAATGCAGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA

mRNA sequence

AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA

Coding sequence (CDS)

ATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGA

Protein sequence

MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.5e-47
Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           L +S+S K     P+VL +L++  + S+QKNE LL   K KDS TIFHG RAP +SI  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
            +RI KY+ C  SC V+A IY+ERYLQ+   Y+T+L++HRLLITS++VAAKF D   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL------------ 198
            FYA+VGG+ST EMN LE++ LFNLDFRL V  + F ++CLQL+KE +            
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVLVIDRPIQQVH 202

Query: 199 GVENQADRRAGNKARTKCLPQITGYTCSAI 217
           GV +  D    +     C  ++  Y+  A+
Sbjct: 203 GVNSTKDLSRNSSIDESCKSELMRYSSQAL 232

BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.7e-40
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LGL   GK +   P VLS LSS  E S+  N      L   DSVT+F G   P +SI  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           +DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 185
            +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 1

Query: 30  SSPRVLSILSSVFETSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSIGQYIDRILKYTCC 89
           ++PRVL+I+S V E  + +NE L K+ K    S+  FHG RAP++SI +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTSCLVVAYIYIERYLQKMDAYLT-NLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGV 149
             +C VV Y+YI+R   K    L  +LN+HRLL+T +M+AAK +D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           S  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.7e-35
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 1

Query: 33  RVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSC 92
           ++++ LSS+ E   + N+   +   +   V++FHG   PT++I  Y++RI KY  C  SC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 1

Query: 32  PRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTS 91
           P V++ +SS+ +   + N+ L +  ++   ++ F+    P++SI  Y++RI KY  C  S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   ++ +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

BLAST of Lsi11G005380 vs. TrEMBL
Match: A0A0A0LJL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021730 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.5e-108
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 1

Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+NGMDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE  IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFH SRAPTM IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

BLAST of Lsi11G005380 vs. TrEMBL
Match: A6YTD1_CUCME (Cyclin-dependent kinase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.8e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 1

Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

BLAST of Lsi11G005380 vs. TrEMBL
Match: B9RF55_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1431440 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.1e-56
Identity = 110/174 (63.22%), Postives = 141/174 (81.03%), Query Frame = 1

Query: 14  ETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTM 73
           ET S LGL ESG  I  +PRVL +L+SV E S QKN++LL+  ++KD VT+FHGSR+P++
Sbjct: 8   ETYSALGLYESGGRISGTPRVLLLLASVLERSTQKNDRLLEGSRRKDVVTVFHGSRSPSL 67

Query: 74  SIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDA 133
           SI QYI+R+ KYT C TSC VVAYIY+ER+L++MDA LT+LN+HRLLITSIM+AAKF+D 
Sbjct: 68  SIRQYIERVFKYTKCSTSCFVVAYIYVERFLRRMDACLTSLNVHRLLITSIMLAAKFLDD 127

Query: 134 GCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLG 188
            CYNN +YAKVGGVST EMN +E + LFNLDFRL VT + F ++CL+L++E  G
Sbjct: 128 ECYNNAYYAKVGGVSTPEMNRMETKLLFNLDFRLQVTVEAFRSYCLKLERECGG 181

BLAST of Lsi11G005380 vs. TrEMBL
Match: U5FQW8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02390g PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.5e-55
Identity = 109/177 (61.58%), Postives = 141/177 (79.66%), Query Frame = 1

Query: 9   MDFQVETDSLLGL-SESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHG 68
           M  + ET   LGL  ES + +  +PRVL +++SV E S+Q NEKLL   ++KD++TIFHG
Sbjct: 1   MAAESETFMALGLLDESSRGVSGTPRVLVLIASVLEKSLQNNEKLLTTSRRKDAITIFHG 60

Query: 69  SRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVA 128
           SR+PT+SI QYI+R+ KY+ C TSC VVAYIYI ++LQ+ DAYLT+LN HRLLITSIMVA
Sbjct: 61  SRSPTLSIRQYIERVFKYSRCSTSCFVVAYIYINKFLQQTDAYLTSLNAHRLLITSIMVA 120

Query: 129 AKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 185
           AKF+D  CY+N +YA++GGVST EMN +E++FLFNLDFRLHVTA+VF   CL+L+ E
Sbjct: 121 AKFLDDDCYDNAYYARIGGVSTAEMNRMEMKFLFNLDFRLHVTAEVFMNCCLKLENE 177

BLAST of Lsi11G005380 vs. TrEMBL
Match: F6HQ58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00540 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54
Identity = 107/169 (63.31%), Postives = 136/169 (80.47%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LGL E GK +  +PRVL +LSS+ E S+QKNE LL+  + KD++TIFHGSRAPT+S+ QY
Sbjct: 28  LGLKELGKGVIGTPRVLLLLSSLLERSVQKNETLLETAQIKDAITIFHGSRAPTLSVRQY 87

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           IDRI KY+ C  SC VVA+IY++R+LQ  DA+LT+LN+HRLLITS+MVAAKFID   +NN
Sbjct: 88  IDRIFKYSGCSPSCFVVAHIYVDRFLQHTDAHLTSLNVHRLLITSVMVAAKFIDDAFFNN 147

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLG 188
            +YAKVGGVST E+N LE++FLF+LDFRL VT + F ++C QL KEV G
Sbjct: 148 AYYAKVGGVSTAELNRLEMKFLFSLDFRLQVTVETFRSYCSQLDKEVAG 196

BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G05327.1 (AT3G05327.1 Cyclin family protein)

HSP 1 Score: 178.3 bits (451), Expect = 5.0e-45
Identity = 94/194 (48.45%), Postives = 129/194 (66.49%), Query Frame = 1

Query: 19  LGLSESGKLIPSS--PRVLSILSSVFETSIQKNEKLLK-RLKKKDSVTIFHGSRAPTMSI 78
           LGL E     P S  PRV+++L+S  E  IQKN+K    R  K D +T+FHGS+AP++SI
Sbjct: 16  LGLLEDSDQPPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSI 75

Query: 79  GQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAY-----LTNLNIHRLLITSIMVAAKF 138
            +Y +RI +Y  C   C V A+ YI RYLQ+ +A      LT+LN+HRLLITS++VAAKF
Sbjct: 76  YRYTERIHRYAQCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKF 135

Query: 139 IDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGVEN 198
           ++  CYNN +YAK+GGVST+EMN LE  FL ++DFRL++T + F  HCL LQKE +  ++
Sbjct: 136 LERQCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKETVPCDS 195

Query: 199 QADRRAGNKARTKC 205
           +  R    +    C
Sbjct: 196 RKLRTVLGEIACSC 209

BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G63120.1 (AT3G63120.1 cyclin p1;1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LGL   GK +   P VLS LSS  E S+  N      L   DSVT+F G   P +SI  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           +DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 185
            +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-37
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 1

Query: 30  SSPRVLSILSSVFETSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSIGQYIDRILKYTCC 89
           ++PRVL+I+S V E  + +NE L K+ K    S+  FHG RAP++SI +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTSCLVVAYIYIERYLQKMDAYLT-NLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGV 149
             +C VV Y+YI+R   K    L  +LN+HRLL+T +M+AAK +D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           S  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

BLAST of Lsi11G005380 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 1

Query: 33  RVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSC 92
           ++++ LSS+ E   + N+   +   +   V++FHG   PT++I  Y++RI KY  C  SC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

BLAST of Lsi11G005380 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-36
Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 1

Query: 32  PRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTS 91
           P V++ +SS+ +   + N+ L +  ++   ++ F+    P++SI  Y++RI KY  C  S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   ++ +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|449442823|ref|XP_004139180.1| (PREDICTED: cyclin-P3-1 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 5.1e-108
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 1

Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+NGMDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE  IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFH SRAPTM IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|659070359|ref|XP_008454704.1| (PREDICTED: cyclin-P3-1 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.5e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 1

Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|720000235|ref|XP_010255963.1| (PREDICTED: cyclin-P3-1-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56
Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LG++ESGK +  + R+LS+LSS+ E S+QKNEKLL  +KKKD VT+FHG RAPT+SI QY
Sbjct: 44  LGVTESGKGVTGTHRLLSLLSSLLERSVQKNEKLLDSMKKKDVVTVFHGLRAPTLSIHQY 103

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           IDRI KY+ C  SC VVAYIY++R+LQ+ D YLT+LN+HRLLITS+MVAAKF+D   +NN
Sbjct: 104 IDRIFKYSSCSPSCFVVAYIYMDRFLQRTDIYLTSLNVHRLLITSVMVAAKFLDDAFFNN 163

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLG 188
            +YAKVGGVS  EMN LE++FLF LDFRLHVT + F ++CL L+KE  G
Sbjct: 164 AYYAKVGGVSLAEMNRLEMKFLFTLDFRLHVTVETFKSYCLLLEKEAAG 212

BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|720000238|ref|XP_010255964.1| (PREDICTED: cyclin-P3-1-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56
Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 1

Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LG++ESGK +  + R+LS+LSS+ E S+QKNEKLL  +KKKD VT+FHG RAPT+SI QY
Sbjct: 19  LGVTESGKGVTGTHRLLSLLSSLLERSVQKNEKLLDSMKKKDVVTVFHGLRAPTLSIHQY 78

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           IDRI KY+ C  SC VVAYIY++R+LQ+ D YLT+LN+HRLLITS+MVAAKF+D   +NN
Sbjct: 79  IDRIFKYSSCSPSCFVVAYIYMDRFLQRTDIYLTSLNVHRLLITSVMVAAKFLDDAFFNN 138

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLG 188
            +YAKVGGVS  EMN LE++FLF LDFRLHVT + F ++CL L+KE  G
Sbjct: 139 AYYAKVGGVSLAEMNRLEMKFLFTLDFRLHVTVETFKSYCLLLEKEAAG 187

BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|743829719|ref|XP_011023596.1| (PREDICTED: cyclin-P3-1-like [Populus euphratica])

HSP 1 Score: 226.9 bits (577), Expect = 3.5e-56
Identity = 115/187 (61.50%), Postives = 148/187 (79.14%), Query Frame = 1

Query: 9   MDFQVETDSLLGLS-ESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHG 68
           M  + ET   LGLS ESG+ +  +PRVL +++SV E S+QKNEK     ++KD++TIFHG
Sbjct: 1   MAAESETFMALGLSDESGRGVSGTPRVLVLIASVLEKSLQKNEKQSTTSRRKDAITIFHG 60

Query: 69  SRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVA 128
           SR+PT+SI QYIDRI +Y+ C TSC VVAYIYI ++LQ+ DAYLT+LN+HRLLITSIMVA
Sbjct: 61  SRSPTLSITQYIDRIFRYSRCSTSCFVVAYIYINKFLQQTDAYLTSLNVHRLLITSIMVA 120

Query: 129 AKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLG 188
           AKF+D  CY+N +YA++GGVST EMN +E++FLFNLDFRLHVTA+VF   CL+L+ E   
Sbjct: 121 AKFLDDECYDNAYYARIGGVSTAEMNRMEMKFLFNLDFRLHVTAEVFMNCCLKLENESGK 180

Query: 189 VEN-QAD 194
            +N QAD
Sbjct: 181 YQNGQAD 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CCP31_ORYSJ6.5e-4747.14Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1[more]
CCU31_ARATH2.7e-4050.60Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2[more]
CCU11_ARATH5.2e-3648.73Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1[more]
CCU41_ARATH5.7e-3546.10Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
CCU42_ARATH1.3e-3442.31Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LJL5_CUCSA3.5e-10892.59Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021730 PE=4 SV=1[more]
A6YTD1_CUCME1.8e-10791.67Cyclin-dependent kinase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9RF55_RICCO3.1e-5663.22Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1431440 PE... [more]
U5FQW8_POPTR4.5e-5561.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02390g PE=4 SV=1[more]
F6HQ58_VITVI2.3e-5463.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00540 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G05327.15.0e-4548.45 Cyclin family protein[more]
AT3G63120.11.5e-4150.60 cyclin p1;1[more]
AT3G21870.12.9e-3748.73 cyclin p2;1[more]
AT2G44740.13.2e-3646.10 cyclin p4;1[more]
AT5G07450.17.2e-3642.31 cyclin p4;3[more]
Match NameE-valueIdentityDescription
gi|449442823|ref|XP_004139180.1|5.1e-10892.59PREDICTED: cyclin-P3-1 [Cucumis sativus][more]
gi|659070359|ref|XP_008454704.1|2.5e-10791.67PREDICTED: cyclin-P3-1 [Cucumis melo][more]
gi|720000235|ref|XP_010255963.1|2.0e-5664.50PREDICTED: cyclin-P3-1-like isoform X1 [Nelumbo nucifera][more]
gi|720000238|ref|XP_010255964.1|2.0e-5664.50PREDICTED: cyclin-P3-1-like isoform X2 [Nelumbo nucifera][more]
gi|743829719|ref|XP_011023596.1|3.5e-5661.50PREDICTED: cyclin-P3-1-like [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR013763Cyclin-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0019901 protein kinase binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G005380.1Lsi11G005380.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 88..168
score: 1.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 78..168
score: 2.8
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 54..167
score: 1.3
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 1..195
score: 5.3
NoneNo IPR availablePANTHERPTHR15615:SF20CYCLIN FAMILY PROTEIN-RELATEDcoord: 1..195
score: 5.3