Lsi11G005380 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTAAGATTTAGCTTCTTTTTCCATTTGAGTTTGAGATATTTTCTGATGGAATGAATCAATAGTTCATAAGCTATTATTTTAGAGTTAAAGAGGAAATTTCTCATCTGATATTGTTGTTAGAATCATTTAAATTTGTAATAACATAAACTGATCTGTTGGTCTGCTCGTATCGGATTCTGAAACCCAATTAAACCTCTTTCCCTTCTATTTTCTAAGAAACCTTCCCCCTTTTCTTCCCTTTCAAGTTATTGTCAATGTGAATCAATTGGTGGGGCGTCTCATTTGTTTACCTGCAAAACGTCTTGCTTCTGTACCAGGCTAAAGAACCATGTTTATCCTTTGTCGCCGTTTTTCTTATCTCTATGATTCAAATTTCTGAATAAAGTTTTAAGGAATATATGCAGCTTTAGAACCTGGCTTTTGAATCTGTTGGAAAATAGTCTATATACCTTGCAATAATGTAGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGTTTCTTTACCATTCACTATGGATTATGTATGAATTAAAGTAAATAAGATTTGTGTATATGCAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGGTAAGTTCTAATGTCGCTTAGTTACCGTGGCCCTGTTGTAATTCACTTAACATGAAAAGATTTCGAGCTTGGTTAATATTCTGCAGTTTAGTTTTTTCAGTTCACACCACACTAACTTTATTTCAGTTGCCTTCCCGTTCATCCATTGAACTGAGATCATGAGGAGGAATCCATAAGTTCAAGTTTATATAGCTGACATTTTTTTCAGTGAAAAATGAGCTAAATATATGATTCAATCCCTCATGTTTGGTTCATTTTTCAAATTTGTCCATAATCTAGAGGTTTCTGATTTTCTGTTCCTTTAACAAGTCTTCGTTTTATCACAAAAATGTTAAAATTTATAGATGAAGAACTGATGTCGAAATACACTCACGCTCACACTCACACGGCTTAGGTATACATTGTTCTTCTTTTAAAGTTAAATAGTGCTAAGTACTTGATTGAAACAATTCCATGTATAAAAGACAAAATTGAAAATTTTAAATGATTCTATACAAAATGTAATAGTGACTCAAACACTGCTTAGAAAGATATCAACAACCAGAGACCTTTTGTTCGATGCTGCTATATCGATATCGTGCATCTGATCTGTCATATTTCGAGATCCCTGAAAATTTTCTTCCAATTTCTTGGATGTTATAAAAATACTTTTTATGTATACACAACTTAATGTGTTAAGATGCTATGCAATGCAGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA ATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGA MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.5e-47 Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = 1
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2) HSP 1 Score: 166.8 bits (421), Expect = 2.7e-40 Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 1
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36 Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 1
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 5.7e-35 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Lsi11G005380 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34 Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 1
BLAST of Lsi11G005380 vs. TrEMBL
Match: A0A0A0LJL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021730 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 3.5e-108 Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 1
BLAST of Lsi11G005380 vs. TrEMBL
Match: A6YTD1_CUCME (Cyclin-dependent kinase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 1.8e-107 Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 1
BLAST of Lsi11G005380 vs. TrEMBL
Match: B9RF55_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1431440 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.1e-56 Identity = 110/174 (63.22%), Postives = 141/174 (81.03%), Query Frame = 1
BLAST of Lsi11G005380 vs. TrEMBL
Match: U5FQW8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02390g PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.5e-55 Identity = 109/177 (61.58%), Postives = 141/177 (79.66%), Query Frame = 1
BLAST of Lsi11G005380 vs. TrEMBL
Match: F6HQ58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00540 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54 Identity = 107/169 (63.31%), Postives = 136/169 (80.47%), Query Frame = 1
BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G05327.1 (AT3G05327.1 Cyclin family protein) HSP 1 Score: 178.3 bits (451), Expect = 5.0e-45 Identity = 94/194 (48.45%), Postives = 129/194 (66.49%), Query Frame = 1
BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G63120.1 (AT3G63120.1 cyclin p1;1) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41 Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 1
BLAST of Lsi11G005380 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1) HSP 1 Score: 152.5 bits (384), Expect = 2.9e-37 Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 1
BLAST of Lsi11G005380 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1) HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Lsi11G005380 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3) HSP 1 Score: 147.9 bits (372), Expect = 7.2e-36 Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 1
BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|449442823|ref|XP_004139180.1| (PREDICTED: cyclin-P3-1 [Cucumis sativus]) HSP 1 Score: 399.1 bits (1024), Expect = 5.1e-108 Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 1
BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|659070359|ref|XP_008454704.1| (PREDICTED: cyclin-P3-1 [Cucumis melo]) HSP 1 Score: 396.7 bits (1018), Expect = 2.5e-107 Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 1
BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|720000235|ref|XP_010255963.1| (PREDICTED: cyclin-P3-1-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56 Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|720000238|ref|XP_010255964.1| (PREDICTED: cyclin-P3-1-like isoform X2 [Nelumbo nucifera]) HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56 Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of Lsi11G005380 vs. NCBI nr
Match: gi|743829719|ref|XP_011023596.1| (PREDICTED: cyclin-P3-1-like [Populus euphratica]) HSP 1 Score: 226.9 bits (577), Expect = 3.5e-56 Identity = 115/187 (61.50%), Postives = 148/187 (79.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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