CsGy2G003970 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAATGTCTACCATTTTTCTAATTAAAAATGGATGATGGAAAGAGAAAGACTTCATCTTTACTTTCATACAAATCCAGTTTGTATGAAATCAATCAAATCCGACAAATCCCACAAACACCAAAAGAGTCCGACCCATATCTGATTTCTTACGAACGTGTGTTGCTTTTTTTCTCAAACCCCATTTCTTGTGCTACACTCCAAATTCCAATGAAACCCATCAAACCCCAAAATTTTCCCATTCCACCCAATTCATTTTCATCTCAAAGTTTCCCCCCATTTTCCTGGGCAAACAGACAAAATTCATCTGTCCAACACCACTTCTACAATCAACCTCACTCACCCGTTTCCATGGAACCACCTTTAAATCCTTTCTTTCCATTTCCGTTTGATCTGAAAACAGGATTCTCTATCCTTTTGTGCAAACCCCTTGTCAAGATTTGATCAGATAGCTCAGAATCCATCAATCTGTAAGCAAGTTTTTCTTACCCAACTTCAGAATCCAGATGGGTCTTTTCTGATTGTGATAATTAATATGTGAAGAGGGAGGGAAAAAAAAAATGAAGCAATGTGATGATGATTCTTGTTGCTGTTTTTCTGTCTTCTGGATTTGAACTTTGAACCGCACTTTCGGTTGTATAATGATTTTCCCCACATTTTGATTTCGAATTTGGGGTCCCCAAAAGGTAAGAGATGATGATAATCCTGCAAATTAATACCAACGAAAAGGAAACTTTATAGCTTTATGTGATTTTCTTGGAATTTTTGGCCTGCCAACAAGTCATTATTGTTGTTGTTTGTTCAGCCTCTGCTCATAGCTTAAAATTTCCATTGATTGATCTGTGCTTTTCACTTTAGTATTCTGGTAGAATGGAATCTCTATGTTCTGTTTCTTTCTCTCTCTGTGCTGGATATACCTCAGTGAGTATTCGATACTTTTTTCCCCTATAAGGTTTCTTAGATGAATGCTCCAAATGCTAATACTTTTCCATTGTGATTTGAAAGCTTGAATAATTGTGCCCAAATGGACCCAAATGACATTAAATATTTGTCCTTGGTGACTATACATGAAAGGAAAGAATAAATATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCGAACCAGAATCGTGAGAAATTGCTGTCTACAGGCCAGAGTTATGAATAAGCTTGTTTTCAAACCAACTTTCTCTTTCTCTTCTTATTAAGAACTACCTAGCTTTTCTGCCTGACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAACTGTAAGCCCTTTTTACTGGTGCATTTCAGGCATTTTATGTCTTCTTTTCTTCCTATATTTCCCCAAAATTGCCTGCCTCATGGTCTGTGAGCCACTTTCGTATACCGTTATTGTCTGATTTTCGTTAAGATCACCCCCTCTTTGTTCTTTGAAGCACATGACCAGTTGCCTCCGGAATTTGATATCGTTCAAATAATTATAGGTAAGATTTAGCTTCCTTTTTCCATTTGAGTTTGAGGTAATTTCTGATGGAATGAATCGTTCTCTTGTAAGCTATTACTTAGCTTTAGAGTTCAACGACCTAAAAAGATGAGATTTCTCATCAGATATTGTTAGAGTCATTTAAATTTCTAGTGACATTAACTGATCTGTGGGGTCTGCTGCACGTACCGGATTCAGAAATCTAATTAAACCTTTTACCCTTCTATTTTCTAAGAGACCTTTCCCCTTTTCTTCCCTTTCAAGTTATTGACGATGAGAATCAATTGGTGGCACCAAAGCATCTCATTTGTTTAGCTGCGAAACATCTAAAGAACCATGTTTTCTTATCTCTATGATTCAAATTTCTGAATAAGTTTTAAGGAATATATGCAGCTTTAGAAGTTGGCTTTTGAATCTGTTGGGGGAATAGTCTTTATACCTTGCAATAATGTTGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGCTTCTTTACCATTCACTATGGATTATGTATGAATTAAGCTATTAAAGTAAATAAGATTTGTGTATGTGCAGGTCTAGATAAACATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTAAGTTCTACTGTTGCTTAGTTAGTTGTAATTCATTTAAGATGAAAAGATTTTGAGCTTGGTTAATATTCTGCAGTTTAGTTTCTTTATAGTTCACATCACACTCACTTTACTTCAGTTGGCTTCCCCTTCATTCGTTGAACTGAGATCATGGGAGGAGGAATCCTTAAGTTCAAGTTTTTATAGATGACCTTTTTTTAGTGAAGAAAGATGAATATATGATTCAGTCCCTCATGTTTGCTTCATTTTTCAAAATTTGTCCACAATCATTTAAAGGTTTATGGTTATCTACTTTATTACCAAGCCTTTATTGTCACAAAAATGTTAAAATTTATTGATGAAAATATTTTATTGTACTCGCGTTGGATCCCCCACCCTACATATGTATATTAGAGAAAGACGCCCACCCACATCACACACATATACATTATTCTTCTATTAAAGTTCAATGATGCTAAGGACTTAATTATAGTCAAGATATGAAAGATAGAAATGAAAATTTTAAACGATTTTTATACAAAATGTAATAGTGATTCAAACACTGGTTTGAAAGATATCAATAGCTAGTGAGTTGTTTGTTCGATGCTGCTATACAGATACTGTGCATCTCATCAGTCATATTCTGAGATCTCTGAAAACTTCCTTCCAATTTCTTGGATGTTATAACAATACTTTTTATGTATACAATTACACAACTTAATGTGTTATGATTCTATGCAGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAAACACTCCCAATGAAATCTCCCTTTCTTGAATTTCATGGTTAGTTTAGTGTTTCAAAATCTGGAGTTGTATGGAATATTATATTTTATAAAGCTTCAATTCTTAGACTAAATCCAGAAAGTAAAAAGATTGTAGCAGGAAGAGGATGGGATTGTAGAGATTCAATGAAAAATGTTTCCAATGCATTGGAAATTTTTTATAATTCAATCATGATTGTTAGATGGATTCTTCAAACTTTTACTTTTTTATTTTAAATTTTTTTAACCGCTTCCGACCTATATTC AAATAATGTCTACCATTTTTCTAATTAAAAATGGATGATGGAAAGAGAAAGACTTCATCTTTACTTTCATACAAATCCAGTTTGTATGAAATCAATCAAATCCGACAAATCCCACAAACACCAAAAGAGTCCGACCCATATCTGATTTCTTACGAACGTGTGTTGCTTTTTTTCTCAAACCCCATTTCTTGTGCTACACTCCAAATTCCAATGAAACCCATCAAACCCCAAAATTTTCCCATTCCACCCAATTCATTTTCATCTCAAAGTTTCCCCCCATTTTCCTGGGCAAACAGACAAAATTCATCTGTCCAACACCACTTCTACAATCAACCTCACTCACCCGTTTCCATGGAACCACCTTTAAATCCTTTCTTTCCATTTCCGTTTGATCTGAAAACAGGATTCTCTATCCTTTTGTGCAAACCCCTTGTCAAGATTTGATCAGATAGCTCAGAATCCATCAATCTGTAAGCAAGTTTTTCTTACCCAACTTCAGAATCCAGATGGGTCTTTTCTGATTGTGATAATTAATATGTGAAGAGGGAGGGAAAAAAAAAATGAAGCAATGTGATGATGATTCTTGTTGCTGTTTTTCTGTCTTCTGGATTTGAACTTTGAACCGCACTTTCGGTTGTATAATGATTTTCCCCACATTTTGATTTCGAATTTGGGGTCCCCAAAAGGTAAGAGATGATGATAATCCTGCAAATTAATACCAACGAAAAGGAAACTTTATAGCTTTATGTGATTTTCTTGGAATTTTTGGCCTGCCAACAAGTCATTATTGTTGTTGTTTGTTCAGCCTCTGCTCATAGCTTAAAATTTCCATTGATTGATCTGTGCTTTTCACTTTAGTATTCTGGTAGAATGGAATCTCTATGTTCTGTTTCTTTCTCTCTCTGTGCTGGATATACCTCAGTGAGTATTCGATACTTTTTTCCCCTATAAGGTTTCTTAGATGAATGCTCCAAATGCTAATACTTTTCCATTGTGATTTGAAAGCTTGAATAATTGTGCCCAAATGGACCCAAATGACATTAAATATTTGTCCTTGGTGACTATACATGAAAGGAAAGAATAAATATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCGAACCAGAATCGTGAGAAATTGCTGTCTACAGGCCAGAGTTATGAATAAGCTTGTTTTCAAACCAACTTTCTCTTTCTCTTCTTATTAAGAACTACCTAGCTTTTCTGCCTGACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAACTGTAAGCCCTTTTTACTGGTGCATTTCAGGCATTTTATGTCTTCTTTTCTTCCTATATTTCCCCAAAATTGCCTGCCTCATGGTCTGTGAGCCACTTTCGTATACCGTTATTGTCTGATTTTCGTTAAGATCACCCCCTCTTTGTTCTTTGAAGCACATGACCAGTTGCCTCCGGAATTTGATATCGTTCAAATAATTATAGGTCTAGATAAACATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAAACACTCCCAATGAAATCTCCCTTTCTTGAATTTCATGGTTAGTTTAGTGTTTCAAAATCTGGAGTTGTATGGAATATTATATTTTATAAAGCTTCAATTCTTAGACTAAATCCAGAAAGTAAAAAGATTGTAGCAGGAAGAGGATGGGATTGTAGAGATTCAATGAAAAATGTTTCCAATGCATTGGAAATTTTTTATAATTCAATCATGATTGTTAGATGGATTCTTCAAACTTTTACTTTTTTATTTTAAATTTTTTTAACCGCTTCCGACCTATATTC ATGAGAGAAATGGCAAATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGAAAACTTATTTCGAGTTCTCCACAAGTTTTGTCAATTCTTTCCTCTGTTTTCGAGAAGTTGATTCAGAAAAATGAAAAGCTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACAATTTTCCACAGTTCCCGGGCTCCTACCATGGGCATTGGACAATATATCGATCGCATCTTGAAGTACACGTGTTGTGGAACTGCTTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAAACGGATGTTTACCTAACTTCTTTGAATGTCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCAAAGTTTATCGATGCTGGGTGCTATAACAATACTTTTTATGCCAAAGTAGGAGGAGTGAGTACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGACGTTTTCACTACTCATTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGCAGAGAATCAAGTCGAACGTCGACCCGGTAACAAAGCTCGAACTAAATGTTTGCCTCAAATTACAGGCTATACTTGCAGTGCCATTTAA MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKDSVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFTTHCLQLQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI
BLAST of CsGy2G003970 vs. NCBI nr
Match: XP_004139180.1 (PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011648812.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011648813.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011648814.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011648815.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011648816.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >KGN60902.1 hypothetical protein Csa_2G021730 [Cucumis sativus]) HSP 1 Score: 423.3 bits (1087), Expect = 4.9e-115 Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsGy2G003970 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo]) HSP 1 Score: 410.2 bits (1053), Expect = 4.3e-111 Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of CsGy2G003970 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 359.8 bits (922), Expect = 6.6e-96 Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0
BLAST of CsGy2G003970 vs. NCBI nr
Match: XP_022999267.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022999268.1 cyclin-P3-1-like [Cucurbita maxima]) HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93 Identity = 180/216 (83.33%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of CsGy2G003970 vs. NCBI nr
Match: XP_022150836.1 (cyclin-P3-1 [Momordica charantia] >XP_022150838.1 cyclin-P3-1 [Momordica charantia] >XP_022150839.1 cyclin-P3-1 [Momordica charantia] >XP_022150840.1 cyclin-P3-1 [Momordica charantia]) HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89 Identity = 172/216 (79.63%), Postives = 188/216 (87.04%), Query Frame = 0
BLAST of CsGy2G003970 vs. TAIR10
Match: AT3G05327.1 (Cyclin family protein) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43 Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 0
BLAST of CsGy2G003970 vs. TAIR10
Match: AT3G63120.1 (cyclin p1;1) HSP 1 Score: 161.0 bits (406), Expect = 8.2e-40 Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of CsGy2G003970 vs. TAIR10
Match: AT3G21870.1 (cyclin p2;1) HSP 1 Score: 151.0 bits (380), Expect = 8.5e-37 Identity = 81/174 (46.55%), Postives = 118/174 (67.82%), Query Frame = 0
BLAST of CsGy2G003970 vs. TAIR10
Match: AT5G07450.1 (cyclin p4;3) HSP 1 Score: 147.5 bits (371), Expect = 9.4e-36 Identity = 66/156 (42.31%), Postives = 112/156 (71.79%), Query Frame = 0
BLAST of CsGy2G003970 vs. TAIR10
Match: AT2G44740.1 (cyclin p4;1) HSP 1 Score: 144.8 bits (364), Expect = 6.1e-35 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0
BLAST of CsGy2G003970 vs. Swiss-Prot
Match: sp|Q75HV0|CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44 Identity = 92/168 (54.76%), Postives = 123/168 (73.21%), Query Frame = 0
BLAST of CsGy2G003970 vs. Swiss-Prot
Match: sp|Q8LB60|CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2) HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38 Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of CsGy2G003970 vs. Swiss-Prot
Match: sp|Q9LJ45|CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 81/174 (46.55%), Postives = 118/174 (67.82%), Query Frame = 0
BLAST of CsGy2G003970 vs. Swiss-Prot
Match: sp|Q9LY16|CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34 Identity = 66/156 (42.31%), Postives = 112/156 (71.79%), Query Frame = 0
BLAST of CsGy2G003970 vs. Swiss-Prot
Match: sp|O80513|CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0
BLAST of CsGy2G003970 vs. TrEMBL
Match: tr|A0A0A0LJL5|A0A0A0LJL5_CUCSA (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 3.2e-115 Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsGy2G003970 vs. TrEMBL
Match: tr|A0A1S3C004|A0A1S3C004_CUCME (Cyclin OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 2.8e-111 Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of CsGy2G003970 vs. TrEMBL
Match: tr|A6YTD1|A6YTD1_CUCME (Cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 2.8e-111 Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of CsGy2G003970 vs. TrEMBL
Match: tr|A0A1U8A3Z3|A0A1U8A3Z3_NELNU (Cyclin OS=Nelumbo nucifera OX=4432 GN=LOC104596482 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.4e-55 Identity = 107/169 (63.31%), Postives = 138/169 (81.66%), Query Frame = 0
BLAST of CsGy2G003970 vs. TrEMBL
Match: tr|A0A1U7ZR83|A0A1U7ZR83_NELNU (Cyclin OS=Nelumbo nucifera OX=4432 GN=LOC104596482 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.4e-55 Identity = 107/169 (63.31%), Postives = 138/169 (81.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |