Carg12901 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12901
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cyclin
Location	Cucurbita_argyrosperma_scaffold_043 : 1058121 .. 1060855 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTGATTTGAAAGCTTCAATAATTGTGTGCCCAAATGGACCCAAAGGACATGAAACAGTTGTCCTTGGTGACTATACCTGAAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCGAAGAAATGAACCAAACCAGAATCTAGAGAAATTGCTATCTACAGGCCAACGTTATGAAGAAGCTGATTTTAATACCAACTTTATCTTTCTCTGCTCATGATGAACTGCCTAGCTTTTCTGAAGAATGCTCAAGCAATATAGCCTGAGAGAAGGTTATTGAAGAAGCTCTGACTTACAAACCCCTTTTTCTGATGCATTTCAGGGTCTGTGAGCTACTTTTGTGTGCAGTTCTCCTCGGATCGTCCCCTCTTTGTTTGTCGAAGTAGTACACGAGCAGTTGCTTCCAGAACTTGATTTCTTCCAAAGAATTCTGGGTAAGATTTAGATTCTTGTTCCTTGTGTTTGAGATGATTTTTGATGGGATGAATAAATTGTTCATAAGCTATTACTTTAGTGTTCAATGGCTTGAAAAGAGGAGATTTCTCATCTGATATTGTTAGAATCATTTTGAACTTGAATCTGTTGGAAAATAGTTTGTGTGAGATCTTACGTCAGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTCCGTAGCAGACGCGTTTTAAAACCTTGAGGGGAAGTTCGGAAGGGAAAGCCCAAAGAAGACAATATCTAGTAACGATGGGCTTGGGCTCTTATAAATGGTATAAGAGCCAGACACCGGGCGATATGTTATCTAGAAGGAAAAGCCCAAAACGGACAATATCTGCTAGCAGTGGGCTTGAGTTTGGGTTGTTACAAATGGTATTAGAGCCAAACATCGGGCGATATGCCAGCGAGGAGGCGAAGCCCGAAAGGAAAGGTCCAAAGAGGGGAGGACGATATCAATAATGTAGGTTCTAATATTAGATTAAGAGGGACCCATGGGTATTATTTGATTGTTTCTATGCCATCAATTAAGGATTATGTATGAGTTAAGTAAATAATATTTGTGCATTATGCAGGTCTAGATAAACATGAGAAAGATGGCAGATAATGGTAAGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAGCTTATACCGAGCTCTTCTCGAGTGTTATCGATTCTTTCCTCTACGTTTGAGAGATCGATTCAGAAGAACGAAAAGTTGTTGAAAAGGCTCAAAAAGAAAGACAGTGTCACAATTTTCCATGGTTCCCGAGCGCCCACTATGAGCACTGGACAATATATCGATCGCATCTCGAAGTACACATGTTGTGGCACGCCTTGCTTAGTTGTTGCCTACATATACATCGAAAGGTATCTTCAAAAGATGGGTGCTTACCTTACTTCTTTGAATGTCCACCGCCTTTTGATCACTAGCATCATGGTTGCAGCGAAGTTTAACGACGCCGGGTAAGTTCTAATATCGCCTCGTTAGCTTAACTGTGTAATTAACTCGAGATGACAAGATTTTGAGATTGGAGATTATCTGCAGCTTAGTCTTTCCATTCATGCTCAACGCTTACTCTCTTTCAGTTGACTCACCCTTCATCAGTTCAGTTCAGGTTTACATATGTCAAGTCCACCGCTAACCGTTATTGGCCTTGGGCTTCCTCTCATAGTTTTAAAATGCGTCTACTAGGGAGAAGATTCCACACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAACCGACATGCGATCTCACAATCCACCCCCTTTTGGGCTAGCATCCTCACCGTCTAGGGATTGGCTCTATACCATTTGTAATAGCCCAAGCCCACCGTAAGCAAATATTGTCCTATTTGAGCTTTCCCTTCTGGGCTTCTCCTTGAGTTTTTAAAACGCATCTACTAGGGAGAGGTTTCTACACCCTTATAAAAGGAATGTTTCGTTCCCATCTCCAACCGATGTGGGATCTCACAATATAGTTGACCATTTTAGTAAAGAAATGGATTAAATAGATGATTTAGTCCCTCATGTTTGATTCATTCTTCAATTTTGTGCAATATAATAGTAACGTTAGAAGACAATGACATGCAACTCAAACCATTGAGTCACTTGTTCGATACTACTAAACCCGATATCGTGCATCTCATCTGTCATATTTTGGCATGCCTGTTTCCTCCTGATTTCTGGGATGTTATACACAACTTGTGCTATGCTATGCAGGTGCTATAACAATGCCTTTTATGCCAAGGTAGGAGGAGTGAGCACCAAAGAAATGAACAGCATGGAGATAGAATTGCTATTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTGTTCAGAGCTCACTGTTTGCAGCTCCAAAAGGAAGGTCTGGGGGAGAATCAAATTGATCGACGACCCGGGAACAAGACTCGAACGAGATGCTTACCTCAAATCGCAAGCTATACTTGCAGAGCCATTTAAACATTCCAAGAAATCTCTCTTGAATTTCATGGTTAGTTAGTGTTCTATCTTTATCAAGTGAACTGGAAAATTTTTATAATTCAATAATGCTTAATCACTTCTCCTTATGCTCACCGAGAAAAATTTGTAATTTTTTTTGGGAGTCCATGACTTCAAATCCTTGTCTTTCAGAACTGGACAATTAAAATGATAATAATAATAATAAAAAAATCTATTTCAATAAATAAAACAATTTTG

mRNA sequence

ATTGTGATTTGAAAGCTTCAATAATTGTGTGCCCAAATGGACCCAAAGGACATGAAACAGTTGTCCTTGGTGACTATACCTGAAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCGAAGAAATGAACCAAACCAGAATCTAGAGAAATTGCTATCTACAGGCCAACGTTATGAAGAAGCTGATTTTAATACCAACTTTATCTTTCTCTGCTCATGATGAACTGCCTAGCTTTTCTGAAGAATGCTCAAGCAATATAGCCTGAGAGAAGGTTATTGAAGAAGCTCTGACTTACAAACCCCTTTTTCTGATGCATTTCAGGGTCTGTGAGCTACTTTTGTGTGCAGTTCTCCTCGGATCGTCCCCTCTTTGTTTGTCGAAGTAGTACACGAGCAGTTGCTTCCAGAACTTGATTTCTTCCAAAGAATTCTGGGTCTAGATAAACATGAGAAAGATGGCAGATAATGGTAAGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAGCTTATACCGAGCTCTTCTCGAGTGTTATCGATTCTTTCCTCTACGTTTGAGAGATCGATTCAGAAGAACGAAAAGTTGTTGAAAAGGCTCAAAAAGAAAGACAGTGTCACAATTTTCCATGGTTCCCGAGCGCCCACTATGAGCACTGGACAATATATCGATCGCATCTCGAAGTACACATGTTGTGGCACGCCTTGCTTAGTTGTTGCCTACATATACATCGAAAGGTATCTTCAAAAGATGGGTGCTTACCTTACTTCTTTGAATGTCCACCGCCTTTTGATCACTAGCATCATGGTTGCAGCGAAGTTTAACGACGCCGGGTGCTATAACAATGCCTTTTATGCCAAGGTAGGAGGAGTGAGCACCAAAGAAATGAACAGCATGGAGATAGAATTGCTATTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTGTTCAGAGCTCACTGTTTGCAGCTCCAAAAGGAAGGTCTGGGGGAGAATCAAATTGATCGACGACCCGGGAACAAGACTCGAACGAGATGCTTACCTCAAATCGCAAGCTATACTTGCAGAGCCATTTAAACATTCCAAGAAATCTCTCTTGAATTTCATGGTTAGTTAGTGTTCTATCTTTATCAAGTGAACTGGAAAATTTTTATAATTCAATAATGCTTAATCACTTCTCCTTATGCTCACCGAGAAAAATTTGTAATTTTTTTTGGGAGTCCATGACTTCAAATCCTTGTCTTTCAGAACTGGACAATTAAAATGATAATAATAATAATAAAAAAATCTATTTCAATAAATAAAACAATTTTG

Coding sequence (CDS)

ATGAGAAAGATGGCAGATAATGGTAAGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAGCTTATACCGAGCTCTTCTCGAGTGTTATCGATTCTTTCCTCTACGTTTGAGAGATCGATTCAGAAGAACGAAAAGTTGTTGAAAAGGCTCAAAAAGAAAGACAGTGTCACAATTTTCCATGGTTCCCGAGCGCCCACTATGAGCACTGGACAATATATCGATCGCATCTCGAAGTACACATGTTGTGGCACGCCTTGCTTAGTTGTTGCCTACATATACATCGAAAGGTATCTTCAAAAGATGGGTGCTTACCTTACTTCTTTGAATGTCCACCGCCTTTTGATCACTAGCATCATGGTTGCAGCGAAGTTTAACGACGCCGGGTGCTATAACAATGCCTTTTATGCCAAGGTAGGAGGAGTGAGCACCAAAGAAATGAACAGCATGGAGATAGAATTGCTATTCAATTTGGACTTCAGACTTCATGTCACTGCAGATGTGTTCAGAGCTCACTGTTTGCAGCTCCAAAAGGAAGGTCTGGGGGAGAATCAAATTGATCGACGACCCGGGAACAAGACTCGAACGAGATGCTTACCTCAAATCGCAAGCTATACTTGCAGAGCCATTTAA

Protein sequence

MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLLITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI

Homology

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BLAST of Carg12901 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI
Sbjct: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

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BLAST of Carg12901 vs. NCBI nr
Match: XP_022999267.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022999268.1 cyclin-P3-1-like [Cucurbita maxima])

HSP 1 Score: 419.1 bits (1076), Expect = 9.2e-114
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MRKMADNGKDFQVET S+LGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETGSILGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           SVTIFHGSRAPTMSTGQYI+RISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYINRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKEG GENQIDRRPGNKTRTRCLPQIASYTCRAI
Sbjct: 181 LQKEGPGENQIDRRPGNKTRTRCLPQIASYTCRAI 215

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BLAST of Carg12901 vs. NCBI nr
Match: XP_022965918.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022965919.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965920.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965921.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965922.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965923.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965924.1 cyclin-P3-1-like [Cucurbita maxima] >XP_022965925.1 cyclin-P3-1-like [Cucurbita maxima])

HSP 1 Score: 367.1 bits (941), Expect = 4.1e-98
Identity = 181/215 (84.19%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           +RKMAD+G DF  ETDS LGL ESGK IPSS RVLSILSS FERSIQKNEKLLK+LK KD
Sbjct: 3   IRKMADSGNDFLAETDSPLGLGESGKPIPSSPRVLSILSSVFERSIQKNEKLLKKLKTKD 62

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           +VT+FHGSRAPTM  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLNVHRLL
Sbjct: 63  NVTVFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMDAYLTSLNVHRLL 122

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKFNDAGC+NN F+A+VGGVSTKEMN MEIE L NLDFRLHVTAD+FRAHCLQ
Sbjct: 123 ITSIMVAAKFNDAGCHNNTFFARVGGVSTKEMNRMEIEFLSNLDFRLHVTADIFRAHCLQ 182

Query: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKEG GEN I+ RP NKTR +CLPQIA YTCRA+
Sbjct: 183 LQKEGFGENPINHRPSNKTRAKCLPQIAGYTCRAV 217

[Close]

BLAST of Carg12901 vs. NCBI nr
Match: XP_022937500.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022937501.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937502.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937503.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937504.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937506.1 cyclin-P3-1-like [Cucurbita moschata] >XP_022937507.1 cyclin-P3-1-like [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 182/215 (84.65%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           +RKMAD   DF  ETDS  GL ESGK IPSS RVLSILSS FERSIQKNEKLLK+LK KD
Sbjct: 3   IRKMADGDIDFLAETDSPRGLGESGKPIPSSPRVLSILSSVFERSIQKNEKLLKKLKTKD 62

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           +VT+FHGSRAPTM  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKM AYLTSLNVHRLL
Sbjct: 63  NVTVFHGSRAPTMGIGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMDAYLTSLNVHRLL 122

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKFNDAGC+NN F+AKVGGVSTKEMN MEIE L NLDFRLHVTAD FRAHCLQ
Sbjct: 123 ITSIMVAAKFNDAGCHNNTFFAKVGGVSTKEMNRMEIEFLSNLDFRLHVTADAFRAHCLQ 182

Query: 181 LQKEGLGENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKEG GEN ID RPGNKTR +CLPQIA YTCRA+
Sbjct: 183 LQKEGFGENPIDHRPGNKTRAKCLPQIAGYTCRAV 217

[Close]

BLAST of Carg12901 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 364.4 bits (934), Expect = 2.7e-97
Identity = 184/216 (85.19%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MR+MA+N  DFQVETDSLLGLSESGKLI SS +VLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           +VTIFH SRAPTM  GQYIDRI KYTCCGT CL+VAYIYIERYLQKM  YLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKE L GENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Carg12901 vs. TAIR10
Match: AT3G05327.1 (Cyclin family protein)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-43
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 19  LGLSESGKLIPSSS--RVLSILSSTFERSIQKNEKLL-KRLKKKDSVTIFHGSRAPTMST 78
           LGL E     P S+  RV+++L+ST E+ IQKN+K    R  K D +T+FHGS+AP++S 
Sbjct: 16  LGLLEDSDQPPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSI 75

Query: 79  GQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGA-----YLTSLNVHRLLITSIMVAAKF 138
            +Y +RI +Y  C   C V A+ YI RYLQ+  A      LTSLNVHRLLITS++VAAKF
Sbjct: 76  YRYTERIHRYAQCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKF 135

Query: 139 NDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
            +  CYNNA+YAK+GGVST+EMN +E   L ++DFRL++T + F  HCL LQKE
Sbjct: 136 LERQCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189

[Close]

BLAST of Carg12901 vs. TAIR10
Match: AT3G63120.1 (cyclin p1;1)

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-41
Identity = 85/174 (48.85%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 19  LGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQY 78
           LGL   GK +     VLS LSS+ ERS+  N      L   DSVT+F G   P +S   Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLLITSIMVAAKFNDAGCYNN 138
           +DRI KY+CC   C V+A+IYI+ +L K  A L  LNVHRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 AFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKEGLGENQID 193
           A+YA+VGGV+T+E+N +E+ELLF LDF+L V    F  HC QL+K+     QI+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

[Close]

BLAST of Carg12901 vs. TAIR10
Match: AT3G21870.1 (cyclin p2;1)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-36
Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 30  SSSRVLSILSSTFERSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSTGQYIDRISKYTCC 89
           ++ RVL+I+S   E+ + +NE L K+ K    S+  FHG RAP++S  +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTPCLVVAYIYIERYLQK-MGAYLTSLNVHRLLITSIMVAAKFNDAGCYNNAFYAKVGGV 149
              C VV Y+YI+R   K  G+ + SLNVHRLL+T +M+AAK  D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           S  ++N ME+ELLF LDFR+ V+  VF ++C  L+KE
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]

BLAST of Carg12901 vs. TAIR10
Match: AT2G44740.1 (cyclin p4;1)

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 73/154 (47.40%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 32  SRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQYIDRISKYTCCGTP 91
           S++++ LSS  ER  + N+   +   +   V++FHG   PT++   Y++RI KY  C   
Sbjct: 11  SKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPS 70

Query: 92  CLVVAYIYIERYLQKMGAY-LTSLNVHRLLITSIMVAAKFNDAGCYNNAFYAKVGGVSTK 151
           C VVAY+Y++R+  +  +  + S NVHRLLITS+MVAAKF D   YNNA+YAKVGG+STK
Sbjct: 71  CFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTK 130

Query: 152 EMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           EMN +E++ LF L F L+VT + F A+   LQKE
Sbjct: 131 EMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]

BLAST of Carg12901 vs. TAIR10
Match: AT5G07450.1 (cyclin p4;3)

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-33
Identity = 67/175 (38.29%), Postives = 113/175 (64.57%), Query Frame = 0


Query: 11  FQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRA 70
           +Q++   +       +++P+   V++ +SS  +R  + N+ L +  ++   ++ F+    
Sbjct: 3   YQIDQKMIHDQEPMAEIMPN---VITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTK 62

Query: 71  PTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAY-LTSLNVHRLLITSIMVAAK 130
           P++S   Y++RI KY  C   C +VAYIY++R++QK     + S NVHRL+ITS++V+AK
Sbjct: 63  PSISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAK 122

Query: 131 FNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           F D  CYNNAFYAKVGG++T+EMN +E++ LF + F+L+VT   +  +C  LQ+E
Sbjct: 123 FMDDLCYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

[Close]

BLAST of Carg12901 vs. Swiss-Prot
Match: sp|Q75HV0|CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.2e-45
Identity = 94/166 (56.63%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 19  LGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQY 78
           L +S+S K      +VL +L++  +RS+QKNE LL   K KDS TIFHG RAP +S   Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLLITSIMVAAKFNDAGCYNN 138
            +RI KY+ C   C V+A IY+ERYLQ+   Y+TSL+VHRLLITS++VAAKF D   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 AFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           AFYA+VGG+ST EMN +E++LLFNLDFRL V  + F ++CLQL+KE
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKE 188

[Close]

BLAST of Carg12901 vs. Swiss-Prot
Match: sp|Q8LB60|CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-39
Identity = 85/174 (48.85%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 19  LGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQY 78
           LGL   GK +     VLS LSS+ ERS+  N      L   DSVT+F G   P +S   Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLLITSIMVAAKFNDAGCYNN 138
           +DRI KY+CC   C V+A+IYI+ +L K  A L  LNVHRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 AFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKEGLGENQID 193
           A+YA+VGGV+T+E+N +E+ELLF LDF+L V    F  HC QL+K+     QI+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIE 192

[Close]

BLAST of Carg12901 vs. Swiss-Prot
Match: sp|Q9LJ45|CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-35
Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = 0


Query: 30  SSSRVLSILSSTFERSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSTGQYIDRISKYTCC 89
           ++ RVL+I+S   E+ + +NE L K+ K    S+  FHG RAP++S  +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTPCLVVAYIYIERYLQK-MGAYLTSLNVHRLLITSIMVAAKFNDAGCYNNAFYAKVGGV 149
              C VV Y+YI+R   K  G+ + SLNVHRLL+T +M+AAK  D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           S  ++N ME+ELLF LDFR+ V+  VF ++C  L+KE
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]

BLAST of Carg12901 vs. Swiss-Prot
Match: sp|O80513|CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-34
Identity = 73/154 (47.40%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 32  SRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSTGQYIDRISKYTCCGTP 91
           S++++ LSS  ER  + N+   +   +   V++FHG   PT++   Y++RI KY  C   
Sbjct: 11  SKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPS 70

Query: 92  CLVVAYIYIERYLQKMGAY-LTSLNVHRLLITSIMVAAKFNDAGCYNNAFYAKVGGVSTK 151
           C VVAY+Y++R+  +  +  + S NVHRLLITS+MVAAKF D   YNNA+YAKVGG+STK
Sbjct: 71  CFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTK 130

Query: 152 EMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           EMN +E++ LF L F L+VT + F A+   LQKE
Sbjct: 131 EMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKE 164

[Close]

BLAST of Carg12901 vs. Swiss-Prot
Match: sp|Q9LY16|CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.8e-32
Identity = 67/175 (38.29%), Postives = 113/175 (64.57%), Query Frame = 0


Query: 11  FQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRA 70
           +Q++   +       +++P+   V++ +SS  +R  + N+ L +  ++   ++ F+    
Sbjct: 3   YQIDQKMIHDQEPMAEIMPN---VITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTK 62

Query: 71  PTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAY-LTSLNVHRLLITSIMVAAK 130
           P++S   Y++RI KY  C   C +VAYIY++R++QK     + S NVHRL+ITS++V+AK
Sbjct: 63  PSISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAK 122

Query: 131 FNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKE 185
           F D  CYNNAFYAKVGG++T+EMN +E++ LF + F+L+VT   +  +C  LQ+E
Sbjct: 123 FMDDLCYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

[Close]

BLAST of Carg12901 vs. TrEMBL
Match: tr|A0A1S3C004|A0A1S3C004_CUCME (Cyclin OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97
Identity = 184/216 (85.19%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MR+MA+N  DFQVETDSLLGLSESGKLI SS +VLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           +VTIFH SRAPTM  GQYIDRI KYTCCGT CL+VAYIYIERYLQKM  YLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKE L GENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Carg12901 vs. TrEMBL
Match: tr|A6YTD1|A6YTD1_CUCME (Cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97
Identity = 184/216 (85.19%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MR+MA+N  DFQVETDSLLGLSESGKLI SS +VLSILSS FERSIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           +VTIFH SRAPTM  GQYIDRI KYTCCGT CL+VAYIYIERYLQKM  YLTSLNVHRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGL-GENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKE L GENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Carg12901 vs. TrEMBL
Match: tr|A0A0A0LJL5|A0A0A0LJL5_CUCSA (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 184/216 (85.19%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           MR+MA+NG DFQVETDSLLGLSESGKLI SS +VLSILSS FE+ IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
           SVTIFH SRAPTM  GQYIDRI KYTCCGT CLVVAYIYIERYLQK   YLTSLNVHRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 216
           LQKE LG ENQ++RRPGNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Carg12901 vs. TrEMBL
Match: tr|B9RF55|B9RF55_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1431440 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.4e-56
Identity = 115/180 (63.89%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 14  ETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKDSVTIFHGSRAPTM 73
           ET S LGL ESG  I  + RVL +L+S  ERS QKN++LL+  ++KD VT+FHGSR+P++
Sbjct: 8   ETYSALGLYESGGRISGTPRVLLLLASVLERSTQKNDRLLEGSRRKDVVTVFHGSRSPSL 67

Query: 74  STGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLLITSIMVAAKFNDA 133
           S  QYI+R+ KYT C T C VVAYIY+ER+L++M A LTSLNVHRLLITSIM+AAKF D 
Sbjct: 68  SIRQYIERVFKYTKCSTSCFVVAYIYVERFLRRMDACLTSLNVHRLLITSIMLAAKFLDD 127

Query: 134 GCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQLQKEGLGENQIDR 193
            CYNNA+YAKVGGVST EMN ME +LLFNLDFRL VT + FR++CL+L++E  GE +I+R
Sbjct: 128 ECYNNAYYAKVGGVSTPEMNRMETKLLFNLDFRLQVTVEAFRSYCLKLERECGGEYRIER 187

[Close]

BLAST of Carg12901 vs. TrEMBL
Match: tr|A0A1U8A3Z3|A0A1U8A3Z3_NELNU (Cyclin OS=Nelumbo nucifera OX=4432 GN=LOC104596482 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 113/193 (58.55%), Postives = 143/193 (74.09%), Query Frame = 0


Query: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60
           M K+    +    E    LG++ESGK +  + R+LS+LSS  ERS+QKNEKLL  +KKKD
Sbjct: 1   MEKLTLGSETVDSELYLALGVTESGKGVTGTHRLLSLLSSLLERSVQKNEKLLDSMKKKD 60

Query: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120
            VT+FHG RAPT+S  QYIDRI KY+ C   C VVAYIY++R+LQ+   YLTSLNVHRLL
Sbjct: 61  VVTVFHGLRAPTLSIHQYIDRIFKYSSCSPSCFVVAYIYMDRFLQRTDIYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180
           ITS+MVAAKF D   +NNA+YAKVGGVS  EMN +E++ LF LDFRLHVT + F+++CL 
Sbjct: 121 ITSVMVAAKFLDDAFFNNAYYAKVGGVSLAEMNRLEMKFLFTLDFRLHVTVETFKSYCLL 180

Query: 181 LQKEGLGENQIDR 194
           L+KE  G  +I+R
Sbjct: 181 LEKEAAGGYKIER 193

The following BLAST results are available for this feature:

BLAST of Carg12901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946012.1	3.4e-116	100.00	cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit...	[more]
XP_022999267.1	9.2e-114	98.14	cyclin-P3-1-like [Cucurbita maxima] >XP_022999268.1 cyclin-P3-1-like [Cucurbita ...	[more]
XP_022965918.1	4.1e-98	84.19	cyclin-P3-1-like [Cucurbita maxima] >XP_022965919.1 cyclin-P3-1-like [Cucurbita ...	[more]
XP_022937500.1	2.1e-97	84.65	cyclin-P3-1-like [Cucurbita moschata] >XP_022937501.1 cyclin-P3-1-like [Cucurbit...	[more]
XP_008454704.1	2.7e-97	85.19	PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu...	[more]

BLAST of Carg12901 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05327.1	3.5e-43	52.87	Cyclin family protein	[more]
AT3G63120.1	9.7e-41	48.85	cyclin p1;1	[more]
AT3G21870.1	2.5e-36	49.68	cyclin p2;1	[more]
AT2G44740.1	3.6e-35	47.40	cyclin p4;1	[more]
AT5G07450.1	4.3e-33	38.29	cyclin p4;3	[more]

BLAST of Carg12901 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q75HV0\|CCP31_ORYSJ	6.2e-45	56.63	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
sp\|Q8LB60\|CCU31_ARATH	1.7e-39	48.85	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
sp\|Q9LJ45\|CCU11_ARATH	4.4e-35	49.68	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
sp\|O80513\|CCU41_ARATH	6.4e-34	47.40	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
sp\|Q9LY16\|CCU42_ARATH	7.8e-32	38.29	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]

BLAST of Carg12901 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C004\|A0A1S3C004_CUCME	1.8e-97	85.19	Cyclin OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1	[more]
tr\|A6YTD1\|A6YTD1_CUCME	1.8e-97	85.19	Cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A0A0LJL5\|A0A0A0LJL5_CUCSA	1.5e-96	85.19	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1	[more]
tr\|B9RF55\|B9RF55_RICCO	3.4e-56	63.89	Cyclin-dependent protein kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_14...	[more]
tr\|A0A1U8A3Z3\|A0A1U8A3Z3_NELNU	2.2e-55	58.55	Cyclin OS=Nelumbo nucifera OX=4432 GN=LOC104596482 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0019901	protein kinase binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR012389	Cyclin_P/U
IPR013922	Cyclin_PHO80-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0019901	protein kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12901-RA	Carg12901-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 50..167 e-value: 3.1E-29 score: 102.3
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 28..212 e-value: 2.8E-47 score: 163.2
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 14..187
None	No IPR available	PANTHER	PTHR15615:SF40	CYCLIN FAMILY PROTEIN	coord: 14..187
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 9..212 e-value: 1.3E-63 score: 212.6
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 78..168

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12901	Cla019886	Watermelon (97103) v1	carwmB0907
Carg12901	Csa2G021730	Cucumber (Chinese Long) v2	carcuB0917
Carg12901	MELO3C004272	Melon (DHL92) v3.5.1	carmeB0893
Carg12901	ClCG02G015840	Watermelon (Charleston Gray)	carwcgB0883
Carg12901	CSPI02G03900	Wild cucumber (PI 183967)	carcpiB0938
Carg12901	Cucsa.091520	Cucumber (Gy14) v1	carcgyB1020
Carg12901	CmaCh05G011410	Cucurbita maxima (Rimu)	carcmaB1246
Carg12901	CmaCh12G010740	Cucurbita maxima (Rimu)	carcmaB1241
Carg12901	CmoCh05G011530	Cucurbita moschata (Rifu)	carcmoB1216
Carg12901	CmoCh12G010890	Cucurbita moschata (Rifu)	carcmoB1212
Carg12901	Lsi11G005380	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12901	Cp4.1LG11g09330	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12901	Cp4.1LG07g09070	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12901	CsGy2G003970	Cucumber (Gy14) v2	carcgybB0890
Carg12901	MELO3C004272.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12901	CsaV3_2G005220	Cucumber (Chinese Long) v3	carcucB0940
Carg12901	Cla97C02G041600	Watermelon (97103) v2	carwmbB0946
Carg12901	Bhi05G001643	Wax gourd	carwgoB1046

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12901	Carg17546	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12901	Watermelon (97103) v2	carwmbB0949