Lsi11G001980 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G001980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPhospholipase A2
Locationchr11 : 2026072 .. 2029076 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGCAACACTAGCATTTCCATTCCCAAACATCTCTCATCCGCCATTCTCCTTCTCCTCCTTCTTCTCGCCGTCGTCTCCGACTGTTCCAACAACGAATCCCGGGTAATAATCTCAACCTTTCGTGTTTTCAATAACTAAATGCTGGAGCATTCGAATCTTAGATTCGTACATTTGGATCTTCAATTTCCTTCCTTTCTTTCAATGTCACAACCTTCGCGTAATGTGAAATTCAGTTTGTTTGGTTTCTGTTCAACGATTTCGATGTTAACGTCAATATTTCGTTGGATGATAGGTTGAATGCAGCAGAACTTGTGTTGCAATTAACTGCAATAGTGAGTGTATTTTGGAATTTATGTGAACTTCGTCTTCTGTTATTACTGTTTTTTGAATTTTAGTTTCTTCCTTGCATATTTATTTTGGTCGTTTATCTGAAATTTAGCTGTTGGGATTCGGTACGGAAAGTTCTGCGGAGTAGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGTTATTGCCAATCTATAACTACATTACCTAATTAATCTGTCCTTTGTTTACTTCGCATTGTTTGCCATCGATCTATAATCCTGTTTTACTCTTTAGTTGTTGTGAGGTCTAATCGGGTGAAATCCGGGCATCCTCTTGTTGCATCAACACCTTCTTTTTTTTTTCTTTCTTTTGGTGTTGGGGGGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGGGGGGGGGGGGGGGGGGGGGCGCATTATTGGTATGTTCTCTGCTGCATACCTTGTAAAGATACGCATGAGATTGAAATTTCAACTACAATGTCTATCCCTTGAGAATGAAGGGAGCAGCAACTAGTCATCAACAACCCAAAAAATTGGGTGTTAGTATCCACGATTAACGGGTGGGCACCCCCCTCGTTTTCGTGCTCCTTAGATCATTTCCGATTTCAAATAAAATTCCCGTTGAATTCTTCATCCTCAGCACCTAGGTTAAACTGAGCAATTGCAAAATTCTAGAATTTAGGAGCGTATATCACTTGTTAAGGACAACTAATGGTTAACATATCTACGATGGGATGATGGTGGCCACTTTGGTCATAAGCCCAAATGATTCTGTTTTTTTATTACACCCAAAATACCACATACTAATGGTGATGGTTGTCCTCATATGTGGCCATGATCTTCTCCTTCCATAGTCAATGTCAGACTTTGGTCGCATTCCTAACTATACTCTCCTCAAACAAAGTACTATTGAGCCTCCCTGTTCTAAGACTCATCACTTCTTTGTTTGGCACCTGAACTCTATTAGTCTGCCTAAGTCAATGGCGTGACTCTGGTACTATAACAAGAATTAGAAAGAGAGAGAAGAGTGAATAACAGTGATCATAGAAGTATTATGCTATCCAATGGAGTTAGAAAACATTATTTTCATAATTAGAATTCTCTCTCAACTTGTCTCATCAGGTACAGTTGTAACAAGATCTTAACAATCAATGAGCTCTCTTAAGTCTTAGCACTGTTGCTGTGTTAGCCACACTAATAATGGAAGAAAGGGTAATGAGTTGCTCTGTCATATGCAATGACCAGTGACGCTTTGATTCCATTCTGCTAAAATCACTGAAGGAGAAAACAGTATCCCACTAACTTTTATGTCCGCTCACTTATTAGTTATGTTCACTATATTGAGCAAGTGAGACCAGTTCTGGACACTTGTCCTTGTGAATGGTGAAAGTAGTCTCGTAAAATTAAATTAATATAAAATTAATTGTTACGTGTACTTAGCAGCAAAATATTCTTTGAGTCCCGAAAGTTCTACTGTTATGTCAGATTCGTGATGCCACAAGGTTAATGTGCTTCCTGGCATGGAGAGGCTGATTTTCATCCTCAAAATGCCTGTGCGGGCTATAATGGACCACTCCCGTTTGTATATGGATTTTTTTGACAGACGACAAAGCATGGTTGAAATAGTCTATTATGTTCTTCACAACTTTGAAGTAGAATCCTTCGTGCCATTAACTTTGGTTTAGGATGACCAAGCGTCACATATTATTCCCTTTTCAAATGCATGTTTGCAGTAAGGACGTTGAACACTTGTTCCTCCATTGTAGTGATCATTGAGTGGATTACATCAGTAAAAGCCTATGAATAAGTCAGTTATTTATATTATGCACATAGTAGACTTCTGTTTATTACGGATCAGTTAAGCTATCGGCCTACTGGCAATTGAAAAACAAAACTAGATACAAAATTGGAGGATATTTGAGGCATGGCCAATTGGCATGTTAAACACAGAGGAGACACTAGACCAATGTCTGGTGTTGGTAAATTCTAGATCTTAGATCTTAGATGCTTGTGATTTATCTCAGATACTTCATATTTGAAACTTGTAGCATTAGATTAGAGAAGGAGACCAAGCAATTTATATATATTGGTCTATCCTGTTTTGTTTTGTTTCTGATTTGTGTGGAATTATAACAGTTGGAACTTGGGAGTCACTCTGTTTAATATGTTTCAAGACCAATAACCTCTATCACATGGGTTTTTCAGGTTTAACTAATATTAAATGTCACGAGAAGTTCAAGACTTGTATAAAGAGAGTGCAGAAATCTGGGAAGGTTGGTTTCTCACAGGAGTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGCATGGATTTGGCTATCATGTTCAGCCAATTTGGTAACTCAAAGCTTGAGCTCTGA

mRNA sequence

ATGGCCCGCAACACTAGCATTTCCATTCCCAAACATCTCTCATCCGCCATTCTCCTTCTCCTCCTTCTTCTCGCCGTCGTCTCCGACTGTTCCAACAACGAATCCCGGGTTGAATGCAGCAGAACTTGTGTTGCAATTAACTGCAATACTGTTGGGATTCGGTACGGAAAGTTCTGCGGAGTAGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGTTTAACTAATATTAAATGTCACGAGAAGTTCAAGACTTGTATAAAGAGAGTGCAGAAATCTGGGAAGGTTGGTTTCTCACAGGAGTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGCATGGATTTGGCTATCATGTTCAGCCAATTTGGTAACTCAAAGCTTGAGCTCTGA

Coding sequence (CDS)

ATGGCCCGCAACACTAGCATTTCCATTCCCAAACATCTCTCATCCGCCATTCTCCTTCTCCTCCTTCTTCTCGCCGTCGTCTCCGACTGTTCCAACAACGAATCCCGGGTTGAATGCAGCAGAACTTGTGTTGCAATTAACTGCAATACTGTTGGGATTCGGTACGGAAAGTTCTGCGGAGTAGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGTTTAACTAATATTAAATGTCACGAGAAGTTCAAGACTTGTATAAAGAGAGTGCAGAAATCTGGGAAGGTTGGTTTCTCACAGGAGTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGCATGGATTTGGCTATCATGTTCAGCCAATTTGGTAACTCAAAGCTTGAGCTCTGA

Protein sequence

MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPYSTAVPTMVQGMDLAIMFSQFGNSKLEL
Homology
[Close]
BLAST of Lsi11G001980 vs. Swiss-Prot
Match: PLA21_ORYSJ (Probable phospholipase A2 homolog 1 OS=Oryza sativa subsp. japonica GN=PLA2-I PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.4e-46
Identity = 79/134 (58.96%), Postives = 105/134 (78.36%), Query Frame = 1 

Query: 15  SAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDD 74
           S +L L+ L A V   + +     CSR+C A+NC++VGIRYGK+CGVGW+GC GE+PCDD
Sbjct: 5   SPLLALVFLAAGVLSSATSPPPPPCSRSCAALNCDSVGIRYGKYCGVGWSGCDGEEPCDD 64

Query: 75  LDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPYSTAVPTMVQGMDL 134
           LDACC+ HD CV++KGL ++KCHEKFK C+++V+K+GK+GFS++CPY  A+ TM  GMD+
Sbjct: 65  LDACCRDHDHCVDKKGLMSVKCHEKFKNCMRKVKKAGKIGFSRKCPYEMAMATMTSGMDM 124

Query: 135 AIMFSQFGNSKLEL 149
           AIM SQ G  KLEL
Sbjct: 125 AIMLSQLGTQKLEL 138

[Close]
BLAST of Lsi11G001980 vs. Swiss-Prot
Match: PLA2B_ARATH (Phospholipase A2-beta OS=Arabidopsis thaliana GN=PLA2-BETA PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-40
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 1 

Query: 38  ECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCH 97
           EC+RTC+A NC+T+ IRYGK+CG+G +GC GE+PCDDLDACCK+HD CVE  G+TNI CH
Sbjct: 30  ECTRTCIAQNCDTLSIRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCVELNGMTNISCH 89

Query: 98  EKFKTCIKRV------QKSGKVGFSQECPYSTAVPTMVQGMDLAIMFSQFGNS-KLEL 149
           +KF+ C+ R+       K+ KVGFS +CPYS  +PT+ QGMD+ I+FSQ GN  K EL
Sbjct: 90  KKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGILFSQLGNDMKTEL 147

[Close]
BLAST of Lsi11G001980 vs. Swiss-Prot
Match: PLA2C_ARATH (Phospholipase A2-gamma OS=Arabidopsis thaliana GN=PLA2-GAMMA PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.2e-37
Identity = 71/132 (53.79%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 18  LLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDA 77
           L   LLLAVVS      S+ +CS TC+A NCN++GIRYGK+CG+G+ GC GE PCDDLDA
Sbjct: 14  LTAFLLLAVVS------SQEKCSNTCIAQNCNSLGIRYGKYCGIGYFGCPGEPPCDDLDA 73

Query: 78  CCKVHDECVERKGLTNIKCHEKFKTCIKRVQKS------GKVGFSQECPYSTAVPTMVQG 137
           CC  HD CV+ KG+T + CH++FK C+ ++ KS       K+GFS +CPYS  +PT+  G
Sbjct: 74  CCMTHDNCVDLKGMTYVNCHKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSIVIPTVFNG 133

Query: 138 MDLAIMFSQFGN 144
           MD  I FS  GN
Sbjct: 134 MDYGIFFSGIGN 139

[Close]
BLAST of Lsi11G001980 vs. Swiss-Prot
Match: PLA2D_ARATH (Phospholipase A2-delta OS=Arabidopsis thaliana GN=PLA2-DELTA PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-35
Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 1 

Query: 18  LLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDA 77
           L + LLLAVV       S+ +CS+TC+A  CN +GIRYGK+CG+G+ GC GE PCDDLD 
Sbjct: 14  LTVFLLLAVV------HSQEKCSKTCIAQKCNVLGIRYGKYCGIGYFGCPGEPPCDDLDD 73

Query: 78  CCKVHDECVERKGLTNIKCHEKFKTCIKRVQKS------GKVGFSQECPYSTAVPTMVQG 137
           CC  HD CV+ KG+T + CH++F+ C+  +++S       KVGFS+ECPYST +PT+ +G
Sbjct: 74  CCMTHDNCVDLKGMTYVDCHKQFQRCVNELKQSIQESNNQKVGFSKECPYSTVIPTVYRG 133

Query: 138 MDLAIMFSQFGN 144
           M+  I FS  GN
Sbjct: 134 MNYGIFFSGIGN 139

[Close]
BLAST of Lsi11G001980 vs. Swiss-Prot
Match: PLA23_ORYSJ (Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica GN=PLA2-III PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-15
Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 1 

Query: 39  CSRTCVAINCNTVGI-RYGKFCGVGWTGCAGEKPCDDLDACCKVHDECVERKG-LTNIKC 98
           CSRTC + +C T  + RYGK+CG+ ++GC GE+PCD+LDACC  HD CV+ K    +  C
Sbjct: 55  CSRTCESDHCTTPPLLRYGKYCGILYSGCPGEQPCDELDACCMHHDNCVQAKNDYLSTAC 114

Query: 99  HEKFKTCIKRVQKSGKVGFSQECPYSTAVPTMVQGMDLAIM 138
           +E+   C+ R+++        +C     +  +   ++ A++
Sbjct: 115 NEELLECLARLREGSSTFQGNKCMIDEVIDVISLVIEAAVV 155

[Close]
BLAST of Lsi11G001980 vs. TrEMBL
Match: A0A0A0LFR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000560 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-69
Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           MARNT ISI        LLLLLLL VVS CSNNESRVECSRTCVAINCNTVGIRYGKFCG
Sbjct: 1   MARNTIISI--------LLLLLLLTVVSHCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGCAGEKPCDDLDACCKVHDECVERKGLTN+KCHEKFK+CIK+VQKSGKVGFS +CP
Sbjct: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNVKCHEKFKSCIKKVQKSGKVGFSNDCP 120

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           YSTAVPTMVQGM+LAIMFS+FGNSKLEL
Sbjct: 121 YSTAVPTMVQGMNLAIMFSKFGNSKLEL 140

[Close]
BLAST of Lsi11G001980 vs. TrEMBL
Match: W9QS24_9ROSA (Putative phospholipase A2-1-like protein OS=Morus notabilis GN=L484_027241 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-58
Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 1 

Query: 7   ISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGC 66
           + +   +++   ++L+ L VV+ CSNN+S V CS+ CVA NCN+VGIRYGKFCGVGWTGC
Sbjct: 8   VPVRTRVAAGFAVVLISLTVVAHCSNNDSEVRCSKICVAENCNSVGIRYGKFCGVGWTGC 67

Query: 67  AGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPYSTAVP 126
            GEKPCDDLDACCK+HDECV +KGLTN+KCHEKFK+CIKRVQKSGKVGFS+ CPY TAVP
Sbjct: 68  PGEKPCDDLDACCKIHDECVTKKGLTNVKCHEKFKSCIKRVQKSGKVGFSRVCPYKTAVP 127

Query: 127 TMVQGMDLAIMFSQFGNSKLEL 149
           TMVQGMDLAI+ SQFGNSK EL
Sbjct: 128 TMVQGMDLAILLSQFGNSKAEL 149

[Close]
BLAST of Lsi11G001980 vs. TrEMBL
Match: M5VSB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012884mg PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-58
Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           M+R+  +      ++A  +++  L  V+ CSNN+S V CSR CVA NCN+VGIRYGK+CG
Sbjct: 3   MSRDAGLRRTTSFAAAFAVVIFSLIAVARCSNNDSEVTCSRICVAENCNSVGIRYGKYCG 62

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGC GEKPCDDLDACCK+HD+CV +KG+T+IKCHEKFKTCIK+VQKSGKVGFSQ+CP
Sbjct: 63  VGWTGCPGEKPCDDLDACCKIHDDCVGKKGMTDIKCHEKFKTCIKKVQKSGKVGFSQQCP 122

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           Y TAVPTMVQGMDLAIM SQF NSKLEL
Sbjct: 123 YETAVPTMVQGMDLAIMLSQFSNSKLEL 150

[Close]
BLAST of Lsi11G001980 vs. TrEMBL
Match: A0A059CMG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00921 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-57
Identity = 98/125 (78.40%), Postives = 114/125 (91.20%), Query Frame = 1 

Query: 24  LAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDACCKVHD 83
           +A ++DCS + S+V CSRTC A NC+T+GIRYGK+CGVGWTGC GEKPCDDLDACCK+HD
Sbjct: 16  IAALADCSGDGSQVRCSRTCAAENCDTIGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHD 75

Query: 84  ECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPYSTAVPTMVQGMDLAIMFSQFGN 143
           ECVE+KG+TN+KCHEKFKTCIK+VQKSGK  FS+ECPY TAVPTMVQGMD+AI+FSQ GN
Sbjct: 76  ECVEKKGMTNVKCHEKFKTCIKKVQKSGKTSFSRECPYETAVPTMVQGMDMAILFSQIGN 135

Query: 144 SKLEL 149
           SKLEL
Sbjct: 136 SKLEL 140

[Close]
BLAST of Lsi11G001980 vs. TrEMBL
Match: D7TBB1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02570 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.8e-56
Identity = 104/147 (70.75%), Postives = 124/147 (84.35%), Query Frame = 1 

Query: 2   ARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGV 61
           A  TSI+     S  +++++     V+D SNN S+++CS+ CVA NCN+VGIRYGKFCGV
Sbjct: 6   ANRTSIAASLATSVVVVVVVAFFFAVADSSNN-SQIKCSKACVAENCNSVGIRYGKFCGV 65

Query: 62  GWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPY 121
           GWTGC GEKPCDDLDACCK+HDECVE+KGL +IKCHEKFKTCIKRVQKSGKVGFS+ECP+
Sbjct: 66  GWTGCPGEKPCDDLDACCKIHDECVEKKGLISIKCHEKFKTCIKRVQKSGKVGFSRECPF 125

Query: 122 STAVPTMVQGMDLAIMFSQFGNSKLEL 149
            TAVPTMVQGMD+AI+ SQ G+SKLEL
Sbjct: 126 ETAVPTMVQGMDMAILLSQLGSSKLEL 151

[Close]
BLAST of Lsi11G001980 vs. TAIR10
Match: AT2G19690.2 (AT2G19690.2 phospholipase A2-beta)

HSP 1 Score: 159.5 bits (402), Expect = 1.6e-39
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 1 

Query: 38  ECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCH 97
           EC+RTC+A NC+T+ IRYGK+CG+G +GC GE+PCDDLDACCK+HD CVE  G+TNI CH
Sbjct: 30  ECTRTCIAQNCDTLSIRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCVELNGMTNISCH 89

Query: 98  EKFKTCIKRV------QKSGKVGFSQECPYSTAVPTMVQGMDLAIMFSQ 141
           +KF+ C+ R+       K+ KVGFS +CPYS  +PT+ QGMD+ I+FSQ
Sbjct: 90  KKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGILFSQ 138

[Close]
BLAST of Lsi11G001980 vs. TAIR10
Match: AT4G29460.1 (AT4G29460.1 Phospholipase A2 family protein)

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-38
Identity = 71/132 (53.79%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 18  LLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDA 77
           L   LLLAVVS      S+ +CS TC+A NCN++GIRYGK+CG+G+ GC GE PCDDLDA
Sbjct: 14  LTAFLLLAVVS------SQEKCSNTCIAQNCNSLGIRYGKYCGIGYFGCPGEPPCDDLDA 73

Query: 78  CCKVHDECVERKGLTNIKCHEKFKTCIKRVQKS------GKVGFSQECPYSTAVPTMVQG 137
           CC  HD CV+ KG+T + CH++FK C+ ++ KS       K+GFS +CPYS  +PT+  G
Sbjct: 74  CCMTHDNCVDLKGMTYVNCHKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSIVIPTVFNG 133

Query: 138 MDLAIMFSQFGN 144
           MD  I FS  GN
Sbjct: 134 MDYGIFFSGIGN 139

[Close]
BLAST of Lsi11G001980 vs. TAIR10
Match: AT4G29470.1 (AT4G29470.1 Phospholipase A2 family protein)

HSP 1 Score: 150.2 bits (378), Expect = 9.9e-37
Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 1 

Query: 18  LLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGCAGEKPCDDLDA 77
           L + LLLAVV       S+ +CS+TC+A  CN +GIRYGK+CG+G+ GC GE PCDDLD 
Sbjct: 14  LTVFLLLAVV------HSQEKCSKTCIAQKCNVLGIRYGKYCGIGYFGCPGEPPCDDLDD 73

Query: 78  CCKVHDECVERKGLTNIKCHEKFKTCIKRVQKS------GKVGFSQECPYSTAVPTMVQG 137
           CC  HD CV+ KG+T + CH++F+ C+  +++S       KVGFS+ECPYST +PT+ +G
Sbjct: 74  CCMTHDNCVDLKGMTYVDCHKQFQRCVNELKQSIQESNNQKVGFSKECPYSTVIPTVYRG 133

Query: 138 MDLAIMFSQFGN 144
           M+  I FS  GN
Sbjct: 134 MNYGIFFSGIGN 139

[Close]
BLAST of Lsi11G001980 vs. TAIR10
Match: AT2G06925.1 (AT2G06925.1 Phospholipase A2 family protein)

HSP 1 Score: 73.9 bits (180), Expect = 9.0e-14
Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1 

Query: 38  ECSRTCVAINCNTVG-IRYGKFCGVGWTGCAGEKPCDDLDACCKVHDECVERKG--LTNI 97
           ECSR C +  C+    +RYGK+CG+ ++GC GE+PCD LD+CC  HD CV+ K     + 
Sbjct: 37  ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDSCCMKHDACVQSKNNDYLSQ 96

Query: 98  KCHEKFKTCIKRVQKSGKVGF-SQECPYSTAVPTMVQGMDLAIM 138
           +C +KF  C+    +  +  F   +C     +  +   M+ A++
Sbjct: 97  ECSQKFINCMNNFSQKKQPTFKGNKCDADEVIDVISIVMEAALI 140

[Close]
BLAST of Lsi11G001980 vs. NCBI nr
Match: gi|659071327|ref|XP_008459246.1| (PREDICTED: probable phospholipase A2 homolog 1 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 4.4e-71
Identity = 133/148 (89.86%), Postives = 138/148 (93.24%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           MARNT ISI        LLLLLLL VVSDCSNNESRVECSRTCVA+NCNTVGIRYGKFCG
Sbjct: 1   MARNTIISI--------LLLLLLLTVVSDCSNNESRVECSRTCVAVNCNTVGIRYGKFCG 60

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGCAGEKPCDDLDACCKVHDECVERKGLTN+KCHEKFK+CIK+VQKSGKVGFS+ECP
Sbjct: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNVKCHEKFKSCIKKVQKSGKVGFSKECP 120

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           YSTAVPTMVQGMDLAIMFSQFGNSKLEL
Sbjct: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 140

[Close]
BLAST of Lsi11G001980 vs. NCBI nr
Match: gi|449446576|ref|XP_004141047.1| (PREDICTED: probable phospholipase A2 homolog 1 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 7.1e-69
Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           MARNT ISI        LLLLLLL VVS CSNNESRVECSRTCVAINCNTVGIRYGKFCG
Sbjct: 1   MARNTIISI--------LLLLLLLTVVSHCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGCAGEKPCDDLDACCKVHDECVERKGLTN+KCHEKFK+CIK+VQKSGKVGFS +CP
Sbjct: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNVKCHEKFKSCIKKVQKSGKVGFSNDCP 120

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           YSTAVPTMVQGM+LAIMFS+FGNSKLEL
Sbjct: 121 YSTAVPTMVQGMNLAIMFSKFGNSKLEL 140

[Close]
BLAST of Lsi11G001980 vs. NCBI nr
Match: gi|703075191|ref|XP_010090011.1| (putative phospholipase A2-1-like protein [Morus notabilis])

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 1 

Query: 7   ISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCGVGWTGC 66
           + +   +++   ++L+ L VV+ CSNN+S V CS+ CVA NCN+VGIRYGKFCGVGWTGC
Sbjct: 8   VPVRTRVAAGFAVVLISLTVVAHCSNNDSEVRCSKICVAENCNSVGIRYGKFCGVGWTGC 67

Query: 67  AGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECPYSTAVP 126
            GEKPCDDLDACCK+HDECV +KGLTN+KCHEKFK+CIKRVQKSGKVGFS+ CPY TAVP
Sbjct: 68  PGEKPCDDLDACCKIHDECVTKKGLTNVKCHEKFKSCIKRVQKSGKVGFSRVCPYKTAVP 127

Query: 127 TMVQGMDLAIMFSQFGNSKLEL 149
           TMVQGMDLAI+ SQFGNSK EL
Sbjct: 128 TMVQGMDLAILLSQFGNSKAEL 149

[Close]
BLAST of Lsi11G001980 vs. NCBI nr
Match: gi|645274635|ref|XP_008242433.1| (PREDICTED: probable phospholipase A2 homolog 1 [Prunus mume])

HSP 1 Score: 233.0 bits (593), Expect = 3.3e-58
Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           M+R+  +      ++A  +++  L  V+ CSNN+S V CSR CVA NCN+VGIRYGK+CG
Sbjct: 3   MSRDAGLRRTTRFAAAFAVVIFSLIAVARCSNNDSEVTCSRICVAENCNSVGIRYGKYCG 62

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGC GEKPCDDLDACCK+HD+CV +KG+T+IKCHEKFKTCIK+VQKSGKVGFSQ+CP
Sbjct: 63  VGWTGCPGEKPCDDLDACCKIHDDCVGKKGMTDIKCHEKFKTCIKKVQKSGKVGFSQQCP 122

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           Y TAVPTMVQGMDLAIM SQF NSKLEL
Sbjct: 123 YETAVPTMVQGMDLAIMLSQFSNSKLEL 150

[Close]
BLAST of Lsi11G001980 vs. NCBI nr
Match: gi|595808123|ref|XP_007202722.1| (hypothetical protein PRUPE_ppa012884mg [Prunus persica])

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-58
Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = 1 

Query: 1   MARNTSISIPKHLSSAILLLLLLLAVVSDCSNNESRVECSRTCVAINCNTVGIRYGKFCG 60
           M+R+  +      ++A  +++  L  V+ CSNN+S V CSR CVA NCN+VGIRYGK+CG
Sbjct: 3   MSRDAGLRRTTSFAAAFAVVIFSLIAVARCSNNDSEVTCSRICVAENCNSVGIRYGKYCG 62

Query: 61  VGWTGCAGEKPCDDLDACCKVHDECVERKGLTNIKCHEKFKTCIKRVQKSGKVGFSQECP 120
           VGWTGC GEKPCDDLDACCK+HD+CV +KG+T+IKCHEKFKTCIK+VQKSGKVGFSQ+CP
Sbjct: 63  VGWTGCPGEKPCDDLDACCKIHDDCVGKKGMTDIKCHEKFKTCIKKVQKSGKVGFSQQCP 122

Query: 121 YSTAVPTMVQGMDLAIMFSQFGNSKLEL 149
           Y TAVPTMVQGMDLAIM SQF NSKLEL
Sbjct: 123 YETAVPTMVQGMDLAIMLSQFSNSKLEL 150

The following BLAST results are available for this feature:
BLAST of Lsi11G001980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLA21_ORYSJ8.4e-4658.96Probable phospholipase A2 homolog 1 OS=Oryza sativa subsp. japonica GN=PLA2-I PE... [more]
PLA2B_ARATH6.9e-4060.17Phospholipase A2-beta OS=Arabidopsis thaliana GN=PLA2-BETA PE=1 SV=1[more]
PLA2C_ARATH4.2e-3753.79Phospholipase A2-gamma OS=Arabidopsis thaliana GN=PLA2-GAMMA PE=1 SV=1[more]
PLA2D_ARATH1.8e-3551.52Phospholipase A2-delta OS=Arabidopsis thaliana GN=PLA2-DELTA PE=2 SV=1[more]
PLA23_ORYSJ4.5e-1535.64Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica GN=PLA2-III PE=1 SV=1[more]
BLAST of Lsi11G001980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFR9_CUCSA4.9e-6987.84Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000560 PE=3 SV=1[more]
W9QS24_9ROSA1.8e-5873.24Putative phospholipase A2-1-like protein OS=Morus notabilis GN=L484_027241 PE=3 ... [more]
M5VSB4_PRUPE3.0e-5870.95Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012884mg PE=3 SV=1[more]
A0A059CMG1_EUCGR2.5e-5778.40Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00921 PE=3 SV=1[more]
D7TBB1_VITVI4.8e-5670.75Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02570 PE=3 SV=... [more]
BLAST of Lsi11G001980 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19690.21.6e-3960.55 phospholipase A2-beta[more]
AT4G29460.12.4e-3853.79 Phospholipase A2 family protein[more]
AT4G29470.19.9e-3751.52 Phospholipase A2 family protein[more]
AT2G06925.19.0e-1434.62 Phospholipase A2 family protein[more]
BLAST of Lsi11G001980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071327|ref|XP_008459246.1|4.4e-7189.86PREDICTED: probable phospholipase A2 homolog 1 [Cucumis melo][more]
gi|449446576|ref|XP_004141047.1|7.1e-6987.84PREDICTED: probable phospholipase A2 homolog 1 [Cucumis sativus][more]
gi|703075191|ref|XP_010090011.1|2.5e-5873.24putative phospholipase A2-1-like protein [Morus notabilis][more]
gi|645274635|ref|XP_008242433.1|3.3e-5870.95PREDICTED: probable phospholipase A2 homolog 1 [Prunus mume][more]
gi|595808123|ref|XP_007202722.1|4.3e-5870.95hypothetical protein PRUPE_ppa012884mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016042lipid catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0004623phospholipase A2 activity
Vocabulary: INTERPRO
TermDefinition
IPR016090Phospholipase A2 domain
IPR001211PLipase_A2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006412 translation
biological_process GO:0043967 histone H4 acetylation
biological_process GO:0006348 chromatin silencing at telomere
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006644 phospholipid metabolic process
biological_process GO:0050482 arachidonic acid secretion
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0016042 lipid catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000781 chromosome, telomeric region
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0004623 phospholipase A2 activity
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0010485 H4 histone acetyltransferase activity
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G001980.1Lsi11G001980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001211Phospholipase A2PANTHERPTHR11716PHOSPHOLIPASE A2coord: 1..145
score: 7.1
IPR016090Phospholipase A2 domainGENE3DG3DSA:1.20.90.10coord: 47..104
score: 1.
IPR016090Phospholipase A2 domainunknownSSF48619Phospholipase A2, PLA2coord: 37..144
score: 2.23
NoneNo IPR availablePANTHERPTHR11716:SF47PROTEIN C07E3.9coord: 1..145
score: 7.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G001980Csa2G000560Cucumber (Chinese Long) v2culsiB098
Lsi11G001980CSPI02G00550Wild cucumber (PI 183967)cpilsiB096
Lsi11G001980Cucsa.116920Cucumber (Gy14) v1cgylsiB163
Lsi11G001980CmaCh05G013900Cucurbita maxima (Rimu)cmalsiB715
Lsi11G001980CmoCh05G013930Cucurbita moschata (Rifu)cmolsiB706
Lsi11G001980Cla016824Watermelon (97103) v1lsiwmB116
Lsi11G001980MELO3C004617Melon (DHL92) v3.5.1lsimeB116
Lsi11G001980ClCG11G001840Watermelon (Charleston Gray)lsiwcgB078
Lsi11G001980MELO3C004617.2Melon (DHL92) v3.6.1lsimedB124
Lsi11G001980Cla97C11G208250Watermelon (97103) v2lsiwmbB074
Lsi11G001980Bhi06G001427Wax gourdlsiwgoB100
Lsi11G001980Cp4.1LG11g11590Cucurbita pepo (Zucchini)cpelsiB074
Lsi11G001980CsGy2G000520Cucumber (Gy14) v2cgyblsiB089
Lsi11G001980Carg10813Silver-seed gourdcarlsiB514
Lsi11G001980CsaV3_2G001580Cucumber (Chinese Long) v3cuclsiB108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G001980Cucumber (Chinese Long) v3cuclsiB011
Lsi11G001980Watermelon (97103) v2lsiwmbB091
Lsi11G001980Watermelon (97103) v2lsiwmbB102
Lsi11G001980Wax gourdlsiwgoB140
Lsi11G001980Bottle gourd (USVL1VR-Ls)lsilsiB059
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB049
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB102
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB157
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB159
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB228
Lsi11G001980Cucurbita maxima (Rimu)cmalsiB402
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB035
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB088
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB146
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB148
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB216
Lsi11G001980Cucurbita moschata (Rifu)cmolsiB387
Lsi11G001980Cucurbita pepo (Zucchini)cpelsiB282
Lsi11G001980Cucurbita pepo (Zucchini)cpelsiB527
Lsi11G001980Cucurbita pepo (Zucchini)cpelsiB658
Lsi11G001980Cucurbita pepo (Zucchini)cpelsiB660
Lsi11G001980Wild cucumber (PI 183967)cpilsiB013
Lsi11G001980Cucumber (Chinese Long) v2culsiB013
Lsi11G001980Melon (DHL92) v3.5.1lsimeB103
Lsi11G001980Watermelon (Charleston Gray)lsiwcgB103
Lsi11G001980Watermelon (Charleston Gray)lsiwcgB115
Lsi11G001980Watermelon (97103) v1lsiwmB092
Lsi11G001980Watermelon (97103) v1lsiwmB096
Lsi11G001980Cucumber (Gy14) v2cgyblsiB010
Lsi11G001980Melon (DHL92) v3.6.1lsimedB109
Lsi11G001980Silver-seed gourdcarlsiB083
Lsi11G001980Silver-seed gourdcarlsiB175
Lsi11G001980Silver-seed gourdcarlsiB812
Lsi11G001980Silver-seed gourdcarlsiB815