CSPI02G00550 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G00550
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description60S ribosomal protein L28, putative
LocationChr2 : 327527 .. 333451 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGCAACACCATCATTTCCATTCTCCTTCTCCTCCTTCTTCTCACCGTCGTCTCCCACTGTTCCAACAACGAATCCCGGGTAATTATCTCAACCTGTAAGCATTAGAATCTTAGATCCTTCAATTTGGATCTTCACTTTCCTTCATTTCTTTCTTTCTCTCAATTGGTTCAATCCCGCAACCTCCATGTGATTTGAAATTCAGCTTCTCATTGATTTCTACGTTAATGTCAAAATTTCGTTGCTTGATAGGTTGAATGTAGCAGAACTTGTGTTGCAATTAACTGCAATAGTGAGTTTATTTTGTAATTTATGTGAAATTCATCTTCTTCTGTTGTTACCTTTTTCTTTTATAAAAAAATTTAGTTTCTTCTTTACGTATTTATCTTGCTCATTTGTCTGAAATTTAGCTGTTGGGATTCGGTACGGAAAGTTTTGCGGAGTTGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGTTATTGCCAATCTATAACTACGTGGCCTTAATATTATGGCCTTTCCTTCCTTCGCATTGTTTGCCATTCCTCATAACTATACTTGCATAGAAAGTTGTCCCATCGATCTACAATCCTGTTTTACTTTTTAGTTGTTGTGAGGTCTAATAGGGTGAAATCCTGTTGCTGTATCAACCTTTTTTTTTTGGGACATTATTGGTATGTTCTATGCTGCATACTTTGCAAAAAATACGTATGAGATTCAAATAGTCAACTAGAGTTTCCATCCCAAGAAAGGGTAGCAGCAACCAGTTTTCAACAAACCAAAAAATTGGGTGTTCGTATCTAACAGGTATGGAAGGTAGATTATAAGAAGCGAATATTACTTTCTCAACATGATTTTTATGGATAGAGGTATCAACAGTGATTGGCAAGTGGGAATAGATAACTTCCCCCTTGTTTTTGAGTTCTAAGGAGATAACTTCCCCCTTGTTGCCAATTTTGGTCATGAGCCCAAAGAATTTGTTTTTTTAAAAAAAAAAATTCACCCAAAGTACCATACACTAATGGAGATAGTTCTCCACACATTTACCTAAGATATTCTCCTCAATGTGGGACTTTTGTTGCTTTCCCAACTATCCTCTTCTTAAATAAACTACCATGGAGCCTCTCTTGTTCTAAGGCTCACCATTTGGCTTAGTCTCAAAGAGAAAGAAGAGTGAATGAAAGTAGGCGATCATAAAAGTACCATAAAATAGGACACTGAAAACAATATTAACTTACAATACAACTGAACACCACAGCAAATGAATAAAGATAAAGTTGTAACAAGCTCTTCACAATCAATCAACTCTCTTAATTAACACTTTTGGCTTCTAAATTTGCTTTTGTTGTTGAGCAAGAAATCAGTGAATCATGAAACTCTAAGCCACCAATCAAACCCTACCCACATACATCAGTGCATCCCATACAAACCTACCCACAGAGATGGGCTACTTACTCACGAGGGAACTGCTCTCATATGGTTTAGTCCATACTTATGAGTTGCTGGGTTGGCCGTAGTTATACTAATAATGATCAATTGGCATGTTAAACACAAAGGGGACTATGCCAATGTCTGGTGTTGGTAAATTCTAGCTCTTAGATCTTAGATGCTTGTGATTTATCTGAGATACTACATATTTGAAACATGTAGCATTAGATTAGAGAAGGAAGCTTAGCAATTTATATATATCGGTCTATCCTGTTCTGTTTCATTTCTTTACGCTTCATCATGATTTGGGTGGTATTATAACAATTGGAACTTGGGAGTCACTTTGTTCAATATGTTTGAAGGCCAATAACCTCTATCACATGGGTTTTTCAGGTTTAACTAATGTAAAATGTCACGAGAAGTTCAAGAGTTGTATTAAGAAAGTGCAGAAATCTGGAAAGGTTGGTTTCTCTAACGACTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGTATGAATTTGGCTATCATGTTCAGCAAATTTGGTAACTCAAAGCTTGAGCTCTGATACCCACTTCTGTCGGTAACTCACTCCTTCGTCCACAGCCACAGTTCATGCCATCAATTATTGCATATGGGAAAACTGCACACAAATGATTCATTCATTGAAATAATGTTCTACAGAATTAAGAAATGTCAAACAGAAAATTAAATCCTCATTTTTGTCCTGGTTAGTTGTAAGTTGGACCATCTGAATTTTTAGGGATGCTTCTAGCTTAGTGAAAGAAGATACCCCATATACTTAATTATTTTTAGGCTCCTTCAATAGTTGTTAGATGTTGGTTTTCCCGCAATTCATTTTTAAGTACTCACCATTGGGCAATACATTTTTTAGAGTCTTGCAGATTGTCTTTAGATGTCATCTCTCTTTTCATTTTAACGCTACTTTTGTTGCTGTTCTAGTGCTGTCCTACACATGGAGATTCAATGTATTGTTTTATTTAGTGATTCAATTTTGAATGATATGTTCGAATGAAGTCACTACATGAGATTTCTTATTTATTTATTCATACAATAACTATATCACCCAAATGTTTGTAACATATTGATCAATATAGTCTTGTATCATTTGAAATAATATAAAAAATATACTAACAAATGATGAAATGTTAAGCATTTTTATATTCGTTGCAAAATTACAATATTACAATATTACAACACCTTTCATAAATGTTTTTAAATTATTTTATTAGAATATTAGACAAAAATTAAAACCGTAATACGTTATGAAATAAAAAGTTATAGTAATTTATTAACAAAATTCTAATAAATCTCTATTTTGAAGTGGTTTTATGAAAAGTATTAATTTCAAAACACTTGCAATAAATATAATATAAATGAAAAGAGAAGGAAAAATAGAGGGGCGTTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAACGCCCTTTTTGTTTAAAACAAGTAATGACGAATTATACGGATGCAGGTTTTGTCTTTTAAATTATTAACTTAGGGTTTTTTTGGCAGTAAAGCTTCCACTATATATAATATCAGTTGGGGCTCAAGAAAGCGGCAGACGGAACCGGCGTCCTCTCTTCTGCTTCACCATCTCCCTCCATTCGTTGCACCGCAGGTCTGTTAGTTATTGGCCTTTCAGATCTCCATTTTTTCTGATTTTTCATCGTTTATATCTCACATCAACTTCCATCTTTACTTTTGTTATTGATCTCCGTCATCAATCTTCGAAATAGATTTTTTTCTTCTTCATTGGGTGATCTTTTTTAATAAATAAAGTAAGTTGTTTTGTAGATGGCGAACGTTCCGGGGCAGTTGGTATGGGAAATCGTTAAGAAGAACAGCTCTTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCCAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCTGGTAAGATCCAATACTTTTATCATTTTGAATAGTTAAACGTTGGAAATGATTGACCTTTTTGTTATGTACTTTCTTATTGAGGAGGAAGTATTTTATCTTGCTTTTGTTTTAGTGTGTTCGGTTTGTTACTAGTTTGGTTATGGAACTTCATTTGGGTGTTTTTTTTCAGGGTTGGCAAATCGTAAGACGGTGACCATTCAGCCTGGAGGCAAAGATTTGTCAGTATTGCTCGCCACGTCAAAGACGAAGAAACAGAACAAACCAGCAAATTCGCTTCACAAATCCGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCTGTGATTAATCAGGTAACTAGCGTTTCCAGATTGTCTCGTTTATGCCCATCGAGATGAAATTTGTGTTTCTGAAGTCCGATCATTCTTTACATGTTGTCAATACTGCCTGTAGTTGTCATTGGCCGTGTATGGTTTGTCATCTTGTAATTATTCTGCTGAATATTCTGTGACATTTTCCCGTTCTTCAATCTTTTGATACAAGATCCGAGATTCAATTCTCATCAACTTCATCATGTTAACACTTGGGATGCTATGCTTTTCTTTCTCCTTTTAGGATTAAGATTAAGAAGTAGTCAGTAATGTATTTCTGTTTTATTGTTTTATTAGAAATTGGATTTGATACAAATATGATATTGAATGTGCATTGTTGCAGTGACGAGAAGCTAACATGTAAGAAGGGCTGCTTTTGTAGCGGCATCTTCGATGAAATATATTTGTTACGCTTGGCTTCTGAGCACAAATTTTCATTTTCTACCATATTAAGACTGTTTTCATGTAAGGAGGTGACTTCTATTGTGTATTTCTGATGAAATCTATTTCTTACGGTTGGCTTCATCTGTTTTACCCAAATCTTCCTAATGTGGCATAATGTGAAACTTCTATTAGCAGAAATTTAATGGAATGACTTGGGGTGGGCAAACATTTTAGATGAACCTTGTTTTGTGATGATGAGCTGCTAACATGTTAGAAGGGGTCACTTTTGTAGTGGCGTCTTCAATGAGATATATTTGTTACGCTTGGCTTCTGAGCATTATTCTCATCTTGGCTGTAAGCAGCTTCTATCGTTTAATGGTTTTGCGTGATTGATGTATCCCTGATTATATTCCTTAGAGCTTTGTTGTTGGAAGTTTTTCTCATCATCCCATTGTTGCACTAACTCTCCTCTTGGCCGAAAGCAACTTTTACTCTTACTGTGATGATGAGCTGCTAACATGTAAGAAGAGGTCACTTTTGTAGTGGCCTCTTCAATGAGATATATTTGTTACGCTTGGCTTCTGAGCATTATTCTCATCTTGGCTGTAAGCAGCTTCTATCTTTTAATGGTTTTGCTTGCTTGATGTATCTCTAATTATATTCCTTAGAGCATTGTTGAAGTTTTTCTCATCATCCCATTGTTGAAGTTTTTCTCATCATCCCATTGTTGCACTAGTTCTCCTCTTGGCCGATAACAACTTTTACTCTCACTGTGATGATGAGCTGCTAACATGTAAGAAGAGGTCACTTTTGTAGTGGCCTCTTCAGTGAAATCTATTTGTTACGCTTGGCTTCTGAGCATTAATTCTCCTCTTGGCCGAAAACAACCTCTACCTTTTATTTGTTTTGCTTGATTGGATCTCTGATTATGTTCCCTAACGCTTGCTTGATGTAATTTTCCATAACTTCCTGTAGCATTATATCAAACTTAAACTGTTACTGCGATGATGAGCTGCTAACATGTAAGAAGGTGTTGCTTTTGTAGTGGCATCTTCAGTGAAATCTTTTTGTTACGCTTGGCTTCTGAGCAATAAATTATCAAATGAATGTGGTTAAGAGTCTTTATTCAGTCTTTATTCTAGTATACTAGTGAAGGTTTGTATATTGTTATCTTCTTATTGTTACTTCAGTTAGTTTGTTGCTAAACTTGGAGTGCACTTAATTATTTTGCAGGTCGCTGACAACTACTACCGCCCAGACTTGAAGAATGCTGCCCTTGCTAAGCTAAGCGCAGTGCACAGGAGCCTCAAGGTCGCCAAATCAGGTGTGAAGAAGAGGAACAGACAGAGTGTTACCCGCGGTAGGAAGTGAAACAATGGTTCATAAGGAAATTTTCTTCTATTTGAGTTTTTTTTTAACCCTGTTTTCTATTTTATAGAGAGACATCTAGAGGGCTTTTCTTTAATTTCAAATTTTCTGTACCCTACTTGAAAATTGAGATTTTTGACGATTTTGGTTTATCTTTGAGCACTTGCCCTTTGGATTTTTGTTAATTTCTTGTAGTCTAAAAAGAATTGGTTAAGTTATGAAATATCGATAGCAAGATATACTCTTTGGCTCAGCTTTTATCTTAATTCTGAAACTTTTCTCTAAAAATGACTTTATTTCCCGATCTTTCTATCTATAACAAATAGAT

mRNA sequence

ATGGCCCGCAACACCATCATTTCCATTCTCCTTCTCCTCCTTCTTCTCACCGTCGTCTCCCACTGTTCCAACAACGAATCCCGGCTTCTCATTGATTTCTACGTTAATGTCAAAATTTCGTTGCTTGATAGGTTGAATGTAGCAGAACTTGTGTTGCAATTAACTGCAATACTGTTGGGATTCGGTACGGAAAGTTTTGCGGAGTTGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGCCAATAACCTCTATCACATGGGTTTTTCAGGTTTAACTAATGTAAAATGTCACGAGAAGTTCAAGAGTTGTATTAAGAAAGTGCAGAAATCTGGAAAGGTTGGTTTCTCTAACGACTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGTATGAATTTGGCTATCATTAAAGCTTCCACTATATATAATATCAGTTGGGGCTCAAGAAAGCGGCAGACGGAACCGGCGTCCTCTCTTCTGCTTCACCATCTCCCTCCATTCGTTGCACCGCAGATGGCGAACGTTCCGGGGCAGTTGGTATGGGAAATCGTTAAGAAGAACAGCTCTTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCCAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCTGGGTTGGCAAATCGTAAGACGGTGACCATTCAGCCTGGAGGCAAAGATTTGTCAGTATTGCTCGCCACGTCAAAGACGAAGAAACAGAACAAACCAGCAAATTCGCTTCACAAATCCGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCTGTGATTAATCAGGTCGCTGACAACTACTACCGCCCAGACTTGAAGAATGCTGCCCTTGCTAAGCTAAGCGCAGTGCACAGGAGCCTCAAGGTCGCCAAATCAGGTGTGAAGAAGAGGAACAGACAGAGTGTTACCCGCGGTAGGAAGTGA

Coding sequence (CDS)

ATGGCCCGCAACACCATCATTTCCATTCTCCTTCTCCTCCTTCTTCTCACCGTCGTCTCCCACTGTTCCAACAACGAATCCCGGCTTCTCATTGATTTCTACGTTAATGTCAAAATTTCGTTGCTTGATAGGTTGAATGTAGCAGAACTTGTGTTGCAATTAACTGCAATACTGTTGGGATTCGGTACGGAAAGTTTTGCGGAGTTGGATGGACGGGTTGTGCTGGTGAAAAGCCTTGCGATGATCTTGATGCCTGTTGCAAAGTTCATGACGAATGTGTTGAAAGAAAAGGCCAATAACCTCTATCACATGGGTTTTTCAGGTTTAACTAATGTAAAATGTCACGAGAAGTTCAAGAGTTGTATTAAGAAAGTGCAGAAATCTGGAAAGGTTGGTTTCTCTAACGACTGCCCTTATTCCACAGCTGTTCCTACAATGGTGCAGGGTATGAATTTGGCTATCATTAAAGCTTCCACTATATATAATATCAGTTGGGGCTCAAGAAAGCGGCAGACGGAACCGGCGTCCTCTCTTCTGCTTCACCATCTCCCTCCATTCGTTGCACCGCAGATGGCGAACGTTCCGGGGCAGTTGGTATGGGAAATCGTTAAGAAGAACAGCTCTTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCCAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCTGGGTTGGCAAATCGTAAGACGGTGACCATTCAGCCTGGAGGCAAAGATTTGTCAGTATTGCTCGCCACGTCAAAGACGAAGAAACAGAACAAACCAGCAAATTCGCTTCACAAATCCGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCTGTGATTAATCAGGTCGCTGACAACTACTACCGCCCAGACTTGAAGAATGCTGCCCTTGCTAAGCTAAGCGCAGTGCACAGGAGCCTCAAGGTCGCCAAATCAGGTGTGAAGAAGAGGAACAGACAGAGTGTTACCCGCGGTAGGAAGTGA
Homology
[Close]
BLAST of CSPI02G00550 vs. Swiss-Prot
Match: RL281_ARATH (60S ribosomal protein L28-1 OS=Arabidopsis thaliana GN=RPL28A PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-52
Identity = 103/143 (72.03%), Postives = 125/143 (87.41%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVK N+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
              KD +V+LAT+KTKKQNKP  S++KS+++KEFPRM+KAV NQV DNYYRPDLK AALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSA+ + L+VAKSG K+RNRQ+
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. Swiss-Prot
Match: RL282_ARATH (60S ribosomal protein L28-2 OS=Arabidopsis thaliana GN=RPL28C PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-52
Identity = 102/143 (71.33%), Postives = 123/143 (86.01%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVK+N+ FLVK+FGRGNA VQFSKE NNL N+NSYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
             GKD  V+L T+KTK+QNKP  S++KS+++KEF RM+K V NQV DNYYRPDLK AALA
Sbjct: 61  AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSA+ + L+VAKSG K+RNRQ+
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. Swiss-Prot
Match: RL28_BOVIN (60S ribosomal protein L28 OS=Bos taurus GN=RPL28 PE=2 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-12
Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 198 LVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLS 257
           L W +V+  SSFL+K   +      +S EPNNL   NS++++GL +RKTV ++P      
Sbjct: 5   LQWMVVRNCSSFLIKRNKQ-----TYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 64

Query: 258 VLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHR 317
           V++   +   Q KPA S  ++ + K       ++ + +  N YRPDL+ AA+ + SA+ R
Sbjct: 65  VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 122

Query: 318 SLK 321
           S K
Sbjct: 125 SQK 122

[Close]
BLAST of CSPI02G00550 vs. Swiss-Prot
Match: RL28_MOUSE (60S ribosomal protein L28 OS=Mus musculus GN=Rpl28 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-12
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 1 

Query: 198 LVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLS 257
           L W +V+  SSFL+K   +      +S EPNNL   NS++++GL +RKTV ++P      
Sbjct: 5   LQWMVVRNCSSFLIKRNKQ-----TYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 64

Query: 258 VLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHR 317
           V++   +   Q KPA S  ++ + K       ++ + +  N YRPDL+ AA+ + SA+ R
Sbjct: 65  VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 124

Query: 318 SLKVAKSGVKKRNRQSVTR 337
           S K     V KR R   T+
Sbjct: 125 SQKPV---VVKRKRTRPTK 135

[Close]
BLAST of CSPI02G00550 vs. Swiss-Prot
Match: RL28_HUMAN (60S ribosomal protein L28 OS=Homo sapiens GN=RPL28 PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 3.7e-12
Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 1 

Query: 198 LVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLS 257
           L W +V+  SSFL+K   +      +S EPNNL   NS++++GL +RKTV ++P      
Sbjct: 5   LQWMVVRNCSSFLIKRNKQ-----TYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 64

Query: 258 VLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHR 317
           V++   +   Q KPA S  ++ + K       ++ + +  N YRPDL+ AA+ + SA+ R
Sbjct: 65  VVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 124

Query: 318 SLKVAKSGVKKRNRQSVTR 337
           S K     + KR R   T+
Sbjct: 125 SQKPV---MVKRKRTRPTK 135

[Close]
BLAST of CSPI02G00550 vs. TrEMBL
Match: A0A0A0LHT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000570 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.4e-95
Identity = 184/190 (96.84%), Postives = 185/190 (97.37%), Query Frame = 1 

Query: 150 MNLAIIKASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF 209
           +N     ASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF
Sbjct: 6   LNPHFCPASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF 65

Query: 210 LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN 269
           LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN
Sbjct: 66  LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN 125

Query: 270 KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR 329
           KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR
Sbjct: 126 KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR 185

Query: 330 NRQSVTRGRK 340
           NRQSVTRGRK
Sbjct: 186 NRQSVTRGRK 195

[Close]
BLAST of CSPI02G00550 vs. TrEMBL
Match: A0A067KCB5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07323 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.2e-63
Identity = 128/144 (88.89%), Postives = 137/144 (95.14%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+SFLVKEFGRGNASVQFSKE NNLYNLNSYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKEFGRGNASVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSV+LAT+KTKKQNKP++ LHKSVMRKEF RMAKAV NQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVVLATTKTKKQNKPSSLLHKSVMRKEFQRMAKAVSNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQSV 335
           +LSAVHRSLKVAKSGVKKR RQ+V
Sbjct: 121 RLSAVHRSLKVAKSGVKKRTRQAV 144

[Close]
BLAST of CSPI02G00550 vs. TrEMBL
Match: V4TVN3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009798mg PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.2e-63
Identity = 125/143 (87.41%), Postives = 138/143 (96.50%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+ FLVK+FGRGNASV+FSKEPNNLYNLNS+KHSGLANRKTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKQFGRGNASVEFSKEPNNLYNLNSFKHSGLANRKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSV+LAT+KTKKQNKPA+ LHKS MRKEFPRMAKAV+NQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVVLATAKTKKQNKPASLLHKSTMRKEFPRMAKAVVNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSAV+RSLKV+KSGVKKRNRQ+
Sbjct: 121 RLSAVNRSLKVSKSGVKKRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. TrEMBL
Match: A0A067EL75_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031911mg PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.2e-63
Identity = 125/143 (87.41%), Postives = 138/143 (96.50%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+ FLVK+FGRGNASV+FSKEPNNLYNLNS+KHSGLANRKTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKQFGRGNASVEFSKEPNNLYNLNSFKHSGLANRKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSV+LAT+KTKKQNKPA+ LHKS MRKEFPRMAKAV+NQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVVLATAKTKKQNKPASLLHKSTMRKEFPRMAKAVVNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSAV+RSLKV+KSGVKKRNRQ+
Sbjct: 121 RLSAVNRSLKVSKSGVKKRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. TrEMBL
Match: A0A061GM94_THECC (Ribosomal L28e protein family OS=Theobroma cacao GN=TCM_037713 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.3e-63
Identity = 132/150 (88.00%), Postives = 139/150 (92.67%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+ FLVKEFGRGNASVQFSKE NNL NLNSYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKEFGRGNASVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
            GGKD SVLLATSKTKKQNKPA+ LHKSVMRKEFPRMAKAV+NQVADNYYRPDLK AALA
Sbjct: 61  YGGKDQSVLLATSKTKKQNKPASLLHKSVMRKEFPRMAKAVVNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQSVT-RGRK 340
           +LSAVHRSLKVAKSGVKKRNRQ+V   GRK
Sbjct: 121 RLSAVHRSLKVAKSGVKKRNRQAVNIPGRK 150

[Close]
BLAST of CSPI02G00550 vs. TAIR10
Match: AT2G19730.1 (AT2G19730.1 Ribosomal L28e protein family)

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-54
Identity = 103/143 (72.03%), Postives = 125/143 (87.41%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVK N+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
              KD +V+LAT+KTKKQNKP  S++KS+++KEFPRM+KAV NQV DNYYRPDLK AALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSA+ + L+VAKSG K+RNRQ+
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. TAIR10
Match: AT4G29410.1 (AT4G29410.1 Ribosomal L28e protein family)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-53
Identity = 102/143 (71.33%), Postives = 123/143 (86.01%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVK+N+ FLVK+FGRGNA VQFSKE NNL N+NSYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
             GKD  V+L T+KTK+QNKP  S++KS+++KEF RM+K V NQV DNYYRPDLK AALA
Sbjct: 61  AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSA+ + L+VAKSG K+RNRQ+
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143

[Close]
BLAST of CSPI02G00550 vs. TAIR10
Match: AT2G19690.2 (AT2G19690.2 phospholipase A2-beta)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 1 

Query: 107 SGLTNVKCHEKFKSCIKKVQKS------GKVGFSNDCPYSTAVPTMVQGMNLAIIKASTI 163
           +G+TN+ CH+KF+ C+ ++ K+       KVGFS  CPYS  +PT+ QGM++ I+ +   
Sbjct: 81  NGMTNISCHKKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGILFSQLA 140

[Close]
BLAST of CSPI02G00550 vs. TAIR10
Match: AT4G29470.1 (AT4G29470.1 Phospholipase A2 family protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-08
Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 1 

Query: 108 GLTNVKCHEKFKSCIKKVQKS------GKVGFSNDCPYSTAVPTMVQGMNLAI 155
           G+T V CH++F+ C+ ++++S       KVGFS +CPYST +PT+ +GMN  I
Sbjct: 80  GMTYVDCHKQFQRCVNELKQSIQESNNQKVGFSKECPYSTVIPTVYRGMNYGI 132

[Close]
BLAST of CSPI02G00550 vs. TAIR10
Match: AT4G29460.1 (AT4G29460.1 Phospholipase A2 family protein)

HSP 1 Score: 55.5 bits (132), Expect = 7.6e-08
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 1 

Query: 108 GLTNVKCHEKFKSCIKKVQKS------GKVGFSNDCPYSTAVPTMVQGMNLAI 155
           G+T V CH++FK C+ K+ KS       K+GFS  CPYS  +PT+  GM+  I
Sbjct: 80  GMTYVNCHKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSIVIPTVFNGMDYGI 132

[Close]
BLAST of CSPI02G00550 vs. NCBI nr
Match: gi|700205430|gb|KGN60549.1| (hypothetical protein Csa_2G000570 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 3.5e-95
Identity = 184/190 (96.84%), Postives = 185/190 (97.37%), Query Frame = 1 

Query: 150 MNLAIIKASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF 209
           +N     ASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF
Sbjct: 6   LNPHFCPASTIYNISWGSRKRQTEPASSLLLHHLPPFVAPQMANVPGQLVWEIVKKNSSF 65

Query: 210 LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN 269
           LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN
Sbjct: 66  LVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGGKDLSVLLATSKTKKQN 125

Query: 270 KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR 329
           KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR
Sbjct: 126 KPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALAKLSAVHRSLKVAKSGVKKR 185

Query: 330 NRQSVTRGRK 340
           NRQSVTRGRK
Sbjct: 186 NRQSVTRGRK 195

[Close]
BLAST of CSPI02G00550 vs. NCBI nr
Match: gi|449446572|ref|XP_004141045.1| (PREDICTED: 60S ribosomal protein L28-1-like [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 4.4e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA
Sbjct: 61  PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQSVTRGRK 340
           KLSAVHRSLKVAKSGVKKRNRQSVTRGRK
Sbjct: 121 KLSAVHRSLKVAKSGVKKRNRQSVTRGRK 149

[Close]
BLAST of CSPI02G00550 vs. NCBI nr
Match: gi|659071325|ref|XP_008459233.1| (PREDICTED: 60S ribosomal protein L28-1-like [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 144/150 (96.00%), Postives = 146/150 (97.33%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLY+LNSYKHSGLAN KTVTIQ
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYSLNSYKHSGLANLKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAV NQVADNYYRPDLKNAALA
Sbjct: 61  PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKNAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQSV-TRGRK 340
           KLSAVHRSLKVAKSGVKK NRQ+V TRGRK
Sbjct: 121 KLSAVHRSLKVAKSGVKKGNRQAVRTRGRK 150

[Close]
BLAST of CSPI02G00550 vs. NCBI nr
Match: gi|802627722|ref|XP_012076803.1| (PREDICTED: 60S ribosomal protein L28-2 [Jatropha curcas])

HSP 1 Score: 250.0 bits (637), Expect = 6.0e-63
Identity = 128/144 (88.89%), Postives = 137/144 (95.14%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+SFLVKEFGRGNASVQFSKE NNLYNLNSYKHSGLAN+KTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKEFGRGNASVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSV+LAT+KTKKQNKP++ LHKSVMRKEF RMAKAV NQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVVLATTKTKKQNKPSSLLHKSVMRKEFQRMAKAVSNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQSV 335
           +LSAVHRSLKVAKSGVKKR RQ+V
Sbjct: 121 RLSAVHRSLKVAKSGVKKRTRQAV 144

[Close]
BLAST of CSPI02G00550 vs. NCBI nr
Match: gi|567918744|ref|XP_006451378.1| (hypothetical protein CICLE_v10009798mg [Citrus clementina])

HSP 1 Score: 250.0 bits (637), Expect = 6.0e-63
Identity = 125/143 (87.41%), Postives = 138/143 (96.50%), Query Frame = 1 

Query: 191 MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 250
           MA VPGQL+WEIVKKN+ FLVK+FGRGNASV+FSKEPNNLYNLNS+KHSGLANRKTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNCFLVKQFGRGNASVEFSKEPNNLYNLNSFKHSGLANRKTVTIQ 60

Query: 251 PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVINQVADNYYRPDLKNAALA 310
           PGGKDLSV+LAT+KTKKQNKPA+ LHKS MRKEFPRMAKAV+NQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVVLATAKTKKQNKPASLLHKSTMRKEFPRMAKAVVNQVADNYYRPDLKKAALA 120

Query: 311 KLSAVHRSLKVAKSGVKKRNRQS 334
           +LSAV+RSLKV+KSGVKKRNRQ+
Sbjct: 121 RLSAVNRSLKVSKSGVKKRNRQA 143

The following BLAST results are available for this feature:
BLAST of CSPI02G00550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL281_ARATH1.3e-5272.0360S ribosomal protein L28-1 OS=Arabidopsis thaliana GN=RPL28A PE=2 SV=1[more]
RL282_ARATH2.1e-5271.3360S ribosomal protein L28-2 OS=Arabidopsis thaliana GN=RPL28C PE=2 SV=1[more]
RL28_BOVIN1.7e-1234.9660S ribosomal protein L28 OS=Bos taurus GN=RPL28 PE=2 SV=3[more]
RL28_MOUSE1.7e-1234.5360S ribosomal protein L28 OS=Mus musculus GN=Rpl28 PE=1 SV=2[more]
RL28_HUMAN3.7e-1233.8160S ribosomal protein L28 OS=Homo sapiens GN=RPL28 PE=1 SV=3[more]
BLAST of CSPI02G00550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHT1_CUCSA2.4e-9596.84Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000570 PE=4 SV=1[more]
A0A067KCB5_JATCU4.2e-6388.89Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07323 PE=4 SV=1[more]
V4TVN3_9ROSI4.2e-6387.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009798mg PE=4 SV=1[more]
A0A067EL75_CITSI4.2e-6387.41Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031911mg PE=4 SV=1[more]
A0A061GM94_THECC9.3e-6388.00Ribosomal L28e protein family OS=Theobroma cacao GN=TCM_037713 PE=4 SV=1[more]
BLAST of CSPI02G00550 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19730.17.1e-5472.03 Ribosomal L28e protein family[more]
AT4G29410.11.2e-5371.33 Ribosomal L28e protein family[more]
AT2G19690.21.4e-0940.32 phospholipase A2-beta[more]
AT4G29470.13.4e-0845.28 Phospholipase A2 family protein[more]
AT4G29460.17.6e-0845.28 Phospholipase A2 family protein[more]
BLAST of CSPI02G00550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205430|gb|KGN60549.1|3.5e-9596.84hypothetical protein Csa_2G000570 [Cucumis sativus][more]
gi|449446572|ref|XP_004141045.1|4.4e-74100.00PREDICTED: 60S ribosomal protein L28-1-like [Cucumis sativus][more]
gi|659071325|ref|XP_008459233.1|1.5e-6996.00PREDICTED: 60S ribosomal protein L28-1-like [Cucumis melo][more]
gi|802627722|ref|XP_012076803.1|6.0e-6388.89PREDICTED: 60S ribosomal protein L28-2 [Jatropha curcas][more]
gi|567918744|ref|XP_006451378.1|6.0e-6387.41hypothetical protein CICLE_v10009798mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002672Ribosomal_L28e
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006348 chromatin silencing at telomere
biological_process GO:0043967 histone H4 acetylation
biological_process GO:0050482 arachidonic acid secretion
biological_process GO:0009395 phospholipid catabolic process
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0000781 chromosome, telomeric region
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0010485 H4 histone acetyltransferase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004623 phospholipase A2 activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G00550.1CSPI02G00550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 160..332
score: 1.0
NoneNo IPR availablePANTHERPTHR10544:SF1SUBFAMILY NOT NAMEDcoord: 160..332
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G00550Cla016823Watermelon (97103) v1cpiwmB165
CSPI02G00550Cla012625Watermelon (97103) v1cpiwmB123
CSPI02G00550Csa2G000560Cucumber (Chinese Long) v2cpicuB065
CSPI02G00550MELO3C013029Melon (DHL92) v3.5.1cpimeB131
CSPI02G00550MELO3C004616Melon (DHL92) v3.5.1cpimeB140
CSPI02G00550ClCG07G013610Watermelon (Charleston Gray)cpiwcgB165
CSPI02G00550Lsi11G001980Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G00550Lsi07G005570Bottle gourd (USVL1VR-Ls)cpilsiB138
CSPI02G00550CsaV3_2G001580Cucumber (Chinese Long) v3cpicucB080
CSPI02G00550Cla97C07G140420Watermelon (97103) v2cpiwmbB159
CSPI02G00550Cla97C11G208250Watermelon (97103) v2cpiwmbB105
CSPI02G00550Bhi01G002582Wax gourdcpiwgoB144
CSPI02G00550Bhi06G001427Wax gourdcpiwgoB130
CSPI02G00550Cucsa.116910Cucumber (Gy14) v1cgycpiB152
CSPI02G00550CmaCh12G012890Cucurbita maxima (Rimu)cmacpiB174
CSPI02G00550CmoCh12G013250Cucurbita moschata (Rifu)cmocpiB159
CSPI02G00550Cp4.1LG07g10500Cucurbita pepo (Zucchini)cpecpiB822
CSPI02G00550Cp4.1LG02g14430Cucurbita pepo (Zucchini)cpecpiB545
CSPI02G00550Cp4.1LG11g11690Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G00550CsGy2G000520Cucumber (Gy14) v2cgybcpiB056
CSPI02G00550Carg10813Silver-seed gourdcarcpiB0603
CSPI02G00550Carg04296Silver-seed gourdcarcpiB0224
CSPI02G00550Carg18616Silver-seed gourdcarcpiB0934
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G00550Cucurbita pepo (Zucchini)cpecpiB370
CSPI02G00550Cucurbita pepo (Zucchini)cpecpiB665
CSPI02G00550Cucurbita pepo (Zucchini)cpecpiB818
CSPI02G00550Bottle gourd (USVL1VR-Ls)cpilsiB133
CSPI02G00550Melon (DHL92) v3.6.1cpimedB106
CSPI02G00550Melon (DHL92) v3.6.1cpimedB133
CSPI02G00550Cucumber (Gy14) v2cgybcpiB017
CSPI02G00550Silver-seed gourdcarcpiB0044
CSPI02G00550Silver-seed gourdcarcpiB0107
CSPI02G00550Silver-seed gourdcarcpiB0931
CSPI02G00550Cucumber (Chinese Long) v3cpicucB075
CSPI02G00550Watermelon (97103) v2cpiwmbB132
CSPI02G00550Wax gourdcpiwgoB211
CSPI02G00550Wild cucumber (PI 183967)cpicpiB010
CSPI02G00550Cucumber (Gy14) v1cgycpiB438
CSPI02G00550Cucurbita maxima (Rimu)cmacpiB073
CSPI02G00550Cucurbita maxima (Rimu)cmacpiB116
CSPI02G00550Cucurbita maxima (Rimu)cmacpiB170
CSPI02G00550Cucurbita maxima (Rimu)cmacpiB800
CSPI02G00550Cucurbita moschata (Rifu)cmocpiB066
CSPI02G00550Cucurbita moschata (Rifu)cmocpiB108
CSPI02G00550Cucurbita moschata (Rifu)cmocpiB156
CSPI02G00550Cucurbita moschata (Rifu)cmocpiB787
CSPI02G00550Cucumber (Chinese Long) v2cpicuB061
CSPI02G00550Melon (DHL92) v3.5.1cpimeB111
CSPI02G00550Watermelon (Charleston Gray)cpiwcgB102
CSPI02G00550Watermelon (Charleston Gray)cpiwcgB140
CSPI02G00550Watermelon (97103) v1cpiwmB119