Lsi10G014960 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G014960
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	CBS domain-containing protein
Location	chr10 : 19160079 .. 19163042 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATTGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTTGGTGCACCACAGAAGACACAGTCTATGATGCTGTTCAGTCGGTATGCTTCCTTTTGAGAGTTTTTTCCTTTGAACAGTTTTATATCTTTTCTTTATTTTAATGAGAATTTCATTTCTTGTTAAGAAAATTGTTTCTTCTGCTATTCATACTTACACACTCCCCCTTATTAAATAATGAAAAAAAAAAAGATGACTCAGCACAATGTTGGAGCCTTGGTGGTCGTTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGGTACGTGAATCGATATGCTTTCTGAATGCAGATATTTTCTCTGATTATATGGGTTCAACTAAAAAATCTATGGTTCTATCCTAATTTAGATTGAAGAGGTTCATTTATATCGTAGTCTGGGACAAATAACACATGTATGTACTCTTGGAAATCTTTTTTTTTTTTTTTTTTTTAAATTTGATAATAAACAAATTTCATTGAGGAATGAAATTTACAAGGTGAGCGAGCCCCAACCAAAGGAGATAGTTACAAAAGATTTCTCCAATTGGTCAAAGGAGAGGAGAGGTTATAAGAGCTATAGAAAGATATACATTTGGATCAAGACATAGCAAGATAGATAATATGTTCCAACGCTCTCTAATTGGCTAATTGTGCCAAATATTGGACTTCAAACTCAAAAATTCAAACTTCTGATCACTTTCTTTGTGCATTGCTATTCTTCTCAAGAAACCTACATACTTTTATTGGTTTTCCGATAGAGATTTCAAAGTGAACTGGAATTTTTTTATGTTATTATTATTATTTTTTTCTTTATGGGGGAGTAAATTTGCATTATTTTCATACTTTTGGCATGACCCAAAAATGGTTTCTACTCGTTATTTTCATACTTCGTGGCTTTTCCTCTTTGGTCATTTCTCCTCATGCCTTGCAAACAAAAAATACTTAGGTGTAACTAAGACTACACCCATCTTTGAGTAGTCTACCAAATTCTTTAATCATAGTTTGCAACGTGGCAAATTCATCTTAATGCTTTCTGAAGGTTTTTTTTTATTATATATTTTTTTTATTGTGTAATGAGCATGGTATGCACTCAAGTATTGATGCATTTCCCTGCTCCTTTACTTGTACTATGACCGTGGAATGTTATTTCTAAGTTTTAGGTCCAACGAAGGCATCTTCTTGTCTTGTGGAATACAATACCTGAATTCTGAGCCTTTCTTTTCGCACATTTCTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTCGGGGATATCATGACTGAGGAGGTATAAACCTGTCACCTTTACATCTCATCCAGCCTTAAATTTCTACTTGTTGCGTGTGGGATGATGGAAATTAGATGGTCATATGGTTTTTTAAAAAATTATTTTTATTTCCATTTTTTTAAAATCAACTACCTTAGTTTGCATATGTATATATGTATTTATGTGCATACGGGTTGCTATTACTCGTTTAATCTTGCCTCCATCTACATCATAGCCACACAAAACATTGGAACATCGAATTGCAATGACAAATTGCTTTGATTTGTGTTTGCAGAACAAACTTATCACCGTGACACCTGACACCAAGGTTTTGCGAGCTATGCAACTTATGACTGGTATTACAATACATTTTAAGTTAAATTATTAAAAAACACCCTTGAGTTTTGTCATTTGTTTTAGAAATACTCTTATACTTTTTAAAGTTGGAATATTATCCTTAGCATTTCATGAACATTTCAAAACTACCTCCAGAGTGGGATGAAAATCGATACATAGGATACATAGAATAGTGGCAGACTGGCAGTGACCTAGAACAAAAATTTGGATTGCTACACTGTTTTAAATCACTGTCACACCACTCAATGTTCAAATTTCTGTCACTCTAGGGATAGTTTTGAAATGTTTATGGAAGGTCAAAAAGTAATATTGCAACTTTTAAAAGAAAAAACTCGGAAGCCTTTTTTTTTATTTTTTTTTAATTTTTTTTTTAATTATAGTTCAGTCTGCAATATATATTTTCATTACTGCACCATTTTTCTAATATAACCTGGAAATCTCATGCTGGTGGACAGATAATCGAATTAGGCACATACCTGTCATCGACGACAAGGGCATGAAAGGCATGGTGTCAATTGGGGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGAGTTGCTGCTCTTGACTTTGGTTGCTTGGTGTATGATGTTTCAAAAAACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATGCGCACTCTCTTATTAATATGGTTGTGCTTCCTGTTGTTTCTAGTATAATAACAGACCGATGTTGTAATAATAGACGGTAACTTTGCTTTGGAAAATTTCACCTGAATTTGCATTGTGGTTGATGGAGATGACTAAAATCTCCCTCCAGTTGGTGATTTACCAAAAATGAAGCAGAGAATTTCTGTTTAAATTGAGTTCGAGGAATCTCTTTGGATTTAACTTCAGGATTCTCTACCTTTTTATTACATTAATTTATACATAGGAAGTATTAAAATTTTCATTTATTTAGTATGATCTATTAGACAATTTGAATTTTGTATTTAAAAGAGTTTTGAACTTGACTAGCTTATGAATTTGGAAAAAAAATATTGAATAAAATCTAAGGGTCCGTTTGGATTGAATTTTTAAGTGTTTATAA

mRNA sequence

ATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATTGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAATAATCGAATTAGGCACATACCTGTCATCGACGACAAGGGCATGAAAGGCATGGTGTCAATTGGGGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGAGTTGCTGCTCTTGACTTTGGTTGCTTGGTGTATGATGTTTCAAAAAACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATGCGCACTCTCTTATTAATATGGTTGTGCTTCCTGTTGTTTCTAGTATAATAACAGACCGATGTTGTAATAATAGACGGTAACTTTGCTTTGGAAAATTTCACCTGAATTTGCATTGTGGTTGATGGAGATGACTAAAATCTCCCTCCAGTTGGTGATTTACCAAAAATGAAGCAGAGAATTTCTGTTTAAATTGAGTTCGAGGAATCTCTTTGGATTTAACTTCAGGATTCTCTACCTTTTTATTACATTAATTTATACATAGGAAGTATTAAAATTTTCATTTATTTAGTATGATCTATTAGACAATTTGAATTTTGTATTTAAAAGAGTTTTGAACTTGACTAGCTTATGAATTTGGAAAAAAAATATTGAATAAAATCTAAGGGTCCGTTTGGATTGAATTTTTAAGTGTTTATAA

Coding sequence (CDS)

ATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAACATTGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAATAATCGAATTAGGCACATACCTGTCATCGACGACAAGGGCATGAAAGGCATGGTGTCAATTGGGGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGA

Protein sequence

MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGKNNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY

Homology

[Close]

BLAST of Lsi10G014960 vs. Swiss-Prot
Match: CBSX3_ARATH (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 39  STSASSVNIEEHGFESTTIDD-ILKAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVV 98
           ST    +  EE+   + T +  +L+A     +NRIRHIPVI DKGM GMVSIGDVVRAVV
Sbjct: 129 STKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVV 188

Query: 99  SEHREELDRLNAYIQGGY 114
            EHREEL RLNAYIQGGY
Sbjct: 189 HEHREELQRLNAYIQGGY 206

[Close]

BLAST of Lsi10G014960 vs. TrEMBL
Match: A0A0A0KG88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134340 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1


Query: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDI 60
          MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDI
Sbjct: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61 LKAKGKN 68
          LKAKGK+
Sbjct: 61 LKAKGKS 67

[Close]

BLAST of Lsi10G014960 vs. TrEMBL
Match: A0A103XNR7_CYNCS (Cystathionine beta-synthase, core OS=Cynara cardunculus var. scolymus GN=Ccrd_003768 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-26
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 13  NVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDD-----------IL 72
           ++VK AVLQ +R+ NP +RP  L+R   S S+  IEEHGFESTTI D           +L
Sbjct: 46  SIVKNAVLQHVRLVNPLVRP--LTRLE-STSAARIEEHGFESTTISDNKLITVTPDTKVL 105

Query: 73  KAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY 114
           KA     +NRIRHIPVIDDK M GMVSIGDVVRAVVSEHREELDRLNA+IQGGY
Sbjct: 106 KAMQLMTDNRIRHIPVIDDKEMLGMVSIGDVVRAVVSEHREELDRLNAFIQGGY 156

[Close]

BLAST of Lsi10G014960 vs. TrEMBL
Match: A0A0K9QDX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190120 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.4e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1


Query: 39  STSASSVNIEEHGFESTTIDD-ILKAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVV 98
           ST    +  EE+   + T +  +LKA     +NRIRHIPVIDDKGMKGMVSIGDVVRAVV
Sbjct: 125 STKVGDIMTEENKLITVTPETKVLKAMQLMTDNRIRHIPVIDDKGMKGMVSIGDVVRAVV 184

Query: 99  SEHREELDRLNAYIQGGY 114
           SEHR+ELDRLNA+IQGGY
Sbjct: 185 SEHRDELDRLNAFIQGGY 202

[Close]

BLAST of Lsi10G014960 vs. TrEMBL
Match: A0A067DWN7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028667mg PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.8e-17
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDI 60
          MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF  S SS  +EEHGFESTTI DI
Sbjct: 1  MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 60

Query: 61 LKAKGK 67
          LKAKGK
Sbjct: 61 LKAKGK 65

[Close]

BLAST of Lsi10G014960 vs. TrEMBL
Match: M5W5R5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011584mg PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.8e-17
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 1


Query: 39  STSASSVNIEEHGFESTTIDD-ILKAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVV 98
           ST    +  EE+   + T D  +L+A     +NRIRHIPVIDD+GM GMVSIGDVVRAVV
Sbjct: 128 STKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDRGMIGMVSIGDVVRAVV 187

Query: 99  SEHREELDRLNAYIQGGY 114
           SEHREELDRLNAYIQGGY
Sbjct: 188 SEHREELDRLNAYIQGGY 205

[Close]

BLAST of Lsi10G014960 vs. TAIR10
Match: AT5G10860.1 (AT5G10860.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 87.0 bits (214), Expect = 7.9e-18
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 39  STSASSVNIEEHGFESTTIDD-ILKAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVV 98
           ST    +  EE+   + T +  +L+A     +NRIRHIPVI DKGM GMVSIGDVVRAVV
Sbjct: 129 STKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVV 188

Query: 99  SEHREELDRLNAYIQGGY 114
            EHREEL RLNAYIQGGY
Sbjct: 189 HEHREELQRLNAYIQGGY 206

[Close]

BLAST of Lsi10G014960 vs. TAIR10
Match: AT1G47271.1 (AT1G47271.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.2e-07
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 1


Query: 68  NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY 114
           N IRH+PVID K + G++S+ DVV+A+V     EL RLN +I+G Y
Sbjct: 148 NHIRHVPVIDGK-IVGLISMVDVVKAIVDHQNGELKRLNEFIKGDY 192

[Close]

BLAST of Lsi10G014960 vs. NCBI nr
Match: gi|778712976|ref|XP_004139921.2| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1


Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDI
Sbjct: 64  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 123

Query: 61  LKAKGKN 68
           LKAKGK+
Sbjct: 124 LKAKGKS 130

[Close]

BLAST of Lsi10G014960 vs. NCBI nr
Match: gi|700191572|gb|KGN46776.1| (hypothetical protein Csa_6G134340 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1


Query: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDI 60
          MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDI
Sbjct: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61 LKAKGKN 68
          LKAKGK+
Sbjct: 61 LKAKGKS 67

[Close]

BLAST of Lsi10G014960 vs. NCBI nr
Match: gi|659112534|ref|XP_008456267.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1


Query: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDI 60
          MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDI
Sbjct: 1  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61 LKAKGKN 68
          LKAKGK+
Sbjct: 61 LKAKGKS 67

[Close]

BLAST of Lsi10G014960 vs. NCBI nr
Match: gi|976906772|gb|KVH94176.1| (Cystathionine beta-synthase, core [Cynara cardunculus var. scolymus])

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-26
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 13  NVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDD-----------IL 72
           ++VK AVLQ +R+ NP +RP  L+R   S S+  IEEHGFESTTI D           +L
Sbjct: 46  SIVKNAVLQHVRLVNPLVRP--LTRLE-STSAARIEEHGFESTTISDNKLITVTPDTKVL 105

Query: 73  KAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY 114
           KA     +NRIRHIPVIDDK M GMVSIGDVVRAVVSEHREELDRLNA+IQGGY
Sbjct: 106 KAMQLMTDNRIRHIPVIDDKEMLGMVSIGDVVRAVVSEHREELDRLNAFIQGGY 156

[Close]

BLAST of Lsi10G014960 vs. NCBI nr
Match: gi|902150880|gb|KNA05465.1| (hypothetical protein SOVF_190120 [Spinacia oleracea])

HSP 1 Score: 95.5 bits (236), Expect = 6.3e-17
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1


Query: 39  STSASSVNIEEHGFESTTIDD-ILKAKG--KNNRIRHIPVIDDKGMKGMVSIGDVVRAVV 98
           ST    +  EE+   + T +  +LKA     +NRIRHIPVIDDKGMKGMVSIGDVVRAVV
Sbjct: 125 STKVGDIMTEENKLITVTPETKVLKAMQLMTDNRIRHIPVIDDKGMKGMVSIGDVVRAVV 184

Query: 99  SEHREELDRLNAYIQGGY 114
           SEHR+ELDRLNA+IQGGY
Sbjct: 185 SEHRDELDRLNAFIQGGY 202

The following BLAST results are available for this feature:

BLAST of Lsi10G014960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CBSX3_ARATH	1.4e-16	62.82	CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CB...	[more]

BLAST of Lsi10G014960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG88_CUCSA	4.7e-27	97.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134340 PE=4 SV=1	[more]
A0A103XNR7_CYNCS	4.0e-26	64.04	Cystathionine beta-synthase, core OS=Cynara cardunculus var. scolymus GN=Ccrd_00...	[more]
A0A0K9QDX2_SPIOL	4.4e-17	66.67	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190120 PE=4 SV=1	[more]
A0A067DWN7_CITSI	9.8e-17	71.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028667mg PE=4 SV=1	[more]
M5W5R5_PRUPE	9.8e-17	66.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011584mg PE=4 SV=1	[more]

BLAST of Lsi10G014960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10860.1	7.9e-18	62.82	Cystathionine beta-synthase (CBS) family protein	[more]
AT1G47271.1	8.2e-07	52.17	Cystathionine beta-synthase (CBS) family protein	[more]

BLAST of Lsi10G014960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778712976\|ref\|XP_004139921.2\|	6.7e-27	97.01	PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus]	[more]
gi\|700191572\|gb\|KGN46776.1\|	6.7e-27	97.01	hypothetical protein Csa_6G134340 [Cucumis sativus]	[more]
gi\|659112534\|ref\|XP_008456267.1\|	6.7e-27	97.01	PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo]	[more]
gi\|976906772\|gb\|KVH94176.1\|	5.7e-26	64.04	Cystathionine beta-synthase, core [Cynara cardunculus var. scolymus]	[more]
gi\|902150880\|gb\|KNA05465.1\|	6.3e-17	66.67	hypothetical protein SOVF_190120 [Spinacia oleracea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000644	CBS_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0050897	cobalt ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G014960.1	Lsi10G014960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 53..95 score: 8.
IPR000644	CBS domain	PROFILE	PS51371	CBS	coord: 38..101 score: 9
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 66..96 score: 1.
None	No IPR available	PANTHER	PTHR11911	INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED	coord: 68..113 score: 9.4
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 66..110 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G014960	Csa6G134340	Cucumber (Chinese Long) v2	culsiB407
Lsi10G014960	CSPI06G10840	Wild cucumber (PI 183967)	cpilsiB409
Lsi10G014960	Cucsa.118770	Cucumber (Gy14) v1	cgylsiB176
Lsi10G014960	CmaCh20G002940	Cucurbita maxima (Rimu)	cmalsiB506
Lsi10G014960	CmaCh02G006880	Cucurbita maxima (Rimu)	cmalsiB545
Lsi10G014960	CmoCh02G006800	Cucurbita moschata (Rifu)	cmolsiB532
Lsi10G014960	CmoCh20G003200	Cucurbita moschata (Rifu)	cmolsiB490
Lsi10G014960	Cla013432	Watermelon (97103) v1	lsiwmB078
Lsi10G014960	MELO3C019601	Melon (DHL92) v3.5.1	lsimeB043
Lsi10G014960	ClCG02G018900	Watermelon (Charleston Gray)	lsiwcgB054
Lsi10G014960	MELO3C019601.2	Melon (DHL92) v3.6.1	lsimedB057
Lsi10G014960	Cla97C02G044830	Watermelon (97103) v2	lsiwmbB052
Lsi10G014960	Bhi10G000709	Wax gourd	lsiwgoB068
Lsi10G014960	Cp4.1LG05g10120	Cucurbita pepo (Zucchini)	cpelsiB588
Lsi10G014960	Cp4.1LG16g06890	Cucurbita pepo (Zucchini)	cpelsiB219
Lsi10G014960	CsGy6G010950	Cucumber (Gy14) v2	cgyblsiB372
Lsi10G014960	Carg03409	Silver-seed gourd	carlsiB303
Lsi10G014960	Carg11753	Silver-seed gourd	carlsiB964
Lsi10G014960	CsaV3_6G013290	Cucumber (Chinese Long) v3	cuclsiB430

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G014960	Silver-seed gourd	carlsiB966
Lsi10G014960	Cucurbita maxima (Rimu)	cmalsiB547