CmoCh02G006800 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G006800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCBS domain-containing protein
LocationCmo_Chr02 : 4317149 .. 4322082 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGCGGTGAAGAGGTCCGAAAAACAAAAAGAAAAGAGAGATAAAATCGGGTCTCACAGTTTTATGACCTTCGCCTTCCGTTAGGTTTCATTATCCGAACCTCACACTTCGCCATTACTCTTTTCTTCTCAACTTCCTTGAAACCGGAGATTTTCTTGTGGATCTTCTTCATCAGGTATCTCTCTCTCTCTGTTTTTTTTTTGTTTGTTTTTGCCATTTCATCCTCATTTTGTTATCTATCGCATGAATCTTATCGTTTTTCTGCGATCAAGGTTGAACTCTGGTGTTTGGATTTGTTTTCGTTTCATCGTCTCTTGCTTGTAGTCACTTTCGATTTGTCCCTCGCTCTTTGTTTTAATGTGTTCGTGAATCACTGCTCTGCTGATTGATTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGTTATTTTGTATTTTGTCTGTTTCGTGTACTGATCTCGGATTTAGTGAGCTGGATCATGTTTGGTATTCCAGACGTTTAATTGGAGCTATTTTTTCATTGATTACATTAATTAATAGACCTGTGCTGGTTTTGACCGACGCCGGAGGATTCAAGAAGTGCTCCACTGAGTGTGTAATTAATTGATTTTCTTCATCTTGTATTCCCGTTCACATTCTTCCACACTAGGTCTTCTTATTTATGGAGTATTTTAATACGGATGAGCCGAGCCAATTTAATTTTATTGCTAAATCTGGCATTTAACTCGGAGAAAAGAGGAAAAATAGAATAGCTATCTCAGTTTCCAATGAAAGAAATGGCGGACATAGATCGTGCTTCTATTATCAAGCTTTTTGCAGGATGTTTTTTTTTCTTCTTTTTTCTTCTTGCTATGTGGATTTCTACATGTAAAATTTTTGTAACGAAAGTTTAAAATTATCATTTTCTTGAGTACGGGTGGATTTGTATTGGACTGCTGTCTTCTGATAAAATGGCACGCTCTTCAAGCTTTAGAGAGTTTATTGTACAATGTTAAGCGTCTGTTTCTACAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGGTATGCATCTCTGCACTGTTTGAAAGTTCTCATAATCTTTATAATTGTTTACTTCTGCTGCTATTTCTACTTACGCACTCCCCCTTTTTGAATAAAAAAGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGGTACGTGATATGATTTGCTTTATAAATGCAGATATTTCTCTGAATAAATGGGTTCAACTACAAAATTATGGTCCTATCCAATTATGAATGAAGAGATTCATTTACACTGTAGTTTGGGGAAAATAACAAATGCATGTACCCTTGATAACCACTTTTCTTTTTTGAATGCCAATATGTGTGGTGTGGTTGAGAATTTGAACCTTTAACATTTTTGTCGAAGAATATGTCTTAACTAGTTGAGTTATGCCTAGGTTGACTACTTTGTAAATTTTTGAAGTTCCCAATATTTTGCAATCGGCTAATTGTGCCAAATATTGGACTTCAAACTCGGGAAGTTCAAACTGCTGATCAGTTTCTTTTCGCGTTGCTAGTCTTTTCAAGAAACCTATCTAATGTTTTCTTGGAGGTGGAGAGTAAATTTGCATTACTTCTGCAGTTTTGGAGTACCCAAAATGGTTTCTGCTGAAGATTGTGCCGTGTAGACTAGAACCCTGTAATTTAAGATTAGCTGGCTTTACCTCTTAATTTTTGGATGAGACTGCCACAACGTAAGAATCGGTTTTGCGCCATTGTATGAATGAGAAAGAAATTGCATAAGTATTTTGAGCTTATATCTAGTGATTATTCAAGGTATTATAGATTTGAATCCACATCTAACCGTAATTAAAAGGTCACCACATTGTGGCATCTTCATTTAATAATTTTTCATTTATTTGTCATTTTCCCCCTTGCCTACAATTAGTTTTCCATGTACTATAACAATAGGGTGTTATTTCTAAGCTCTAGGTCCCATAAAGCATCTTCTCATCTTTTGGAATGCAATATCTCAACTTCAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGGTATAGTTCTGTCACCTTTTATGTTTATGTCAACCAGTCTGGTTTCTTCTTTACCTCCTGTTTAAAGATAATCGTTCTTTCTAGAGTTGCAATATTACCGTTAACTCTTCATAAATGACCTGAAATGATCTGACATGATTAGGATGTTTGCTTAGATTAAGTTTGAAACAATAACATTGAGTTGCATTGATTTTTTGCTCAACATTCTATCAATTTTTTTACTCCAAAGTTAGTTTTGAAACATTTATGAAAGATTAAGGTTAATGGTAATATTGCAAAATTTTGAAAGGAGTATTTTTTAAACTAGGGACAAAGTTTAAGGGTATTTAGTTTCATCACTATGATGACCATCCATGGATTCACCTATTTAGATTTAAGATTGAAAGAATGACACCCAGTCACTTAGATTTTTTATTCAACGTTTTAACAAATTTTTTACTCTAATGGTAGATTTGAAACATTTACAAAAGTTGAAGGTAGTTTCACAACATTTGAAAGAATAGGGGTACAAGTAACAAAGTTCATGGGTCGTTTTTATAATTTAGTTTTTGTTTCCTAGAAAAATCAACTACCTTTATTTGCATAGGTATATATGGATGTACTTTATTTTTATTTTTTTTATTTTTATTTTATGAATAAACAAATCACTTGATGTTGCTTTGATTTGCACACGTGCCTCGATTATTTGTTTAATCTACCCTCCATCTACATAATAGCCACACAAAATATTAGAACTTCGAACAGCAATGACAAATTCCTTTAATTTGTGTTTGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGGTATTACAATACATTGTATTGCTAGATTTGCTCCATTTTTGTCTTACTTTCTTTATAACCCGGAGAAAACTGTGTGCATGGTGGACAGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGACATCGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTATGTGCACGCACTCTCATGTTGTTTGGTTGTGCTCAATGTTTCTGGTACAATAATCAGTGTCTGGACCACCTATTATGTAATAATAGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACCTTTCCTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTGAGACAGGTTCGGGGATTTTATTATTATTACTATTTAACTTTGGGATTTTCTACCTTCACATTTTTATGAATAATTACTCTGATCTTTAATTTATT

mRNA sequence

ATGAGGAGCGGTGAAGAGGTCCGAAAAACAAAAAGAAAAGAGAGATAAAATCGGGTCTCACAGTTTTATGACCTTCGCCTTCCGTTAGGTTTCATTATCCGAACCTCACACTTCGCCATTACTCTTTTCTTCTCAACTTCCTTGAAACCGGAGATTTTCTTGTGGATCTTCTTCATCAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGACATCGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTATGTGCACGCACTCTCATGTTGTTTGGTTGTGCTCAATGTTTCTGGTACAATAATCAGTGTCTGGACCACCTATTATGTAATAATAGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACCTTTCCTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTGAGACAGGTTCGGGGATTTTATTATTATTACTATTTAACTTTGGGATTTTCTACCTTCACATTTTTATGAATAATTACTCTGATCTTTAATTTATT

Coding sequence (CDS)

ATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGA
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: CBSX3_ARATH (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-74
Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQG +RSF+S GNVVK +VLQ +R+ NP ++P++F   + S   A +EE GFESTTI D+
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           +K+KGKSADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ ++AGIITER +   +
Sbjct: 61  MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTP+TKVLRAMQLMTDNRIRHIPVI DKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVV EHREEL RLNA+IQGGY
Sbjct: 181 GDVVRAVVHEHREELQRLNAYIQGGY 206

BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: YBP3_ACIAM (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1

Query: 80  TVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNVCRLSEKDYSARQNKLIT-- 139
           T+ +A + M +HN+G+LVV+    QN + GIITER     V   S +D  +   K +T  
Sbjct: 21  TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERDI---VKAASNRDIDSPVEKYMTKD 80

Query: 140 ---VTPDTKVLRAMQLMTDNRIRHIPVIDDKG-MKGMVSIGDVVRAVVSEHREELNRLNA 198
              VT DT+V  A+ +M +N  RH+P+I   G + G+VSI D+ RA++  H  +  +   
Sbjct: 81  VKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAE 139

BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: Y653_METJA (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0653 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-09
Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 1

Query: 76  TTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNVC--RLSEKDYSARQ- 135
           T + ++YD    MT++N+GA+V+V   E N   GI+TER     V    L  KD  A + 
Sbjct: 21  TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEV 80

Query: 136 --NKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSIGDVVR 179
              K+IT+  +  +  A ++M  + I+ +PV+ D  + G+V+  D+VR
Sbjct: 81  MSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125

BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: YLBB_BACSU (Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168) GN=ylbB PE=3 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 1

Query: 74  WCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNVCRL----SEKDYS 133
           +CT  D VY+A   M   NVGA+ VV   +  ++ GI+T+R        +    S+K   
Sbjct: 14  YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAIKKPNSQKITD 73

Query: 134 ARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSIGDV 177
           A   K ++V  D  V   + LM  +++R IPV  +K + G+V++GD+
Sbjct: 74  AMTEKPVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGDL 119

BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 40/138 (28.99%), Postives = 68/138 (49.28%), Query Frame = 1

Query: 79  DTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNVCRLSEK--DYSARQ---N 138
           +T  +    M +H +G++V+V   E++   GIITER     V    +   +  AR     
Sbjct: 21  ETAVEIAYKMREHGIGSVVIVN--EKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 80

Query: 139 KLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKG-MKGMVSIGDVVRA------------- 198
            +ITV  D +V  A++LM D  IR +P++DD G + G+V++ D+++              
Sbjct: 81  PVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMK 140

BLAST of CmoCh02G006800 vs. TrEMBL
Match: A0A0A0KG88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134340 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-85
Identity = 171/226 (75.66%), Postives = 182/226 (80.53%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIR+ANP MRPAM S F+TSA+SANIEEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGKSADGSWLWCTT+D+VYDAVQSMTQHNVGALVVVKPAEQNSIAGIITER +   +
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 CRLSEKDYSAR---------------------------QNKLITVTPDTKVLRAMQLMTD 180
                   S +                           QNKLITVTPDTKVL AMQLMTD
Sbjct: 121 IVQGRSSKSTKVGDIMTEEPHKTWERRMAMTICFGLCLQNKLITVTPDTKVLLAMQLMTD 180

Query: 181 NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 200
           NRIRHIPVID+KGMKGMVSIGDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 181 NRIRHIPVIDEKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY 226

BLAST of CmoCh02G006800 vs. TrEMBL
Match: A0A067DW69_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028667mg PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.4e-80
Identity = 158/206 (76.70%), Postives = 174/206 (84.47%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGA++SFLSHGN+VK+AVLQ+IRL NP +RP + S F  S +SA +EEHGFESTTI DI
Sbjct: 1   MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGK ADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ S+AGIITER +   +
Sbjct: 61  LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITV+PDTKVLRAMQLMTDNRIRHIPVIDDKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVVSEHREELNRLNAFIQGGY
Sbjct: 181 GDVVRAVVSEHREELNRLNAFIQGGY 205

BLAST of CmoCh02G006800 vs. TrEMBL
Match: V4T1P0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003449mg PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.4e-79
Identity = 157/205 (76.59%), Postives = 173/205 (84.39%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGA++SFLSHGN+VK+AVLQ+IRL NP +RP + S F  S +SA +EEHGFESTTI DI
Sbjct: 1   MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGK ADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ S+AGIITER +   +
Sbjct: 61  LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITV+PDTKVLRAMQLMTDNRIRHIPVIDDKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGG 199
           GDVVRAVVSEHREELNRLNAFIQGG
Sbjct: 181 GDVVRAVVSEHREELNRLNAFIQGG 204

BLAST of CmoCh02G006800 vs. TrEMBL
Match: G7K5X3_MEDTR (Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5g076080 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75
Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQG +RSFLS+GNV+K AVLQ++R+ NP ++P  FS F  SA  A IEEHGFESTTI DI
Sbjct: 50  MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE-SATPARIEEHGFESTTISDI 109

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LK KGK ADGSWLWCTTDDTVYDAV+SMTQ+NVGALVVVKP E+ SIAGIITER +   +
Sbjct: 110 LKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKI 169

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTPDTKVLRAMQLMTDNRIRHIPVI+DKGM GMVSI
Sbjct: 170 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSI 229

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVV EHR+EL+RLNA+IQGGY
Sbjct: 230 GDVVRAVVGEHRQELDRLNAYIQGGY 254

BLAST of CmoCh02G006800 vs. TrEMBL
Match: B7FJN7_MEDTR (Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5g076080 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75
Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQG +RSFLS+GNV+K AVLQ++R+ NP ++P  FS F  SA  A IEEHGFESTTI DI
Sbjct: 1   MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE-SATPARIEEHGFESTTISDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LK KGK ADGSWLWCTTDDTVYDAV+SMTQ+NVGALVVVKP E+ SIAGIITER +   +
Sbjct: 61  LKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTPDTKVLRAMQLMTDNRIRHIPVI+DKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVV EHR+EL+RLNA+IQGGY
Sbjct: 181 GDVVRAVVGEHRQELDRLNAYIQGGY 205

BLAST of CmoCh02G006800 vs. TAIR10
Match: AT5G10860.1 (AT5G10860.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 280.4 bits (716), Expect = 8.6e-76
Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQG +RSF+S GNVVK +VLQ +R+ NP ++P++F   + S   A +EE GFESTTI D+
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           +K+KGKSADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ ++AGIITER +   +
Sbjct: 61  MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTP+TKVLRAMQLMTDNRIRHIPVI DKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVV EHREEL RLNA+IQGGY
Sbjct: 181 GDVVRAVVHEHREELQRLNAYIQGGY 206

BLAST of CmoCh02G006800 vs. TAIR10
Match: AT1G47271.1 (AT1G47271.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 137.9 bits (346), Expect = 6.9e-33
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           M+  VR  L+  N V     +++         A F C T    S    E G E+ T+ D+
Sbjct: 1   MKAFVRGLLARANEVPKIHQRKVS--------AGFGCLT----SPPPPEKGLENLTVADV 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           L  K    D +W+ C T+DTV DAV++M +HN+G+LVV++P +Q  IAGI+TER +   +
Sbjct: 61  LSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQYIAGIVTERDYMKKI 120

Query: 121 CRLSEK-------DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
                        +    ++KL+TV+  T +++AMQLM++N IRH+PVID K + G++S+
Sbjct: 121 IGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVIDGK-IVGLISM 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
            DVV+A+V     EL RLN FI+G Y
Sbjct: 181 VDVVKAIVDHQNGELKRLNEFIKGDY 192

BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|659112534|ref|XP_008456267.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo])

HSP 1 Score: 335.9 bits (860), Expect = 4.9e-89
Identity = 174/206 (84.47%), Postives = 185/206 (89.81%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIR+ANP MRPAM S F+TSA+SANIEEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGKSADGSWLWCTT+D+VYDAVQSMTQHNVGALVVVKPAEQNSIAGIITER +   +
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 181 GDVVRAVVSEHREELDRLNAYIQGGY 206

BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|778712976|ref|XP_004139921.2| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 9.2e-88
Identity = 172/206 (83.50%), Postives = 184/206 (89.32%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIR+ANP MRPAM S F+TSA+SANIEEHGFESTTIDDI
Sbjct: 64  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 123

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGKSADGSWLWCTT+D+VYDAVQSMTQHNVGALVVVKPAEQNSIAGIITER +   +
Sbjct: 124 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 183

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITVTPDTKVL AMQLMTDNRIRHIPVID+KGMKGMVSI
Sbjct: 184 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMVSI 243

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 244 GDVVRAVVSEHREELDRLNAYIQGGY 269

BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|700191572|gb|KGN46776.1| (hypothetical protein Csa_6G134340 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 1.5e-85
Identity = 171/226 (75.66%), Postives = 182/226 (80.53%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGAVRSFLSHGNVVKTAVLQQIR+ANP MRPAM S F+TSA+SANIEEHGFESTTIDDI
Sbjct: 1   MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGKSADGSWLWCTT+D+VYDAVQSMTQHNVGALVVVKPAEQNSIAGIITER +   +
Sbjct: 61  LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120

Query: 121 CRLSEKDYSAR---------------------------QNKLITVTPDTKVLRAMQLMTD 180
                   S +                           QNKLITVTPDTKVL AMQLMTD
Sbjct: 121 IVQGRSSKSTKVGDIMTEEPHKTWERRMAMTICFGLCLQNKLITVTPDTKVLLAMQLMTD 180

Query: 181 NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 200
           NRIRHIPVID+KGMKGMVSIGDVVRAVVSEHREEL+RLNA+IQGGY
Sbjct: 181 NRIRHIPVIDEKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY 226

BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|568820965|ref|XP_006464969.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Citrus sinensis])

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 158/206 (76.70%), Postives = 174/206 (84.47%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGA++SFLSHGN+VK+AVLQ+IRL NP +RP + S F  S +SA +EEHGFESTTI DI
Sbjct: 1   MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGK ADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ S+AGIITER +   +
Sbjct: 61  LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITV+PDTKVLRAMQLMTDNRIRHIPVIDDKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGGY 200
           GDVVRAVVSEHREELNRLNAFIQGGY
Sbjct: 181 GDVVRAVVSEHREELNRLNAFIQGGY 205

BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|567878943|ref|XP_006432030.1| (hypothetical protein CICLE_v10003449mg [Citrus clementina])

HSP 1 Score: 302.0 bits (772), Expect = 7.8e-79
Identity = 157/205 (76.59%), Postives = 173/205 (84.39%), Query Frame = 1

Query: 1   MQGAVRSFLSHGNVVKTAVLQQIRLANPQMRPAMFSCFTTSANSANIEEHGFESTTIDDI 60
           MQGA++SFLSHGN+VK+AVLQ+IRL NP +RP + S F  S +SA +EEHGFESTTI DI
Sbjct: 1   MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 60

Query: 61  LKAKGKSADGSWLWCTTDDTVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERAFFSNV 120
           LKAKGK ADGSWLWCTTDDTVYDAV+SMTQHNVGALVVVKP EQ S+AGIITER +   +
Sbjct: 61  LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 120

Query: 121 C---RLSEK----DYSARQNKLITVTPDTKVLRAMQLMTDNRIRHIPVIDDKGMKGMVSI 180
               R S+     D    +NKLITV+PDTKVLRAMQLMTDNRIRHIPVIDDKGM GMVSI
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSI 180

Query: 181 GDVVRAVVSEHREELNRLNAFIQGG 199
           GDVVRAVVSEHREELNRLNAFIQGG
Sbjct: 181 GDVVRAVVSEHREELNRLNAFIQGG 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CBSX3_ARATH1.5e-7469.42CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CB... [more]
YBP3_ACIAM1.1e-1135.48Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=3 S... [more]
Y653_METJA6.5e-0933.33Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii (strain ATCC 430... [more]
YLBB_BACSU7.2e-0832.71Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168) GN=ylbB PE=3 SV=2[more]
Y525_METKA1.0e-0628.99Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 ... [more]
Match NameE-valueIdentityDescription
A0A0A0KG88_CUCSA1.0e-8575.66Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134340 PE=4 SV=1[more]
A0A067DW69_CITSI8.4e-8076.70Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028667mg PE=4 SV=1[more]
V4T1P0_9ROSI5.4e-7976.59Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003449mg PE=4 SV=1[more]
G7K5X3_MEDTR3.6e-7572.82Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5... [more]
B7FJN7_MEDTR3.6e-7572.82Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5... [more]
Match NameE-valueIdentityDescription
AT5G10860.18.6e-7669.42 Cystathionine beta-synthase (CBS) family protein[more]
AT1G47271.16.9e-3338.35 Cystathionine beta-synthase (CBS) family protein[more]
Match NameE-valueIdentityDescription
gi|659112534|ref|XP_008456267.1|4.9e-8984.47PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo][more]
gi|778712976|ref|XP_004139921.2|9.2e-8883.50PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus][more]
gi|700191572|gb|KGN46776.1|1.5e-8575.66hypothetical protein Csa_6G134340 [Cucumis sativus][more]
gi|568820965|ref|XP_006464969.1|1.2e-7976.70PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Citrus sinensis][more]
gi|567878943|ref|XP_006432030.1|7.8e-7976.59hypothetical protein CICLE_v10003449mg [Citrus clementina][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G006800.1CmoCh02G006800.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainPFAMPF00571CBScoord: 134..181
score: 1.7E-11coord: 75..115
score: 1.
IPR000644CBS domainSMARTSM00116cbs_1coord: 71..121
score: 0.17coord: 134..181
score: 1.3
IPR000644CBS domainPROFILEPS51371CBScoord: 68..128
score: 8.779coord: 130..187
score: 13
NoneNo IPR availableGENE3DG3DSA:3.10.580.10coord: 74..182
score: 8.4
NoneNo IPR availablePANTHERPTHR11911INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATEDcoord: 56..199
score: 3.1
NoneNo IPR availableunknownSSF54631CBS-domain paircoord: 71..192
score: 1.01