CmoCh02G006800 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGCGGTGAAGAGGTCCGAAAAACAAAAAGAAAAGAGAGATAAAATCGGGTCTCACAGTTTTATGACCTTCGCCTTCCGTTAGGTTTCATTATCCGAACCTCACACTTCGCCATTACTCTTTTCTTCTCAACTTCCTTGAAACCGGAGATTTTCTTGTGGATCTTCTTCATCAGGTATCTCTCTCTCTCTGTTTTTTTTTTGTTTGTTTTTGCCATTTCATCCTCATTTTGTTATCTATCGCATGAATCTTATCGTTTTTCTGCGATCAAGGTTGAACTCTGGTGTTTGGATTTGTTTTCGTTTCATCGTCTCTTGCTTGTAGTCACTTTCGATTTGTCCCTCGCTCTTTGTTTTAATGTGTTCGTGAATCACTGCTCTGCTGATTGATTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGTTATTTTGTATTTTGTCTGTTTCGTGTACTGATCTCGGATTTAGTGAGCTGGATCATGTTTGGTATTCCAGACGTTTAATTGGAGCTATTTTTTCATTGATTACATTAATTAATAGACCTGTGCTGGTTTTGACCGACGCCGGAGGATTCAAGAAGTGCTCCACTGAGTGTGTAATTAATTGATTTTCTTCATCTTGTATTCCCGTTCACATTCTTCCACACTAGGTCTTCTTATTTATGGAGTATTTTAATACGGATGAGCCGAGCCAATTTAATTTTATTGCTAAATCTGGCATTTAACTCGGAGAAAAGAGGAAAAATAGAATAGCTATCTCAGTTTCCAATGAAAGAAATGGCGGACATAGATCGTGCTTCTATTATCAAGCTTTTTGCAGGATGTTTTTTTTTCTTCTTTTTTCTTCTTGCTATGTGGATTTCTACATGTAAAATTTTTGTAACGAAAGTTTAAAATTATCATTTTCTTGAGTACGGGTGGATTTGTATTGGACTGCTGTCTTCTGATAAAATGGCACGCTCTTCAAGCTTTAGAGAGTTTATTGTACAATGTTAAGCGTCTGTTTCTACAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGGTATGCATCTCTGCACTGTTTGAAAGTTCTCATAATCTTTATAATTGTTTACTTCTGCTGCTATTTCTACTTACGCACTCCCCCTTTTTGAATAAAAAAGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGGTACGTGATATGATTTGCTTTATAAATGCAGATATTTCTCTGAATAAATGGGTTCAACTACAAAATTATGGTCCTATCCAATTATGAATGAAGAGATTCATTTACACTGTAGTTTGGGGAAAATAACAAATGCATGTACCCTTGATAACCACTTTTCTTTTTTGAATGCCAATATGTGTGGTGTGGTTGAGAATTTGAACCTTTAACATTTTTGTCGAAGAATATGTCTTAACTAGTTGAGTTATGCCTAGGTTGACTACTTTGTAAATTTTTGAAGTTCCCAATATTTTGCAATCGGCTAATTGTGCCAAATATTGGACTTCAAACTCGGGAAGTTCAAACTGCTGATCAGTTTCTTTTCGCGTTGCTAGTCTTTTCAAGAAACCTATCTAATGTTTTCTTGGAGGTGGAGAGTAAATTTGCATTACTTCTGCAGTTTTGGAGTACCCAAAATGGTTTCTGCTGAAGATTGTGCCGTGTAGACTAGAACCCTGTAATTTAAGATTAGCTGGCTTTACCTCTTAATTTTTGGATGAGACTGCCACAACGTAAGAATCGGTTTTGCGCCATTGTATGAATGAGAAAGAAATTGCATAAGTATTTTGAGCTTATATCTAGTGATTATTCAAGGTATTATAGATTTGAATCCACATCTAACCGTAATTAAAAGGTCACCACATTGTGGCATCTTCATTTAATAATTTTTCATTTATTTGTCATTTTCCCCCTTGCCTACAATTAGTTTTCCATGTACTATAACAATAGGGTGTTATTTCTAAGCTCTAGGTCCCATAAAGCATCTTCTCATCTTTTGGAATGCAATATCTCAACTTCAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGGTCTTCCAAGTCTACCAAAGTTGGGGATATCATGACTGAGGAGGTATAGTTCTGTCACCTTTTATGTTTATGTCAACCAGTCTGGTTTCTTCTTTACCTCCTGTTTAAAGATAATCGTTCTTTCTAGAGTTGCAATATTACCGTTAACTCTTCATAAATGACCTGAAATGATCTGACATGATTAGGATGTTTGCTTAGATTAAGTTTGAAACAATAACATTGAGTTGCATTGATTTTTTGCTCAACATTCTATCAATTTTTTTACTCCAAAGTTAGTTTTGAAACATTTATGAAAGATTAAGGTTAATGGTAATATTGCAAAATTTTGAAAGGAGTATTTTTTAAACTAGGGACAAAGTTTAAGGGTATTTAGTTTCATCACTATGATGACCATCCATGGATTCACCTATTTAGATTTAAGATTGAAAGAATGACACCCAGTCACTTAGATTTTTTATTCAACGTTTTAACAAATTTTTTACTCTAATGGTAGATTTGAAACATTTACAAAAGTTGAAGGTAGTTTCACAACATTTGAAAGAATAGGGGTACAAGTAACAAAGTTCATGGGTCGTTTTTATAATTTAGTTTTTGTTTCCTAGAAAAATCAACTACCTTTATTTGCATAGGTATATATGGATGTACTTTATTTTTATTTTTTTTATTTTTATTTTATGAATAAACAAATCACTTGATGTTGCTTTGATTTGCACACGTGCCTCGATTATTTGTTTAATCTACCCTCCATCTACATAATAGCCACACAAAATATTAGAACTTCGAACAGCAATGACAAATTCCTTTAATTTGTGTTTGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGGTATTACAATACATTGTATTGCTAGATTTGCTCCATTTTTGTCTTACTTTCTTTATAACCCGGAGAAAACTGTGTGCATGGTGGACAGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGACATCGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTATGTGCACGCACTCTCATGTTGTTTGGTTGTGCTCAATGTTTCTGGTACAATAATCAGTGTCTGGACCACCTATTATGTAATAATAGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACCTTTCCTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTGAGACAGGTTCGGGGATTTTATTATTATTACTATTTAACTTTGGGATTTTCTACCTTCACATTTTTATGAATAATTACTCTGATCTTTAATTTATT ATGAGGAGCGGTGAAGAGGTCCGAAAAACAAAAAGAAAAGAGAGATAAAATCGGGTCTCACAGTTTTATGACCTTCGCCTTCCGTTAGGTTTCATTATCCGAACCTCACACTTCGCCATTACTCTTTTCTTCTCAACTTCCTTGAAACCGGAGATTTTCTTGTGGATCTTCTTCATCAGGTGAAGATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGACATCGCTTGCTTGCTTGCTGCTGGTATGATGTTTGGAAAAACCAGAACGGTTCAGCTCTTGTAAATATAGCCTGGTATGTGCACGCACTCTCATGTTGTTTGGTTGTGCTCAATGTTTCTGGTACAATAATCAGTGTCTGGACCACCTATTATGTAATAATAGACGCCAACTTTGCTTTCCTAATTTCCTCCCTAAGCTACCTTTCCTTTTATGGAGATGACAAAATTCTCCCGACGTGGCGACTCACCCTGAATGAAGCAATCAATTTCTGCTTGAGACAGGTTCGGGGATTTTATTATTATTACTATTTAACTTTGGGATTTTCTACCTTCACATTTTTATGAATAATTACTCTGATCTTTAATTTATT ATGCAAGGTGCTGTGCGATCATTTCTATCACACGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTCTAGCAAACCCCCAGATGAGGCCTGCAATGTTTTCATGCTTTACGACATCAGCTAATTCTGCAAACATTGAAGAACATGGCTTTGAAAGCACTACTATTGATGATATCTTGAAAGCAAAAGGCAAAAGTGCTGACGGATCATGGCTTTGGTGCACTACAGATGACACAGTTTACGATGCCGTCCAGTCGATGACTCAGCACAATGTTGGAGCCTTGGTGGTTGTTAAGCCTGCGGAGCAAAATTCAATTGCTGGTATTATAACAGAAAGAGCTTTCTTTTCGAACGTTTGTAGATTATCTGAGAAAGATTATAGTGCAAGGCAGAACAAACTTATCACTGTGACACCCGACACCAAGGTTTTGCGAGCCATGCAACTTATGACTGATAACCGAATTAGGCACATACCCGTCATTGATGACAAGGGTATGAAAGGCATGGTGTCGATCGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTAAACCGCCTGAACGCTTTTATTCAGGGAGGTTATTGA
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: CBSX3_ARATH (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CBSX3 PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.5e-74 Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 1
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: YBP3_ACIAM (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 1
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: Y653_METJA (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0653 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 6.5e-09 Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 1
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: YLBB_BACSU (Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168) GN=ylbB PE=3 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08 Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 1
BLAST of CmoCh02G006800 vs. Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=3 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06 Identity = 40/138 (28.99%), Postives = 68/138 (49.28%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TrEMBL
Match: A0A0A0KG88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134340 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.0e-85 Identity = 171/226 (75.66%), Postives = 182/226 (80.53%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TrEMBL
Match: A0A067DW69_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028667mg PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 8.4e-80 Identity = 158/206 (76.70%), Postives = 174/206 (84.47%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TrEMBL
Match: V4T1P0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003449mg PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 5.4e-79 Identity = 157/205 (76.59%), Postives = 173/205 (84.39%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TrEMBL
Match: G7K5X3_MEDTR (Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5g076080 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75 Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TrEMBL
Match: B7FJN7_MEDTR (Cystathionine beta-synthase (CBS) family protein OS=Medicago truncatula GN=MTR_5g076080 PE=2 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75 Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TAIR10
Match: AT5G10860.1 (AT5G10860.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 280.4 bits (716), Expect = 8.6e-76 Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 1
BLAST of CmoCh02G006800 vs. TAIR10
Match: AT1G47271.1 (AT1G47271.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 137.9 bits (346), Expect = 6.9e-33 Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 1
BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|659112534|ref|XP_008456267.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo]) HSP 1 Score: 335.9 bits (860), Expect = 4.9e-89 Identity = 174/206 (84.47%), Postives = 185/206 (89.81%), Query Frame = 1
BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|778712976|ref|XP_004139921.2| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 9.2e-88 Identity = 172/206 (83.50%), Postives = 184/206 (89.32%), Query Frame = 1
BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|700191572|gb|KGN46776.1| (hypothetical protein Csa_6G134340 [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.5e-85 Identity = 171/226 (75.66%), Postives = 182/226 (80.53%), Query Frame = 1
BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|568820965|ref|XP_006464969.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Citrus sinensis]) HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79 Identity = 158/206 (76.70%), Postives = 174/206 (84.47%), Query Frame = 1
BLAST of CmoCh02G006800 vs. NCBI nr
Match: gi|567878943|ref|XP_006432030.1| (hypothetical protein CICLE_v10003449mg [Citrus clementina]) HSP 1 Score: 302.0 bits (772), Expect = 7.8e-79 Identity = 157/205 (76.59%), Postives = 173/205 (84.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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