Lsi10G014760 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G014760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	chr10 : 18887590 .. 18888162 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTCCCAGTACAAAATTACTACGAAACATTTGCATAGCCATATTGCTTTGTCTAATTATTACCGTAATTTTGATCCTCATTTTAGCGTTTACCGTTTTCAAGCCCAAACGGCCTATCATCGCCGTCGATTCAGTTTCTCTCCTCGATCTGAACGTTTCTCTGGTCGGCGGCGTCGATCTGAATCTGTCTCTCATGGTAGATCTATCCGTCGAGAATCCGAATAAAGTTGCCTTTGAATACTCTGAAAGCACCGCCGTTGTGAGTTACAGAGGCGAAGAAGTCGGAGTAGCGCCGATTCCATCTGGCCGATTATCGGCCAAAGGGACTGAGAAAATGAACCTAACGCTGACGTTGATGGCAGACCGGATGCTGGCGAAGTCGGAGGTGTTCTCCGACGTGGTTTCCGGTCAACTTCCGATCAGTACTTTCGCTCGGTTGTCCGGAAAAGTGAAGGTGATCGGTGTTTTCAAGATACATGTTGTGGCGTCGTCGTCTTGTGATCTCACCATTGATATTAAAAATGGAAGCATTGGAGATCAGCAATGCCAGTACCGGACGAAGCTCTGA

mRNA sequence

ATGGCCGCTCCCAGTACAAAATTACTACGAAACATTTGCATAGCCATATTGCTTTGTCTAATTATTACCGTAATTTTGATCCTCATTTTAGCGTTTACCGTTTTCAAGCCCAAACGGCCTATCATCGCCGTCGATTCAGTTTCTCTCCTCGATCTGAACGTTTCTCTGGTCGGCGGCGTCGATCTGAATCTGTCTCTCATGGTAGATCTATCCGTCGAGAATCCGAATAAAGTTGCCTTTGAATACTCTGAAAGCACCGCCGTTGTGAGTTACAGAGGCGAAGAAGTCGGAGTAGCGCCGATTCCATCTGGCCGATTATCGGCCAAAGGGACTGAGAAAATGAACCTAACGCTGACGTTGATGGCAGACCGGATGCTGGCGAAGTCGGAGGTGTTCTCCGACGTGGTTTCCGGTCAACTTCCGATCAGTACTTTCGCTCGGTTGTCCGGAAAAGTGAAGGTGATCGGTGTTTTCAAGATACATGTTGTGGCGTCGTCGTCTTGTGATCTCACCATTGATATTAAAAATGGAAGCATTGGAGATCAGCAATGCCAGTACCGGACGAAGCTCTGA

Coding sequence (CDS)

ATGGCCGCTCCCAGTACAAAATTACTACGAAACATTTGCATAGCCATATTGCTTTGTCTAATTATTACCGTAATTTTGATCCTCATTTTAGCGTTTACCGTTTTCAAGCCCAAACGGCCTATCATCGCCGTCGATTCAGTTTCTCTCCTCGATCTGAACGTTTCTCTGGTCGGCGGCGTCGATCTGAATCTGTCTCTCATGGTAGATCTATCCGTCGAGAATCCGAATAAAGTTGCCTTTGAATACTCTGAAAGCACCGCCGTTGTGAGTTACAGAGGCGAAGAAGTCGGAGTAGCGCCGATTCCATCTGGCCGATTATCGGCCAAAGGGACTGAGAAAATGAACCTAACGCTGACGTTGATGGCAGACCGGATGCTGGCGAAGTCGGAGGTGTTCTCCGACGTGGTTTCCGGTCAACTTCCGATCAGTACTTTCGCTCGGTTGTCCGGAAAAGTGAAGGTGATCGGTGTTTTCAAGATACATGTTGTGGCGTCGTCGTCTTGTGATCTCACCATTGATATTAAAAATGGAAGCATTGGAGATCAGCAATGCCAGTACCGGACGAAGCTCTGA

Protein sequence

MAAPSTKLLRNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGVDLNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQYRTKL

Homology

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BLAST of Lsi10G014760 vs. TrEMBL
Match: A0A0A0KBX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G212910 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-68
Identity = 144/189 (76.19%), Postives = 161/189 (85.19%), Query Frame = 1


Query: 2   AAPSTKLLRNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGVD 61
           AAP++KLL NIC+ + L LI+ ++  LILAFTVFKPK+PII VDSVSLLDLNVS+  GV 
Sbjct: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62

Query: 62  LNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLM 121
           L+LSL VDL+V+NPNKV FEYSESTAVV YRGE+VG APIP GRL  KGTEKMNLTLT+M
Sbjct: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122

Query: 122 ADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGD 181
            DRML KSEVFSDVVSGQLPISTFARL GKVKV+ V KIHVVAS+SCDL ID+KN S GD
Sbjct: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182

Query: 182 QQCQYRTKL 191
           Q CQYRT L
Sbjct: 183 QLCQYRTTL 191

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BLAST of Lsi10G014760 vs. TrEMBL
Match: A0A061EK34_THECC (Harpin-induced 1, putative OS=Theobroma cacao GN=TCM_019926 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.7e-48
Identity = 103/184 (55.98%), Postives = 143/184 (77.72%), Query Frame = 1


Query: 10  RNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVG---GVDLNLSL 69
           RNIC A++  L+  ++LI+ILAFTVFK KRP+  +DSVSL +L  SL      V LN SL
Sbjct: 32  RNICFAVMAVLLFIIVLIVILAFTVFKAKRPVTTIDSVSLANLKFSLDLVRLQVLLNASL 91

Query: 70  MVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRML 129
            VDLS++NPNKVAF+Y++S+A ++YRG++VG  PIP+G++ A  T  MNLTLTLMADR+L
Sbjct: 92  DVDLSIKNPNKVAFKYTDSSAQLNYRGQQVGEVPIPAGKMPADATVPMNLTLTLMADRLL 151

Query: 130 AKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQY 189
           + S+ FSDV  G+LP++ FAR+ GKV ++ +FKIHVV+S+SCD T+ + N ++GDQ C+Y
Sbjct: 152 SDSQFFSDVSGGELPLNAFARIPGKVNLLNLFKIHVVSSTSCDFTVFLSNSTVGDQDCKY 211

Query: 190 RTKL 191
           +TKL
Sbjct: 212 KTKL 215

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BLAST of Lsi10G014760 vs. TrEMBL
Match: A0A0A0L094_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 102/193 (52.85%), Postives = 146/193 (75.65%), Query Frame = 1


Query: 2   AAPSTKLLRNICIAILLC-LIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSL-VGG 61
           AA  ++  RN CI I +  L++ +I+I+ILAFTVFK KRPI  V+SV+L DL+VSL + G
Sbjct: 23  AATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAKRPITTVNSVALADLDVSLNLAG 82

Query: 62  V--DLNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLT 121
           V  D+N++L+ D+++ NPNKV F Y  STA ++YRGE VG API +G++ A   ++MN+T
Sbjct: 83  VSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNIT 142

Query: 122 LTLMADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNG 181
           LT+MADR+L  + VF+D V+G +P++T+ R+SGKVK++G+F IHVV+S+SCD  +DI   
Sbjct: 143 LTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKILGIFNIHVVSSTSCDFNVDISER 202

Query: 182 SIGDQQCQYRTKL 191
            IGDQQC Y TK+
Sbjct: 203 KIGDQQCNYHTKI 215

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BLAST of Lsi10G014760 vs. TrEMBL
Match: I1JJY4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G000800 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.4e-45
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 10  RNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVG---GVDLNLSL 69
           R +C+ +   +I  V+LI+ILA TVFK K P+  VDS  L D +VSL      VDLN++L
Sbjct: 9   RKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDLNVTL 68

Query: 70  MVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRML 129
            VD+SV+NPNKV F+YS+STA ++YRG+ +G  PI +G +S+  T+  NLTLT+MADR+L
Sbjct: 69  GVDVSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMADRLL 128

Query: 130 AKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQY 189
           + S++ SDV SG LP++TF R+SGKV ++G  K+HVV+S+SCD+ I++ NG++G+Q+CQY
Sbjct: 129 SNSQLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQECQY 188

Query: 190 RTKL 191
           +TKL
Sbjct: 189 KTKL 192

[Close]

BLAST of Lsi10G014760 vs. TrEMBL
Match: A0A0B2S5Z3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021611 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.4e-45
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 10  RNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVG---GVDLNLSL 69
           R +C+ +   +I  V+LI+ILA TVFK K P+  VDS  L D +VSL      VDLN++L
Sbjct: 9   RKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDLNVTL 68

Query: 70  MVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRML 129
            VD+SV+NPNKV F+YS+STA ++YRG+ +G  PI +G +S+  T+  NLTLT+MADR+L
Sbjct: 69  GVDVSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMADRLL 128

Query: 130 AKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQY 189
           + S++ SDV SG LP++TF R+SGKV ++G  K+HVV+S+SCD+ I++ NG++G+Q+CQY
Sbjct: 129 SNSQLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQECQY 188

Query: 190 RTKL 191
           +TKL
Sbjct: 189 KTKL 192

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BLAST of Lsi10G014760 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 169.1 bits (427), Expect = 2.7e-42
Identity = 88/182 (48.35%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 12  ICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVS---LVGGVDLNLSLMV 71
           IC  ILL L+I ++++ ILAFT+FKPKRP   +DSV++  L  S   L+  V LNL+L V
Sbjct: 55  ICFTILLILLIAIVIV-ILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNV 114

Query: 72  DLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRMLAK 131
           DLS++NPN++ F Y  S+A+++YRG+ +G AP+P+ R++A+ T  +N+TLTLMADR+L++
Sbjct: 115 DLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSE 174

Query: 132 SEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQYRT 191
           +++ SDV++G +P++TF +++GKV V+ +FKI V +SSSCDL+I + + ++  Q C+Y T
Sbjct: 175 TQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYST 234

[Close]

BLAST of Lsi10G014760 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-20
Identity = 62/188 (32.98%), Postives = 110/188 (58.51%), Query Frame = 1


Query: 11  NICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLN-------VSLVGGVDLN 70
           +IC+     ++ T++L L+  FTVF+ K PII ++ V +  L+       V L+G    N
Sbjct: 39  SICVTATSLILTTIVLTLV--FTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLG---TN 98

Query: 71  LSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMAD 130
           +S++VD+SV+NPN  +F+YS +T  + Y+G  VG A    G+     T +MN+T+ +M D
Sbjct: 99  ISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLD 158

Query: 131 RMLAKSEVFSDVV-SGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQ 190
           R+L+   +  ++  SG + + ++ R+ GKVK++G+ K HV    +C + ++I   +I D 
Sbjct: 159 RILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDV 218

[Close]

BLAST of Lsi10G014760 vs. TAIR10
Match: AT4G23930.1 (AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-09
Identity = 45/180 (25.00%), Postives = 87/180 (48.33%), Query Frame = 1


Query: 13  CIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGVDLNLSLMVDLSV 72
           C    L ++  +I  L +  TVF+P+ P I+V SV +   +V+      ++ +     +V
Sbjct: 11  CAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVA---NSSVSFTFSQFSAV 70

Query: 73  ENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRMLAKSEVF 132
            NPN+ AF +  +   + Y G  +G   +P+G + +  T++M  T ++ +  + A S   
Sbjct: 71  RNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASSSQ 130

Query: 133 --------SDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQC 185
                   SD     + I +   ++G+V+V+G+F   + A  +C + I   +GSI   +C
Sbjct: 131 ISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIVAVRC 187

[Close]

BLAST of Lsi10G014760 vs. TAIR10
Match: AT1G64450.1 (AT1G64450.1 Glycine-rich protein family)

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 1


Query: 13  CIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGVDLNLSLMVDLSV 72
           C    + L+I ++++L++ FTVFKPK P I+V++V L    VS       N S    ++V
Sbjct: 19  CAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVS---NNTANFSFSQYVAV 78

Query: 73  ENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTL 121
            NPN+  F + +S+  + Y G +VG   IP+G++ +   + M  T T+
Sbjct: 79  RNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATFTV 123

[Close]

BLAST of Lsi10G014760 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-07
Identity = 48/186 (25.81%), Postives = 91/186 (48.92%), Query Frame = 1


Query: 12  ICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGV------DLNLS 71
           +  A L  L++ V+LI+ILA    KPK+P   +  V+++ + +S    V       L+L+
Sbjct: 46  LLFAFLALLVLAVVLIVILAV---KPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLT 105

Query: 72  LMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRM 131
           + +  +  NPNKV   Y ES+  V Y+G  +G A +P     A  T+  N+  T+  DR+
Sbjct: 106 IRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTK--NVEATISVDRV 165

Query: 132 LAKSEVFSDVV-----SGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIG 187
                  +D+V     + ++ ++    +  K++V+      V  S +C + I  +  ++ 
Sbjct: 166 NLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALI 225

[Close]

BLAST of Lsi10G014760 vs. NCBI nr
Match: gi|659130711|ref|XP_008465308.1| (PREDICTED: uncharacterized protein LOC103502964 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 144/190 (75.79%), Postives = 169/190 (88.95%), Query Frame = 1


Query: 1   MAAPSTKLLRNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGV 60
           MAAP++KLLRN CI ++L LI+ V+L+L+LAFTVFKP+RPII VDSVSLLDLNV+L  GV
Sbjct: 1   MAAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDGV 60

Query: 61  DLNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTL 120
           DLNLS+ VDL+VENPNKVAFEYS+STAVV YRGE+VG APIP GRL  KGT+KMNLTLT+
Sbjct: 61  DLNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLTI 120

Query: 121 MADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIG 180
           M +RML +SEVFSDVVSGQL IST ARL+GKVKV+GV KIHVVAS+SCDL ID+KNGS G
Sbjct: 121 MGERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSFG 180

Query: 181 DQQCQYRTKL 191
           DQ CQ+RT++
Sbjct: 181 DQLCQFRTRV 190

[Close]

BLAST of Lsi10G014760 vs. NCBI nr
Match: gi|778722187|ref|XP_011658424.1| (PREDICTED: uncharacterized protein LOC105435999 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 2.6e-68
Identity = 144/189 (76.19%), Postives = 161/189 (85.19%), Query Frame = 1


Query: 2   AAPSTKLLRNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGGVD 61
           AAP++KLL NIC+ + L LI+ ++  LILAFTVFKPK+PII VDSVSLLDLNVS+  GV 
Sbjct: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62

Query: 62  LNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLM 121
           L+LSL VDL+V+NPNKV FEYSESTAVV YRGE+VG APIP GRL  KGTEKMNLTLT+M
Sbjct: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122

Query: 122 ADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGD 181
            DRML KSEVFSDVVSGQLPISTFARL GKVKV+ V KIHVVAS+SCDL ID+KN S GD
Sbjct: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182

Query: 182 QQCQYRTKL 191
           Q CQYRT L
Sbjct: 183 QLCQYRTTL 191

[Close]

BLAST of Lsi10G014760 vs. NCBI nr
Match: gi|590654845|ref|XP_007033816.1| (Harpin-induced 1, putative [Theobroma cacao])

HSP 1 Score: 199.1 bits (505), Expect = 6.8e-48
Identity = 103/184 (55.98%), Postives = 143/184 (77.72%), Query Frame = 1


Query: 10  RNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVG---GVDLNLSL 69
           RNIC A++  L+  ++LI+ILAFTVFK KRP+  +DSVSL +L  SL      V LN SL
Sbjct: 32  RNICFAVMAVLLFIIVLIVILAFTVFKAKRPVTTIDSVSLANLKFSLDLVRLQVLLNASL 91

Query: 70  MVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRML 129
            VDLS++NPNKVAF+Y++S+A ++YRG++VG  PIP+G++ A  T  MNLTLTLMADR+L
Sbjct: 92  DVDLSIKNPNKVAFKYTDSSAQLNYRGQQVGEVPIPAGKMPADATVPMNLTLTLMADRLL 151

Query: 130 AKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQY 189
           + S+ FSDV  G+LP++ FAR+ GKV ++ +FKIHVV+S+SCD T+ + N ++GDQ C+Y
Sbjct: 152 SDSQFFSDVSGGELPLNAFARIPGKVNLLNLFKIHVVSSTSCDFTVFLSNSTVGDQDCKY 211

Query: 190 RTKL 191
           +TKL
Sbjct: 212 KTKL 215

[Close]

BLAST of Lsi10G014760 vs. NCBI nr
Match: gi|1012118116|ref|XP_015961646.1| (PREDICTED: uncharacterized protein LOC107485620 [Arachis duranensis])

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-46
Identity = 99/184 (53.80%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 10  RNICIAILLCLIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLVGG---VDLNLSL 69
           R +C+ +   +I  V+LI+ILA TVFK K P+  VDS+ L DL VSL      VDLN++L
Sbjct: 9   RKVCLVVTGVVIAIVLLIVILAMTVFKAKHPVNTVDSLRLQDLKVSLDIARLSVDLNVTL 68

Query: 70  MVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLTLTLMADRML 129
            VD+SV+NPNKV F+YS+S+A ++YRG++VG  PIP+G +SA  T+  NLTLT+MADR+L
Sbjct: 69  DVDVSVKNPNKVGFKYSDSSAQLNYRGQQVGEVPIPAGEISADETKGFNLTLTIMADRLL 128

Query: 130 AKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNGSIGDQQCQY 189
           + S+V+SDV+SG LP+STF R+SGKV ++G  K+HVV+S++CD  +++ N ++G Q+CQY
Sbjct: 129 SNSQVYSDVISGSLPLSTFVRMSGKVSILGFIKVHVVSSTTCDFAVNLSNRTVGHQECQY 188

Query: 190 RTKL 191
           +TKL
Sbjct: 189 KTKL 192

[Close]

BLAST of Lsi10G014760 vs. NCBI nr
Match: gi|659126678|ref|XP_008463309.1| (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 102/193 (52.85%), Postives = 145/193 (75.13%), Query Frame = 1


Query: 2   AAPSTKLLRNICIAILLC-LIITVILILILAFTVFKPKRPIIAVDSVSLLDLNVSLV--- 61
           AA  ++  RN CI I +  L++ +ILI+ILAFTVFK KRPI  V+SV+L DL+VSL    
Sbjct: 24  AAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKAKRPITTVNSVALADLDVSLNLAR 83

Query: 62  GGVDLNLSLMVDLSVENPNKVAFEYSESTAVVSYRGEEVGVAPIPSGRLSAKGTEKMNLT 121
             VD+N++L+  +++ NPNKV F Y  STA ++YRGE VG API +G++ A   ++MN+T
Sbjct: 84  VSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNIT 143

Query: 122 LTLMADRMLAKSEVFSDVVSGQLPISTFARLSGKVKVIGVFKIHVVASSSCDLTIDIKNG 181
           LT+MADR+L  + VFSDVV+G +P++T+AR+SGKVK++G+F IHVV+++SCD  +DI   
Sbjct: 144 LTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKILGIFNIHVVSTTSCDFNVDISER 203

Query: 182 SIGDQQCQYRTKL 191
            +GDQQC Y TK+
Sbjct: 204 KVGDQQCNYHTKI 216

The following BLAST results are available for this feature:

BLAST of Lsi10G014760 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G014760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBX8_CUCSA	1.8e-68	76.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G212910 PE=4 SV=1	[more]
A0A061EK34_THECC	4.7e-48	55.98	Harpin-induced 1, putative OS=Theobroma cacao GN=TCM_019926 PE=4 SV=1	[more]
A0A0A0L094_CUCSA	2.0e-46	52.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1	[more]
I1JJY4_SOYBN	6.4e-45	52.72	Uncharacterized protein OS=Glycine max GN=GLYMA_03G000800 PE=4 SV=1	[more]
A0A0B2S5Z3_GLYSO	6.4e-45	52.72	Uncharacterized protein OS=Glycine soja GN=glysoja_021611 PE=4 SV=1	[more]

BLAST of Lsi10G014760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54200.1	2.7e-42	48.35	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G46150.1	4.9e-20	32.98	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT4G23930.1	2.3e-09	25.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G64450.1	2.8e-07	33.33	Glycine-rich protein family	[more]
AT2G01080.1	8.1e-07	25.81	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Lsi10G014760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130711\|ref\|XP_008465308.1\|	1.3e-70	75.79	PREDICTED: uncharacterized protein LOC103502964 [Cucumis melo]	[more]
gi\|778722187\|ref\|XP_011658424.1\|	2.6e-68	76.19	PREDICTED: uncharacterized protein LOC105435999 [Cucumis sativus]	[more]
gi\|590654845\|ref\|XP_007033816.1\|	6.8e-48	55.98	Harpin-induced 1, putative [Theobroma cacao]	[more]
gi\|1012118116\|ref\|XP_015961646.1\|	2.2e-46	53.80	PREDICTED: uncharacterized protein LOC107485620 [Arachis duranensis]	[more]
gi\|659126678\|ref\|XP_008463309.1\|	2.9e-46	52.85	PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G014760.1	Lsi10G014760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 70..162 score: 1.4
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 12..190 score: 1.0
None	No IPR available	PANTHER	PTHR31852:SF43	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 12..190 score: 1.0
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 24..161 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G014760	Csa6G212910	Cucumber (Chinese Long) v2	culsiB419
Lsi10G014760	CSPI06G15050	Wild cucumber (PI 183967)	cpilsiB422
Lsi10G014760	CmoCh20G003410	Cucurbita moschata (Rifu)	cmolsiB490
Lsi10G014760	Cla013411	Watermelon (97103) v1	lsiwmB078
Lsi10G014760	MELO3C026872	Melon (DHL92) v3.5.1	lsimeB043
Lsi10G014760	ClCG02G019140	Watermelon (Charleston Gray)	lsiwcgB054
Lsi10G014760	MELO3C026872.2	Melon (DHL92) v3.6.1	lsimedB046
Lsi10G014760	Cla97C02G045060	Watermelon (97103) v2	lsiwmbB052
Lsi10G014760	Bhi10G000678	Wax gourd	lsiwgoB068
Lsi10G014760	Cp4.1LG05g09910	Cucurbita pepo (Zucchini)	cpelsiB588
Lsi10G014760	Cp4.1LG16g06730	Cucurbita pepo (Zucchini)	cpelsiB219
Lsi10G014760	CsGy6G015290	Cucumber (Gy14) v2	cgyblsiB375
Lsi10G014760	Carg03389	Silver-seed gourd	carlsiB303
Lsi10G014760	Carg11762	Silver-seed gourd	carlsiB966
Lsi10G014760	CsaV3_6G019050	Cucumber (Chinese Long) v3	cuclsiB433

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G014760	Watermelon (97103) v1	lsiwmB056
Lsi10G014760	Melon (DHL92) v3.6.1	lsimedB057
Lsi10G014760	Cucumber (Chinese Long) v3	cuclsiB359
Lsi10G014760	Watermelon (97103) v2	lsiwmbB069
Lsi10G014760	Cucurbita maxima (Rimu)	cmalsiB399
Lsi10G014760	Cucurbita maxima (Rimu)	cmalsiB506
Lsi10G014760	Cucurbita maxima (Rimu)	cmalsiB547
Lsi10G014760	Cucurbita moschata (Rifu)	cmolsiB384
Lsi10G014760	Cucurbita moschata (Rifu)	cmolsiB579
Lsi10G014760	Cucurbita moschata (Rifu)	cmolsiB532