Carg11762 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11762
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_035 : 1342168 .. 1342746 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

mRNA sequence

ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

Coding sequence (CDS)

ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

Protein sequence

MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL

Homology

[Close]

BLAST of Carg11762 vs. NCBI nr
Match: XP_022948127.1 (uncharacterized protein LOC111451800 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 4.4e-67
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAALNRKRRNICIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARF 60
           MAALNRKRRNICIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARF
Sbjct: 1   MAALNRKRRNICIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARF 60

Query: 61  RVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
           RVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL
Sbjct: 61  RVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN
Sbjct: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRCKYRTKL
Sbjct: 181 VEDQRCKYRTKL 192

[Close]

BLAST of Carg11762 vs. NCBI nr
Match: XP_023534551.1 (uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 8.1e-61
Identity = 150/192 (78.12%), Postives = 154/192 (80.21%), Query Frame = 0


Query: 1   MAALNRKRRNICIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARF 60
           MAALNRKRRNICI    XXXXXXXXXXXXXX                         AARF
Sbjct: 1   MAALNRKRRNICIAVLLXXXXXXXXXXXXXXTVFKPKQPTITVDSLSLLDLNISLNAARF 60

Query: 61  RVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VD  LTLIV LT+ENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTLENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADR+LAKSEL SDVL GELPISTFARL GKV VIGVFKIRVVALSSCDLTI+IR RN
Sbjct: 121 TMMADRMLAKSELFSDVLTGELPISTFARLAGKVTVIGVFKIRVVALSSCDLTINIRNRN 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRC+YRTKL
Sbjct: 181 VEDQRCEYRTKL 192

[Close]

BLAST of Carg11762 vs. NCBI nr
Match: XP_023007254.1 (uncharacterized protein LOC111499794 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 156/192 (81.25%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 1   MAALNRKRRNICIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARF 60
           MAALNRKRRNICI XXXXXXXXXXXXXXXXXXXX                      AARF
Sbjct: 1   MAALNRKRRNICIAXXXXXXXXXXXXXXXXXXXXKPKQPTITVDSVSLLDLNISLNAARF 60

Query: 61  RVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VD  LTLIV LTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLS DGTEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SDV+AGELPISTFARL GK+ VIGVFKIRVVALSSCDLTIDIR R+
Sbjct: 121 TMMADRLLAKSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRS 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRC+YRTKL
Sbjct: 181 VEDQRCEYRTKL 192

[Close]

BLAST of Carg11762 vs. NCBI nr
Match: XP_023512272.1 (uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 5.4e-41
Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 57  AARFRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKM 116
           AAR  VD  L+L++ L+VENPNKVAF++S  TAVVSYRGEE+ EAPIP+GRL AD TEKM
Sbjct: 57  AARLSVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKM 116

Query: 117 NLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDI 176
           NLTLTMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCD TI I
Sbjct: 117 NLTLTMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGI 176

Query: 177 RKRNVEDQRCKY 189
             R+++DQ+C Y
Sbjct: 177 GNRSIKDQKCHY 188

[Close]

BLAST of Carg11762 vs. NCBI nr
Match: XP_022944105.1 (uncharacterized protein LOC111448649 [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 57  AARFRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKM 116
           AAR  VD  L+L++ L++ENPNKVAF++S  TAVVSYRGEE+ EAPIP+G L AD TEKM
Sbjct: 57  AARLSVDLNLSLLLDLSIENPNKVAFEYSYTTAVVSYRGEELGEAPIPAGWLPADRTEKM 116

Query: 117 NLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDI 176
           NLTLTMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I
Sbjct: 117 NLTLTMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGI 176

Query: 177 RKRNVEDQRCKY 189
             R++EDQ+C Y
Sbjct: 177 GNRSIEDQKCHY 188

[Close]

BLAST of Carg11762 vs. TAIR10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 138.3 bits (347), Expect = 5.1e-33
Identity = 64/127 (50.39%), Postives = 99/127 (77.95%), Query Frame = 0


Query: 66  LTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMAD 125
           LTL V L+++NPN++ F +   +A+++YRG+ + EAP+P+ R++A  T  +N+TLT+MAD
Sbjct: 109 LTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMAD 168

Query: 126 RLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQR 185
           RLL++++LLSDV+AG +P++TF ++ GKV V+ +FKI+V + SSCDL+I +  RNV  Q 
Sbjct: 169 RLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQH 228

Query: 186 CKYRTKL 193
           CKY TKL
Sbjct: 229 CKYSTKL 235

[Close]

BLAST of Carg11762 vs. TAIR10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15
Identity = 43/134 (32.09%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 60  FRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLT 119
           + V    TL + + ++NPN   F++     +V YR   V    +PS  L A G+  +   
Sbjct: 56  YEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCP 115

Query: 120 LTMMADRLLAK-SELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRK 179
           L +  D+ +A   +++ DVL G++ + T A++PGK+ ++G+FKI + ++S C+L +    
Sbjct: 116 LFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPS 175

Query: 180 RNVEDQRCKYRTKL 193
             VEDQ C  +TKL
Sbjct: 176 MVVEDQVCDLKTKL 189

[Close]

BLAST of Carg11762 vs. TAIR10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 38/128 (29.69%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 66  LTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMAD 125
           +++IV ++V+NPN  +F++S+ T  + Y+G  V EA    G+     T +MN+T+ +M D
Sbjct: 94  ISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLD 153

Query: 126 RLLAKSELLSDV-LAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQ 185
           R+L+   L  ++  +G + + ++ R+ GKV ++G+ K  V    +C + ++I  + ++D 
Sbjct: 154 RILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDV 213

Query: 186 RCKYRTKL 193
            CK +  L
Sbjct: 214 DCKKKIDL 221

[Close]

BLAST of Carg11762 vs. TrEMBL
Match: tr|A0A0A0KBX8|A0A0A0KBX8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 85/131 (64.89%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 62  VDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLT 121
           V   L+L V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT
Sbjct: 61  VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT 120

Query: 122 MMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNV 181
           +M DR+L KSE+ SDV++G+LPISTFARLPGKV V+ V KI VVA +SCDL ID++  + 
Sbjct: 121 IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF 180

Query: 182 EDQRCKYRTKL 193
            DQ C+YRT L
Sbjct: 181 GDQLCQYRTTL 191

[Close]

BLAST of Carg11762 vs. TrEMBL
Match: tr|A0A1S3CNL0|A0A1S3CNL0_CUCME (uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.0e-35
Identity = 80/131 (61.07%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 62  VDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLT 121
           VD  L++ V LTVENPNKVAF++S  TAVV YRGE+V EAPIP GRL   GT+KMNLTLT
Sbjct: 60  VDLNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLT 119

Query: 122 MMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNV 181
           +M +R+L +SE+ SDV++G+L IST ARL GKV V+GV KI VVA +SCDL ID++  + 
Sbjct: 120 IMGERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSF 179

Query: 182 EDQRCKYRTKL 193
            DQ C++RT++
Sbjct: 180 GDQLCQFRTRV 190

[Close]

BLAST of Carg11762 vs. TrEMBL
Match: tr|A0A151SYG2|A0A151SYG2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_015274 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 68/135 (50.37%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 58  ARFRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMN 117
           A+ +VD  +TL V ++V+NPNKV F+ SD  A ++YRG+++ E P+P+G +S+D T++ N
Sbjct: 58  AKLKVDLNVTLGVDISVKNPNKVGFKFSDSVANLNYRGQQIGEVPVPAGEISSDATKEFN 117

Query: 118 LTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIR 177
           L+LT+MADRLL+ S+L SDV +G LP++TF ++ GKV ++G  K+ VV+ +SCD  +DI 
Sbjct: 118 LSLTIMADRLLSDSQLYSDVTSGTLPLNTFVKISGKVRILGFIKVHVVSSTSCDFAVDIS 177

Query: 178 KRNVEDQRCKYRTKL 193
            R VE+Q CKY+TKL
Sbjct: 178 TRAVENQECKYKTKL 192

[Close]

BLAST of Carg11762 vs. TrEMBL
Match: tr|W9SMP2|W9SMP2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022768 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32
Identity = 69/135 (51.11%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 58  ARFRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMN 117
           AR  +D  +T+ V L+V+NPNKV F++ + T+V+SYRGE+V EA IP G +SA  T  MN
Sbjct: 88  ARLGIDLNVTVGVDLSVKNPNKVDFRYGNTTSVLSYRGEQVGEAAIPGGEISAGETVPMN 147

Query: 118 LTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIR 177
           +TLT+MADRLL++S++ SD LAG++P +++ R+ G+V ++G+FKI VV+++SC+  +D+ 
Sbjct: 148 VTLTVMADRLLSRSQVYSDFLAGDVPFNSYTRIAGRVTILGIFKIHVVSVTSCEFAVDVS 207

Query: 178 KRNVEDQRCKYRTKL 193
            R V DQRC Y+TKL
Sbjct: 208 NRTVSDQRCTYKTKL 222

[Close]

BLAST of Carg11762 vs. TrEMBL
Match: tr|A0A2P5ACQ8|A0A2P5ACQ8_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_353600 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.0e-32
Identity = 68/134 (50.75%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 59  RFRVDXXLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNL 118
           R RVD  +TL V L+++NPNKV+F++ + +AV+ YRG++V +  IP G +SAD T+++N+
Sbjct: 82  RLRVDLNVTLDVDLSIKNPNKVSFKYRNSSAVLIYRGDQVGDVAIPGGEISADETKRVNV 141

Query: 119 TLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRK 178
           TLT+MADRLL++S++ SDV AG LP+ST  R+ G+V ++G+FKI VV+ + CD T+++  
Sbjct: 142 TLTLMADRLLSQSQVYSDVFAGALPLSTHTRVSGRVTILGIFKIHVVSTTWCDFTVNVSN 201

Query: 179 RNVEDQRCKYRTKL 193
           R+V DQ C Y+TKL
Sbjct: 202 RSVSDQSCTYKTKL 215

The following BLAST results are available for this feature:

BLAST of Carg11762 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948127.1	4.4e-67	100.00	uncharacterized protein LOC111451800 [Cucurbita moschata]	[more]
XP_023534551.1	8.1e-61	78.13	uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo]	[more]
XP_023007254.1	1.1e-60	81.25	uncharacterized protein LOC111499794 [Cucurbita maxima]	[more]
XP_023512272.1	5.4e-41	69.70	uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo]	[more]
XP_022944105.1	1.2e-40	69.70	uncharacterized protein LOC111448649 [Cucurbita moschata]	[more]

BLAST of Carg11762 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54200.1	5.1e-33	50.39	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G05975.1	4.8e-15	32.09	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	2.2e-12	29.69	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of Carg11762 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11762 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBX8\|A0A0A0KBX8_CUCSA	6.3e-38	64.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 SV=1	[more]
tr\|A0A1S3CNL0\|A0A1S3CNL0_CUCME	5.0e-35	61.07	uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=...	[more]
tr\|A0A151SYG2\|A0A151SYG2_CAJCA	1.4e-32	50.37	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_015274 PE=4 SV=1	[more]
tr\|W9SMP2\|W9SMP2_9ROSA	1.8e-32	51.11	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022768 PE=4 SV=1	[more]
tr\|A0A2P5ACQ8\|A0A2P5ACQ8_9ROSA	4.0e-32	50.75	Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11762-RA	Carg11762-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 72..163 e-value: 1.0E-9 score: 38.7
None	No IPR available	PANTHER	PTHR31852:SF43	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 5..191
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 5..191
None	No IPR available	SUPERFAMILY	SSF117070	LEA14-like	coord: 20..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11762	Cla013411	Watermelon (97103) v1	carwmB1057
Carg11762	Csa6G212910	Cucumber (Chinese Long) v2	carcuB1075
Carg11762	MELO3C026872	Melon (DHL92) v3.5.1	carmeB1029
Carg11762	ClCG02G019140	Watermelon (Charleston Gray)	carwcgB1027
Carg11762	CSPI06G15050	Wild cucumber (PI 183967)	carcpiB1098
Carg11762	CmaCh02G007070	Cucurbita maxima (Rimu)	carcmaB1466
Carg11762	CmoCh20G003410	Cucurbita moschata (Rifu)	carcmoB1416
Carg11762	Lsi10G014760	Bottle gourd (USVL1VR-Ls)	carlsiB966
Carg11762	Cp4.1LG05g09910	Cucurbita pepo (Zucchini)	carcpeB1476
Carg11762	Cp4.1LG16g06730	Cucurbita pepo (Zucchini)	carcpeB1473
Carg11762	MELO3C026872.2	Melon (DHL92) v3.6.1	carmedB1043
Carg11762	CsaV3_6G019050	Cucumber (Chinese Long) v3	carcucB1109
Carg11762	Cla97C02G045060	Watermelon (97103) v2	carwmbB1114
Carg11762	Bhi10G000679	Wax gourd	carwgoB1246

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11762	Carg03389	Silver-seed gourd	carcarB369

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11762	Melon (DHL92) v3.6.1	carmedB1036
Carg11762	Cucurbita maxima (Rimu)	carcmaB1461
Carg11762	Cucurbita moschata (Rifu)	carcmoB1422