Lsi10G001730 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G001730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Maternal effect embryo arrest protein
Location	chr10 : 2784113 .. 2786865 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGGACGACCTCATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTATTCGTCGATTTTTTTTTTTACATTTTTTTGTACTCGTGATCTGGGTTTGAACATTTGAGGAATCTTTATAGGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGGTTTCTCCTTTTCTTTCTTTTTCTTTAGGAACTTCTTTTTTGGGTGTTTAATGAGAATGATTGTTTGTTTTAAGTTTAAATTAGGTTGTATCTATAATCTTTGTGTCAAATGTTGATGAGGTTTAAAGGTTTAAAACAAAAAATGTTTCTCTAAACTACATTGTGCTGAATAATTTGGTAGATTTTAGAAAATGTCAGAATTAATGAACACAAAATTGAAAATCTATACAAACATATTAAAGTTTTTTAAATTTTATTGACTTAGTCGATACAAAAATTTAAAATATAAAGAGTTAAAGAATTTAACAGACAAATCCAAAAGTTTTATATATCTTCCAACAACCATTTGGTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTGCAAATTCTAGATGTTTTCTCACAAGTTTTTTTACGTTCTTACATAAACATATAAGGTGTGTGGAGAATACATTTTCAAGTGTTTAATTTAAAAAACAAGTCATGTTGAAAAAATTTAGAGTGTTTGGCAACCACTCAAAATAGTTTTTGAAGTGTATTTTAAATAGTTTTTGTCAAAAGAGTTTAAATAAAAAATAAATTTTTTGAAAAATATTTTATTCTCTAGTCAATCCAAACGGGCATTTAAGCTCTCACTCAAATTCTAAAAACAATTTTTTTTTTTTTTTTTTTTAAACTATGAACCTTTAGAAAAGAATTTTGTTTTTAGTTTTTAGTTTTTGAAATTCATGTTTTTTTTTTTCTTTCTAAATTCCATACTATAGTTCTCATATTTCTCAACTTAAATTTTTAGTCAAATTCCAAGAGAAAAGAAAAGAATTTGAATACTATTTTTAATTTTTAAAATTTCGCTTGTTTTTTTAAAAATATCAGACAAAGAAATTGATTTATGAAAGTAGTGTTTACTATTTATAAGCTTAATTTTCAAAAACAAAAAATCTTAGCCTAAATTTTTATTTTTTAGTTCTTAAAACTTAGCTGGTAAAAGGATTCAAATATTTGTAAGTGAAAGTAGTGTTTATATGGTCAAATGTTCCAAAACTATATAGTTATCAAATGAAACCTTAATGACAATATTTGTGAGTTAATCCTTTGTTATTATCATTGATTTTGGTGATGATTTTGGAGGGAGCAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAACCATGGAGAAATGAAACAATGTGGCTAGCGATTCTGTAAACTCTTGATATACAAAACGAGGATTTGAACTCGTTTTCGGACTTTGATGTTCGACGATAGTTTGTAGCCACAATCTGGCTGTATTGCTATCATGAACTGAATTAGCATTGGTAGTTCAATTTTAACTGGATTTCATATTGAAATCTACATTCAAACCAAAAAATTGGACTACTTTTAATGTTTGGTAAAGGTGTCTGTCTGTACGCTAATTTGCTTGTGAAAGTCATAATGAAAATAAAACTTCATTGGGTTTTTGGCGT

mRNA sequence

TTGTGGACGACCTCATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAACCATGGAGAAATGAAACAATGTGGCTAGCGATTCTGTAAACTCTTGATATACAAAACGAGGATTTGAACTCGTTTTCGGACTTTGATGTTCGACGATAGTTTGTAGCCACAATCTGGCTGTATTGCTATCATGAACTGAATTAGCATTGGTAGTTCAATTTTAACTGGATTTCATATTGAAATCTACATTCAAACCAAAAAATTGGACTACTTTTAATGTTTGGTAAAGGTGTCTGTCTGTACGCTAATTTGCTTGTGAAAGTCATAATGAAAATAAAACTTCATTGGGTTTTTGGCGT

Coding sequence (CDS)

ATGACATCTAAAATGAAAGCCCACTTTCAAACTTTCAACGCCCATGGTTTCCGGGTCGGTCTATCTCCCCTCTCTTCTATAGTATTTAAACCACCGCCACACCAAAATAAATCCCAGACCCGAACCATCACCATGGCGGCGCGGCGGTGCACGGCGATCAAGCCCAGCCGGAGCGACGTCGTGTTGGCCGAAGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCCCCCAAGCGGCCGATCAAACCGAGCCGAAGCGAATCCGATTCCTTGACTCAAAACCCATCTGGAATCAACTCGGAAGAGACTATTCCCGAGCTCGATAAGCTCCGAAATCTGCAGTCACAATCTGATGTTTTACGCTTGGGAGTTGAAGATTCGTTGGTGCAGGAGGAGTATGTGGAGACAGAGTATTACAAGGAGTTGGGTTCGATTGAAAAACGCCATCATAAGATAGGGAGTGGGTTCATACAGGTAGGGAATGAAGGAGGAGAAAATGGAGTTCATATTCAGAATAATGAAACTGAGTTTATTGATGTTGCAAATGGGAGGGTTCATCTTCATGGTGGCTACAAAGGCAATCCTGCAACTAATGACTGGCTCCCTAAATTTGATGATCGTGATTTAATCTTCAGATCCCAAAAGCCCAGTCGAAGCGAAGGTTCCTTGTTCTAA

Protein sequence

MTSKMKAHFQTFNAHGFRVGLSPLSSIVFKPPPHQNKSQTRTITMAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEGGENGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEGSLF

Homology

[Close]

BLAST of Lsi10G001730 vs. TrEMBL
Match: A0A0A0LN14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425770 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.9e-78
Identity = 154/185 (83.24%), Postives = 160/185 (86.49%), Query Frame = 1


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSDVVL  EEQMRITD IRAQFDSIAPKRP+KPSRSESD LTQ PSG 
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSESDPLTQYPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            S++ IPELDKLRNLQS+S   RLGV D LVQE+YVETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH Q    EFI DVANGRVHLHGGYKGNPATNDWLPKFDDR  IFRSQKP+
Sbjct: 121 VGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. TrEMBL
Match: I3SQV9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.0e-42
Identity = 103/181 (56.91%), Postives = 124/181 (68.51%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNP--SGINSEE 110
           TA KPSRSD VL  EEQ+RI +QIRAQFD+ +PKRPIKP+RSE D   QNP  S   S++
Sbjct: 6   TATKPSRSDEVLDSEEQLRIANQIRAQFDAFSPKRPIKPNRSEPDPFAQNPVDSSTLSDQ 65

Query: 111 TIPELDKLRNLQSQSDVLRLGVEDSL-VQEEYVETEYYKELGSIEKRHHKIGSGFIQVGN 170
            IPEL K ++LQSQS+ + L  E  +  Q+E+VET+YYKEL SI+K HH  GSGFI+   
Sbjct: 66  DIPELHKFQSLQSQSEAI-LSTEGIIDAQDEFVETQYYKELTSIDKTHHTTGSGFIKAVT 125

Query: 171 EGGENGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEG 229
           EGGE G  I NN      VA G      GYKGNPATNDW+P  DD +L F S KP+RSE 
Sbjct: 126 EGGEGGYEIANN-----GVAAGETRFR-GYKGNPATNDWVPNCDDDNLDFVSSKPNRSES 179

[Close]

BLAST of Lsi10G001730 vs. TrEMBL
Match: W9QYM1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009299 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 102/179 (56.98%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESD-SLTQNPSGINSEET 110
           TA KPSRSD VL  ++Q++IT QIRAQFDS+APKRP KP+RSE D SL+ +P     ++T
Sbjct: 6   TATKPSRSDEVLDSDQQLKITSQIRAQFDSMAPKRPTKPNRSEPDLSLSPSPVETTIDQT 65

Query: 111 IPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEG 170
           IPELDKLR+LQ+QS V+     D+ V EE+VET+YY+EL SI+K+HH  GSGFI+V  EG
Sbjct: 66  IPELDKLRSLQAQSQVVISDEGDTTVTEEFVETQYYRELDSIDKQHHTTGSGFIKVVKEG 125

Query: 171 GENGVH--IQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSE 227
            E G    IQ  E  F  V        GGY+ NPATNDW+PK D+ D IF S KP+RSE
Sbjct: 126 SEEGDDQVIQLREGHFGGVGTAP----GGYRSNPATNDWVPKIDE-DQIFISSKPNRSE 179

[Close]

BLAST of Lsi10G001730 vs. TrEMBL
Match: A0A0D2TZ94_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079000 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 94/178 (52.81%), Postives = 122/178 (68.54%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETI 110
           TA KPSRSD VL  ++Q RIT+Q+RAQF S+ PKRP KP+RSE D  + NP   + ++ I
Sbjct: 6   TATKPSRSDEVLDSDQQQRITNQVRAQFYSMVPKRPTKPNRSEPDLTSSNPPS-DVDQNI 65

Query: 111 PELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEGG 170
           PELDKLR+LQSQS V       ++ QEE+VET+YY+E+ SI+K+HH  GSGFI+V  EGG
Sbjct: 66  PELDKLRSLQSQSQVKISEGGATVEQEEFVETQYYREMNSIDKQHHTTGSGFIRVMKEGG 125

Query: 171 E-NGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEG 228
           E NG  IQ    +  D  +  +     +K NPATNDW+P  +D D +F S KP+RSEG
Sbjct: 126 EGNGYDIQLESGQ--DAISKPI-----FKSNPATNDWIPTLED-DQVFVSSKPNRSEG 174

[Close]

BLAST of Lsi10G001730 vs. TrEMBL
Match: U5G881_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10420g PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.6e-36
Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINS--EE 110
           T  KPSRSD VL   +Q++IT+QIRAQFDS+ PKRP KPSRSESD+ T   S ++   ++
Sbjct: 6   TMTKPSRSDEVLDANQQLQITNQIRAQFDSMVPKRPSKPSRSESDTTTTPTSSLSEIEQD 65

Query: 111 TIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQV--G 170
            IPELDKLR+LQSQS VL      ++VQ+E+VET+YY EL SI+K+HH  GSGFI V  G
Sbjct: 66  NIPELDKLRSLQSQSPVLFSAEGANMVQDEFVETQYYTELDSIDKQHHTTGSGFINVVRG 125

Query: 171 NEGGENGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSE 227
            E  +NG  IQ +       A G+  L   ++ NPATNDW P  +D D +F S KP+RSE
Sbjct: 126 EEHEKNGYGIQLSSA----AAGGK--LVSCFRSNPATNDWTPSPED-DQVFVSSKPNRSE 178

[Close]

BLAST of Lsi10G001730 vs. TAIR10
Match: AT4G37300.1 (AT4G37300.1 maternal effect embryo arrest 59)

HSP 1 Score: 121.7 bits (304), Expect = 5.9e-28
Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGINSEETI 110
           + +KPSRSD +   E+Q++  +QIRA FDS+APKRP KP+RSE       P   ++ + I
Sbjct: 2   STMKPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGF----PGSFSASDKI 61

Query: 111 ---PELDKLRNLQSQSDVLRLGVED-SLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVG 170
              PE DK ++LQSQ+    LG  D S VQ+E++ETEYY  L +I+K+HH  GSGFI V 
Sbjct: 62  TDHPEADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVV 121

Query: 171 NEGGENGVHIQNNETEFIDVAN-GRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRS 229
            E  +NG      E+E +  A  G       Y+ NPATN+W+P  ++      S KP+RS
Sbjct: 122 KE--DNG-----EESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRS 173

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: gi|659111599|ref|XP_008455813.1| (PREDICTED: uncharacterized protein LOC103495913 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.8e-80
Identity = 157/185 (84.86%), Postives = 164/185 (88.65%), Query Frame = 1


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSD+VL  EEQMRITDQIRAQFDSIAPKRP+KPSRSESDSLT+NPSG 
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESDSLTENPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            SE+ IPELDK RNLQSQS  LRLG  D LVQE+Y+ETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH QN   EFI DVANGRVH HGGYKGNPATNDWLPKFDDRDLIFRSQKP+
Sbjct: 121 VGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: gi|449468315|ref|XP_004151867.1| (PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 9.9e-78
Identity = 154/185 (83.24%), Postives = 160/185 (86.49%), Query Frame = 1


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSDVVL  EEQMRITD IRAQFDSIAPKRP+KPSRSESD LTQ PSG 
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSESDPLTQYPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQ 164
            S++ IPELDKLRNLQS+S   RLGV D LVQE+YVETEYYKEL SIEKRHHK GSGFIQ
Sbjct: 61  TSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGFIQ 120

Query: 165 VGNEGGENGVHIQNNETEFI-DVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPS 224
           VGNEGGENGVH Q    EFI DVANGRVHLHGGYKGNPATNDWLPKFDDR  IFRSQKP+
Sbjct: 121 VGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQKPN 180

Query: 225 RSEGS 229
           RSEGS
Sbjct: 181 RSEGS 185

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: gi|388509170|gb|AFK42651.1| (unknown [Lotus japonicus])

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 103/181 (56.91%), Postives = 124/181 (68.51%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNP--SGINSEE 110
           TA KPSRSD VL  EEQ+RI +QIRAQFD+ +PKRPIKP+RSE D   QNP  S   S++
Sbjct: 6   TATKPSRSDEVLDSEEQLRIANQIRAQFDAFSPKRPIKPNRSEPDPFAQNPVDSSTLSDQ 65

Query: 111 TIPELDKLRNLQSQSDVLRLGVEDSL-VQEEYVETEYYKELGSIEKRHHKIGSGFIQVGN 170
            IPEL K ++LQSQS+ + L  E  +  Q+E+VET+YYKEL SI+K HH  GSGFI+   
Sbjct: 66  DIPELHKFQSLQSQSEAI-LSTEGIIDAQDEFVETQYYKELTSIDKTHHTTGSGFIKAVT 125

Query: 171 EGGENGVHIQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSEG 229
           EGGE G  I NN      VA G      GYKGNPATNDW+P  DD +L F S KP+RSE 
Sbjct: 126 EGGEGGYEIANN-----GVAAGETRFR-GYKGNPATNDWVPNCDDDNLDFVSSKPNRSES 179

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: gi|703094673|ref|XP_010095330.1| (hypothetical protein L484_009299 [Morus notabilis])

HSP 1 Score: 176.8 bits (447), Expect = 4.4e-41
Identity = 102/179 (56.98%), Postives = 126/179 (70.39%), Query Frame = 1


Query: 51  TAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESD-SLTQNPSGINSEET 110
           TA KPSRSD VL  ++Q++IT QIRAQFDS+APKRP KP+RSE D SL+ +P     ++T
Sbjct: 6   TATKPSRSDEVLDSDQQLKITSQIRAQFDSMAPKRPTKPNRSEPDLSLSPSPVETTIDQT 65

Query: 111 IPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHKIGSGFIQVGNEG 170
           IPELDKLR+LQ+QS V+     D+ V EE+VET+YY+EL SI+K+HH  GSGFI+V  EG
Sbjct: 66  IPELDKLRSLQAQSQVVISDEGDTTVTEEFVETQYYRELDSIDKQHHTTGSGFIKVVKEG 125

Query: 171 GENGVH--IQNNETEFIDVANGRVHLHGGYKGNPATNDWLPKFDDRDLIFRSQKPSRSE 227
            E G    IQ  E  F  V        GGY+ NPATNDW+PK D+ D IF S KP+RSE
Sbjct: 126 SEEGDDQVIQLREGHFGGVGTAP----GGYRSNPATNDWVPKIDE-DQIFISSKPNRSE 179

[Close]

BLAST of Lsi10G001730 vs. NCBI nr
Match: gi|778673632|ref|XP_011650032.1| (PREDICTED: uncharacterized protein LOC101210723 isoform X2 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 3.7e-40
Identity = 92/113 (81.42%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 45  MAARRCTAIKPSRSDVVLAEEEQMRITDQIRAQFDSIAPKRPIKPSRSESDSLTQNPSGI 104
           MAA RCTA KPSRSDVVL  EEQMRITD IRAQFDSIAPKRP+KPSRSESD LTQ PSG 
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSESDPLTQYPSGF 60

Query: 105 NSEETIPELDKLRNLQSQSDVLRLGVEDSLVQEEYVETEYYKELGSIEKRHHK 158
            S++ IPELDKLRNLQS+S   RLGV D LVQE+YVETEYYKEL SIEKRHHK
Sbjct: 61  TSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHK 113

The following BLAST results are available for this feature:

BLAST of Lsi10G001730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G001730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN14_CUCSA	6.9e-78	83.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425770 PE=4 SV=1	[more]
I3SQV9_LOTJA	8.0e-42	56.91	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
W9QYM1_9ROSA	3.0e-41	56.98	Uncharacterized protein OS=Morus notabilis GN=L484_009299 PE=4 SV=1	[more]
A0A0D2TZ94_GOSRA	1.0e-36	52.81	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079000 PE=4 SV=1	[more]
U5G881_POPTR	6.6e-36	53.33	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10420g PE=4 SV=1	[more]

BLAST of Lsi10G001730 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37300.1	5.9e-28	43.72	maternal effect embryo arrest 59	[more]

BLAST of Lsi10G001730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111599\|ref\|XP_008455813.1\|	2.8e-80	84.86	PREDICTED: uncharacterized protein LOC103495913 [Cucumis melo]	[more]
gi\|449468315\|ref\|XP_004151867.1\|	9.9e-78	83.24	PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus]	[more]
gi\|388509170\|gb\|AFK42651.1\|	1.1e-41	56.91	unknown [Lotus japonicus]	[more]
gi\|703094673\|ref\|XP_010095330.1\|	4.4e-41	56.98	hypothetical protein L484_009299 [Morus notabilis]	[more]
gi\|778673632\|ref\|XP_011650032.1\|	3.7e-40	81.42	PREDICTED: uncharacterized protein LOC101210723 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G001730.1	Lsi10G001730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34686	FAMILY NOT NAMED	coord: 47..228 score: 1.6
None	No IPR available	PANTHER	PTHR34686:SF3	SUBFAMILY NOT NAMED	coord: 47..228 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G001730	Csa2G425770	Cucumber (Chinese Long) v2	culsiB094
Lsi10G001730	CSPI02G26910	Wild cucumber (PI 183967)	cpilsiB092
Lsi10G001730	Cucsa.073080	Cucumber (Gy14) v1	cgylsiB071
Lsi10G001730	CmaCh20G009740	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G001730	CmoCh20G009840	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G001730	Cla006750	Watermelon (97103) v1	lsiwmB068
Lsi10G001730	MELO3C019205	Melon (DHL92) v3.5.1	lsimeB053
Lsi10G001730	ClCG02G008200	Watermelon (Charleston Gray)	lsiwcgB055
Lsi10G001730	MELO3C019205.2	Melon (DHL92) v3.6.1	lsimedB054
Lsi10G001730	Cla97C02G034840	Watermelon (97103) v2	lsiwmbB054
Lsi10G001730	Bhi10G001183	Wax gourd	lsiwgoB085
Lsi10G001730	Cp4.1LG16g01470	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G001730	CsGy2G026370	Cucumber (Gy14) v2	cgyblsiB087
Lsi10G001730	Carg25493	Silver-seed gourd	carlsiB870
Lsi10G001730	CsaV3_2G035470	Cucumber (Chinese Long) v3	cuclsiB105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G001730	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G001730	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G001730	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G001730	Silver-seed gourd	carlsiB374
Lsi10G001730	Cucumber (Chinese Long) v3	cuclsiB449
Lsi10G001730	Wax gourd	lsiwgoB069