CmoCh20G009840 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G009840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Maternal effect embryo arrest protein
Location	Cmo_Chr20 : 5599138 .. 5602126 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCGCCAAAACCTACAAATCAACGACAAAAGCCACAGATCAAGGAACTACCAAACAAAAGGAGGCCAGAACCACCATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTATTCATCGATTCTTTACATTAATTTTTTTTCCTCTGTAAATTTTGGGAGAATAGTGATCTGGGTATGAAATTTTGAGGAATGTTTACAGGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGGTTAATCTTCCTTGGTTGTTTGTTTGTTTTGAGTTTAAATTACAAAAAGAACTCTCTGATTTTGGTGATGAAATTTGGGAGGGAGCAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAGCTCTAACAATGCATAAATGAAATGATATGGCTATCGATTCTGTAAGCTCTGGACATATATATGAGCATTTAGAAACTGTATTTCGAATTCGATTTTGAGCTTTGATTTGATGATCGAGAATAAAAGGTAGCCTCAGTTGTATGGTTGTATAGAGATCAAAGGAAAACACAACGGCTTAAATAACATATAACTTTTCAAGTAGAGAGAATTTGACAGCGTGGATCTCCCTCTAATACATTTGAGGCGCTGACAAGCCTAGACTTGATTTGGCTAAGCGATCCTACAAAATCAGAGGAAGCGTTGACAACCAGTCACACTCTTGTGGTCATTTTGGGCGATTCAAGCCGAAGAGATCTATACAAACAGAAAATAAGACAATACAATACAACATGGGCATGCAGTCACGAGCAAACACGTCCTGAACTAGTATGACCGTGATACGTGACCGTGATACGTAGCATACATCAAGAGGAAGGGTGGAAGCAAACGTTGGTGAAATTTAGTCCAAACCATTTGATAGAACTTTATCCATAATTGGGAGAGCTCTACACATGGTTTCCAGAGGCTGAACTTTTTGAATGGTGATACCTCCACCTTCAGTCATGTCTACCTTTTCATATCCAACATTCTTCCACTCATAACACTGAATCAATAGCCCCAAACTCAATCCTATCAACCTTAGCGCCATAGTTTCCCCAGGACAAGCCCTCCTTCCCATCCCAAAAGGAATTAACTTGTTCCACAGCAACTCATTCCCTTCCCCTAAGAATCTCTCAGGTCGGAAGCTCATGGGGTCATCCCACAGCTTGGGGTCTCTGTGAATTGCCCAAGCATTGACCAACAACATCGTCCCACGAGGAACATCGTAGCCTGCGACGGTGCAGTCATTGGAGGAATAGTGTGTGAGGAGCATTGGCGCTGCAGGGTGCAACCGGAAGGTCTCAGAAATAATGGCTTGAAGGTAGTGGAGGTTAGCGAGATCTGCTTCATCAATGAGTCGATCTCGACCGATCTTGGTGTCAATCTCGGCTTTGGCTTTGGATATCACCTCCGGATTGTTGAGTAATTGAGTCATTGCCCATTCCATGGTCACAGAGGTCGAGTCAGCTCCGGCACGCAGCAAAACCAGAATGACCCCTTTGATGATCTCATCGGAGTAATATTCCGGCTCAGATGCCTGAAGTTCCAGAAGCCGATCAAGCAGAGTACTCTGTTTTTCTATTTGCAATCCTGTCTGATTCCGGCGATCTTCAACCAATTTCTGCATAAATTTATCGGCCCTTTTCGTTAATTTGGCTAAACTCTTCTCATATTCACCAAACCCAATCCATTTCAAAATCGGCATGAAATCGACCCAATTCGACGCTCCTCCATGACGCGATGTTTCATCCATAAGCTCTCTGAACTCCCTCGCCTCTGTTTCATTGGAAACCTCCTCGCCGAAGTACCGTTTTCCGGTCACAACCCTCATCACAACGTTGAAACTCAATTCTGAAAACATCGATTTCAACTCCACTTTAGCAAACGATTCGGAATGGAGTTTGACCAATAATCGCCGGATTTCATCCTTACGGATGCTGAGAGCTGCGTTGAGACGCGCCGTGGAAAATATCTCCATAGAGGTGAGACGACGGAGGTTCCGCCAGTGGTCGCCGAAAGGTGTGGTGGAGATGGTGGTGAAGTTGTAGCCGAGGTATTTTCCGATGAGTAAACGCGGACGGTTGGCGAAAACGACATCGTTTTTGGTGAAGCATTCTTCGGCTAGTTGGAGTGAAGAGACTATGAGGGCAAGGCGAGATCCGAATCGGAGAGTGAAAATGGGTCCGTATTTGGCGGCGATGTTGTGGAAGTTCCGGTGGATTGGGCGTTGAAGGAGGTGGAGATGGCCGATGATCGGGAAAGACGGTGGGCTCGGCGGGAGATTTCGCCGGCGGGTAATGAATTGTTGCAGGAAAAGGAAAACAAGAAGGAGGAGCAGCAAAACAAAGAGAAAATCCATTAGGTTTGTTTGATGATTTCAATGGAAACATTTACACGTTTGATTGATATTATATGCTGTTCCTTTTGCATACATGTGGGTACCACTCCACCCCTTATCTATGCCCAAAATTATTGGTCTAGGGGATAAGATATTTTCCGGAACAAGCAAATCATAATGTATCTTTTTATTTTTGTAAAGACTAA

mRNA sequence

CCACCGCCAAAACCTACAAATCAACGACAAAAGCCACAGATCAAGGAACTACCAAACAAAAGGAGGCCAGAACCACCATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAGCTCTAACAATGCATAAATGAAATGATATGGCTATCGATTCTGTAAGCTCTGGACATATATATGAGCATTTAGAAACTGTATTTCGAATTCGATTTTGAGCTTTGATTTGATGATCGAGAATAAAAGGTAGCCTCAGTTGTATGGTTGTATAGAGATCAAAGGAAAACACAACGGCTTAAATAACATATAACTTTTCAAGTAGAGAGAATTTGACAGCGTGGATCTCCCTCTAATACATTTGAGGCGCTGACAAGCCTAGACTTGATTTGGCTAAGCGATCCTACAAAATCAGAGGAAGCGTTGACAACCAGTCACACTCTTGTGGTCATTTTGGGCGATTCAAGCCGAAGAGATCTATACAAACAGAAAATAAGACAATACAATACAACATGGGCATGCAGTCACGAGCAAACACGTCCTGAACTAGTATGACCGTGATACGTGACCGTGATACGTAGCATACATCAAGAGGAAGGGTGGAAGCAAACGTTGGTGAAATTTAGTCCAAACCATTTGATAGAACTTTATCCATAATTGGGAGAGCTCTACACATGGTTTCCAGAGGCTGAACTTTTTGAATGGTGATACCTCCACCTTCAGTCATGTCTACCTTTTCATATCCAACATTCTTCCACTCATAACACTGAATCAATAGCCCCAAACTCAATCCTATCAACCTTAGCGCCATAGTTTCCCCAGGACAAGCCCTCCTTCCCATCCCAAAAGGAATTAACTTGTTCCACAGCAACTCATTCCCTTCCCCTAAGAATCTCTCAGGTCGGAAGCTCATGGGGTCATCCCACAGCTTGGGGTCTCTGTGAATTGCCCAAGCATTGACCAACAACATCGTCCCACGAGGAACATCGTAGCCTGCGACGGTGCAGTCATTGGAGGAATAGTGTGTGAGGAGCATTGGCGCTGCAGGGTGCAACCGGAAGGTCTCAGAAATAATGGCTTGAAGGTAGTGGAGGTTAGCGAGATCTGCTTCATCAATGAGTCGATCTCGACCGATCTTGGTGTCAATCTCGGCTTTGGCTTTGGATATCACCTCCGGATTGTTGAGTAATTGAGTCATTGCCCATTCCATGGTCACAGAGGTCGAGTCAGCTCCGGCACGCAGCAAAACCAGAATGACCCCTTTGATGATCTCATCGGAGTAATATTCCGGCTCAGATGCCTGAAGTTCCAGAAGCCGATCAAGCAGAGTACTCTGTTTTTCTATTTGCAATCCTGTCTGATTCCGGCGATCTTCAACCAATTTCTGCATAAATTTATCGGCCCTTTTCGTTAATTTGGCTAAACTCTTCTCATATTCACCAAACCCAATCCATTTCAAAATCGGCATGAAATCGACCCAATTCGACGCTCCTCCATGACGCGATGTTTCATCCATAAGCTCTCTGAACTCCCTCGCCTCTGTTTCATTGGAAACCTCCTCGCCGAAGTACCGTTTTCCGGTCACAACCCTCATCACAACGTTGAAACTCAATTCTGAAAACATCGATTTCAACTCCACTTTAGCAAACGATTCGGAATGGAGTTTGACCAATAATCGCCGGATTTCATCCTTACGGATGCTGAGAGCTGCGTTGAGACGCGCCGTGGAAAATATCTCCATAGAGGTGAGACGACGGAGGTTCCGCCAGTGGTCGCCGAAAGGTGTGGTGGAGATGGTGGTGAAGTTGTAGCCGAGGTATTTTCCGATGAGTAAACGCGGACGGTTGGCGAAAACGACATCGTTTTTGGTGAAGCATTCTTCGGCTAGTTGGAGTGAAGAGACTATGAGGGCAAGGCGAGATCCGAATCGGAGAGTGAAAATGGGTCCGTATTTGGCGGCGATGTTGTGGAAGTTCCGGTGGATTGGGCGTTGAAGGAGGTGGAGATGGCCGATGATCGGGAAAGACGGTGGGCTCGGCGGGAGATTTCGCCGGCGGGTAATGAATTGTTGCAGGAAAAGGAAAACAAGAAGGAGGAGCAGCAAAACAAAGAGAAAATCCATTAGGTTTGTTTGATGATTTCAATGGAAACATTTACACGTTTGATTGATATTATATGCTGTTCCTTTTGCATACATGTGGGTACCACTCCACCCCTTATCTATGCCCAAAATTATTGGTCTAGGGGATAAGATATTTTCCGGAACAAGCAAATCATAATGTATCTTTTTATTTTTGTAAAGACTAA

Coding sequence (CDS)

ATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAG

Homology

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BLAST of CmoCh20G009840 vs. TrEMBL
Match: A0A0A0LN14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425770 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-72
Identity = 146/186 (78.49%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSDVVLDNEEQMRITD IRAQFDSIAPKRPMKPSRSES  D  TQ PS
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSES--DPLTQYPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+++AIPELDKLRNLQ++SH   LGVGD LVQE+YVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVHLHGGYKGNPATNDW P FDDR  IF+SQK
Sbjct: 121 IQVGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

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BLAST of CmoCh20G009840 vs. TrEMBL
Match: W9QYM1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009299 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.6e-43
Identity = 102/176 (57.95%), Postives = 128/176 (72.73%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           TA KPSRSD VLD+++Q++IT QIRAQFDS+APKRP KP+RSE +  S +  P  +T ++
Sbjct: 6   TATKPSRSDEVLDSDQQLKITSQIRAQFDSMAPKRPTKPNRSEPDL-SLSPSPVETTIDQ 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKE 126
            IPELDKLR+LQ QS V+    GD+ V EE+VET+YY+ELDSI+K+HH TGSGFI+V KE
Sbjct: 66  TIPELDKLRSLQAQSQVVISDEGDTTVTEEFVETQYYRELDSIDKQHHTTGSGFIKVVKE 125

Query: 127 GG--GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 181
           G   G+    +L +   GG     GGY+ NPATNDW P  D+ D IF S KPNRSE
Sbjct: 126 GSEEGDDQVIQLREGHFGGVGTAPGGYRSNPATNDWVPKIDE-DQIFISSKPNRSE 179

[Close]

BLAST of CmoCh20G009840 vs. TrEMBL
Match: A0A061DGU2_THECC (Maternal effect embryo arrest 59, putative isoform 1 OS=Theobroma cacao GN=TCM_000711 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-41
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           T  KPSRSD VLD ++Q +IT+Q+RAQFDS+APKR  KP+RSE +  + T +      ++
Sbjct: 6   TVTKPSRSDEVLDADQQQKITNQVRAQFDSLAPKRSTKPNRSEPDLATITSN-FPPAVDQ 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKE 126
            IPELDKLR+LQ+QSH+  L  GDS+VQ+E+VET+YYKE+DSI+K HH TGSGFI+V  E
Sbjct: 66  NIPELDKLRSLQSQSHMKILQ-GDSVVQDEFVETQYYKEMDSIDKEHHTTGSGFIRVVGE 125

Query: 127 GG-GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC 183
           GG GN    +L +    G V     +K NPATNDW P  ++ D +F S KPNRSEGC
Sbjct: 126 GGAGNRYDIQLQNGQGAGNVFNRPIFKSNPATNDWMPNVEE-DQVFVSSKPNRSEGC 179

[Close]

BLAST of CmoCh20G009840 vs. TrEMBL
Match: U5G881_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10420g PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.4e-41
Identity = 98/178 (55.06%), Postives = 126/178 (70.79%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           T  KPSRSD VLD  +Q++IT+QIRAQFDS+ PKRP KPSRSES++ ++         ++
Sbjct: 6   TMTKPSRSDEVLDANQQLQITNQIRAQFDSMVPKRPSKPSRSESDTTTTPTSSLSEIEQD 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQV--G 126
            IPELDKLR+LQ+QS VL    G ++VQ+E+VET+YY ELDSI+K+HH TGSGFI V  G
Sbjct: 66  NIPELDKLRSLQSQSPVLFSAEGANMVQDEFVETQYYTELDSIDKQHHTTGSGFINVVRG 125

Query: 127 KEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC 183
           +E   N    +L  AA GG+  L   ++ NPATNDW P+ +D D +F S KPNRSE C
Sbjct: 126 EEHEKNGYGIQLSSAAAGGK--LVSCFRSNPATNDWTPSPED-DQVFVSSKPNRSESC 180

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BLAST of CmoCh20G009840 vs. TrEMBL
Match: A0A0D2TZ94_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079000 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.7e-40
Identity = 98/177 (55.37%), Postives = 125/177 (70.62%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           TA KPSRSD VLD+++Q RIT+Q+RAQF S+ PKRP KP+RSE +  SS      S  ++
Sbjct: 6   TATKPSRSDEVLDSDQQQRITNQVRAQFYSMVPKRPTKPNRSEPDLTSSNPP---SDVDQ 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKE 126
            IPELDKLR+LQ+QS V     G ++ QEE+VET+YY+E++SI+K+HH TGSGFI+V KE
Sbjct: 66  NIPELDKLRSLQSQSQVKISEGGATVEQEEFVETQYYREMNSIDKQHHTTGSGFIRVMKE 125

Query: 127 GG-GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC 183
           GG GN    +L    +G        +K NPATNDW PT +D D +F S KPNRSEGC
Sbjct: 126 GGEGNGYDIQL---ESGQDAISKPIFKSNPATNDWIPTLED-DQVFVSSKPNRSEGC 175

[Close]

BLAST of CmoCh20G009840 vs. TAIR10
Match: AT4G37300.1 (AT4G37300.1 maternal effect embryo arrest 59)

HSP 1 Score: 137.9 bits (346), Expect = 6.3e-33
Identity = 83/172 (48.26%), Postives = 106/172 (61.63%), Query Frame = 1


Query: 10  KPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEEAIP 69
           KPSRSD + D E+Q++  +QIRA FDS+APKRP KP+RSE     S    S S      P
Sbjct: 5   KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSF---SASDKITDHP 64

Query: 70  ELDKLRNLQTQSHVLALGVGD-SLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKEGG 129
           E DK ++LQ+Q+H   LG GD S VQ+E++ETEYY  L +I+K+HH TGSGFI V KE  
Sbjct: 65  EADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVKEDN 124

Query: 130 GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 181
           G    +  + AA  G       Y+ NPATN+W P  ++      S KPNRSE
Sbjct: 125 GE--ESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRSE 171

[Close]

BLAST of CmoCh20G009840 vs. NCBI nr
Match: gi|659111599|ref|XP_008455813.1| (PREDICTED: uncharacterized protein LOC103495913 [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 6.9e-74
Identity = 147/186 (79.03%), Postives = 158/186 (84.95%), Query Frame = 1


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSD+VLDNEEQMRITDQIRAQFDSIAPKRPMKPSRS  ESDS T++PS
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRS--ESDSLTENPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+E+AIPELDK RNLQ+QSH L LG GD LVQE+Y+ETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVH HGGYKGNPATNDW P FDDRDLIF+SQK
Sbjct: 121 IQVGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of CmoCh20G009840 vs. NCBI nr
Match: gi|449468315|ref|XP_004151867.1| (PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-72
Identity = 146/186 (78.49%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSDVVLDNEEQMRITD IRAQFDSIAPKRPMKPSRSES  D  TQ PS
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSES--DPLTQYPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+++AIPELDKLRNLQ++SH   LGVGD LVQE+YVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVHLHGGYKGNPATNDW P FDDR  IF+SQK
Sbjct: 121 IQVGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of CmoCh20G009840 vs. NCBI nr
Match: gi|703094673|ref|XP_010095330.1| (hypothetical protein L484_009299 [Morus notabilis])

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-43
Identity = 102/176 (57.95%), Postives = 128/176 (72.73%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           TA KPSRSD VLD+++Q++IT QIRAQFDS+APKRP KP+RSE +  S +  P  +T ++
Sbjct: 6   TATKPSRSDEVLDSDQQLKITSQIRAQFDSMAPKRPTKPNRSEPDL-SLSPSPVETTIDQ 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKE 126
            IPELDKLR+LQ QS V+    GD+ V EE+VET+YY+ELDSI+K+HH TGSGFI+V KE
Sbjct: 66  TIPELDKLRSLQAQSQVVISDEGDTTVTEEFVETQYYRELDSIDKQHHTTGSGFIKVVKE 125

Query: 127 GG--GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 181
           G   G+    +L +   GG     GGY+ NPATNDW P  D+ D IF S KPNRSE
Sbjct: 126 GSEEGDDQVIQLREGHFGGVGTAPGGYRSNPATNDWVPKIDE-DQIFISSKPNRSE 179

[Close]

BLAST of CmoCh20G009840 vs. NCBI nr
Match: gi|778673632|ref|XP_011650032.1| (PREDICTED: uncharacterized protein LOC101210723 isoform X2 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 9.1e-42
Identity = 96/115 (83.48%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSDVVLDNEEQMRITD IRAQFDSIAPKRPMKPSRSES  D  TQ PS
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSRSES--DPLTQYPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHK 116
           G T+++AIPELDKLRNLQ++SH   LGVGD LVQE+YVETEYYKELDSIEKRHHK
Sbjct: 61  GFTSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHK 113

[Close]

BLAST of CmoCh20G009840 vs. NCBI nr
Match: gi|743925701|ref|XP_011006993.1| (PREDICTED: uncharacterized protein LOC105112829 isoform X2 [Populus euphratica])

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 104/179 (58.10%), Postives = 130/179 (72.63%), Query Frame = 1


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAE- 66
           T  KPSRSD VLD  +Q++IT+QIRAQFDS+ PKRP KPSRSES++ S+T  PS S  E 
Sbjct: 6   TMTKPSRSDEVLDANQQLQITNQIRAQFDSMVPKRPSKPSRSESDT-STTPTPSLSNIEQ 65

Query: 67  EAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQV-- 126
           + IPELDKLR+LQ+QS VL    G ++VQ+E+VET+YY ELDSI+K+HH TGSGFI V  
Sbjct: 66  DNIPELDKLRSLQSQSPVLFSAEGANMVQDEFVETQYYTELDSIDKQHHTTGSGFINVVR 125

Query: 127 GKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC 183
           G+E   N    +L  AA GG+  L   +K NPATNDW P+ +D D +F S KPN+SE C
Sbjct: 126 GEEHEKNGYGIQLSSAAAGGK--LVSCFKSNPATNDWIPSPED-DQVFVSSKPNQSESC 180

The following BLAST results are available for this feature:

BLAST of CmoCh20G009840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh20G009840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN14_CUCSA	1.5e-72	78.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G425770 PE=4 SV=1	[more]
W9QYM1_9ROSA	2.6e-43	57.95	Uncharacterized protein OS=Morus notabilis GN=L484_009299 PE=4 SV=1	[more]
A0A061DGU2_THECC	2.4e-41	55.37	Maternal effect embryo arrest 59, putative isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
U5G881_POPTR	5.4e-41	55.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s10420g PE=4 SV=1	[more]
A0A0D2TZ94_GOSRA	7.7e-40	55.37	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G079000 PE=4 SV=1	[more]

BLAST of CmoCh20G009840 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37300.1	6.3e-33	48.26	maternal effect embryo arrest 59	[more]

BLAST of CmoCh20G009840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111599\|ref\|XP_008455813.1\|	6.9e-74	79.03	PREDICTED: uncharacterized protein LOC103495913 [Cucumis melo]	[more]
gi\|449468315\|ref\|XP_004151867.1\|	2.2e-72	78.49	PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus]	[more]
gi\|703094673\|ref\|XP_010095330.1\|	3.7e-43	57.95	hypothetical protein L484_009299 [Morus notabilis]	[more]
gi\|778673632\|ref\|XP_011650032.1\|	9.1e-42	83.48	PREDICTED: uncharacterized protein LOC101210723 isoform X2 [Cucumis sativus]	[more]
gi\|743925701\|ref\|XP_011006993.1\|	2.0e-41	58.10	PREDICTED: uncharacterized protein LOC105112829 isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009840.1	CmoCh20G009840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34686	FAMILY NOT NAMED	coord: 3..182 score: 1.6
None	No IPR available	PANTHER	PTHR34686:SF3	SUBFAMILY NOT NAMED	coord: 3..182 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G009840	Cucsa.073080	Cucumber (Gy14) v1	cgycmoB0111
CmoCh20G009840	CmaCh20G009740	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G009840	Cla006750	Watermelon (97103) v1	cmowmB524
CmoCh20G009840	Csa2G425770	Cucumber (Chinese Long) v2	cmocuB533
CmoCh20G009840	MELO3C019205	Melon (DHL92) v3.5.1	cmomeB483
CmoCh20G009840	ClCG02G008200	Watermelon (Charleston Gray)	cmowcgB481
CmoCh20G009840	CSPI02G26910	Wild cucumber (PI 183967)	cmocpiB538
CmoCh20G009840	Lsi10G001730	Bottle gourd (USVL1VR-Ls)	cmolsiB491
CmoCh20G009840	Cp4.1LG16g01470	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G009840	MELO3C019205.2	Melon (DHL92) v3.6.1	cmomedB561
CmoCh20G009840	CsaV3_2G035470	Cucumber (Chinese Long) v3	cmocucB0639
CmoCh20G009840	Cla97C02G034840	Watermelon (97103) v2	cmowmbB547
CmoCh20G009840	Bhi10G001183	Wax gourd	cmowgoB0684
CmoCh20G009840	CsGy2G026370	Cucumber (Gy14) v2	cgybcmoB211
CmoCh20G009840	Carg25493	Silver-seed gourd	carcmoB1277

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G009840	Cucumber (Gy14) v1	cgycmoB0222
CmoCh20G009840	Cucumber (Gy14) v1	cgycmoB1016
CmoCh20G009840	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G009840	Cucurbita maxima (Rimu)	cmacmoB649
CmoCh20G009840	Wild cucumber (PI 183967)	cmocpiB535
CmoCh20G009840	Wild cucumber (PI 183967)	cmocpiB544
CmoCh20G009840	Wild cucumber (PI 183967)	cmocpiB554
CmoCh20G009840	Cucumber (Chinese Long) v2	cmocuB529
CmoCh20G009840	Cucumber (Chinese Long) v2	cmocuB539
CmoCh20G009840	Cucumber (Chinese Long) v2	cmocuB548
CmoCh20G009840	Melon (DHL92) v3.5.1	cmomeB488
CmoCh20G009840	Melon (DHL92) v3.5.1	cmomeB510
CmoCh20G009840	Watermelon (Charleston Gray)	cmowcgB477
CmoCh20G009840	Watermelon (Charleston Gray)	cmowcgB497
CmoCh20G009840	Watermelon (Charleston Gray)	cmowcgB503
CmoCh20G009840	Watermelon (97103) v1	cmowmB510
CmoCh20G009840	Watermelon (97103) v1	cmowmB528
CmoCh20G009840	Cucurbita pepo (Zucchini)	cmocpeB534
CmoCh20G009840	Bottle gourd (USVL1VR-Ls)	cmolsiB504
CmoCh20G009840	Cucumber (Gy14) v2	cgybcmoB776
CmoCh20G009840	Melon (DHL92) v3.6.1	cmomedB586
CmoCh20G009840	Silver-seed gourd	carcmoB0550
CmoCh20G009840	Silver-seed gourd	carcmoB0555
CmoCh20G009840	Cucumber (Chinese Long) v3	cmocucB0641
CmoCh20G009840	Cucumber (Chinese Long) v3	cmocucB0655
CmoCh20G009840	Watermelon (97103) v2	cmowmbB540
CmoCh20G009840	Watermelon (97103) v2	cmowmbB563
CmoCh20G009840	Wax gourd	cmowgoB0683
CmoCh20G009840	Wax gourd	cmowgoB0690
CmoCh20G009840	Wax gourd	cmowgoB0695
CmoCh20G009840	Cucurbita moschata (Rifu)	cmocmoB404