Carg25493 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25493
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	maternal effect embryo arrest 59
Location	Cucurbita_argyrosperma_scaffold_076 : 539769 .. 540496 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTATTCATCGATTCTTTACATTAATTTTTTTTCCTCTGTAAATTTTGGGAGAATAGTGATCTGGGTATGAAATTTTGAGGAATGTTTACAGGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGGTTAATCTTCCTTGGTTGTTTGTTTGTTTTGAGTTTAAATTACAAAAAGAACTCTCTGATTTTGGTGATGAAATTTGGGAGGGAGCAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAG

mRNA sequence

ATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAG

Coding sequence (CDS)

ATGGCGGCACGGCGGTGCACAGCGAGAAAGCCGAGTCGGAGCGACGTGGTGTTGGACAACGAGGAGCAGATGCGAATCACCGATCAGATCAGAGCCCAGTTCGATTCCATCGCTCCCAAGCGGCCGATGAAACCGAGCCGAAGCGAATCTGAATCCGATTCCTCGACGCAAGACCCATCTGGAAGCACCGCAGAAGAGGCTATTCCCGAGCTCGATAAGCTCCGAAATCTCCAAACCCAATCTCATGTCTTAGCCTTGGGAGTTGGGGATTCGTTGGTGCAGGAGGAGTATGTGGAGACGGAGTATTACAAGGAGTTGGATTCGATTGAAAAGCGGCATCATAAGACGGGGAGTGGGTTCATACAAGTGGGTAAGGAAGGGGGAGGAAATGTTGTTCATACTCGGCTTATTGATGCTGCAACTGGTGGGAGGGTTCATCTTCATGGCGGCTACAAAGGCAATCCTGCAACTAATGATTGGTTTCCAACATTTGATGATCGTGATTTGATCTTCAAATCCCAGAAGCCCAATCGAAGCGAAGGTTGCTAG

Protein sequence

MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC

Homology

[Close]

BLAST of Carg25493 vs. NCBI nr
Match: XP_022944058.1 (uncharacterized protein LOC111448608 [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 3.9e-97
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS
Sbjct: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 180
           IQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE
Sbjct: 121 IQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 180

Query: 181 GC 183
           GC
Sbjct: 181 GC 182

[Close]

BLAST of Carg25493 vs. NCBI nr
Match: XP_023512644.1 (uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94
Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAARRCTA KPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQ+PS
Sbjct: 1   MAARRCTASKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQNPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 180
           IQVGKEGGGNVVHT+ IDAATGGRVHLHGGYKGNPATNDW PTFDDRDLIFKSQKPNRSE
Sbjct: 121 IQVGKEGGGNVVHTQFIDAATGGRVHLHGGYKGNPATNDWLPTFDDRDLIFKSQKPNRSE 180

Query: 181 GC 183
           GC
Sbjct: 181 GC 182

[Close]

BLAST of Carg25493 vs. NCBI nr
Match: XP_022985612.1 (uncharacterized protein LOC111483624 [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-90
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAARRCTA KPSRSDVVLD+EEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQ+ S
Sbjct: 1   MAARRCTASKPSRSDVVLDHEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQNAS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           GSTAEEAIPEL KLRNLQTQSHVLALGVGDSLVQEEYVET YYKELDSIEKRHHKTGSGF
Sbjct: 61  GSTAEEAIPELHKLRNLQTQSHVLALGVGDSLVQEEYVETAYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 180
           IQVGKEGGGNVVHT+ IDAATGGRVHLHGGYKGNPATNDW PTFDD DLIFKSQKPNRSE
Sbjct: 121 IQVGKEGGGNVVHTQFIDAATGGRVHLHGGYKGNPATNDWLPTFDDHDLIFKSQKPNRSE 180

Query: 181 GC 183
           GC
Sbjct: 181 GC 182

[Close]

BLAST of Carg25493 vs. NCBI nr
Match: XP_008455813.1 (PREDICTED: uncharacterized protein LOC103495913 isoform X1 [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 147/186 (79.03%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSD+VLDNEEQMRITDQIRAQFDSIAPKRPMKPSR  SESDS T++PS
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSR--SESDSLTENPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+E+AIPELDK RNLQ+QSH L LG GD LVQE+Y+ETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVH HGGYKGNPATNDW P FDDRDLIF+SQK
Sbjct: 121 IQVGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of Carg25493 vs. NCBI nr
Match: XP_004151867.1 (PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus] >KGN63300.1 hypothetical protein Csa_2G425770 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 4.3e-72
Identity = 146/186 (78.49%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSDVVLDNEEQMRITD IRAQFDSIAPKRPMKPSR  SESD  TQ PS
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSR--SESDPLTQYPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+++AIPELDKLRNLQ++SH   LGVGD LVQE+YVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVHLHGGYKGNPATNDW P FDDR  IF+SQK
Sbjct: 121 IQVGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of Carg25493 vs. TAIR10
Match: AT4G37300.1 (maternal effect embryo arrest 59)

HSP 1 Score: 137.9 bits (346), Expect = 6.3e-33
Identity = 83/172 (48.26%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 10  KPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEEAIP 69
           KPSRSD + D E+Q++  +QIRA FDS+APKRP KP+RSE     S    S S      P
Sbjct: 5   KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSF---SASDKITDHP 64

Query: 70  ELDKLRNLQTQSHVLALGVGD-SLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKEGG 129
           E DK ++LQ+Q+H   LG GD S VQ+E++ETEYY  L +I+K+HH TGSGFI V KE  
Sbjct: 65  EADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVKEDN 124

Query: 130 GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 181
           G    +  + AA  G       Y+ NPATN+W P  ++      S KPNRSE
Sbjct: 125 GE--ESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRSE 171

[Close]

BLAST of Carg25493 vs. TrEMBL
Match: tr|A0A1S3C2G8|A0A1S3C2G8_CUCME (uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495913 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 8.9e-74
Identity = 147/186 (79.03%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSD+VLDNEEQMRITDQIRAQFDSIAPKRPMKPSR  SESDS T++PS
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSR--SESDSLTENPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+E+AIPELDK RNLQ+QSH L LG GD LVQE+Y+ETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVH HGGYKGNPATNDW P FDDRDLIF+SQK
Sbjct: 121 IQVGNEGGENGVHNQNKPHEFINDVANGRVHHHGGYKGNPATNDWLPKFDDRDLIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of Carg25493 vs. TrEMBL
Match: tr|A0A0A0LN14|A0A0A0LN14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425770 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.9e-72
Identity = 146/186 (78.49%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSDVVLDNEEQMRITD IRAQFDSIAPKRPMKPSR  SESD  TQ PS
Sbjct: 1   MAAPRCTATKPSRSDVVLDNEEQMRITDHIRAQFDSIAPKRPMKPSR--SESDPLTQYPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGF 120
           G T+++AIPELDKLRNLQ++SH   LGVGD LVQE+YVETEYYKELDSIEKRHHKTGSGF
Sbjct: 61  GFTSKKAIPELDKLRNLQSKSHAFRLGVGDCLVQEDYVETEYYKELDSIEKRHHKTGSGF 120

Query: 121 IQVGKEGGGNVVHTR-----LIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQK 180
           IQVG EGG N VH +      I+    GRVHLHGGYKGNPATNDW P FDDR  IF+SQK
Sbjct: 121 IQVGNEGGENGVHNQKKTQEFINDVANGRVHLHGGYKGNPATNDWLPKFDDRSSIFRSQK 180

Query: 181 PNRSEG 182
           PNRSEG
Sbjct: 181 PNRSEG 184

[Close]

BLAST of Carg25493 vs. TrEMBL
Match: tr|W9QYM1|W9QYM1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009299 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 102/176 (57.95%), Postives = 128/176 (72.73%), Query Frame = 0


Query: 7   TARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSGSTAEE 66
           TA KPSRSD VLD+++Q++IT QIRAQFDS+APKRP KP+RSE +  S +  P  +T ++
Sbjct: 6   TATKPSRSDEVLDSDQQLKITSQIRAQFDSMAPKRPTKPNRSEPDL-SLSPSPVETTIDQ 65

Query: 67  AIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKE 126
            IPELDKLR+LQ QS V+    GD+ V EE+VET+YY+ELDSI+K+HH TGSGFI+V KE
Sbjct: 66  TIPELDKLRSLQAQSQVVISDEGDTTVTEEFVETQYYRELDSIDKQHHTTGSGFIKVVKE 125

Query: 127 GG--GNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSE 181
           G   G+    +L +   GG     GGY+ NPATNDW P  D+ D IF S KPNRSE
Sbjct: 126 GSEEGDDQVIQLREGHFGGVGTAPGGYRSNPATNDWVPKIDE-DQIFISSKPNRSE 179

[Close]

BLAST of Carg25493 vs. TrEMBL
Match: tr|A0A2P2ILW5|A0A2P2ILW5_RHIMU (Uncharacterized protein LOC105112829 isoform X2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 101/175 (57.71%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 10  KPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPSG--STAEEA 69
           KPSRSD VLD + Q +IT+QIRAQF+S+APKRP KPSRSES++ ++  +PSG  +  E  
Sbjct: 9   KPSRSDEVLDADAQHQITNQIRAQFESMAPKRPSKPSRSESDT-TAPPEPSGLYNVEENN 68

Query: 70  IPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHKTGSGFIQVGKEG 129
           IPELDKLR+LQ+QS V+ L  G ++VQ+E+VET+YYKELDSI+K+HH TGSGFI+V +E 
Sbjct: 69  IPELDKLRSLQSQSRVVFLDEGTNMVQDEFVETQYYKELDSIDKQHHTTGSGFIRVAREE 128

Query: 130 GGNVVHTRLIDAATGGRVHLHGGYKGNPATNDWFPTFDDRDLIFKSQKPNRSEGC 183
            G     +L  + +G    +  GYK NPATNDW P+ DD D +F S KPNRSE C
Sbjct: 129 NGYGYGVQLPISHSGAAPVMVSGYKSNPATNDWTPSPDD-DQVFVSCKPNRSESC 181

[Close]

BLAST of Carg25493 vs. TrEMBL
Match: tr|A0A1S4E0X2|A0A1S4E0X2_CUCME (uncharacterized protein LOC103495913 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495913 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   MAARRCTARKPSRSDVVLDNEEQMRITDQIRAQFDSIAPKRPMKPSRSESESDSSTQDPS 60
           MAA RCTA KPSRSD+VLDNEEQMRITDQIRAQFDSIAPKRPMKPSR  SESDS T++PS
Sbjct: 1   MAAPRCTATKPSRSDIVLDNEEQMRITDQIRAQFDSIAPKRPMKPSR--SESDSLTENPS 60

Query: 61  GSTAEEAIPELDKLRNLQTQSHVLALGVGDSLVQEEYVETEYYKELDSIEKRHHK 116
           G T+E+AIPELDK RNLQ+QSH L LG GD LVQE+Y+ETEYYKELDSIEKRHHK
Sbjct: 61  GFTSEKAIPELDKFRNLQSQSHALRLGDGDCLVQEDYLETEYYKELDSIEKRHHK 113

The following BLAST results are available for this feature:

BLAST of Carg25493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944058.1	3.9e-97	100.00	uncharacterized protein LOC111448608 [Cucurbita moschata]	[more]
XP_023512644.1	3.1e-94	97.25	uncharacterized protein LOC111777334 [Cucurbita pepo subsp. pepo]	[more]
XP_022985612.1	1.2e-90	94.51	uncharacterized protein LOC111483624 [Cucurbita maxima]	[more]
XP_008455813.1	1.3e-73	79.03	PREDICTED: uncharacterized protein LOC103495913 isoform X1 [Cucumis melo]	[more]
XP_004151867.1	4.3e-72	78.49	PREDICTED: uncharacterized protein LOC101210723 isoform X1 [Cucumis sativus] >KG...	[more]

BLAST of Carg25493 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37300.1	6.3e-33	48.26	maternal effect embryo arrest 59	[more]

BLAST of Carg25493 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25493 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2G8\|A0A1S3C2G8_CUCME	8.9e-74	79.03	uncharacterized protein LOC103495913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LN14\|A0A0A0LN14_CUCSA	2.9e-72	78.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425770 PE=4 SV=1	[more]
tr\|W9QYM1\|W9QYM1_9ROSA	4.7e-43	57.95	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009299 PE=4 SV=1	[more]
tr\|A0A2P2ILW5\|A0A2P2ILW5_RHIMU	4.7e-43	57.71	Uncharacterized protein LOC105112829 isoform X2 OS=Rhizophora mucronata OX=61149...	[more]
tr\|A0A1S4E0X2\|A0A1S4E0X2_CUCME	1.4e-42	83.48	uncharacterized protein LOC103495913 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25493-RA	Carg25493-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR34686:SF3	SUBFAMILY NOT NAMED	coord: 4..182
None	No IPR available	PANTHER	PTHR34686	FAMILY NOT NAMED	coord: 4..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25493	Cla006750	Watermelon (97103) v1	carwmB0955
Carg25493	Csa2G425770	Cucumber (Chinese Long) v2	carcuB0970
Carg25493	MELO3C019205	Melon (DHL92) v3.5.1	carmeB0935
Carg25493	ClCG02G008200	Watermelon (Charleston Gray)	carwcgB0930
Carg25493	CSPI02G26910	Wild cucumber (PI 183967)	carcpiB0991
Carg25493	Cucsa.073080	Cucumber (Gy14) v1	carcgyB1073
Carg25493	CmaCh20G009740	Cucurbita maxima (Rimu)	carcmaB1308
Carg25493	CmoCh20G009840	Cucurbita moschata (Rifu)	carcmoB1277
Carg25493	Lsi10G001730	Bottle gourd (USVL1VR-Ls)	carlsiB870
Carg25493	CsGy2G026370	Cucumber (Gy14) v2	carcgybB0942
Carg25493	CsaV3_2G035470	Cucumber (Chinese Long) v3	carcucB0997
Carg25493	Cla97C02G034840	Watermelon (97103) v2	carwmbB1004
Carg25493	Bhi10G001183	Wax gourd	carwgoB1106

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25493	Cucurbita maxima (Rimu)	carcmaB1309
Carg25493	Cucurbita moschata (Rifu)	carcmoB1278
Carg25493	Cucurbita pepo (Zucchini)	carcpeB1322
Carg25493	Cucurbita pepo (Zucchini)	carcpeB1323