Lsi09G017010 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G017010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPollen allergen Ole e 6-like protein
Locationchr09 : 25524932 .. 25526107 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAACATCGACTGTCTTAAATCATTTTTTTCGCTATTTCCATAGACATTTCATACGTTTTTGAGTTCCACGTCGATTTAAGGAATGCATCAACCTTAAAAAAGGCAATTATATAACAAAAATAATGATGGGTGAATGCTAAATCGTTTATAAATAGAAAACATATGAAATTATTTACAAATGTAGAAATTTTTTTCTATATTTGTAAATAGAGGAATTTTTAAAAATAGATTAATAAGGGAAACTATTTACACAAAATAACAAAATTTTTAAGATAGTTATGATAGATGCTAATAGAAGTCTATCAGGATCTATCAGTGATAGAATTTCTATCACTGATAAATACTGATAGAAGTTTATCAATGTCTTTTTAATATTTTTTGTAAATATTTTGACATTTTTTCTATTTGTGATAATTTTCCTTTTCTATATTTGAAAATAACTATGTTTTATTTTTATAAAATTTTAAATATTTCCATATGGAAATTTTCATACAATTGATATTTTGAAATGTTATTTTTAATAAGTATTATTTATTATATTAATTTCAATTGTTGTGTTTGTTTCACAGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT

mRNA sequence

ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGA

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAADKLHIDLH
Homology
[Close]
BLAST of Lsi09G017010 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-08
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 1 

Query: 36 DAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAADKL 78
          +A++K CY+TC KEC +KG+G +FCE+KCD DC+ K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]
BLAST of Lsi09G017010 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.9e-28
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EEVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MA KMIA+FLM IVVVAALQFA AN E+V +YEAKFDAKYKSC+ETC KECL  GSG+S+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCNEKEAADKLHIDLH 83
          CEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]
BLAST of Lsi09G017010 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-26
Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEE--VEQYEAKFDAKYKSCYETCLKECLEKGS-GE 60
          MAKKM+AVFLM IVVVA LQF  ANEE  V +YEAKFDAKYKSCYETC KECL   + GE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCNEKEAADKLHIDLH 83
          SFCEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]
BLAST of Lsi09G017010 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.1e-25
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVE--QYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKM+AVFLM IVVV +LQFATAN+E E   YEAKFDAKYK+C+ TC KEC+E+GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCNEKEAADKLHI 80
          +CEVKCDEDC  KEAADKLHI
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

[Close]
BLAST of Lsi09G017010 vs. TrEMBL
Match: A0A0A0K9T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G101980 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.2e-21
Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATA-NEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MAKK++AVF M IVV+A+LQF  A NEEV++YEAK++AKY SCYE CL+ CL + SG  +
Sbjct: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60

Query: 61 CEVKCDEDCNEKEAADKLHIDL 82
          CEVKCDEDC EKE A+KLHI +
Sbjct: 61 CEVKCDEDCEEKEVAEKLHIQI 82

[Close]
BLAST of Lsi09G017010 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-20
Identity = 54/81 (66.67%), Postives = 69/81 (85.19%), Query Frame = 1 

Query: 3  KKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKG-SGESF 62
          KKM+ V L+ IVV+AAL+F+  N  E+ ++YE+KFDAKYK+CYE+C KECLE G +G+SF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCNEKEAADKLHID 81
          CEVKCDEDC EKE+ADKLHI+
Sbjct: 64 CEVKCDEDCGEKESADKLHIN 84

[Close]
BLAST of Lsi09G017010 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAADKLHIDLH 83
          +CEVKCDEDCNEKE ADKLHI+LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]
BLAST of Lsi09G017010 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-27
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EEVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MA KMIA+FLM IVVVAALQFA AN E+V +YEAKFDAKYKSC+ETC KECL  GSG+S+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCNEKEAADKLHIDLH 83
          CEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]
BLAST of Lsi09G017010 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 3.2e-26
Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEE--VEQYEAKFDAKYKSCYETCLKECLEKGS-GE 60
          MAKKM+AVFLM IVVVA LQF  ANEE  V +YEAKFDAKYKSCYETC KECL   + GE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCNEKEAADKLHIDLH 83
          SFCEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]
BLAST of Lsi09G017010 vs. NCBI nr
Match: gi|449445523|ref|XP_004140522.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-24
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVE--QYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKM+AVFLM IVVV +LQFATAN+E E   YEAKFDAKYK+C+ TC KEC+E+GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCNEKEAADKLHI 80
          +CEVKCDEDC  KEAADKLHI
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

[Close]
BLAST of Lsi09G017010 vs. NCBI nr
Match: gi|659119712|ref|XP_008459802.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 62/84 (73.81%), Postives = 69/84 (82.14%), Query Frame = 1 

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKM+AVFLM IVVVA LQFATAN  +EV  YEAKFDAKYK+C+  C KEC+E+G G S
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKFDAKYKACFVICEKECVERGGGHS 60

Query: 61 FCEVKCDEDCNEKEAADKLHIDLH 83
          +CEVKCDEDC  KEAADKL I LH
Sbjct: 61 YCEVKCDEDCGAKEAADKLGIILH 84

The following BLAST results are available for this feature:
BLAST of Lsi09G017010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALL6_OLEEU2.3e-0854.76Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1[more]
BLAST of Lsi09G017010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPA7_CUCSA8.9e-2880.72Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0K9Z9_CUCSA2.2e-2680.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KDP7_CUCSA7.1e-2576.54Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1[more]
A0A0A0K9T2_CUCSA6.2e-2165.85Uncharacterized protein OS=Cucumis sativus GN=Csa_6G101980 PE=4 SV=1[more]
A0A0A0KCI6_CUCSA2.4e-2066.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1[more]
BLAST of Lsi09G017010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi09G017010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114221|ref|XP_008456958.1|1.2e-2880.95PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo][more]
gi|449457470|ref|XP_004146471.1|1.3e-2780.72PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|700191316|gb|KGN46520.1|3.2e-2680.00hypothetical protein Csa_6G106720 [Cucumis sativus][more]
gi|449445523|ref|XP_004140522.1|1.0e-2476.54PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|659119712|ref|XP_008459802.1|1.1e-2373.81PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015333Pollen_allergen_ole-e-6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G017010.1Lsi09G017010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6GENE3DG3DSA:1.10.287.720coord: 37..78
score: 3.1
IPR015333Pollen allergen ole e 6PFAMPF09253Ole-e-6coord: 42..78
score: 4.6
IPR015333Pollen allergen ole e 6unknownSSF111388Pollen allergen ole e 6coord: 36..77
score: 1.15
NoneNo IPR availablePANTHERPTHR35632FAMILY NOT NAMEDcoord: 1..79
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G017010CmaCh17G005400Cucurbita maxima (Rimu)cmalsiB331
Lsi09G017010MELO3C022293Melon (DHL92) v3.5.1lsimeB017
Lsi09G017010CsGy6G008130Cucumber (Gy14) v2cgyblsiB366
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G017010Wild cucumber (PI 183967)cpilsiB404
Lsi09G017010Cucumber (Chinese Long) v2culsiB402
Lsi09G017010Watermelon (Charleston Gray)lsiwcgB029
Lsi09G017010Watermelon (97103) v1lsiwmB036
Lsi09G017010Melon (DHL92) v3.6.1lsimedB019
Lsi09G017010Silver-seed gourdcarlsiB070
Lsi09G017010Silver-seed gourdcarlsiB883
Lsi09G017010Cucumber (Chinese Long) v3cuclsiB424
Lsi09G017010Watermelon (97103) v2lsiwmbB026
Lsi09G017010Wax gourdlsiwgoB011
Lsi09G017010Cucumber (Gy14) v1cgylsiB562
Lsi09G017010Cucurbita maxima (Rimu)cmalsiB814
Lsi09G017010Cucurbita moschata (Rifu)cmolsiB320
Lsi09G017010Cucurbita moschata (Rifu)cmolsiB800
Lsi09G017010Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G017010Cucurbita pepo (Zucchini)cpelsiB251