Lsi09G013780 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G013780
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant/F10N7-170 protein, putative
Location	chr09 : 21800244 .. 21800837 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCGCCGGCAGCGTTTTGTCGCCGGAGGAGTTCTTATGGAAACTATGATTCGAATGTTTACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCGAAGAGATCGAGTTCTGACGATTTGAAAGCGATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAAATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACAGATAGGTTGGGGCCGGCGCCGGAAATGGTTCCGAAACAGATCCGGATCGTTGACGTTAGGTGTCCGATAGCCGGAAAACCCGATGTTGTTTACGCCGGTTCGGCTTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCATTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

mRNA sequence

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCGCCGGCAGCGTTTTGTCGCCGGAGGAGTTCTTATGGAAACTATGATTCGAATGTTTACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCGAAGAGATCGAGTTCTGACGATTTGAAAGCGATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAAATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACAGATAGGTTGGGGCCGGCGCCGGAAATGGTTCCGAAACAGATCCGGATCGTTGACGTTAGGTGTCCGATAGCCGGAAAACCCGATGTTGTTTACGCCGGTTCGGCTTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCATTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

Coding sequence (CDS)

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCGCCGGCAGCGTTTTGTCGCCGGAGGAGTTCTTATGGAAACTATGATTCGAATGTTTACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCGAAGAGATCGAGTTCTGACGATTTGAAAGCGATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAAATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACAGATAGGTTGGGGCCGGCGCCGGAAATGGTTCCGAAACAGATCCGGATCGTTGACGTTAGGTGTCCGATAGCCGGAAAACCCGATGTTGTTTACGCCGGTTCGGCTTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCATTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

Protein sequence

MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLRRLLRLDA

Homology

[Close]

BLAST of Lsi09G013780 vs. TrEMBL
Match: A0A0A0KCP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G062315 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.5e-92
Identity = 187/201 (93.03%), Postives = 189/201 (94.03%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYN-YNPRSNRKSVARSERPE--- 60
           MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSN+ N YNPRSNRKSVARSERPE   
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           VVCGTDRLGPAPE V KQIRIVDVR PIAGK D VYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRSPIAGKAD-VYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 VSTIVDDSATRDLRRLLRLDA 198
           VS IVDDSATRDLRRLLRLDA
Sbjct: 181 VSAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Lsi09G013780 vs. TrEMBL
Match: W9RRZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011289 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.8e-54
Identity = 134/215 (62.33%), Postives = 155/215 (72.09%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNY----------NPRSNRKSVA 60
           M TE+LRP D L ERIRV PAA+ RR+S YGN +S+  +Y          NPRS+R+   
Sbjct: 1   MATEVLRPHDWLTERIRVTPAAYSRRKSYYGNPNSSSNSYNNNFNSCSTANPRSSRRPAV 60

Query: 61  RSER-PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSE-- 120
           R ER PEQR+         S SKRSSSDDLKA+K    MEKVTILRRGESL+SKIKS   
Sbjct: 61  RPERLPEQRR--------SSFSKRSSSDDLKAVK---TMEKVTILRRGESLESKIKSSGE 120

Query: 121 -ALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSL 180
            ALKKEG +LVVCG  RLGPAPEMVPK++ IVD+R P+ G  D VYAGSAF++SP+PSSL
Sbjct: 121 AALKKEGGDLVVCGIQRLGPAPEMVPKRLGIVDLRVPVVGNSD-VYAGSAFAVSPAPSSL 180

Query: 181 PLPSFSKKKH-----VSTIVDDSATRDLRRLLRLD 197
           PLPSFSKKK       + IVDDSATRDLRRLLR+D
Sbjct: 181 PLPSFSKKKQGPPSPAAVIVDDSATRDLRRLLRID 203

[Close]

BLAST of Lsi09G013780 vs. TrEMBL
Match: A0A061ENV9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021091 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.0e-53
Identity = 126/197 (63.96%), Postives = 151/197 (76.65%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKR 60
           MGTE+LRPQDCLIERIR  P A  RRR   G+++ + Y  N  +N  +   + +P  RKR
Sbjct: 1   MGTEVLRPQDCLIERIRFAPTACSRRRYGNGSFNPSYYYNNNNNNSGNGRFNRKPAHRKR 60

Query: 61  FVSNHSEPSVSKRSSS-DDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120
                SE ++SKRSSS DDLK ++N++ MEKVT+LRRGESLDSKIKS +  +EG  LVV 
Sbjct: 61  ---TGSEQAISKRSSSADDLKTVRNNVTMEKVTLLRRGESLDSKIKSSSGGREG-GLVVT 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKHVST 180
           GTDRLGPAPEMVPKQI+IVD+R  +  K D VYAGSAF++SP+PSSLPLPSFSKKK VS 
Sbjct: 121 GTDRLGPAPEMVPKQIKIVDIRSAVTAKSD-VYAGSAFAVSPAPSSLPLPSFSKKKQVS- 180

Query: 181 IVDDSATRDLRRLLRLD 197
            +DDSATRDLRRLLRLD
Sbjct: 181 -IDDSATRDLRRLLRLD 190

[Close]

BLAST of Lsi09G013780 vs. TrEMBL
Match: F6HDJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02270 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52
Identity = 123/200 (61.50%), Postives = 156/200 (78.00%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKR 60
           MGTEILRPQDCLIER+ V PA F RR++  G+          ++NR+ V R+ER +Q++R
Sbjct: 1   MGTEILRPQDCLIERMGVSPAVFPRRKAFPGS---------AKANRRPVVRAERSDQKRR 60

Query: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN-LVVC 120
              + SE S+SKRSSSDD++A K ++V+  VTILRRGESLDSK+KSEALKK G+  ++V 
Sbjct: 61  --GSQSEGSISKRSSSDDVRAAKGNVVVGPVTILRRGESLDSKLKSEALKKNGEEEMIVS 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVR---CPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           GT+RLGP PEMVPKQIRI D++     +A KPD+ YAGSAF++SPSPSSLPLPSFS+KK 
Sbjct: 121 GTERLGPDPEMVPKQIRIKDLKPFAFSVAAKPDM-YAGSAFALSPSPSSLPLPSFSRKKQ 180

Query: 181 VSTIVDDSATRDLRRLLRLD 197
           +S +VDD AT+DLRRLLRLD
Sbjct: 181 MSPVVDDWATKDLRRLLRLD 188

[Close]

BLAST of Lsi09G013780 vs. TrEMBL
Match: I3SZ00_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.8e-51
Identity = 128/197 (64.97%), Postives = 146/197 (74.11%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKR 60
           MGTEILRPQ+CLIERIR PPA+F  RR++YGN  + + N   R+NRK VAR   PEQRKR
Sbjct: 1   MGTEILRPQNCLIERIRAPPASFSWRRTTYGNCGAYL-NAPFRANRKPVAR---PEQRKR 60

Query: 61  FVSNHSEPSVSKRSSSDDLKAMKNS-LVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120
            V         +R SSDD K  + S LVMEKVTILRRGESLDS+IKSEALK+EGD LVV 
Sbjct: 61  VVE--------RRPSSDDSKVARGSGLVMEKVTILRRGESLDSQIKSEALKREGDELVVV 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKHVST 180
           GT RLGP PEMVPKQIRI+D +         +YAGSAF+MSPSP +LPLPSF KK   + 
Sbjct: 121 GTQRLGPDPEMVPKQIRIMDGQIGFD-----MYAGSAFAMSPSPRALPLPSFWKKVAPAV 180

Query: 181 IVDDSATRDLRRLLRLD 197
            VDDSATRDLRRLLRL+
Sbjct: 181 AVDDSATRDLRRLLRLE 180

[Close]

BLAST of Lsi09G013780 vs. TAIR10
Match: AT3G21570.1 (AT3G21570.1 unknown protein)

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15
Identity = 71/200 (35.50%), Postives = 95/200 (47.50%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKR 60
           MGTEI+RPQ+CL++R+R  PA F                +N R N        +P+QR+R
Sbjct: 1   MGTEIIRPQNCLVDRMRDSPATF----------------FNSRRNHFHRKPPLKPDQRRR 60

Query: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVCG 120
           F              SD+ +         K  + R+GES DS            N+ V  
Sbjct: 61  F-------------GSDEFRTTT------KNIVRRKGESFDSF----------SNIKVRK 120

Query: 121 TDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSA-FSMSPSPSSLPLPSFSKKKHVST 180
                 +PE+                  D +YAGS+ F++SP+PSSLPLPSFSKKK  S 
Sbjct: 121 Y-----SPEV----------------SADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQ 134

Query: 181 IV----DDSATRDLRRLLRL 196
           +V    DDSA++DLRRLLRL
Sbjct: 181 VVVVSIDDSASQDLRRLLRL 134

[Close]

BLAST of Lsi09G013780 vs. TAIR10
Match: AT4G32020.1 (AT4G32020.1 unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 62/202 (30.69%), Postives = 95/202 (47.03%), Query Frame = 1


Query: 1   MGTEILRPQDCL------IERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSER 60
           MG  +L PQDCL      +++ R P A   R++ +  N  +       +S+R S      
Sbjct: 1   MGVAVLNPQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAP 60

Query: 61  PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGD 120
           P    R   +   P  + +      K++ N++ + +V IL+RGE +  K  S+ + +  D
Sbjct: 61  PLPPPRAAVSAFVPKGTLK------KSLSNTVAVSQVRILKRGEEIP-KETSDLVVEMSD 120

Query: 121 NLVVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKK 180
              +  T R+GP P ++P QIR+   +     K    YAG     SP PS +PLP+F  K
Sbjct: 121 ---LGSTRRIGPDPGLIPGQIRLSGRK----SKSAPFYAGPVTMTSPPPSDVPLPAFFTK 179

Query: 181 KHVSTIVDDSATRDLRRLLRLD 197
           K         AT DL R+LRLD
Sbjct: 181 K---------ATNDLIRILRLD 179

[Close]

BLAST of Lsi09G013780 vs. TAIR10
Match: AT2G25250.1 (AT2G25250.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06
Identity = 43/142 (30.28%), Postives = 63/142 (44.37%), Query Frame = 1


Query: 55  PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGD 114
           P + K+ ++N    S S   S               V IL+RGE ++ KI  E    + +
Sbjct: 23  PLRHKKPITNRRRRSPSSHQSQISHPPPSPHNHTNHVRILKRGEDINVKIPIEKPDLKSN 82

Query: 115 NLVVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKK 174
                   ++G  P  +   IRI + +      P + YAG   S SP PS +PLP+F   
Sbjct: 83  R-------QIGSDPMKISTPIRISNRK----SMPALFYAGPVTSTSPPPSEVPLPAFFAN 142

Query: 175 KHVSTIVDDSATRDLRRLLRLD 197
           K V+      AT DL ++LRLD
Sbjct: 143 KTVAGFKPTDATNDLIKILRLD 153

[Close]

BLAST of Lsi09G013780 vs. NCBI nr
Match: gi|659117291|ref|XP_008458522.1| (PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.4e-93
Identity = 189/201 (94.03%), Postives = 191/201 (95.02%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYN-YNPRSNRKSVARSER---PE 60
           MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSN+ N YNPRSNRKSVARSER   PE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           VVCGTDRLGPAPE V KQIRIVDVRCPIAGK D VYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKAD-VYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 VSTIVDDSATRDLRRLLRLDA 198
           VSTIVDDSATRDLRRLLRLDA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Lsi09G013780 vs. NCBI nr
Match: gi|449454444|ref|XP_004144965.1| (PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 7.9e-92
Identity = 187/201 (93.03%), Postives = 189/201 (94.03%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYN-YNPRSNRKSVARSERPE--- 60
           MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSN+ N YNPRSNRKSVARSERPE   
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           VVCGTDRLGPAPE V KQIRIVDVR PIAGK D VYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRSPIAGKAD-VYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 VSTIVDDSATRDLRRLLRLDA 198
           VS IVDDSATRDLRRLLRLDA
Sbjct: 181 VSAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Lsi09G013780 vs. NCBI nr
Match: gi|1009141820|ref|XP_015888392.1| (PREDICTED: uncharacterized protein LOC107423359 [Ziziphus jujuba])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 147/211 (69.67%), Postives = 163/211 (77.25%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNV-----YNY-NPRSNRKS-----V 60
           MGTEILRPQDCLIERIRVPPA+F RR+S YGN + N      ++Y NPR NRK      V
Sbjct: 1   MGTEILRPQDCLIERIRVPPASFYRRKSYYGNPNPNPNPNPNFHYSNPRPNRKQHHHQVV 60

Query: 61  ARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKS-EA 120
            RSE+ ++RK      SEPSVSKR+SS DL AMK    MEKVTILRRGESLDSKIKS E 
Sbjct: 61  LRSEKRDERKLQHRYGSEPSVSKRTSSGDLSAMKT---MEKVTILRRGESLDSKIKSSEG 120

Query: 121 LKKEGDN-LVVCGTDRLGPAPEMVPKQIRIVDVRCP--IAGKPDVVYAGSAFSMSPSPSS 180
           LKKE D  LVVCGT+RLGP PEMVPKQ RIVD++ P  +AGK D VYAGSA ++SP+PSS
Sbjct: 121 LKKESDGGLVVCGTERLGPDPEMVPKQTRIVDLKSPPVVAGKTD-VYAGSACAVSPAPSS 180

Query: 181 LPLPSFSKKKHVSTIVDDSATRDLRRLLRLD 197
           LPLPSFSKKK V  IVDDSATRDLRRLLRLD
Sbjct: 181 LPLPSFSKKKQVFAIVDDSATRDLRRLLRLD 207

[Close]

BLAST of Lsi09G013780 vs. NCBI nr
Match: gi|703134599|ref|XP_010105678.1| (hypothetical protein L484_011289 [Morus notabilis])

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 134/215 (62.33%), Postives = 155/215 (72.09%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNY----------NPRSNRKSVA 60
           M TE+LRP D L ERIRV PAA+ RR+S YGN +S+  +Y          NPRS+R+   
Sbjct: 1   MATEVLRPHDWLTERIRVTPAAYSRRKSYYGNPNSSSNSYNNNFNSCSTANPRSSRRPAV 60

Query: 61  RSER-PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSE-- 120
           R ER PEQR+         S SKRSSSDDLKA+K    MEKVTILRRGESL+SKIKS   
Sbjct: 61  RPERLPEQRR--------SSFSKRSSSDDLKAVK---TMEKVTILRRGESLESKIKSSGE 120

Query: 121 -ALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSL 180
            ALKKEG +LVVCG  RLGPAPEMVPK++ IVD+R P+ G  D VYAGSAF++SP+PSSL
Sbjct: 121 AALKKEGGDLVVCGIQRLGPAPEMVPKRLGIVDLRVPVVGNSD-VYAGSAFAVSPAPSSL 180

Query: 181 PLPSFSKKKH-----VSTIVDDSATRDLRRLLRLD 197
           PLPSFSKKK       + IVDDSATRDLRRLLR+D
Sbjct: 181 PLPSFSKKKQGPPSPAAVIVDDSATRDLRRLLRID 203

[Close]

BLAST of Lsi09G013780 vs. NCBI nr
Match: gi|590660466|ref|XP_007035407.1| (Uncharacterized protein TCM_021091 [Theobroma cacao])

HSP 1 Score: 216.5 bits (550), Expect = 4.3e-53
Identity = 126/197 (63.96%), Postives = 151/197 (76.65%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNVYNYNPRSNRKSVARSERPEQRKR 60
           MGTE+LRPQDCLIERIR  P A  RRR   G+++ + Y  N  +N  +   + +P  RKR
Sbjct: 1   MGTEVLRPQDCLIERIRFAPTACSRRRYGNGSFNPSYYYNNNNNNSGNGRFNRKPAHRKR 60

Query: 61  FVSNHSEPSVSKRSSS-DDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120
                SE ++SKRSSS DDLK ++N++ MEKVT+LRRGESLDSKIKS +  +EG  LVV 
Sbjct: 61  ---TGSEQAISKRSSSADDLKTVRNNVTMEKVTLLRRGESLDSKIKSSSGGREG-GLVVT 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVRCPIAGKPDVVYAGSAFSMSPSPSSLPLPSFSKKKHVST 180
           GTDRLGPAPEMVPKQI+IVD+R  +  K D VYAGSAF++SP+PSSLPLPSFSKKK VS 
Sbjct: 121 GTDRLGPAPEMVPKQIKIVDIRSAVTAKSD-VYAGSAFAVSPAPSSLPLPSFSKKKQVS- 180

Query: 181 IVDDSATRDLRRLLRLD 197
            +DDSATRDLRRLLRLD
Sbjct: 181 -IDDSATRDLRRLLRLD 190

The following BLAST results are available for this feature:

BLAST of Lsi09G013780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G013780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCP9_CUCSA	5.5e-92	93.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G062315 PE=4 SV=1	[more]
W9RRZ8_9ROSA	7.8e-54	62.33	Uncharacterized protein OS=Morus notabilis GN=L484_011289 PE=4 SV=1	[more]
A0A061ENV9_THECC	3.0e-53	63.96	Uncharacterized protein OS=Theobroma cacao GN=TCM_021091 PE=4 SV=1	[more]
F6HDJ3_VITVI	1.1e-52	61.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02270 PE=4 SV=...	[more]
I3SZ00_LOTJA	2.8e-51	64.97	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of Lsi09G013780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21570.1	6.4e-15	35.50	unknown protein	[more]
AT4G32020.1	1.2e-10	30.69	unknown protein	[more]
AT2G25250.1	3.2e-06	30.28	unknown protein	[more]

BLAST of Lsi09G013780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117291\|ref\|XP_008458522.1\|	1.4e-93	94.03	PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo]	[more]
gi\|449454444\|ref\|XP_004144965.1\|	7.9e-92	93.03	PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus]	[more]
gi\|1009141820\|ref\|XP_015888392.1\|	2.3e-59	69.67	PREDICTED: uncharacterized protein LOC107423359 [Ziziphus jujuba]	[more]
gi\|703134599\|ref\|XP_010105678.1\|	1.1e-53	62.33	hypothetical protein L484_011289 [Morus notabilis]	[more]
gi\|590660466\|ref\|XP_007035407.1\|	4.3e-53	63.96	Uncharacterized protein TCM_021091 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G013780.1	Lsi09G013780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 2..197 score: 8.5
None	No IPR available	PANTHER	PTHR33670:SF1	SUBFAMILY NOT NAMED	coord: 2..197 score: 8.5
None	No IPR available	PFAM	PF15365	PNRC	coord: 151..194 score: 7.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G013780	CSPI06G05210	Wild cucumber (PI 183967)	cpilsiB398
Lsi09G013780	CmaCh17G002880	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G013780	CmaCh08G011880	Cucurbita maxima (Rimu)	cmalsiB811
Lsi09G013780	CmoCh17G002770	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G013780	CmoCh08G011590	Cucurbita moschata (Rifu)	cmolsiB797
Lsi09G013780	Cla009356	Watermelon (97103) v1	lsiwmB040
Lsi09G013780	MELO3C021383	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G013780	ClCG06G005610	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G013780	MELO3C021383.2	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G013780	Cla97C06G115120	Watermelon (97103) v2	lsiwmbB026
Lsi09G013780	Bhi12G001574	Wax gourd	lsiwgoB023
Lsi09G013780	CsGy6G005160	Cucumber (Gy14) v2	cgyblsiB361
Lsi09G013780	Carg15943	Silver-seed gourd	carlsiB296
Lsi09G013780	Carg05470	Silver-seed gourd	carlsiB061
Lsi09G013780	CsaV3_6G005540	Cucumber (Chinese Long) v3	cuclsiB419

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G013780	Wax gourd	lsiwgoB041
Lsi09G013780	Bottle gourd (USVL1VR-Ls)	lsilsiB006
Lsi09G013780	Cucumber (Gy14) v1	cgylsiB412
Lsi09G013780	Cucumber (Gy14) v1	cgylsiB584
Lsi09G013780	Cucurbita maxima (Rimu)	cmalsiB225
Lsi09G013780	Cucurbita maxima (Rimu)	cmalsiB741
Lsi09G013780	Cucurbita moschata (Rifu)	cmolsiB213
Lsi09G013780	Cucurbita moschata (Rifu)	cmolsiB733
Lsi09G013780	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G013780	Cucurbita pepo (Zucchini)	cpelsiB254
Lsi09G013780	Cucurbita pepo (Zucchini)	cpelsiB484
Lsi09G013780	Cucurbita pepo (Zucchini)	cpelsiB697
Lsi09G013780	Wild cucumber (PI 183967)	cpilsiB149
Lsi09G013780	Cucumber (Chinese Long) v2	culsiB150
Lsi09G013780	Cucumber (Chinese Long) v2	culsiB395
Lsi09G013780	Melon (DHL92) v3.5.1	lsimeB029
Lsi09G013780	Watermelon (Charleston Gray)	lsiwcgB017
Lsi09G013780	Watermelon (97103) v1	lsiwmB017
Lsi09G013780	Cucumber (Gy14) v2	cgyblsiB136
Lsi09G013780	Melon (DHL92) v3.6.1	lsimedB032
Lsi09G013780	Silver-seed gourd	carlsiB550
Lsi09G013780	Silver-seed gourd	carlsiB760
Lsi09G013780	Cucumber (Chinese Long) v3	cuclsiB163
Lsi09G013780	Watermelon (97103) v2	lsiwmbB015