ClCG06G005610 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G005610
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr06 : 6355536 .. 6356126 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGATTTGTCGCCGGAGGAGTTCTTATGGAAACTATGACTCGAATGTTTACAACTATAATTCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAAGCAATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACCGATAGGTTGGGACCGGCGCCGGAAATGGTTCCGAAACAGATACGGATTGTCGACGTTCGGTGTTCGATAGCCGGAAAAGCCGATGTTTACGCCGGGTCGGCGTTTTCGATGTCGCCGTCCCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

mRNA sequence

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGATTTGTCGCCGGAGGAGTTCTTATGGAAACTATGACTCGAATGTTTACAACTATAATTCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAAGCAATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACCGATAGGTTGGGACCGGCGCCGGAAATGGTTCCGAAACAGATACGGATTGTCGACGTTCGGTGTTCGATAGCCGGAAAAGCCGATGTTTACGCCGGGTCGGCGTTTTCGATGTCGCCGTCCCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

Coding sequence (CDS)

ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGATTTGTCGCCGGAGGAGTTCTTATGGAAACTATGACTCGAATGTTTACAACTATAATTCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAAGCAATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGTGATAATCTTGTCGTGTGTGGGACCGATAGGTTGGGACCGGCGCCGGAAATGGTTCCGAAACAGATACGGATTGTCGACGTTCGGTGTTCGATAGCCGGAAAAGCCGATGTTTACGCCGGGTCGGCGTTTTCGATGTCGCCGTCCCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA

Protein sequence

MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLRRLLRLDA

Homology

[Close]

BLAST of ClCG06G005610 vs. TrEMBL
Match: A0A0A0KCP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G062315 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.9e-94
Identity = 185/200 (92.50%), Postives = 187/200 (93.50%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYN-YNSRSNRKSVARSERPE--- 60
           MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+ N YN RSNRKSVARSERPE   
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180
           VVCGTDRLGPAPE V KQIRIVDVR  IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRSPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           S IVDDSATRDLRRLLRLDA
Sbjct: 181 SAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of ClCG06G005610 vs. TrEMBL
Match: A0A061ENV9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021091 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-58
Identity = 126/196 (64.29%), Postives = 154/196 (78.57%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKR 60
           MGTE+LRPQDCLIERIR  P A  RRR   G+++ + Y  N+ +N  +   + +P  RKR
Sbjct: 1   MGTEVLRPQDCLIERIRFAPTACSRRRYGNGSFNPSYYYNNNNNNSGNGRFNRKPAHRKR 60

Query: 61  FVSNHSEPSVSKRSSS-DDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120
                SE ++SKRSSS DDLK ++N++ MEKVT+LRRGESLDSKIKS +  +EG  LVV 
Sbjct: 61  ---TGSEQAISKRSSSADDLKTVRNNVTMEKVTLLRRGESLDSKIKSSSGGREG-GLVVT 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTI 180
           GTDRLGPAPEMVPKQI+IVD+R ++  K+DVYAGSAF++SP+PSSLPLPSFSKKK VS  
Sbjct: 121 GTDRLGPAPEMVPKQIKIVDIRSAVTAKSDVYAGSAFAVSPAPSSLPLPSFSKKKQVS-- 180

Query: 181 VDDSATRDLRRLLRLD 196
           +DDSATRDLRRLLRLD
Sbjct: 181 IDDSATRDLRRLLRLD 190

[Close]

BLAST of ClCG06G005610 vs. TrEMBL
Match: W9RRZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011289 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.9e-56
Identity = 129/206 (62.62%), Postives = 149/206 (72.33%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVAR---SERPEQ 60
           M TE+LRP D L ERIRV PAA  RR+S YGN +S+  +YN+  N  S A    S RP  
Sbjct: 1   MATEVLRPHDWLTERIRVTPAAYSRRKSYYGNPNSSSNSYNNNFNSCSTANPRSSRRPAV 60

Query: 61  RKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSE---ALKKEGD 120
           R   +      S SKRSSSDDLKA+K    MEKVTILRRGESL+SKIKS    ALKKEG 
Sbjct: 61  RPERLPEQRRSSFSKRSSSDDLKAVKT---MEKVTILRRGESLESKIKSSGEAALKKEGG 120

Query: 121 NLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKK 180
           +LVVCG  RLGPAPEMVPK++ IVD+R  + G +DVYAGSAF++SP+PSSLPLPSFSKKK
Sbjct: 121 DLVVCGIQRLGPAPEMVPKRLGIVDLRVPVVGNSDVYAGSAFAVSPAPSSLPLPSFSKKK 180

Query: 181 H-----VSTIVDDSATRDLRRLLRLD 196
                  + IVDDSATRDLRRLLR+D
Sbjct: 181 QGPPSPAAVIVDDSATRDLRRLLRID 203

[Close]

BLAST of ClCG06G005610 vs. TrEMBL
Match: F6HDJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02270 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.3e-56
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKR 60
           MGTEILRPQDCLIER+ V PA   RR++  G+         +++NR+ V R+ER +Q++R
Sbjct: 1   MGTEILRPQDCLIERMGVSPAVFPRRKAFPGS---------AKANRRPVVRAERSDQKRR 60

Query: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN-LVVC 120
              + SE S+SKRSSSDD++A K ++V+  VTILRRGESLDSK+KSEALKK G+  ++V 
Sbjct: 61  --GSQSEGSISKRSSSDDVRAAKGNVVVGPVTILRRGESLDSKLKSEALKKNGEEEMIVS 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVR---CSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180
           GT+RLGP PEMVPKQIRI D++    S+A K D+YAGSAF++SPSPSSLPLPSFS+KK +
Sbjct: 121 GTERLGPDPEMVPKQIRIKDLKPFAFSVAAKPDMYAGSAFALSPSPSSLPLPSFSRKKQM 180

Query: 181 STIVDDSATRDLRRLLRLD 196
           S +VDD AT+DLRRLLRLD
Sbjct: 181 SPVVDDWATKDLRRLLRLD 188

[Close]

BLAST of ClCG06G005610 vs. TrEMBL
Match: A0A0D2NN64_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G074600 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-54
Identity = 128/200 (64.00%), Postives = 145/200 (72.50%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSN-VYNYNSRSNRKS---VARSERPE 60
           MGTEILRPQDCLIE+IRV   A  RRR  YGN   N  YNYN+ ++  S   V  + +P 
Sbjct: 1   MGTEILRPQDCLIEQIRVSSTACSRRR--YGNGSFNPTYNYNNSNSNNSNGNVRFTRKPV 60

Query: 61  QRKRFVSNHSEPSVSKRSSS-DDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120
           QRKR     SE  VSKRS S DDL  + N+  MEKVTILRRGESLDSKIKS     + D 
Sbjct: 61  QRKRV---GSEQRVSKRSGSVDDLNTVANNFKMEKVTILRRGESLDSKIKSNNGGGKEDG 120

Query: 121 LVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           LV  GTDRLGP PEMV KQIR VD++  + GK+DVYAGSAF++SP PSSLPLPSFSKKKH
Sbjct: 121 LVATGTDRLGPDPEMVSKQIRFVDIKSPVTGKSDVYAGSAFAVSPEPSSLPLPSFSKKKH 180

Query: 181 VSTIVDDSATRDLRRLLRLD 196
           V   +DDSATRDLRR+LRLD
Sbjct: 181 VP--IDDSATRDLRRILRLD 193

[Close]

BLAST of ClCG06G005610 vs. TAIR10
Match: AT4G32020.1 (AT4G32020.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14
Identity = 63/201 (31.34%), Postives = 96/201 (47.76%), Query Frame = 1


Query: 1   MGTEILRPQDCL------IERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSER 60
           MG  +L PQDCL      +++ R P A   R++ +  N  +      S+S+R S      
Sbjct: 1   MGVAVLNPQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAP 60

Query: 61  PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGD 120
           P    R   +   P  + +      K++ N++ + +V IL+RGE +  K  S+ + +  D
Sbjct: 61  PLPPPRAAVSAFVPKGTLK------KSLSNTVAVSQVRILKRGEEIP-KETSDLVVEMSD 120

Query: 121 NLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKK 180
              +  T R+GP P ++P QIR+   +   +  A  YAG     SP PS +PLP+F  KK
Sbjct: 121 ---LGSTRRIGPDPGLIPGQIRLSGRK---SKSAPFYAGPVTMTSPPPSDVPLPAFFTKK 179

Query: 181 HVSTIVDDSATRDLRRLLRLD 196
                    AT DL R+LRLD
Sbjct: 181 ---------ATNDLIRILRLD 179

[Close]

BLAST of ClCG06G005610 vs. TAIR10
Match: AT3G21570.1 (AT3G21570.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 9.5e-11
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 1


Query: 149 DVYAGSA-FSMSPSPSSLPLPSFSKKKHVSTIV----DDSATRDLRRLLRL 195
           D+YAGS+ F++SP+PSSLPLPSFSKKK  S +V    DDSA++DLRRLLRL
Sbjct: 84  DIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQDLRRLLRL 134

HSP 2 Score: 47.8 bits (112), Expect = 9.2e-06
Identity = 38/137 (27.74%), Postives = 58/137 (42.34%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKR 60
           MGTEI+RPQ+CL++R+R  PA                  +NSR N        +P+QR+R
Sbjct: 1   MGTEIIRPQNCLVDRMRDSPATF----------------FNSRRNHFHRKPPLKPDQRRR 60

Query: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDS----KIKSEALKKEGDNL 120
           F              SD+ +    ++V       R+GES DS    K++  + +   D++
Sbjct: 61  F-------------GSDEFRTTTKNIVR------RKGESFDSFSNIKVRKYSPEVSADDI 102

Query: 121 VV-CGTDRLGPAPEMVP 133
                   + PAP  +P
Sbjct: 121 YAGSSIFAVSPAPSSLP 102

[Close]

BLAST of ClCG06G005610 vs. TAIR10
Match: AT2G25250.1 (AT2G25250.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 43/141 (30.50%), Postives = 61/141 (43.26%), Query Frame = 1


Query: 55  PEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGD 114
           P + K+ ++N    S S   S               V IL+RGE ++ KI  E    + +
Sbjct: 23  PLRHKKPITNRRRRSPSSHQSQISHPPPSPHNHTNHVRILKRGEDINVKIPIEKPDLKSN 82

Query: 115 NLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKK 174
                   ++G  P  +   IRI + +      A  YAG   S SP PS +PLP+F   K
Sbjct: 83  R-------QIGSDPMKISTPIRISNRKSM---PALFYAGPVTSTSPPPSEVPLPAFFANK 142

Query: 175 HVSTIVDDSATRDLRRLLRLD 196
            V+      AT DL ++LRLD
Sbjct: 143 TVAGFKPTDATNDLIKILRLD 153

[Close]

BLAST of ClCG06G005610 vs. NCBI nr
Match: gi|659117291|ref|XP_008458522.1| (PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 187/200 (93.50%), Postives = 189/200 (94.50%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYN-YNSRSNRKSVARSER---PE 60
           MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+ N YN RSNRKSVARSER   PE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180
           VVCGTDRLGPAPE V KQIRIVDVRC IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           STIVDDSATRDLRRLLRLDA
Sbjct: 181 STIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of ClCG06G005610 vs. NCBI nr
Match: gi|449454444|ref|XP_004144965.1| (PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 8.4e-94
Identity = 185/200 (92.50%), Postives = 187/200 (93.50%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYN-YNSRSNRKSVARSERPE--- 60
           MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+ N YN RSNRKSVARSERPE   
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNL 120
           QRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180
           VVCGTDRLGPAPE V KQIRIVDVR  IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRSPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           S IVDDSATRDLRRLLRLDA
Sbjct: 181 SAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of ClCG06G005610 vs. NCBI nr
Match: gi|1009141820|ref|XP_015888392.1| (PREDICTED: uncharacterized protein LOC107423359 [Ziziphus jujuba])

HSP 1 Score: 241.9 bits (616), Expect = 9.4e-61
Identity = 144/210 (68.57%), Postives = 160/210 (76.19%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-----YNY-NSRSNRKS-----V 60
           MGTEILRPQDCLIERIRVPPA+  RR+S YGN + N      ++Y N R NRK      V
Sbjct: 1   MGTEILRPQDCLIERIRVPPASFYRRKSYYGNPNPNPNPNPNFHYSNPRPNRKQHHHQVV 60

Query: 61  ARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKS-EA 120
            RSE+ ++RK      SEPSVSKR+SS DL AMK    MEKVTILRRGESLDSKIKS E 
Sbjct: 61  LRSEKRDERKLQHRYGSEPSVSKRTSSGDLSAMKT---MEKVTILRRGESLDSKIKSSEG 120

Query: 121 LKKEGDN-LVVCGTDRLGPAPEMVPKQIRIVDVRCS--IAGKADVYAGSAFSMSPSPSSL 180
           LKKE D  LVVCGT+RLGP PEMVPKQ RIVD++    +AGK DVYAGSA ++SP+PSSL
Sbjct: 121 LKKESDGGLVVCGTERLGPDPEMVPKQTRIVDLKSPPVVAGKTDVYAGSACAVSPAPSSL 180

Query: 181 PLPSFSKKKHVSTIVDDSATRDLRRLLRLD 196
           PLPSFSKKK V  IVDDSATRDLRRLLRLD
Sbjct: 181 PLPSFSKKKQVFAIVDDSATRDLRRLLRLD 207

[Close]

BLAST of ClCG06G005610 vs. NCBI nr
Match: gi|590660466|ref|XP_007035407.1| (Uncharacterized protein TCM_021091 [Theobroma cacao])

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-58
Identity = 126/196 (64.29%), Postives = 154/196 (78.57%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKR 60
           MGTE+LRPQDCLIERIR  P A  RRR   G+++ + Y  N+ +N  +   + +P  RKR
Sbjct: 1   MGTEVLRPQDCLIERIRFAPTACSRRRYGNGSFNPSYYYNNNNNNSGNGRFNRKPAHRKR 60

Query: 61  FVSNHSEPSVSKRSSS-DDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120
                SE ++SKRSSS DDLK ++N++ MEKVT+LRRGESLDSKIKS +  +EG  LVV 
Sbjct: 61  ---TGSEQAISKRSSSADDLKTVRNNVTMEKVTLLRRGESLDSKIKSSSGGREG-GLVVT 120

Query: 121 GTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTI 180
           GTDRLGPAPEMVPKQI+IVD+R ++  K+DVYAGSAF++SP+PSSLPLPSFSKKK VS  
Sbjct: 121 GTDRLGPAPEMVPKQIKIVDIRSAVTAKSDVYAGSAFAVSPAPSSLPLPSFSKKKQVS-- 180

Query: 181 VDDSATRDLRRLLRLD 196
           +DDSATRDLRRLLRLD
Sbjct: 181 IDDSATRDLRRLLRLD 190

[Close]

BLAST of ClCG06G005610 vs. NCBI nr
Match: gi|703134599|ref|XP_010105678.1| (hypothetical protein L484_011289 [Morus notabilis])

HSP 1 Score: 225.7 bits (574), Expect = 7.0e-56
Identity = 129/206 (62.62%), Postives = 149/206 (72.33%), Query Frame = 1


Query: 1   MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVAR---SERPEQ 60
           M TE+LRP D L ERIRV PAA  RR+S YGN +S+  +YN+  N  S A    S RP  
Sbjct: 1   MATEVLRPHDWLTERIRVTPAAYSRRKSYYGNPNSSSNSYNNNFNSCSTANPRSSRRPAV 60

Query: 61  RKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSE---ALKKEGD 120
           R   +      S SKRSSSDDLKA+K    MEKVTILRRGESL+SKIKS    ALKKEG 
Sbjct: 61  RPERLPEQRRSSFSKRSSSDDLKAVKT---MEKVTILRRGESLESKIKSSGEAALKKEGG 120

Query: 121 NLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKK 180
           +LVVCG  RLGPAPEMVPK++ IVD+R  + G +DVYAGSAF++SP+PSSLPLPSFSKKK
Sbjct: 121 DLVVCGIQRLGPAPEMVPKRLGIVDLRVPVVGNSDVYAGSAFAVSPAPSSLPLPSFSKKK 180

Query: 181 H-----VSTIVDDSATRDLRRLLRLD 196
                  + IVDDSATRDLRRLLR+D
Sbjct: 181 QGPPSPAAVIVDDSATRDLRRLLRID 203

The following BLAST results are available for this feature:

BLAST of ClCG06G005610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCP9_CUCSA	5.9e-94	92.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G062315 PE=4 SV=1	[more]
A0A061ENV9_THECC	3.0e-58	64.29	Uncharacterized protein OS=Theobroma cacao GN=TCM_021091 PE=4 SV=1	[more]
W9RRZ8_9ROSA	4.9e-56	62.62	Uncharacterized protein OS=Morus notabilis GN=L484_011289 PE=4 SV=1	[more]
F6HDJ3_VITVI	8.3e-56	61.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02270 PE=4 SV=...	[more]
A0A0D2NN64_GOSRA	5.9e-54	64.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G074600 PE=4 SV=1	[more]

BLAST of ClCG06G005610 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32020.1	4.1e-14	31.34	unknown protein	[more]
AT3G21570.1	9.5e-11	68.63	unknown protein	[more]
AT2G25250.1	1.7e-07	30.50	unknown protein	[more]

BLAST of ClCG06G005610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117291\|ref\|XP_008458522.1\|	1.5e-95	93.50	PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo]	[more]
gi\|449454444\|ref\|XP_004144965.1\|	8.4e-94	92.50	PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus]	[more]
gi\|1009141820\|ref\|XP_015888392.1\|	9.4e-61	68.57	PREDICTED: uncharacterized protein LOC107423359 [Ziziphus jujuba]	[more]
gi\|590660466\|ref\|XP_007035407.1\|	4.4e-58	64.29	Uncharacterized protein TCM_021091 [Theobroma cacao]	[more]
gi\|703134599\|ref\|XP_010105678.1\|	7.0e-56	62.62	hypothetical protein L484_011289 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G005610.1	ClCG06G005610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 2..196 score: 2.5
None	No IPR available	PANTHER	PTHR33670:SF1	SUBFAMILY NOT NAMED	coord: 2..196 score: 2.5
None	No IPR available	PFAM	PF15365	PNRC	coord: 150..193 score: 6.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G005610	MELO3C021383	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G005610	Cla009356	Watermelon (97103) v1	wcgwmB344
ClCG06G005610	Cla97C06G115120	Watermelon (97103) v2	wcgwmbB273
ClCG06G005610	Bhi12G001574	Wax gourd	wcgwgoB492
ClCG06G005610	CSPI06G05210	Wild cucumber (PI 183967)	cpiwcgB508
ClCG06G005610	CmaCh17G002880	Cucurbita maxima (Rimu)	cmawcgB328
ClCG06G005610	CmaCh08G011880	Cucurbita maxima (Rimu)	cmawcgB804
ClCG06G005610	CmoCh08G011590	Cucurbita moschata (Rifu)	cmowcgB799
ClCG06G005610	CmoCh17G002770	Cucurbita moschata (Rifu)	cmowcgB325
ClCG06G005610	Lsi09G013780	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G005610	CsGy6G005160	Cucumber (Gy14) v2	cgybwcgB444
ClCG06G005610	MELO3C021383.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G005610	Carg15943	Silver-seed gourd	carwcgB0318
ClCG06G005610	Carg05470	Silver-seed gourd	carwcgB0073
ClCG06G005610	CsaV3_6G005540	Cucumber (Chinese Long) v3	cucwcgB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G005610	Wax gourd	wcgwgoB521
ClCG06G005610	Watermelon (Charleston Gray)	wcgwcgB160
ClCG06G005610	Cucumber (Gy14) v1	cgywcgB453
ClCG06G005610	Cucumber (Gy14) v1	cgywcgB619
ClCG06G005610	Cucurbita maxima (Rimu)	cmawcgB236
ClCG06G005610	Cucurbita maxima (Rimu)	cmawcgB745
ClCG06G005610	Cucurbita moschata (Rifu)	cmowcgB222
ClCG06G005610	Cucurbita moschata (Rifu)	cmowcgB746
ClCG06G005610	Wild cucumber (PI 183967)	cpiwcgB255
ClCG06G005610	Cucumber (Chinese Long) v2	cuwcgB247
ClCG06G005610	Cucumber (Chinese Long) v2	cuwcgB481
ClCG06G005610	Melon (DHL92) v3.5.1	mewcgB442
ClCG06G005610	Watermelon (97103) v1	wcgwmB332
ClCG06G005610	Cucurbita pepo (Zucchini)	cpewcgB144
ClCG06G005610	Cucurbita pepo (Zucchini)	cpewcgB294
ClCG06G005610	Cucurbita pepo (Zucchini)	cpewcgB562
ClCG06G005610	Cucurbita pepo (Zucchini)	cpewcgB788
ClCG06G005610	Bottle gourd (USVL1VR-Ls)	lsiwcgB345
ClCG06G005610	Cucumber (Gy14) v2	cgybwcgB230
ClCG06G005610	Melon (DHL92) v3.6.1	medwcgB437
ClCG06G005610	Silver-seed gourd	carwcgB0589
ClCG06G005610	Silver-seed gourd	carwcgB0808
ClCG06G005610	Cucumber (Chinese Long) v3	cucwcgB254
ClCG06G005610	Watermelon (97103) v2	wcgwmbB269