CmoCh08G011590 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGAAAATCTGCGGCTAGGTCGGATCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGAAAATCTGCGGCTAGGTCGGATCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGAAAATCTGCGGCTAGGTCGGATCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA
BLAST of CmoCh08G011590 vs. TrEMBL
Match: A0A0A0KCP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G062315 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 7.0e-79 Identity = 166/200 (83.00%), Postives = 171/200 (85.50%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TrEMBL
Match: W9RRZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011289 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.0e-46 Identity = 121/206 (58.74%), Postives = 143/206 (69.42%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TrEMBL
Match: T2DLD1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45 Identity = 123/197 (62.44%), Postives = 142/197 (72.08%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TrEMBL
Match: F6HDJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02270 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.7e-45 Identity = 113/199 (56.78%), Postives = 145/199 (72.86%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TrEMBL
Match: A0A0B2RWW3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007238 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45 Identity = 121/197 (61.42%), Postives = 138/197 (70.05%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TAIR10
Match: AT3G21570.1 (AT3G21570.1 unknown protein) HSP 1 Score: 76.3 bits (186), Expect = 2.4e-14 Identity = 70/199 (35.18%), Postives = 93/199 (46.73%), Query Frame = 1
BLAST of CmoCh08G011590 vs. TAIR10
Match: AT4G02040.1 (AT4G02040.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 9.2e-06 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 1
BLAST of CmoCh08G011590 vs. NCBI nr
Match: gi|659117291|ref|XP_008458522.1| (PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo]) HSP 1 Score: 307.4 bits (786), Expect = 1.8e-80 Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 1
BLAST of CmoCh08G011590 vs. NCBI nr
Match: gi|449454444|ref|XP_004144965.1| (PREDICTED: uncharacterized protein LOC101217755 [Cucumis sativus]) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78 Identity = 166/200 (83.00%), Postives = 171/200 (85.50%), Query Frame = 1
BLAST of CmoCh08G011590 vs. NCBI nr
Match: gi|1009141820|ref|XP_015888392.1| (PREDICTED: uncharacterized protein LOC107423359 [Ziziphus jujuba]) HSP 1 Score: 200.7 bits (509), Expect = 2.4e-48 Identity = 131/210 (62.38%), Postives = 147/210 (70.00%), Query Frame = 1
BLAST of CmoCh08G011590 vs. NCBI nr
Match: gi|1000971606|ref|XP_015573358.1| (PREDICTED: uncharacterized protein LOC107261088 [Ricinus communis]) HSP 1 Score: 192.6 bits (488), Expect = 6.6e-46 Identity = 131/220 (59.55%), Postives = 151/220 (68.64%), Query Frame = 1
BLAST of CmoCh08G011590 vs. NCBI nr
Match: gi|703134599|ref|XP_010105678.1| (hypothetical protein L484_011289 [Morus notabilis]) HSP 1 Score: 192.2 bits (487), Expect = 8.6e-46 Identity = 121/206 (58.74%), Postives = 143/206 (69.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |