Lsi09G010160 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G010160
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Basic helix-loop-helix DNA-binding superfamily protein
Location	chr09 : 14014301 .. 14016199 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAAGAAAAGAATGGCGTAAGAAAAAAGGAAATAGGGGAAGGAAAGAGGGTGGGTATGGGTACCACTAGACAACAAAGTCTATATATTTAGAGTGGTGGAAGGAAGGGAAGGATTGAGAAAGAAGAAAAATAAAGCCAAAAGTAGAAATCCAATACAAACCCAAACGAACAGAAACCATATCCGATCCCCTAATCCCAGATTCCGTCCATGGACAATGAAAGCTCTTAGCTTACTGATCTCAAGCAACTCAAAAGGATAAAAAAAATTACCCATCCTCGTCTTCATAAACCCCACAGCAAACAGGTCTGTCCTTATTCATTTAATTTCCTCTCAATCTTTGTATTATACGCTTTGTTTTTGGGGGTTTTTAGATTTTAGGTGATGTTTATTATTTTTATGGCTGTGTGTTTTGTAGTAGAGAGCTTAATTTGAGGTGGATATTACATTATGAAGGAGGAAGGAGAGTGTTTTGAAGAGCAGCTTGTAATGCAACAATTCCAAACGATGCAACAAAACGGCGACGTTTTCGGAGGAGGAGGGTTTATTTTTCCTGAGGTTTCTCCGTTGATGTTTCCGGCGACAACTGTGCATCAAGTCCACGGCTTCAACCCATTTTCTAATCCGACGATCCTAGACCACCACGACCCATTTCTCTCGCCGCCGCTGCCGCCAACCTCCTACGGCAGCTTCTTCAACAGAAGAAATGCTTCGTCTCTGCAGTTCCCTCCTTACGATAATGTTAGTTGTGCCCCATTTGAGCTGACCAAGATGACCGCTCAAGAAATAATGGACGCCAAAGCACTTGCAGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAACACCACTAAAGTAAGTTTTTATTCAATTCAATTAAATTAATACCATACTACTGCCTTAGTAATCCAAGATTTTACATGTTTTTTAAGCAAGAAACTGAGGTTAAGGAGGGATAAATAGATGCACTTGAATATCTTAATTAGATTGATACATCCGTAGCTAACATTTTACTTTGTATTTGTTTTTGCAGACGGACAAGGCGTCATTACTAGCAGAAGTAATCCAACATGTGAAAGAGCTGAAACGACAGACGACATTGATAGCCGACGTAAGTCTGCTGCCAACCGAGCTCGACGAGCTATCAGTGGATGTCGATGCATCGGACGAGGATGGGAAGTTCGTGATCAAAGCCTCGTTTTGTTGCGAGGACAGGTCTGATCTTTTGCCACAAATAATCAAAACCCTAAAATCCCTCCACCTGAGAACTTTAAAAGCGGAGATCATGACGCTCGGCGGCCGCGTAAGGAACGTATTGTTCATCACCGGCGACGAGGACTCCTCAAACGACCAACAAGATCAGGCTCAACAATACCAATACAGCATCAGTTCGATTCAGGAAGCCCTAAAAGGCGTGATGGAAAAGGTTTGTAGCGAAGACCAGTCGTCTTCAGGCAGCATTAAAAGACAAAGGACCAATAATCACAACAACATCAATATCATCCAACACAGGTCTTTCTAGCTATGTTATTTATCATTGTCTATATATCATCTTTGTTTTGGTGTGGCTTTCGTATGTACAATTATTATGTGTACTAGAGAGCAGTGATGAAAGGGATGCTTTTTCGTGTGGGAGATAAAAAAAACCTAACATGAAGATCAAAGATAGAAATTTTTGTTTCAAGTTTTGAAGTGATATGTATTATTTGTTACAGAAGGATCTTAATTTGGACTCTAATTTGCAGAGTGGTGTTTGGGTTTGTTTTGTAGCCAAGTAGATATGGCTGGCAGAGAGCTGATGCTTAATTATATAATATTATATATATATATATATTTTCTTTTTCCTTC

mRNA sequence

GACAAAGAAAAGAATGGCGTAAGAAAAAAGGAAATAGGGGAAGGAAAGAGGGTGGGTATGGGTACCACTAGACAACAAAGTCTATATATTTAGAGTGGTGGAAGGAAGGGAAGGATTGAGAAAGAAGAAAAATAAAGCCAAAAGTAGAAATCCAATACAAACCCAAACGAACAGAAACCATATCCGATCCCCTAATCCCAGATTCCGTCCATGGACAATGAAAGCTCTTAGCTTACTGATCTCAAGCAACTCAAAAGGATAAAAAAAATTACCCATCCTCGTCTTCATAAACCCCACAGCAAACAGTAGAGAGCTTAATTTGAGGTGGATATTACATTATGAAGGAGGAAGGAGAGTGTTTTGAAGAGCAGCTTGTAATGCAACAATTCCAAACGATGCAACAAAACGGCGACGTTTTCGGAGGAGGAGGGTTTATTTTTCCTGAGGTTTCTCCGTTGATGTTTCCGGCGACAACTGTGCATCAAGTCCACGGCTTCAACCCATTTTCTAATCCGACGATCCTAGACCACCACGACCCATTTCTCTCGCCGCCGCTGCCGCCAACCTCCTACGGCAGCTTCTTCAACAGAAGAAATGCTTCGTCTCTGCAGTTCCCTCCTTACGATAATGTTAGTTGTGCCCCATTTGAGCTGACCAAGATGACCGCTCAAGAAATAATGGACGCCAAAGCACTTGCAGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAACACCACTAAAACGGACAAGGCGTCATTACTAGCAGAAGTAATCCAACATGTGAAAGAGCTGAAACGACAGACGACATTGATAGCCGACGTAAGTCTGCTGCCAACCGAGCTCGACGAGCTATCAGTGGATGTCGATGCATCGGACGAGGATGGGAAGTTCGTGATCAAAGCCTCGTTTTGTTGCGAGGACAGGTCTGATCTTTTGCCACAAATAATCAAAACCCTAAAATCCCTCCACCTGAGAACTTTAAAAGCGGAGATCATGACGCTCGGCGGCCGCGTAAGGAACGTATTGTTCATCACCGGCGACGAGGACTCCTCAAACGACCAACAAGATCAGGCTCAACAATACCAATACAGCATCAGTTCGATTCAGGAAGCCCTAAAAGGCGTGATGGAAAAGGTTTGTAGCGAAGACCAGTCGTCTTCAGGCAGCATTAAAAGACAAAGGACCAATAATCACAACAACATCAATATCATCCAACACAGGTCTTTCTAGCTATGTTATTTATCATTGTCTATATATCATCTTTGTTTTGGTGTGGCTTTCGTATGTACAATTATTATGTGTACTAGAGAGCAGTGATGAAAGGGATGCTTTTTCGTGTGGGAGATAAAAAAAACCTAACATGAAGATCAAAGATAGAAATTTTTGTTTCAAGTTTTGAAGTGATATGTATTATTTGTTACAGAAGGATCTTAATTTGGACTCTAATTTGCAGAGTGGTGTTTGGGTTTGTTTTGTAGCCAAGTAGATATGGCTGGCAGAGAGCTGATGCTTAATTATATAATATTATATATATATATATATTTTCTTTTTCCTTC

Coding sequence (CDS)

ATGAAGGAGGAAGGAGAGTGTTTTGAAGAGCAGCTTGTAATGCAACAATTCCAAACGATGCAACAAAACGGCGACGTTTTCGGAGGAGGAGGGTTTATTTTTCCTGAGGTTTCTCCGTTGATGTTTCCGGCGACAACTGTGCATCAAGTCCACGGCTTCAACCCATTTTCTAATCCGACGATCCTAGACCACCACGACCCATTTCTCTCGCCGCCGCTGCCGCCAACCTCCTACGGCAGCTTCTTCAACAGAAGAAATGCTTCGTCTCTGCAGTTCCCTCCTTACGATAATGTTAGTTGTGCCCCATTTGAGCTGACCAAGATGACCGCTCAAGAAATAATGGACGCCAAAGCACTTGCAGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAACACCACTAAAACGGACAAGGCGTCATTACTAGCAGAAGTAATCCAACATGTGAAAGAGCTGAAACGACAGACGACATTGATAGCCGACGTAAGTCTGCTGCCAACCGAGCTCGACGAGCTATCAGTGGATGTCGATGCATCGGACGAGGATGGGAAGTTCGTGATCAAAGCCTCGTTTTGTTGCGAGGACAGGTCTGATCTTTTGCCACAAATAATCAAAACCCTAAAATCCCTCCACCTGAGAACTTTAAAAGCGGAGATCATGACGCTCGGCGGCCGCGTAAGGAACGTATTGTTCATCACCGGCGACGAGGACTCCTCAAACGACCAACAAGATCAGGCTCAACAATACCAATACAGCATCAGTTCGATTCAGGAAGCCCTAAAAGGCGTGATGGAAAAGGTTTGTAGCGAAGACCAGTCGTCTTCAGGCAGCATTAAAAGACAAAGGACCAATAATCACAACAACATCAATATCATCCAACACAGGTCTTTCTAG

Protein sequence

MKEEGECFEEQLVMQQFQTMQQNGDVFGGGGFIFPEVSPLMFPATTVHQVHGFNPFSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSCAPFELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRSF

Homology

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BLAST of Lsi09G010160 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.0e-69
Identity = 144/211 (68.25%), Postives = 176/211 (83.41%), Query Frame = 1


Query: 104 ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVI 163
           EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS+LPNTTKTDKASLLAEVI
Sbjct: 157 ELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVI 216

Query: 164 QHVKELKRQTTLIADVSLLPTELDELSVDVDASDE--DGKFVIKASFCCEDRSDLLPQII 223
           QHVKELKR+T++I++ +L+PTE DEL+V     +E  DG+FVIKAS CCEDRSDLLP +I
Sbjct: 217 QHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMI 276

Query: 224 KTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVM 283
           KTLK++ L+TLKAEI T+GGRV+NVLF+TG+E S  + ++     +Y I +I+EALK VM
Sbjct: 277 KTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE-----EYCIGTIEEALKAVM 336

Query: 284 EKVCSEDQSSSGSIKRQRTNNHNNINIIQHR 313
           EK   E+ SSSG+ KRQR ++HN I I++ +
Sbjct: 337 EKSNVEESSSSGNAKRQRMSSHNTITIVEQQ 362

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BLAST of Lsi09G010160 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-61
Identity = 158/340 (46.47%), Postives = 205/340 (60.29%), Query Frame = 1


Query: 1   MKEEGECFEEQLVMQQFQT---MQQNGDVFGGGGFIFPEVSPLMFPATTVHQ---VHGFN 60
           MKEE +C +    +Q +Q    +  +  +        P   PL FP+        VH FN
Sbjct: 4   MKEE-DCLQTFHNLQDYQDQFHLHHHPQILPWSSTSLPSFDPLHFPSNPTRYSDPVHYFN 63

Query: 61  --PFSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSCAPFE---LTKMT 120
               S+ +  D++D F+SPP  P+      + R  S    P     S   F+   + K++
Sbjct: 64  RRASSSSSSFDYNDGFVSPP--PSMDHPQNHLRILSEALGPIMRRGSSFGFDGEIMGKLS 123

Query: 121 AQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKEL 180
           AQE+MDAKALAASKSHSEAERRRRERIN HLAKLRS+LPNTTKTDKASLLAEVIQH+KEL
Sbjct: 124 AQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKEL 183

Query: 181 KRQTTLIADVSLLPTELDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHL 240
           KRQT+ I D   +PTE D+L+VD   +DE+G  VI+ASFCC+DR+DL+  +I  LKSL L
Sbjct: 184 KRQTSQITDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRL 243

Query: 241 RTLKAEIMTLGGRVRNVLFITGDEDSSNDQQ--------------DQAQQYQYSISSIQE 300
           RTLKAEI T+GGRV+N+LF++ + D   D                D+ +     +SSI+E
Sbjct: 244 RTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIEE 303

Query: 301 ALKGVMEKVCSE----------DQSSSGSIKRQRTNNHNN 306
           ALK V+EK              ++SSSG IKRQRT+   N
Sbjct: 304 ALKAVIEKCVHNNDESNDNNNLEKSSSGGIKRQRTSKMVN 340

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BLAST of Lsi09G010160 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 92/196 (46.94%), Postives = 133/196 (67.86%), Query Frame = 1


Query: 117 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQT--T 176
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 177 LIADVSLLPTELDELSV-DVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLK 236
             +D +LLP+E DE+SV        DG  + KAS CCEDRSDLLP +++ LKSL+++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 237 AEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVMEKVCSE--DQSS 296
           AE++T+GGR R+VL +  D++    +         S+  +Q ALK ++E+      ++SS
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE---------SVHFLQNALKSLLERSSKSLMERSS 242

Query: 297 SGS----IKRQRTNNH 304
            G      KR+R  +H
Sbjct: 243 GGGGGERSKRRRALDH 249

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BLAST of Lsi09G010160 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-31
Identity = 89/218 (40.83%), Postives = 132/218 (60.55%), Query Frame = 1


Query: 100 CAPFELTKMTAQE-----IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTD 159
           CA    T +T+       + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTD
Sbjct: 19  CASSTSTTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTD 78

Query: 160 KASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSV---DVDASDEDGKFVIKASFCCE 219
           K++LLA+V+Q VKELK+QT  I D   +P+E DE+SV   +  +  +D + + K SFCCE
Sbjct: 79  KSTLLAKVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCE 138

Query: 220 DRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSIS 279
           DR +LL  +++TLKSL + TL A++ T+GGR RNVL +  D++    Q         S++
Sbjct: 139 DRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQ---------SVN 198

Query: 280 SIQEALKGVMEKVCSEDQSSSGS------IKRQRTNNH 304
            +Q ALK ++E+         G       +KR+R  +H
Sbjct: 199 FLQNALKSLLERSSKSVMVGHGGGGGEERLKRRRALDH 226

[Close]

BLAST of Lsi09G010160 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.6e-24
Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 1


Query: 117 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLI 176
           KA + S+SH  AE+RRR+RIN+HL  LR L+PN+ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 177 ADVSLLPTELDELSVD----VDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTL 236
                LPTE DE++V      D        + KASFCCED+ + + +II+ L  L L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 237 KAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVMEKVCSEDQSSS 296
           +AEI+++GGR+R + FI  D + +      A     S  +++++L   + ++ S   ++S
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA-----SAKALKQSLCSALNRITSSSTTTS 238

Query: 297 G----SIKRQR 300
                  KRQR
Sbjct: 239 SVCRIRSKRQR 243

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BLAST of Lsi09G010160 vs. TrEMBL
Match: F6HF16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-96
Identity = 228/353 (64.59%), Postives = 259/353 (73.37%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQFQTMQQ-NGDVFGGGG----FIFPEVSPLMFPATTV 61
           +++GEC         ++EQL++QQ   MQQ N D +GGGG     IFPEVSP++ P  + 
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYGGGGGRSGLIFPEVSPILQP-WSF 66

Query: 62  HQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFP------------ 121
             VH FNP  F+   + DH DPFL PP PP++YGS FNRR A +LQF             
Sbjct: 67  PPVHAFNPAHFAANPVRDH-DPFLVPP-PPSAYGSVFNRR-APALQFAYEGPSSEHLRII 126

Query: 122 -----PYDNVSCAPF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR 181
                P      +PF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR
Sbjct: 127 SDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR 186

Query: 182 SLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKFVI 241
           SLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD SDEDGKFVI
Sbjct: 187 SLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDEDGKFVI 246

Query: 242 KASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSS----NDQQ 301
           KAS CCEDR+DLLP +IKTLK+L LRTLKAEI TLGGRV+NVLFITG+EDSS    N QQ
Sbjct: 247 KASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSGENQQQ 306

Query: 302 DQAQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            Q QQ QYSISSIQEALK VMEK    D+SSSGS+KRQRT    NINII+HRS
Sbjct: 307 QQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRT----NINIIEHRS 348

[Close]

BLAST of Lsi09G010160 vs. TrEMBL
Match: A0A0D2PX93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G186700 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 7.7e-96
Identity = 224/351 (63.82%), Postives = 258/351 (73.50%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQ----FQTMQQNGDVFGG--GGFIFPEVSPLMFPATT 61
           +++GEC         ++EQ+ MQQ     Q  Q N D+FGG  GG IFPEVSP++    +
Sbjct: 7   EDQGECSQAIHNIQGYQEQIYMQQQHQQMQQQQHNIDLFGGTRGGLIFPEVSPIL--PWS 66

Query: 62  VHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC---- 121
           +  +H FNP  F+   + D  DPFL PP PPTSYG  FNRR A SLQF  YD  S     
Sbjct: 67  LPPIHNFNPALFTGNPVRDD-DPFLVPP-PPTSYGGLFNRR-APSLQFA-YDGTSADHLR 126

Query: 122 --------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 181
                         APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK
Sbjct: 127 ILSDTLGPGVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 186

Query: 182 LRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKF 241
           LRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD S+EDGKF
Sbjct: 187 LRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSEEDGKF 246

Query: 242 VIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQ 301
           VIKAS CCEDRSDLLP +IKTLK+LHL+TLKAEI TLGGRV+NVLFITG+EDSS+  + Q
Sbjct: 247 VIKASLCCEDRSDLLPDLIKTLKALHLKTLKAEITTLGGRVKNVLFITGEEDSSSSGEQQ 306

Query: 302 AQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            QQ QY ISSIQEALK VMEK  S D+SSSG++KRQRT    NI+I++HRS
Sbjct: 307 QQQLQYCISSIQEALKAVMEKT-SVDESSSGNVKRQRT----NISILEHRS 344

[Close]

BLAST of Lsi09G010160 vs. TrEMBL
Match: A0A061EB14_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011873 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 223/351 (63.53%), Postives = 260/351 (74.07%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQFQTMQQ------NGDVFGG--GGFIFPEVSPLMFPA 61
           +++GEC         ++EQL++QQ Q MQQ      N D+FGG  GG IFPEVSP++   
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFGGTRGGLIFPEVSPIL--P 66

Query: 62  TTVHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC-- 121
            ++  VH FNP  F+   + DH DPFL PP PP+SYG+ FNRR A +LQF  YD  S   
Sbjct: 67  WSLPPVHSFNPAHFNGNQVRDH-DPFLVPP-PPSSYGALFNRR-APALQFA-YDGPSTDH 126

Query: 122 ----------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 181
                           APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHL
Sbjct: 127 LRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 186

Query: 182 AKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDG 241
           AKLRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD SDEDG
Sbjct: 187 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSDEDG 246

Query: 242 KFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQ 301
           KF+IKAS CCEDRSDLLP +IKTLK+L L+TLKAEI TLGGRV+NVLFITG+EDSS+   
Sbjct: 247 KFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDSSSSGD 306

Query: 302 DQAQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQH 312
            Q QQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRT    NI+I++H
Sbjct: 307 QQQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRT----NISILEH 344

[Close]

BLAST of Lsi09G010160 vs. TrEMBL
Match: A0A0B0N1U5_GOSAR (Transcription factor bHLH30-like protein OS=Gossypium arboreum GN=F383_03211 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.9e-95
Identity = 224/351 (63.82%), Postives = 257/351 (73.22%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQ----FQTMQQNGDVFGG--GGFIFPEVSPLMFPATT 61
           +++GEC         ++EQL MQQ     Q  Q N D+FGG  GG IFPEVSP++    +
Sbjct: 7   EDQGECSQTIHNIQGYQEQLYMQQQHQQMQQQQHNIDLFGGTRGGLIFPEVSPIL--PWS 66

Query: 62  VHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC---- 121
           +  +H FNP  F+   + D  DPFL PP PPTSYG  FNRR A SLQF  YD  S     
Sbjct: 67  LPPIHNFNPALFTGNPVRDD-DPFLVPP-PPTSYGGLFNRR-APSLQFA-YDGTSADHLR 126

Query: 122 --------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 181
                         APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK
Sbjct: 127 ILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 186

Query: 182 LRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKF 241
           LRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD S+EDGKF
Sbjct: 187 LRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSEEDGKF 246

Query: 242 VIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQ 301
           VIKAS CCEDRSDLLP +IKTLK+L L+TLKAEI TLGGRV+NVLFITG+EDSS+  + Q
Sbjct: 247 VIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDSSSSAEQQ 306

Query: 302 AQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            QQ QY ISSIQEALK VMEK  S D+SSSG++KRQRT    NI+I++HRS
Sbjct: 307 QQQLQYCISSIQEALKAVMEKT-SVDESSSGNVKRQRT----NISILEHRS 344

[Close]

BLAST of Lsi09G010160 vs. TrEMBL
Match: B9HWM2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010g PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.6e-93
Identity = 224/362 (61.88%), Postives = 259/362 (71.55%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQFQTMQQN-----GDVFGGG---GFIFPEVSPLMFPA 61
           +++GEC         ++EQL++Q  Q MQQ+      D++GG    GFIFPEVSP++   
Sbjct: 7   EDQGECSQTIHNLQNYQEQLLLQYHQQMQQHQQQQSSDIYGGARGSGFIFPEVSPIL--P 66

Query: 62  TTVHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFP----PYDNV 121
             +  VH FNP  F+    +  HDPFL PP  P+SYG  FNRR A SLQF     P D++
Sbjct: 67  WPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSYGGLFNRR-APSLQFAYDGTPSDHL 126

Query: 122 -------------SCAPF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLA 181
                          APF    EL+KMTAQEIMDAKALAASKSHSEAERRRRERINNHLA
Sbjct: 127 RIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHLA 186

Query: 182 KLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGK 241
           KLRSLLP+TTKTDKASLLAEVIQHVKELKRQTTLIA+ S +PTE+DEL+  VD +DEDGK
Sbjct: 187 KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVPTEMDELT--VDTADEDGK 246

Query: 242 FVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQD 301
           FVIKAS CCEDR DLLP +IKTLK+L LRTLKAEI TLGGRV+NVLFI+G+EDSS+D  D
Sbjct: 247 FVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFISGEEDSSSDSND 306

Query: 302 QAQQ---YQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINII-------QH 314
           Q QQ    QYSISSIQEALK VMEK    D+SSSGS+KRQRT    NIN++       QH
Sbjct: 307 QHQQQEPLQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRT----NINLLEQQQQQQQH 358

[Close]

BLAST of Lsi09G010160 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 263.1 bits (671), Expect = 2.2e-70
Identity = 144/211 (68.25%), Postives = 176/211 (83.41%), Query Frame = 1


Query: 104 ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVI 163
           EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS+LPNTTKTDKASLLAEVI
Sbjct: 157 ELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVI 216

Query: 164 QHVKELKRQTTLIADVSLLPTELDELSVDVDASDE--DGKFVIKASFCCEDRSDLLPQII 223
           QHVKELKR+T++I++ +L+PTE DEL+V     +E  DG+FVIKAS CCEDRSDLLP +I
Sbjct: 217 QHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMI 276

Query: 224 KTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVM 283
           KTLK++ L+TLKAEI T+GGRV+NVLF+TG+E S  + ++     +Y I +I+EALK VM
Sbjct: 277 KTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE-----EYCIGTIEEALKAVM 336

Query: 284 EKVCSEDQSSSGSIKRQRTNNHNNINIIQHR 313
           EK   E+ SSSG+ KRQR ++HN I I++ +
Sbjct: 337 EKSNVEESSSSGNAKRQRMSSHNTITIVEQQ 362

[Close]

BLAST of Lsi09G010160 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-62
Identity = 158/340 (46.47%), Postives = 205/340 (60.29%), Query Frame = 1


Query: 1   MKEEGECFEEQLVMQQFQT---MQQNGDVFGGGGFIFPEVSPLMFPATTVHQ---VHGFN 60
           MKEE +C +    +Q +Q    +  +  +        P   PL FP+        VH FN
Sbjct: 4   MKEE-DCLQTFHNLQDYQDQFHLHHHPQILPWSSTSLPSFDPLHFPSNPTRYSDPVHYFN 63

Query: 61  --PFSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSCAPFE---LTKMT 120
               S+ +  D++D F+SPP  P+      + R  S    P     S   F+   + K++
Sbjct: 64  RRASSSSSSFDYNDGFVSPP--PSMDHPQNHLRILSEALGPIMRRGSSFGFDGEIMGKLS 123

Query: 121 AQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKEL 180
           AQE+MDAKALAASKSHSEAERRRRERIN HLAKLRS+LPNTTKTDKASLLAEVIQH+KEL
Sbjct: 124 AQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKEL 183

Query: 181 KRQTTLIADVSLLPTELDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHL 240
           KRQT+ I D   +PTE D+L+VD   +DE+G  VI+ASFCC+DR+DL+  +I  LKSL L
Sbjct: 184 KRQTSQITDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRL 243

Query: 241 RTLKAEIMTLGGRVRNVLFITGDEDSSNDQQ--------------DQAQQYQYSISSIQE 300
           RTLKAEI T+GGRV+N+LF++ + D   D                D+ +     +SSI+E
Sbjct: 244 RTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIEE 303

Query: 301 ALKGVMEKVCSE----------DQSSSGSIKRQRTNNHNN 306
           ALK V+EK              ++SSSG IKRQRT+   N
Sbjct: 304 ALKAVIEKCVHNNDESNDNNNLEKSSSGGIKRQRTSKMVN 340

[Close]

BLAST of Lsi09G010160 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 8.0e-36
Identity = 92/196 (46.94%), Postives = 133/196 (67.86%), Query Frame = 1


Query: 117 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQT--T 176
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 177 LIADVSLLPTELDELSV-DVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLK 236
             +D +LLP+E DE+SV        DG  + KAS CCEDRSDLLP +++ LKSL+++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 237 AEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVMEKVCSE--DQSS 296
           AE++T+GGR R+VL +  D++    +         S+  +Q ALK ++E+      ++SS
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE---------SVHFLQNALKSLLERSSKSLMERSS 242

Query: 297 SGS----IKRQRTNNH 304
            G      KR+R  +H
Sbjct: 243 GGGGGERSKRRRALDH 249

[Close]

BLAST of Lsi09G010160 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 89/218 (40.83%), Postives = 132/218 (60.55%), Query Frame = 1


Query: 100 CAPFELTKMTAQE-----IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTD 159
           CA    T +T+       + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTD
Sbjct: 19  CASSTSTTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTD 78

Query: 160 KASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSV---DVDASDEDGKFVIKASFCCE 219
           K++LLA+V+Q VKELK+QT  I D   +P+E DE+SV   +  +  +D + + K SFCCE
Sbjct: 79  KSTLLAKVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCE 138

Query: 220 DRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSIS 279
           DR +LL  +++TLKSL + TL A++ T+GGR RNVL +  D++    Q         S++
Sbjct: 139 DRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQ---------SVN 198

Query: 280 SIQEALKGVMEKVCSEDQSSSGS------IKRQRTNNH 304
            +Q ALK ++E+         G       +KR+R  +H
Sbjct: 199 FLQNALKSLLERSSKSVMVGHGGGGGEERLKRRRALDH 226

[Close]

BLAST of Lsi09G010160 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 1


Query: 117 KALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLI 176
           KA + S+SH  AE+RRR+RIN+HL  LR L+PN+ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 177 ADVSLLPTELDELSVD----VDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTL 236
                LPTE DE++V      D        + KASFCCED+ + + +II+ L  L L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 237 KAEIMTLGGRVRNVLFITGDEDSSNDQQDQAQQYQYSISSIQEALKGVMEKVCSEDQSSS 296
           +AEI+++GGR+R + FI  D + +      A     S  +++++L   + ++ S   ++S
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA-----SAKALKQSLCSALNRITSSSTTTS 238

Query: 297 G----SIKRQR 300
                  KRQR
Sbjct: 239 SVCRIRSKRQR 243

[Close]

BLAST of Lsi09G010160 vs. NCBI nr
Match: gi|659114756|ref|XP_008457214.1| (PREDICTED: transcription factor bHLH30-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 2.1e-123
Identity = 261/320 (81.56%), Postives = 274/320 (85.62%), Query Frame = 1


Query: 1   MKEEGECFEEQLVMQQFQTMQQNGDVF--GGGGFIFPEVSPLMFPATTVHQVHGFNPFS- 60
           MKEEG+CFE+Q+VMQQ      NG+VF  GGGG  F EVSPLMFP+   HQV GFNPF  
Sbjct: 1   MKEEGDCFEDQIVMQQ------NGNVFVAGGGGSDFSEVSPLMFPS---HQVPGFNPFLF 60

Query: 61  NPTILDHHDPFL-SPPLPPTSYGSFFNRRNASSLQFPPYDN--VSCAPFELTKMTAQEIM 120
           NPT LD HDPF  SPP  P    SFFNRRN +++ FP YDN  V CAPFELTKMTAQEIM
Sbjct: 61  NPTTLDQHDPFNPSPPQLP----SFFNRRN-NNISFPYYDNNNVGCAPFELTKMTAQEIM 120

Query: 121 DAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTT 180
           DAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQT 
Sbjct: 121 DAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTM 180

Query: 181 LIADVSLLPTELDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKA 240
           LIAD SLLPTE+DELSVDVDASDEDGKFVIKASFCCEDRSDLLPQI KTLKSLHLRTLKA
Sbjct: 181 LIADASLLPTEVDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQITKTLKSLHLRTLKA 240

Query: 241 EIMTLGGRVRNVLFITGDEDSSND-QQDQAQQYQYSISSIQEALKGVMEKVCSEDQSSSG 300
           EI T GGRVRNVLFIT D DSSND QQD   Q+QYSISSIQEALKG+MEKVC E+Q SSG
Sbjct: 241 EITTFGGRVRNVLFITADNDSSNDQQQDHNPQHQYSISSIQEALKGMMEKVCREEQ-SSG 300

Query: 301 SIKRQRTNNHNNINIIQHRS 314
           SIKRQRTNNHNNINIIQ+RS
Sbjct: 301 SIKRQRTNNHNNINIIQNRS 305

[Close]

BLAST of Lsi09G010160 vs. NCBI nr
Match: gi|225423869|ref|XP_002278697.1| (PREDICTED: transcription factor bHLH30 [Vitis vinifera])

HSP 1 Score: 361.3 bits (926), Expect = 1.7e-96
Identity = 228/353 (64.59%), Postives = 259/353 (73.37%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQFQTMQQ-NGDVFGGGG----FIFPEVSPLMFPATTV 61
           +++GEC         ++EQL++QQ   MQQ N D +GGGG     IFPEVSP++ P  + 
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYGGGGGRSGLIFPEVSPILQP-WSF 66

Query: 62  HQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFP------------ 121
             VH FNP  F+   + DH DPFL PP PP++YGS FNRR A +LQF             
Sbjct: 67  PPVHAFNPAHFAANPVRDH-DPFLVPP-PPSAYGSVFNRR-APALQFAYEGPSSEHLRII 126

Query: 122 -----PYDNVSCAPF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR 181
                P      +PF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR
Sbjct: 127 SDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLR 186

Query: 182 SLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKFVI 241
           SLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD SDEDGKFVI
Sbjct: 187 SLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDEDGKFVI 246

Query: 242 KASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSS----NDQQ 301
           KAS CCEDR+DLLP +IKTLK+L LRTLKAEI TLGGRV+NVLFITG+EDSS    N QQ
Sbjct: 247 KASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSGENQQQ 306

Query: 302 DQAQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            Q QQ QYSISSIQEALK VMEK    D+SSSGS+KRQRT    NINII+HRS
Sbjct: 307 QQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRT----NINIIEHRS 348

[Close]

BLAST of Lsi09G010160 vs. NCBI nr
Match: gi|823211748|ref|XP_012438654.1| (PREDICTED: transcription factor bHLH30-like [Gossypium raimondii])

HSP 1 Score: 358.6 bits (919), Expect = 1.1e-95
Identity = 224/351 (63.82%), Postives = 258/351 (73.50%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQ----FQTMQQNGDVFGG--GGFIFPEVSPLMFPATT 61
           +++GEC         ++EQ+ MQQ     Q  Q N D+FGG  GG IFPEVSP++    +
Sbjct: 7   EDQGECSQAIHNIQGYQEQIYMQQQHQQMQQQQHNIDLFGGTRGGLIFPEVSPIL--PWS 66

Query: 62  VHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC---- 121
           +  +H FNP  F+   + D  DPFL PP PPTSYG  FNRR A SLQF  YD  S     
Sbjct: 67  LPPIHNFNPALFTGNPVRDD-DPFLVPP-PPTSYGGLFNRR-APSLQFA-YDGTSADHLR 126

Query: 122 --------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 181
                         APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK
Sbjct: 127 ILSDTLGPGVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 186

Query: 182 LRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKF 241
           LRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD S+EDGKF
Sbjct: 187 LRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSEEDGKF 246

Query: 242 VIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQ 301
           VIKAS CCEDRSDLLP +IKTLK+LHL+TLKAEI TLGGRV+NVLFITG+EDSS+  + Q
Sbjct: 247 VIKASLCCEDRSDLLPDLIKTLKALHLKTLKAEITTLGGRVKNVLFITGEEDSSSSGEQQ 306

Query: 302 AQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            QQ QY ISSIQEALK VMEK  S D+SSSG++KRQRT    NI+I++HRS
Sbjct: 307 QQQLQYCISSIQEALKAVMEKT-SVDESSSGNVKRQRT----NISILEHRS 344

[Close]

BLAST of Lsi09G010160 vs. NCBI nr
Match: gi|590701106|ref|XP_007046318.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 357.8 bits (917), Expect = 1.9e-95
Identity = 223/351 (63.53%), Postives = 260/351 (74.07%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQFQTMQQ------NGDVFGG--GGFIFPEVSPLMFPA 61
           +++GEC         ++EQL++QQ Q MQQ      N D+FGG  GG IFPEVSP++   
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFGGTRGGLIFPEVSPIL--P 66

Query: 62  TTVHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC-- 121
            ++  VH FNP  F+   + DH DPFL PP PP+SYG+ FNRR A +LQF  YD  S   
Sbjct: 67  WSLPPVHSFNPAHFNGNQVRDH-DPFLVPP-PPSSYGALFNRR-APALQFA-YDGPSTDH 126

Query: 122 ----------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 181
                           APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHL
Sbjct: 127 LRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 186

Query: 182 AKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDG 241
           AKLRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD SDEDG
Sbjct: 187 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSDEDG 246

Query: 242 KFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQ 301
           KF+IKAS CCEDRSDLLP +IKTLK+L L+TLKAEI TLGGRV+NVLFITG+EDSS+   
Sbjct: 247 KFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDSSSSGD 306

Query: 302 DQAQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQH 312
            Q QQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRT    NI+I++H
Sbjct: 307 QQQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRT----NISILEH 344

[Close]

BLAST of Lsi09G010160 vs. NCBI nr
Match: gi|728826119|gb|KHG06567.1| (Transcription factor bHLH30 -like protein [Gossypium arboreum])

HSP 1 Score: 356.7 bits (914), Expect = 4.2e-95
Identity = 224/351 (63.82%), Postives = 257/351 (73.22%), Query Frame = 1


Query: 2   KEEGEC---------FEEQLVMQQ----FQTMQQNGDVFGG--GGFIFPEVSPLMFPATT 61
           +++GEC         ++EQL MQQ     Q  Q N D+FGG  GG IFPEVSP++    +
Sbjct: 7   EDQGECSQTIHNIQGYQEQLYMQQQHQQMQQQQHNIDLFGGTRGGLIFPEVSPIL--PWS 66

Query: 62  VHQVHGFNP--FSNPTILDHHDPFLSPPLPPTSYGSFFNRRNASSLQFPPYDNVSC---- 121
           +  +H FNP  F+   + D  DPFL PP PPTSYG  FNRR A SLQF  YD  S     
Sbjct: 67  LPPIHNFNPALFTGNPVRDD-DPFLVPP-PPTSYGGLFNRR-APSLQFA-YDGTSADHLR 126

Query: 122 --------------APF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 181
                         APF    EL KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK
Sbjct: 127 ILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAK 186

Query: 182 LRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKF 241
           LRSLLP+TTKTDKASLLAEVIQHVKELKRQT+LIA+ S +PTE+DEL+  VD S+EDGKF
Sbjct: 187 LRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDTSEEDGKF 246

Query: 242 VIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEIMTLGGRVRNVLFITGDEDSSNDQQDQ 301
           VIKAS CCEDRSDLLP +IKTLK+L L+TLKAEI TLGGRV+NVLFITG+EDSS+  + Q
Sbjct: 247 VIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDSSSSAEQQ 306

Query: 302 AQQYQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNINIIQHRS 314
            QQ QY ISSIQEALK VMEK  S D+SSSG++KRQRT    NI+I++HRS
Sbjct: 307 QQQLQYCISSIQEALKAVMEKT-SVDESSSGNVKRQRT----NISILEHRS 344

The following BLAST results are available for this feature:

BLAST of Lsi09G010160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH030_ARATH	4.0e-69	68.25	Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1	[more]
BH032_ARATH	5.2e-61	46.47	Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1	[more]
BH106_ARATH	1.4e-34	46.94	Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1	[more]
BH107_ARATH	1.9e-31	40.83	Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV...	[more]
BH051_ARATH	8.6e-24	39.27	Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1	[more]

BLAST of Lsi09G010160 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HF16_VITVI	1.2e-96	64.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=...	[more]
A0A0D2PX93_GOSRA	7.7e-96	63.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G186700 PE=4 SV=1	[more]
A0A061EB14_THECC	1.3e-95	63.53	Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM...	[more]
A0A0B0N1U5_GOSAR	2.9e-95	63.82	Transcription factor bHLH30-like protein OS=Gossypium arboreum GN=F383_03211 PE=...	[more]
B9HWM2_POPTR	1.6e-93	61.88	Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010...	[more]

BLAST of Lsi09G010160 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68810.1	2.2e-70	68.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	2.9e-62	46.47	basic helix-loop-helix 32	[more]
AT2G41130.1	8.0e-36	46.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	1.1e-32	40.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G40200.1	4.9e-25	39.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Lsi09G010160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114756\|ref\|XP_008457214.1\|	2.1e-123	81.56	PREDICTED: transcription factor bHLH30-like [Cucumis melo]	[more]
gi\|225423869\|ref\|XP_002278697.1\|	1.7e-96	64.59	PREDICTED: transcription factor bHLH30 [Vitis vinifera]	[more]
gi\|823211748\|ref\|XP_012438654.1\|	1.1e-95	63.82	PREDICTED: transcription factor bHLH30-like [Gossypium raimondii]	[more]
gi\|590701106\|ref\|XP_007046318.1\|	1.9e-95	63.53	Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao]	[more]
gi\|728826119\|gb\|KHG06567.1\|	4.2e-95	63.82	Transcription factor bHLH30 -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G010160.1	Lsi09G010160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 124..181 score: 6.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 123..169 score: 1.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 126..175 score: 5.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 120..169 score: 17
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 124..174 score: 9.03
None	No IPR available	GENE3D	G3DSA:3.30.70.260		coord: 207..262 score: 3.
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 8..309 score: 1.2E
None	No IPR available	PANTHER	PTHR12565:SF139	SUBFAMILY NOT NAMED	coord: 8..309 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G010160	CmaCh04G020040	Cucurbita maxima (Rimu)	cmalsiB623
Lsi09G010160	CmoCh04G021090	Cucurbita moschata (Rifu)	cmolsiB618
Lsi09G010160	ClCG06G009690	Watermelon (Charleston Gray)	lsiwcgB030
Lsi09G010160	Cla97C06G119230	Watermelon (97103) v2	lsiwmbB027
Lsi09G010160	Cp4.1LG01g17700	Cucurbita pepo (Zucchini)	cpelsiB313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G010160	Wax gourd	lsiwgoB030
Lsi09G010160	Cucurbita moschata (Rifu)	cmolsiB257
Lsi09G010160	Cucurbita moschata (Rifu)	cmolsiB612