Cp4.1LG01g17700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix-loop-helix transcription factor
LocationCp4.1LG01 : 13150680 .. 13152649 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGCTTCGTCTATATATTTAGCGTAGTGGAAGGGTTGAAAAACCAAAGCTGCTCCTACCTTTGATCTCAACCAACTCAAACCCATCATCCTTTTCAAACTCCCACTGCCCACGCACCAACCAGATCTTAACCACAAGGGTTTTGTTTTTGGGATATTATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGACCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAATGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCATATGGGTCAGCCTGGGTCTTGCCCCTTTGGGCTGCAGGCCGAGCTCAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGACGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAGTAAGTTCTTTTTGTTCCTCAAATTAAACCCAAAAACAAATGGGATCAATTTCTTTACTTCAAAATCACTCCCAAATTGAGCTATTTTTTGTTTTGTATGTTATGGAATTTTCTAAAATCCAAGATTTTTATACATTTTTTTACTTTTTTTTTTCCACATGCGATATAAAATGGAAGCTCTTATTCAATCAATTTCGTTAAAATTGAATGAATTCATCTAATATATTTTCTACTATTCTCAAAGAAATCATTTTTACAATGTTTTTTGCAGACGGACAAGGCCTCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACGACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCCGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCCGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGGTTGAGAACCCTAAAAGCGGAGATCACGACGCTGGGCGGCCGAGTAAAGAACGTATTGTTTATCACTGGGGACGACGACTCGTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAGGAGCAGAGGTGGGTTTAAGTGTGACATAAAATTATGATATTTGTTAAAATAGTATGTTAAGTAAGTGTGTTAGGATTAAAAATGTGACATAAAATTATGATCTTTGTGTTTGGTGTGGCTTTCGTATGTACAATTATTATTATTATGTGTACTAGAGAGCAGTGGATGAGAAGGGAATGTAATGATGTTTGTGATGGAAAAGGGTAAGGATCTTTTTCGTGGGGAGGAAACCAAAATATGAGGATCGAAGATAGAAATTTGTGATTTTGAGTATTAGAAGTGAAATGAATGTGTATTGAGGTTACAGAAGGATCTGAGTTTGGTCCCAAATTTGCAGAGGGAGTTTGGGTTTGTTTTGTAGTCAAGTATGTGGCTGGCAGAGCAGCTTCTGTCTCTTTACAGTTTTTATTGGTGGGAATTATGTCATGGATGAGACAATGTTAACGACATCTAGTTTTGTCATATGTTCACAGAATTCTAGTGGACCAACAACCCAACTTTAAATTATTTTGTGTTGTTATTGTTGTAGTATGAACATATATATATATATATATACATATATATGC

mRNA sequence

GCTGCTTCGTCTATATATTTAGCGTAGTGGAAGGGTTGAAAAACCAAAGCTGCTCCTACCTTTGATCTCAACCAACTCAAACCCATCATCCTTTTCAAACTCCCACTGCCCACGCACCAACCAGATCTTAACCACAAGGGTTTTGTTTTTGGGATATTATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGACCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAATGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCATATGGGTCAGCCTGGGTCTTGCCCCTTTGGGCTGCAGGCCGAGCTCAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGACGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAACGGACAAGGCCTCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACGACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCCGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCCGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGGTTGAGAACCCTAAAAGCGGAGATCACGACGCTGGGCGGCCGAGTAAAGAACGTATTGTTTATCACTGGGGACGACGACTCGTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAGGAGCAGAGGTGGGTTTAAGTGTGACATAAAATTATGATATTTGTTAAAATAGTATGTTAAGTAAGTGTGTTAGGATTAAAAATGTGACATAAAATTATGATCTTTGTGTTTGGTGTGGCTTTCGTATGTACAATTATTATTATTATGTGTACTAGAGAGCAGTGGATGAGAAGGGAATGTAATGATGTTTGTGATGGAAAAGGGTAAGGATCTTTTTCGTGGGGAGGAAACCAAAATATGAGGATCGAAGATAGAAATTTGTGATTTTGAGTATTAGAAGTGAAATGAATGTGTATTGAGGTTACAGAAGGATCTGAGTTTGGTCCCAAATTTGCAGAGGGAGTTTGGGTTTGTTTTGTAGTCAAGTATGTGGCTGGCAGAGCAGCTTCTGTCTCTTTACAGTTTTTATTGGTGGGAATTATGTCATGGATGAGACAATGTTAACGACATCTAGTTTTGTCATATGTTCACAGAATTCTAGTGGACCAACAACCCAACTTTAAATTATTTTGTGTTGTTATTGTTGTAGTATGAACATATATATATATATATATACATATATATGC

Coding sequence (CDS)

ATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGACCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAATGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCATATGGGTCAGCCTGGGTCTTGCCCCTTTGGGCTGCAGGCCGAGCTCAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGACGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAACGGACAAGGCCTCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACGACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCCGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCCGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGGTTGAGAACCCTAAAAGCGGAGATCACGACGCTGGGCGGCCGAGTAAAGAACGTATTGTTTATCACTGGGGACGACGACTCGTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAG

Protein sequence

MKEEGECFQGFQDHLLMQQFQTMQQNSDVFGVGGGGGGGGGLIFPEVSPMMFTPPWTATTTIPQVHHDPFIPPPPPPSYASFFNRRNASLQFPYDIGNNSLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNVNI
Homology
[Close]
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.7e-78
Identity = 189/346 (54.62%), Postives = 232/346 (67.05%), Query Frame = 1 

Query: 9   QGFQDHLLMQQFQTMQQN-------SDVFGVGGGGGGGGGLIFPE-VSPMMFTPPWTATT 68
           Q +Q+ L   Q  +   +       S+  G  G  G G  +   + VSP+   PP T+  
Sbjct: 23  QNYQNDLFFHQLISHHHHHHHDPSQSETLGASGNVGSGFTIFSQDSVSPIWSLPPPTSI- 82

Query: 69  TIPQVHHDPFIPPPPPPS--YASFFNRRNA---SLQFPYD---------------IGNNS 128
              Q   D F PP   P+  Y SFFNR  A    LQF Y+               +   S
Sbjct: 83  ---QPPFDQFPPPSSSPASFYGSFFNRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILS 142

Query: 129 LGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS 188
             +G + Q GS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS
Sbjct: 143 EALGPVVQAGSGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS 202

Query: 189 LLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDE--DGKFV 248
           +LP+TTKTDKASLLAEVIQHVKELKR+T++I++ + VPTE DEL+V     +E  DG+FV
Sbjct: 203 ILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFV 262

Query: 249 IKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAE 308
           IKASLCCEDRSDLLP +IKTLK++RL+TLKAEITT+GGRVKNVLF+TG++ S  + EE  
Sbjct: 263 IKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE-- 322

Query: 309 QQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNVNI 325
               +Y I +I+EALK VMEK   E+ SSSG+ KRQR ++HN + I
Sbjct: 323 ----EYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTITI 358

[Close]
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.6e-57
Identity = 145/281 (51.60%), Postives = 185/281 (65.84%), Query Frame = 1 

Query: 66  HHDPFIPPPPPPSYASFFNRRNASLQFPYD-IGNNSLGIGHMGQPGSCPFGLQAEL-SKM 125
           ++D F+ PPP             S+  P + +   S  +G + + GS  FG   E+  K+
Sbjct: 74  YNDGFVSPPP-------------SMDHPQNHLRILSEALGPIMRRGSS-FGFDGEIMGKL 133

Query: 126 SAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKE 185
           SAQE+MDAKALAASKSHSEAERRRRERIN HLAKLRS+LP+TTKTDKASLLAEVIQH+KE
Sbjct: 134 SAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKE 193

Query: 186 LKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLR 245
           LKRQT+ I D   VPTE D+L+VD   +DE+G  VI+AS CC+DR+DL+  +I  LKSLR
Sbjct: 194 LKRQTSQITDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLR 253

Query: 246 LRTLKAEITTLGGRVKNVLFITGDDDSSSD-------------QEEAEQQQHQYSISSIQ 305
           LRTLKAEI T+GGRVKN+LF++ + D   D             ++  E++     +SSI+
Sbjct: 254 LRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIE 313

Query: 306 EALKGVMEKVCSE----------DQSSSGSIKRQRTNNHNN 322
           EALK V+EK              ++SSSG IKRQRT+   N
Sbjct: 314 EALKAVIEKCVHNNDESNDNNNLEKSSSGGIKRQRTSKMVN 340

[Close]
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 90/197 (45.69%), Postives = 130/197 (65.99%), Query Frame = 1 

Query: 132 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT--T 191
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 192 LIADVSPVPTELDELSV-DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLK 251
             +D + +P+E DE+SV        DG  + KASLCCEDRSDLLP +++ LKSL ++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 252 AEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE--DQS 311
           AE+ T+GGR ++VL +  D +    +          S+  +Q ALK ++E+      ++S
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE----------SVHFLQNALKSLLERSSKSLMERS 242

Query: 312 SSGS----IKRQRTNNH 320
           S G      KR+R  +H
Sbjct: 243 SGGGGGERSKRRRALDH 249

[Close]
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-30
Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1 

Query: 128 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQ 187
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 188 TTLIADVSPVPTELDELSV---DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRL 247
           T  I D   +P+E DE+SV   +  +  +D + + K S CCEDR +LL  +++TLKSL++
Sbjct: 97  TLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 248 RTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSED 307
            TL A++TT+GGR +NVL +  D +    Q          S++ +Q ALK ++E+     
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKEHHGVQ----------SVNFLQNALKSLLERSSKSV 216

Query: 308 QSSSGS------IKRQRTNNH 320
               G       +KR+R  +H
Sbjct: 217 MVGHGGGGGEERLKRRRALDH 226

[Close]
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.1e-21
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 1 

Query: 132 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLI 191
           KA + S+SH  AE+RRR+RIN+HL  LR L+P++ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 192 ADVSPVPTELDELSVD----VDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTL 251
                +PTE DE++V      D        + KAS CCED+ + + +II+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 252 KAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSS 311
           +AEI ++GGR++ + FI  D + +     A       S  +++++L   + ++ S   ++
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA------SAKALKQSLCSALNRITSSSTTT 238

Query: 312 SG----SIKRQR 316
           S       KRQR
Sbjct: 239 SSVCRIRSKRQR 243

[Close]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match: F6HF16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 6.5e-106
Identity = 234/346 (67.63%), Postives = 269/346 (77.75%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTMQQ-NSDVFGVGGGGGGGGGLIFPEVSPMMFTP 61
           +++GEC       QG+Q+ LL+QQ   MQQ N+D +G   GGGG  GLIFPEVSP++   
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYG---GGGGRSGLIFPEVSPIL--Q 66

Query: 62  PWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRNASLQFPYDIGNN- 121
           PW+     P VH              HDPF+ PPPP +Y S FNRR  +LQF Y+  ++ 
Sbjct: 67  PWS----FPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQFAYEGPSSE 126

Query: 122 -----SLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNH 181
                S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNH
Sbjct: 127 HLRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNH 186

Query: 182 LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDED 241
           LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD SDED
Sbjct: 187 LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDED 246

Query: 242 GKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS-- 301
           GKFVIKASLCCEDR+DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG++DSSS  
Sbjct: 247 GKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSG 306

Query: 302 -DQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
            +Q++ +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 ENQQQQQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 340

[Close]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match: B9SEI3_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-105
Identity = 241/353 (68.27%), Postives = 271/353 (76.77%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTM--QQNSDVFGVGGGGGGGGGLIFPEVSPMMFT 61
           +++GEC       QG+Q+ LL+QQ Q    QQ SD++G  G  GG  GLIFPEVSP++  
Sbjct: 7   EDQGECSQTIHNLQGYQEQLLLQQMQHQHQQQTSDMYG--GARGGSSGLIFPEVSPIL-- 66

Query: 62  PPWT---------ATTTIP--QVHH--------DPF-IPPPPPPSYASFFNRRNASLQFP 121
            PW          A T  P  QVHH        DPF IPPP P SY + FNRR  +LQF 
Sbjct: 67  -PWPLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFLIPPPVPSSYGNLFNRRAPALQFA 126

Query: 122 YDIGNNSLG--------IGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAER 181
           YD G++S          +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAER
Sbjct: 127 YD-GSSSHDHLRIITDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAER 186

Query: 182 RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELS 241
           RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+
Sbjct: 187 RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT 246

Query: 242 VDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFIT 301
             VDASDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFIT
Sbjct: 247 --VDASDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFIT 306

Query: 302 GDDDSSSD-QEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
           G++DSSS+  EE +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 GEEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEK-SGGDESSSGSVKRQRTN 350

[Close]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match: A0A061EB14_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011873 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 7.2e-105
Identity = 232/348 (66.67%), Postives = 268/348 (77.01%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTMQQ------NSDVFGVGGGGGGGGGLIFPEVSP 61
           +++GEC       QG+Q+ LL+QQ Q MQQ      N+D+FG     G  GGLIFPEVSP
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFG-----GTRGGLIFPEVSP 66

Query: 62  MMFTPPWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRNASLQFPYD 121
           ++   PW+    +P VH              HDPF+ PPPP SY + FNRR  +LQF YD
Sbjct: 67  IL---PWS----LPPVHSFNPAHFNGNQVRDHDPFLVPPPPSSYGALFNRRAPALQFAYD 126

Query: 122 IGNN------SLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRE 181
             +       S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRE
Sbjct: 127 GPSTDHLRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRE 186

Query: 182 RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVD 241
           RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD
Sbjct: 187 RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VD 246

Query: 242 ASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDD 301
            SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRL+TLKAEITTLGGRVKNVLFITG++D
Sbjct: 247 TSDEDGKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEED 306

Query: 302 SSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
           SSS  ++ +QQQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRTN
Sbjct: 307 SSSSGDQ-QQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRTN 338

[Close]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match: A0A067KC07_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18280 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.1e-104
Identity = 237/356 (66.57%), Postives = 269/356 (75.56%), Query Frame = 1 

Query: 4   EGEC------FQGFQDHLLMQQFQTMQQ-NSDV-FGVGGGGGGGGGLIFPEVSPMMFTPP 63
           +GEC      FQ +Q+  L+QQ Q     N+DV +G GGGGG G GLIFPEVSP++   P
Sbjct: 11  QGECSQNIHNFQDYQEQFLLQQMQQQHNTNNDVIYGGGGGGGRGSGLIFPEVSPIL---P 70

Query: 64  WTATTTIPQVH----------------HDPFIPPPPPPS-YASFFNRRNAS--LQFPYD- 123
           W+    +P VH                HDPF+ PPP PS Y SFFNRR+AS  LQF YD 
Sbjct: 71  WS----LPPVHSFNPTHFNPNPVRDHQHDPFLIPPPLPSPYGSFFNRRSASPALQFAYDG 130

Query: 124 ---------IGNNSLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 183
                    I +++LG     QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 131 ASTNDHHLRIFSDTLGPVLHHQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 190

Query: 184 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 243
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IA+ SPVPTE+DEL+V
Sbjct: 191 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTEMDELTV 250

Query: 244 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 303
           D   SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 251 DTSESDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 310

Query: 304 DDDSSSDQEEAE-QQQH-QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHN 321
           ++DSSS+  +++ Q QH QYSI+SIQEALK VMEK    D SSS S+KRQRT N N
Sbjct: 311 EEDSSSNTNDSQNQHQHQQYSITSIQEALKAVMEK-SGADDSSSASVKRQRTTNIN 358

[Close]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match: B9HWM2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010g PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 232/344 (67.44%), Postives = 259/344 (75.29%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTMQQN-----SDVFGVGGGGGGGGGLIFPEVSPM 61
           +++GEC       Q +Q+ LL+Q  Q MQQ+     SD++G    G  G G IFPEVSP+
Sbjct: 7   EDQGECSQTIHNLQNYQEQLLLQYHQQMQQHQQQQSSDIYG----GARGSGFIFPEVSPI 66

Query: 62  MFTP--------PWTATTTIPQVHHDPF-IPPPPPPSYASFFNRRNASLQFPYD------ 121
           +  P        P   T   P   HDPF IPPP P SY   FNRR  SLQF YD      
Sbjct: 67  LPWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSYGGLFNRRAPSLQFAYDGTPSDH 126

Query: 122 IGNNSLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHL 181
           +   S  +G + QPGS PFGLQAELSKM+AQEIMDAKALAASKSHSEAERRRRERINNHL
Sbjct: 127 LRIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 186

Query: 182 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDG 241
           AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIA+ SPVPTE+DEL+  VD +DEDG
Sbjct: 187 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVPTEMDELT--VDTADEDG 246

Query: 242 KFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQE 301
           KFVIKASLCCEDR DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFI+G++DSSSD  
Sbjct: 247 KFVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFISGEEDSSSDSN 306

Query: 302 EAEQQQH--QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
           +  QQQ   QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 DQHQQQEPLQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 343

[Close]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-79
Identity = 189/346 (54.62%), Postives = 232/346 (67.05%), Query Frame = 1 

Query: 9   QGFQDHLLMQQFQTMQQN-------SDVFGVGGGGGGGGGLIFPE-VSPMMFTPPWTATT 68
           Q +Q+ L   Q  +   +       S+  G  G  G G  +   + VSP+   PP T+  
Sbjct: 23  QNYQNDLFFHQLISHHHHHHHDPSQSETLGASGNVGSGFTIFSQDSVSPIWSLPPPTSI- 82

Query: 69  TIPQVHHDPFIPPPPPPS--YASFFNRRNA---SLQFPYD---------------IGNNS 128
              Q   D F PP   P+  Y SFFNR  A    LQF Y+               +   S
Sbjct: 83  ---QPPFDQFPPPSSSPASFYGSFFNRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILS 142

Query: 129 LGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS 188
             +G + Q GS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS
Sbjct: 143 EALGPVVQAGSGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRS 202

Query: 189 LLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDE--DGKFV 248
           +LP+TTKTDKASLLAEVIQHVKELKR+T++I++ + VPTE DEL+V     +E  DG+FV
Sbjct: 203 ILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFV 262

Query: 249 IKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAE 308
           IKASLCCEDRSDLLP +IKTLK++RL+TLKAEITT+GGRVKNVLF+TG++ S  + EE  
Sbjct: 263 IKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE-- 322

Query: 309 QQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNVNI 325
               +Y I +I+EALK VMEK   E+ SSSG+ KRQR ++HN + I
Sbjct: 323 ----EYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTITI 358

[Close]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 224.6 bits (571), Expect = 9.1e-59
Identity = 145/281 (51.60%), Postives = 185/281 (65.84%), Query Frame = 1 

Query: 66  HHDPFIPPPPPPSYASFFNRRNASLQFPYD-IGNNSLGIGHMGQPGSCPFGLQAEL-SKM 125
           ++D F+ PPP             S+  P + +   S  +G + + GS  FG   E+  K+
Sbjct: 74  YNDGFVSPPP-------------SMDHPQNHLRILSEALGPIMRRGSS-FGFDGEIMGKL 133

Query: 126 SAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKE 185
           SAQE+MDAKALAASKSHSEAERRRRERIN HLAKLRS+LP+TTKTDKASLLAEVIQH+KE
Sbjct: 134 SAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKE 193

Query: 186 LKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLR 245
           LKRQT+ I D   VPTE D+L+VD   +DE+G  VI+AS CC+DR+DL+  +I  LKSLR
Sbjct: 194 LKRQTSQITDTYQVPTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLR 253

Query: 246 LRTLKAEITTLGGRVKNVLFITGDDDSSSD-------------QEEAEQQQHQYSISSIQ 305
           LRTLKAEI T+GGRVKN+LF++ + D   D             ++  E++     +SSI+
Sbjct: 254 LRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIE 313

Query: 306 EALKGVMEKVCSE----------DQSSSGSIKRQRTNNHNN 322
           EALK V+EK              ++SSSG IKRQRT+   N
Sbjct: 314 EALKAVIEKCVHNNDESNDNNNLEKSSSGGIKRQRTSKMVN 340

[Close]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 90/197 (45.69%), Postives = 130/197 (65.99%), Query Frame = 1 

Query: 132 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT--T 191
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 192 LIADVSPVPTELDELSV-DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLK 251
             +D + +P+E DE+SV        DG  + KASLCCEDRSDLLP +++ LKSL ++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 252 AEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE--DQS 311
           AE+ T+GGR ++VL +  D +    +          S+  +Q ALK ++E+      ++S
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE----------SVHFLQNALKSLLERSSKSLMERS 242

Query: 312 SSGS----IKRQRTNNH 320
           S G      KR+R  +H
Sbjct: 243 SGGGGGERSKRRRALDH 249

[Close]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1 

Query: 128 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQ 187
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 188 TTLIADVSPVPTELDELSV---DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRL 247
           T  I D   +P+E DE+SV   +  +  +D + + K S CCEDR +LL  +++TLKSL++
Sbjct: 97  TLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 248 RTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSED 307
            TL A++TT+GGR +NVL +  D +    Q          S++ +Q ALK ++E+     
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKEHHGVQ----------SVNFLQNALKSLLERSSKSV 216

Query: 308 QSSSGS------IKRQRTNNH 320
               G       +KR+R  +H
Sbjct: 217 MVGHGGGGGEERLKRRRALDH 226

[Close]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 1 

Query: 132 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLI 191
           KA + S+SH  AE+RRR+RIN+HL  LR L+P++ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 192 ADVSPVPTELDELSVD----VDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTL 251
                +PTE DE++V      D        + KAS CCED+ + + +II+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 252 KAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSS 311
           +AEI ++GGR++ + FI  D + +     A       S  +++++L   + ++ S   ++
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA------SAKALKQSLCSALNRITSSSTTT 238

Query: 312 SG----SIKRQR 316
           S       KRQR
Sbjct: 239 SSVCRIRSKRQR 243

[Close]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match: gi|225423869|ref|XP_002278697.1| (PREDICTED: transcription factor bHLH30 [Vitis vinifera])

HSP 1 Score: 392.1 bits (1006), Expect = 9.3e-106
Identity = 234/346 (67.63%), Postives = 269/346 (77.75%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTMQQ-NSDVFGVGGGGGGGGGLIFPEVSPMMFTP 61
           +++GEC       QG+Q+ LL+QQ   MQQ N+D +G   GGGG  GLIFPEVSP++   
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYG---GGGGRSGLIFPEVSPIL--Q 66

Query: 62  PWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRNASLQFPYDIGNN- 121
           PW+     P VH              HDPF+ PPPP +Y S FNRR  +LQF Y+  ++ 
Sbjct: 67  PWS----FPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQFAYEGPSSE 126

Query: 122 -----SLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNH 181
                S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNH
Sbjct: 127 HLRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNH 186

Query: 182 LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDED 241
           LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD SDED
Sbjct: 187 LAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDED 246

Query: 242 GKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS-- 301
           GKFVIKASLCCEDR+DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG++DSSS  
Sbjct: 247 GKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSG 306

Query: 302 -DQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
            +Q++ +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 ENQQQQQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 340

[Close]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match: gi|255566837|ref|XP_002524402.1| (PREDICTED: transcription factor bHLH30 [Ricinus communis])

HSP 1 Score: 389.8 bits (1000), Expect = 4.6e-105
Identity = 241/353 (68.27%), Postives = 271/353 (76.77%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTM--QQNSDVFGVGGGGGGGGGLIFPEVSPMMFT 61
           +++GEC       QG+Q+ LL+QQ Q    QQ SD++G  G  GG  GLIFPEVSP++  
Sbjct: 7   EDQGECSQTIHNLQGYQEQLLLQQMQHQHQQQTSDMYG--GARGGSSGLIFPEVSPIL-- 66

Query: 62  PPWT---------ATTTIP--QVHH--------DPF-IPPPPPPSYASFFNRRNASLQFP 121
            PW          A T  P  QVHH        DPF IPPP P SY + FNRR  +LQF 
Sbjct: 67  -PWPLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFLIPPPVPSSYGNLFNRRAPALQFA 126

Query: 122 YDIGNNSLG--------IGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAER 181
           YD G++S          +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAER
Sbjct: 127 YD-GSSSHDHLRIITDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAER 186

Query: 182 RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELS 241
           RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+
Sbjct: 187 RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT 246

Query: 242 VDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFIT 301
             VDASDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFIT
Sbjct: 247 --VDASDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFIT 306

Query: 302 GDDDSSSD-QEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
           G++DSSS+  EE +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 GEEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEK-SGGDESSSGSVKRQRTN 350

[Close]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match: gi|590701106|ref|XP_007046318.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 388.7 bits (997), Expect = 1.0e-104
Identity = 232/348 (66.67%), Postives = 268/348 (77.01%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQDHLLMQQFQTMQQ------NSDVFGVGGGGGGGGGLIFPEVSP 61
           +++GEC       QG+Q+ LL+QQ Q MQQ      N+D+FG     G  GGLIFPEVSP
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFG-----GTRGGLIFPEVSP 66

Query: 62  MMFTPPWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRNASLQFPYD 121
           ++   PW+    +P VH              HDPF+ PPPP SY + FNRR  +LQF YD
Sbjct: 67  IL---PWS----LPPVHSFNPAHFNGNQVRDHDPFLVPPPPSSYGALFNRRAPALQFAYD 126

Query: 122 IGNN------SLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRE 181
             +       S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRE
Sbjct: 127 GPSTDHLRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRE 186

Query: 182 RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVD 241
           RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD
Sbjct: 187 RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VD 246

Query: 242 ASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDD 301
            SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRL+TLKAEITTLGGRVKNVLFITG++D
Sbjct: 247 TSDEDGKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEED 306

Query: 302 SSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 318
           SSS  ++ +QQQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRTN
Sbjct: 307 SSSSGDQ-QQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRTN 338

[Close]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match: gi|802680781|ref|XP_012082021.1| (PREDICTED: transcription factor bHLH30-like [Jatropha curcas])

HSP 1 Score: 385.6 bits (989), Expect = 8.7e-104
Identity = 237/356 (66.57%), Postives = 269/356 (75.56%), Query Frame = 1 

Query: 4   EGEC------FQGFQDHLLMQQFQTMQQ-NSDV-FGVGGGGGGGGGLIFPEVSPMMFTPP 63
           +GEC      FQ +Q+  L+QQ Q     N+DV +G GGGGG G GLIFPEVSP++   P
Sbjct: 11  QGECSQNIHNFQDYQEQFLLQQMQQQHNTNNDVIYGGGGGGGRGSGLIFPEVSPIL---P 70

Query: 64  WTATTTIPQVH----------------HDPFIPPPPPPS-YASFFNRRNAS--LQFPYD- 123
           W+    +P VH                HDPF+ PPP PS Y SFFNRR+AS  LQF YD 
Sbjct: 71  WS----LPPVHSFNPTHFNPNPVRDHQHDPFLIPPPLPSPYGSFFNRRSASPALQFAYDG 130

Query: 124 ---------IGNNSLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 183
                    I +++LG     QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 131 ASTNDHHLRIFSDTLGPVLHHQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 190

Query: 184 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 243
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IA+ SPVPTE+DEL+V
Sbjct: 191 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTEMDELTV 250

Query: 244 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 303
           D   SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 251 DTSESDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 310

Query: 304 DDDSSSDQEEAE-QQQH-QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHN 321
           ++DSSS+  +++ Q QH QYSI+SIQEALK VMEK    D SSS S+KRQRT N N
Sbjct: 311 EEDSSSNTNDSQNQHQHQQYSITSIQEALKAVMEK-SGADDSSSASVKRQRTTNIN 358

[Close]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match: gi|659114756|ref|XP_008457214.1| (PREDICTED: transcription factor bHLH30-like [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.8e-102
Identity = 230/332 (69.28%), Postives = 252/332 (75.90%), Query Frame = 1 

Query: 1   MKEEGECFQGFQDHLLMQQFQTMQQNSDVFGVGGGGGGGGGLIFPEVSPMMF-------- 60
           MKEEG+CF+   D ++MQQ      N +VF  GGGG       F EVSP+MF        
Sbjct: 1   MKEEGDCFE---DQIVMQQ------NGNVFVAGGGGSD-----FSEVSPLMFPSHQVPGF 60

Query: 61  TPPWTATTTIPQVHHDPFIPPPPPPSYASFFNRRNASLQFPYDIGNNSLGIGHMGQPGSC 120
            P     TT+ Q  HDPF   P PP   SFFNRRN ++ FPY   NN          G  
Sbjct: 61  NPFLFNPTTLDQ--HDPF--NPSPPQLPSFFNRRNNNISFPYYDNNNV---------GCA 120

Query: 121 PFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKAS 180
           PF    EL+KM+AQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLP+TTKTDKAS
Sbjct: 121 PF----ELTKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKAS 180

Query: 181 LLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLL 240
           LLAEVIQHVKELKRQT LIAD S +PTE+DELSVDVDASDEDGKFVIKAS CCEDRSDLL
Sbjct: 181 LLAEVIQHVKELKRQTMLIADASLLPTEVDELSVDVDASDEDGKFVIKASFCCEDRSDLL 240

Query: 241 PQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEA 300
           PQI KTLKSL LRTLKAEITT GGRV+NVLFIT D+DSS+DQ++    QHQYSISSIQEA
Sbjct: 241 PQITKTLKSLHLRTLKAEITTFGGRVRNVLFITADNDSSNDQQQDHNPQHQYSISSIQEA 300

Query: 301 LKGVMEKVCSEDQSSSGSIKRQRTNNHNNVNI 325
           LKG+MEKVC E+Q SSGSIKRQRTNNHNN+NI
Sbjct: 301 LKGMMEKVCREEQ-SSGSIKRQRTNNHNNINI 300

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH030_ARATH3.7e-7854.62Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH1.6e-5751.60Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH106_ARATH2.3e-3245.69Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BH107_ARATH2.9e-3041.79Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH051_ARATH4.1e-2136.98Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
BLAST of Cp4.1LG01g17700 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HF16_VITVI6.5e-10667.63Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=... [more]
B9SEI3_RICCO3.2e-10568.27DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1[more]
A0A061EB14_THECC7.2e-10566.67Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
A0A067KC07_JATCU6.1e-10466.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18280 PE=4 SV=1[more]
B9HWM2_POPTR2.0e-10267.44Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010... [more]
BLAST of Cp4.1LG01g17700 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68810.12.1e-7954.62 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G25710.19.1e-5951.60 basic helix-loop-helix 32[more]
AT2G41130.11.3e-3345.69 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G56770.11.6e-3141.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G40200.12.3e-2236.98 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Cp4.1LG01g17700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|225423869|ref|XP_002278697.1|9.3e-10667.63PREDICTED: transcription factor bHLH30 [Vitis vinifera][more]
gi|255566837|ref|XP_002524402.1|4.6e-10568.27PREDICTED: transcription factor bHLH30 [Ricinus communis][more]
gi|590701106|ref|XP_007046318.1|1.0e-10466.67Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
gi|802680781|ref|XP_012082021.1|8.7e-10466.57PREDICTED: transcription factor bHLH30-like [Jatropha curcas][more]
gi|659114756|ref|XP_008457214.1|2.8e-10269.28PREDICTED: transcription factor bHLH30-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17700.1Cp4.1LG01g17700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 139..192
score: 6.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 138..184
score: 7.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 141..190
score: 7.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 135..184
score: 16
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 139..189
score: 1.7
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 222..278
score: 3.
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 9..298
score: 2.2E
NoneNo IPR availablePANTHERPTHR12565:SF139SUBFAMILY NOT NAMEDcoord: 9..298
score: 2.2E