CmoCh04G021090 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G021090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBasic helix-loop-helix DNA-binding superfamily protein
LocationCmo_Chr04 : 13557420 .. 13559402 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGGGGCGCCTATGGATGCTGCGTCGTCTATATATTTAGCGTAGTGGAAGGGTTGAAAAACCAAAGCTGCTCCTACCTTTGATCTCAACCAACTCAAACCCATCATCCTTTTCAAACTCCCACTGCCCACGCACCAACCAGATCTTAACCACAAGGGTTTTGTTTTTGGGGTATTATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGAGCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAGTGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCAGATGGGTCAGCCTGGGTCTGGCCCCTTTGGCCTGCAGGCCGAGCTGAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAGTAAGTTCTTTTTGTTCCTCAAATTAAACCCAAAAACAAATGGAAACAATTTCTTTACTTCAAAATCACTCCCAAATTGAGCTATTTTTTGTTTTGTATGTTATGGAATTTTCTAAAATCCAAGATTTTTATACATTTTTTTTTTTTTTTTTCCACATGCGATATAAAATGGAAGCTCTTATTCAATCAATTTCATTAAAATTGAATAAATTCATCTAATATATTTTCTACTATTCTCAAAGAAATCATTTTTACAATGTTTTTTGCAGACGGACAAGGCATCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACCACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCGGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCTGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGCTTGAGAACCCTAAAAGCGGAGATCACGACACTGGGCGGCCGAGTAAAGAACGTACTGTTTATCACCGGGGACGACGACTCCTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAGGAGGAGAGGTGGGTTTAAGTGTGACATAAAATTATGATATTTGTTAAAATAGTATGTTAAGTGTGTTAGGATTAAAAATGTGACATAAAATTATGATCTTTGTTTTGGTGTGGCTTTCGTATGTACAATTATTATTATTATGTGTACTAGAGAGCAGTGGATGAGAAGGGAATGTAATGATGTTTGTGATGGAAAAGGGTAAGGATCTTTTTCGTGGGGAGGAAACCAAAATATGAGGATCGAAGATAGAAATTTGTGATTTTGAGTATTAGAAGTGAAATGAATGTGTATTGAGGTTTCAGAAGGATCTGAGTTTGGTCCCAAATTTGCAGAGGGAGTTTGGGTTTGTTTTGTAGTCAAGTGTGTGGCTGGCAGAGCAGCTGCTGTCTCTTTACAGTTTTTATTGGTGGGAATTATGTCATGGATGAGACAATGTTAACGACATCTAGGTTTGTCATATGTTCACAGAATTCTAGTGGACCAACAACCCAACTTTAAATTATTTTGTGTTGTTATTGTTGTAGTATGAATATATATATATATATATGCTTCAGTTTATGTGTCT

mRNA sequence

AAAGGGGGCGCCTATGGATGCTGCGTCGTCTATATATTTAGCGTAGTGGAAGGGTTGAAAAACCAAAGCTGCTCCTACCTTTGATCTCAACCAACTCAAACCCATCATCCTTTTCAAACTCCCACTGCCCACGCACCAACCAGATCTTAACCACAAGGGTTTTGTTTTTGGGGTATTATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGAGCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAGTGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCAGATGGGTCAGCCTGGGTCTGGCCCCTTTGGCCTGCAGGCCGAGCTGAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAACGGACAAGGCATCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACCACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCGGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCTGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGCTTGAGAACCCTAAAAGCGGAGATCACGACACTGGGCGGCCGAGTAAAGAACGTACTGTTTATCACCGGGGACGACGACTCCTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAGGAGGAGAGGTGGGTTTAAGTGTGACATAAAATTATGATATTTGTTAAAATAGTATGTTAAGTGTGTTAGGATTAAAAATGTGACATAAAATTATGATCTTTGTTTTGGTGTGGCTTTCGTATGTACAATTATTATTATTATGTGTACTAGAGAGCAGTGGATGAGAAGGGAATGTAATGATGTTTGTGATGGAAAAGGGTAAGGATCTTTTTCGTGGGGAGGAAACCAAAATATGAGGATCGAAGATAGAAATTTGTGATTTTGAGTATTAGAAGTGAAATGAATGTGTATTGAGGTTTCAGAAGGATCTGAGTTTGGTCCCAAATTTGCAGAGGGAGTTTGGGTTTGTTTTGTAGTCAAGTGTGTGGCTGGCAGAGCAGCTGCTGTCTCTTTACAGTTTTTATTGGTGGGAATTATGTCATGGATGAGACAATGTTAACGACATCTAGGTTTGTCATATGTTCACAGAATTCTAGTGGACCAACAACCCAACTTTAAATTATTTTGTGTTGTTATTGTTGTAGTATGAATATATATATATATATATGCTTCAGTTTATGTGTCT

Coding sequence (CDS)

ATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGAGCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAGTGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCAGATGGGTCAGCCTGGGTCTGGCCCCTTTGGCCTGCAGGCCGAGCTGAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAACGGACAAGGCATCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACCACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCGGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCTGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGCTTGAGAACCCTAAAAGCGGAGATCACGACACTGGGCGGCCGAGTAAAGAACGTACTGTTTATCACCGGGGACGACGACTCCTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAG
Homology
[Close]
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.9e-80
Identity = 188/321 (58.57%), Postives = 226/321 (70.40%), Query Frame = 1 

Query: 27  SDVFGVGGGGGGGGLIFPE--VSPMMFTPPWTATTTIPQVHHDPFIPPPPPPS--YASFF 86
           S+  G  G  G G  IF +  VSP+   PP T+     Q   D F PP   P+  Y SFF
Sbjct: 48  SETLGASGNVGSGFTIFSQDSVSPIWSLPPPTSI----QPPFDQFPPPSSSPASFYGSFF 107

Query: 87  NRRSA---SLQFPYD---------------IGNNSLGIGQMGQPGSGPFGLQAELSKMSA 146
           NR  A    LQF Y+               +   S  +G + Q GSGPFGLQAEL KM+A
Sbjct: 108 NRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFGLQAELGKMTA 167

Query: 147 QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELK 206
           QEIMDAKALAASKSHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVIQHVKELK
Sbjct: 168 QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK 227

Query: 207 RQTTLIADVSPVPTELDELSVDVDASDE--DGKFVIKASLCCEDRSDLLPQIIKTLKSLR 266
           R+T++I++ + VPTE DEL+V     +E  DG+FVIKASLCCEDRSDLLP +IKTLK++R
Sbjct: 228 RETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMR 287

Query: 267 LRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE 324
           L+TLKAEITT+GGRVKNVLF+TG++ S  + EE      +Y I +I+EALK VMEK   E
Sbjct: 288 LKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE------EYCIGTIEEALKAVMEKSNVE 347

[Close]
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.9e-59
Identity = 153/312 (49.04%), Postives = 197/312 (63.14%), Query Frame = 1 

Query: 54  PWTATTTIPQVHHDPFIPPPPPPSYAS---FFNRRSASLQFPYDIGNN------------ 113
           PW++T+ +P    DP   P  P  Y+    +FNRR++S    +D  +             
Sbjct: 33  PWSSTS-LPSF--DPLHFPSNPTRYSDPVHYFNRRASSSSSSFDYNDGFVSPPPSMDHPQ 92

Query: 114 ------SLGIGQMGQPGSGPFGLQAEL-SKMSAQEIMDAKALAASKSHSEAERRRRERIN 173
                 S  +G + + GS  FG   E+  K+SAQE+MDAKALAASKSHSEAERRRRERIN
Sbjct: 93  NHLRILSEALGPIMRRGSS-FGFDGEIMGKLSAQEVMDAKALAASKSHSEAERRRRERIN 152

Query: 174 NHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASD 233
            HLAKLRS+LP+TTKTDKASLLAEVIQH+KELKRQT+ I D   VPTE D+L+VD   +D
Sbjct: 153 THLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDSSYND 212

Query: 234 EDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS 293
           E+G  VI+AS CC+DR+DL+  +I  LKSLRLRTLKAEI T+GGRVKN+LF++ + D   
Sbjct: 213 EEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYDDEE 272

Query: 294 D-------------QEEAEQQQHQYSISSIQEALKGVMEKVCSE----------DQSSSG 321
           D             ++  E++     +SSI+EALK V+EK              ++SSSG
Sbjct: 273 DHDSYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDESNDNNNLEKSSSG 332

[Close]
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 90/197 (45.69%), Postives = 130/197 (65.99%), Query Frame = 1 

Query: 131 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT--T 190
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 191 LIADVSPVPTELDELSV-DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLK 250
             +D + +P+E DE+SV        DG  + KASLCCEDRSDLLP +++ LKSL ++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 251 AEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE--DQS 310
           AE+ T+GGR ++VL +  D +    +          S+  +Q ALK ++E+      ++S
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE----------SVHFLQNALKSLLERSSKSLMERS 242

Query: 311 SSGS----IKRQRTNNH 319
           S G      KR+R  +H
Sbjct: 243 SGGGGGERSKRRRALDH 249

[Close]
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-30
Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1 

Query: 127 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQ 186
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 187 TTLIADVSPVPTELDELSV---DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRL 246
           T  I D   +P+E DE+SV   +  +  +D + + K S CCEDR +LL  +++TLKSL++
Sbjct: 97  TLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 247 RTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSED 306
            TL A++TT+GGR +NVL +  D +    Q          S++ +Q ALK ++E+     
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKEHHGVQ----------SVNFLQNALKSLLERSSKSV 216

Query: 307 QSSSGS------IKRQRTNNH 319
               G       +KR+R  +H
Sbjct: 217 MVGHGGGGGEERLKRRRALDH 226

[Close]
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.1e-21
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 1 

Query: 131 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLI 190
           KA + S+SH  AE+RRR+RIN+HL  LR L+P++ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 191 ADVSPVPTELDELSVD----VDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTL 250
                +PTE DE++V      D        + KAS CCED+ + + +II+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 251 KAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSS 310
           +AEI ++GGR++ + FI  D + +     A       S  +++++L   + ++ S   ++
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA------SAKALKQSLCSALNRITSSSTTT 238

Query: 311 SG----SIKRQR 315
           S       KRQR
Sbjct: 239 SSVCRIRSKRQR 243

[Close]
BLAST of CmoCh04G021090 vs. TrEMBL
Match: F6HF16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 235/345 (68.12%), Postives = 270/345 (78.26%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQ-NSDVFGVGGGGGGGGLIFPEVSPMMFTPP 61
           +++GEC       QG+QE LL+QQ   MQQ N+D +G  GGGG  GLIFPEVSP++   P
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYG--GGGGRSGLIFPEVSPIL--QP 66

Query: 62  WTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRSASLQFPYDIGNN-- 121
           W+     P VH              HDPF+ PPPP +Y S FNRR+ +LQF Y+  ++  
Sbjct: 67  WS----FPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQFAYEGPSSEH 126

Query: 122 ----SLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHL 181
               S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNHL
Sbjct: 127 LRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 186

Query: 182 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDG 241
           AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD SDEDG
Sbjct: 187 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDEDG 246

Query: 242 KFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS--- 301
           KFVIKASLCCEDR+DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG++DSSS   
Sbjct: 247 KFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSGE 306

Query: 302 DQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           +Q++ +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 NQQQQQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 340

[Close]
BLAST of CmoCh04G021090 vs. TrEMBL
Match: B9SEI3_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-105
Identity = 242/352 (68.75%), Postives = 272/352 (77.27%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTM--QQNSDVFGVGGGGGGGGLIFPEVSPMMFTP 61
           +++GEC       QG+QE LL+QQ Q    QQ SD++G G  GG  GLIFPEVSP++   
Sbjct: 7   EDQGECSQTIHNLQGYQEQLLLQQMQHQHQQQTSDMYG-GARGGSSGLIFPEVSPIL--- 66

Query: 62  PWT---------ATTTIP--QVHH--------DPF-IPPPPPPSYASFFNRRSASLQFPY 121
           PW          A T  P  QVHH        DPF IPPP P SY + FNRR+ +LQF Y
Sbjct: 67  PWPLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFLIPPPVPSSYGNLFNRRAPALQFAY 126

Query: 122 DIGNNSLG--------IGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 181
           D G++S          +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 127 D-GSSSHDHLRIITDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 186

Query: 182 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 241
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+ 
Sbjct: 187 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT- 246

Query: 242 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 301
            VDASDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 247 -VDASDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 306

Query: 302 DDDSSSD-QEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           ++DSSS+  EE +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 EEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEK-SGGDESSSGSVKRQRTN 350

[Close]
BLAST of CmoCh04G021090 vs. TrEMBL
Match: A0A061EB14_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_011873 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 233/347 (67.15%), Postives = 269/347 (77.52%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQ------NSDVFGVGGGGGGGGLIFPEVSPM 61
           +++GEC       QG+QE LL+QQ Q MQQ      N+D+FG    G  GGLIFPEVSP+
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFG----GTRGGLIFPEVSPI 66

Query: 62  MFTPPWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRSASLQFPYDI 121
           +   PW+    +P VH              HDPF+ PPPP SY + FNRR+ +LQF YD 
Sbjct: 67  L---PWS----LPPVHSFNPAHFNGNQVRDHDPFLVPPPPSSYGALFNRRAPALQFAYDG 126

Query: 122 GNN------SLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRER 181
            +       S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRER
Sbjct: 127 PSTDHLRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRER 186

Query: 182 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDA 241
           INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD 
Sbjct: 187 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDT 246

Query: 242 SDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDS 301
           SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRL+TLKAEITTLGGRVKNVLFITG++DS
Sbjct: 247 SDEDGKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDS 306

Query: 302 SSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           SS  ++ +QQQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRTN
Sbjct: 307 SSSGDQ-QQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRTN 338

[Close]
BLAST of CmoCh04G021090 vs. TrEMBL
Match: A0A067KC07_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18280 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 238/356 (66.85%), Postives = 267/356 (75.00%), Query Frame = 1 

Query: 4   EGEC------FQGFQEHLLMQQFQTMQQ-NSDVF--GVGGGGGGGGLIFPEVSPMMFTPP 63
           +GEC      FQ +QE  L+QQ Q     N+DV   G GGGG G GLIFPEVSP++   P
Sbjct: 11  QGECSQNIHNFQDYQEQFLLQQMQQQHNTNNDVIYGGGGGGGRGSGLIFPEVSPIL---P 70

Query: 64  WTATTTIPQVH----------------HDPFIPPPPPPS-YASFFNRRSAS--LQFPYD- 123
           W+    +P VH                HDPF+ PPP PS Y SFFNRRSAS  LQF YD 
Sbjct: 71  WS----LPPVHSFNPTHFNPNPVRDHQHDPFLIPPPLPSPYGSFFNRRSASPALQFAYDG 130

Query: 124 ---------IGNNSLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 183
                    I +++LG     QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 131 ASTNDHHLRIFSDTLGPVLHHQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 190

Query: 184 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 243
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IA+ SPVPTE+DEL+V
Sbjct: 191 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTEMDELTV 250

Query: 244 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 303
           D   SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 251 DTSESDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 310

Query: 304 DDDSSSDQEEAE-QQQH-QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHN 320
           ++DSSS+  +++ Q QH QYSI+SIQEALK VMEK    D SSS S+KRQRT N N
Sbjct: 311 EEDSSSNTNDSQNQHQHQQYSITSIQEALKAVMEK-SGADDSSSASVKRQRTTNIN 358

[Close]
BLAST of CmoCh04G021090 vs. TrEMBL
Match: B9HWM2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010g PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.7e-103
Identity = 233/343 (67.93%), Postives = 260/343 (75.80%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQN-----SDVFGVGGGGGGGGLIFPEVSPMM 61
           +++GEC       Q +QE LL+Q  Q MQQ+     SD++G   G  G G IFPEVSP++
Sbjct: 7   EDQGECSQTIHNLQNYQEQLLLQYHQQMQQHQQQQSSDIYG---GARGSGFIFPEVSPIL 66

Query: 62  FTP--------PWTATTTIPQVHHDPF-IPPPPPPSYASFFNRRSASLQFPYD------I 121
             P        P   T   P   HDPF IPPP P SY   FNRR+ SLQF YD      +
Sbjct: 67  PWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSYGGLFNRRAPSLQFAYDGTPSDHL 126

Query: 122 GNNSLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLA 181
              S  +G + QPGS PFGLQAELSKM+AQEIMDAKALAASKSHSEAERRRRERINNHLA
Sbjct: 127 RIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHLA 186

Query: 182 KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGK 241
           KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIA+ SPVPTE+DEL+  VD +DEDGK
Sbjct: 187 KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVPTEMDELT--VDTADEDGK 246

Query: 242 FVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEE 301
           FVIKASLCCEDR DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFI+G++DSSSD  +
Sbjct: 247 FVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFISGEEDSSSDSND 306

Query: 302 AEQQQH--QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
             QQQ   QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 QHQQQEPLQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 343

[Close]
BLAST of CmoCh04G021090 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 299.7 bits (766), Expect = 2.2e-81
Identity = 188/321 (58.57%), Postives = 226/321 (70.40%), Query Frame = 1 

Query: 27  SDVFGVGGGGGGGGLIFPE--VSPMMFTPPWTATTTIPQVHHDPFIPPPPPPS--YASFF 86
           S+  G  G  G G  IF +  VSP+   PP T+     Q   D F PP   P+  Y SFF
Sbjct: 48  SETLGASGNVGSGFTIFSQDSVSPIWSLPPPTSI----QPPFDQFPPPSSSPASFYGSFF 107

Query: 87  NRRSA---SLQFPYD---------------IGNNSLGIGQMGQPGSGPFGLQAELSKMSA 146
           NR  A    LQF Y+               +   S  +G + Q GSGPFGLQAEL KM+A
Sbjct: 108 NRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFGLQAELGKMTA 167

Query: 147 QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELK 206
           QEIMDAKALAASKSHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVIQHVKELK
Sbjct: 168 QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK 227

Query: 207 RQTTLIADVSPVPTELDELSVDVDASDE--DGKFVIKASLCCEDRSDLLPQIIKTLKSLR 266
           R+T++I++ + VPTE DEL+V     +E  DG+FVIKASLCCEDRSDLLP +IKTLK++R
Sbjct: 228 RETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMR 287

Query: 267 LRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE 324
           L+TLKAEITT+GGRVKNVLF+TG++ S  + EE      +Y I +I+EALK VMEK   E
Sbjct: 288 LKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE------EYCIGTIEEALKAVMEKSNVE 347

[Close]
BLAST of CmoCh04G021090 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60
Identity = 153/312 (49.04%), Postives = 197/312 (63.14%), Query Frame = 1 

Query: 54  PWTATTTIPQVHHDPFIPPPPPPSYAS---FFNRRSASLQFPYDIGNN------------ 113
           PW++T+ +P    DP   P  P  Y+    +FNRR++S    +D  +             
Sbjct: 33  PWSSTS-LPSF--DPLHFPSNPTRYSDPVHYFNRRASSSSSSFDYNDGFVSPPPSMDHPQ 92

Query: 114 ------SLGIGQMGQPGSGPFGLQAEL-SKMSAQEIMDAKALAASKSHSEAERRRRERIN 173
                 S  +G + + GS  FG   E+  K+SAQE+MDAKALAASKSHSEAERRRRERIN
Sbjct: 93  NHLRILSEALGPIMRRGSS-FGFDGEIMGKLSAQEVMDAKALAASKSHSEAERRRRERIN 152

Query: 174 NHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASD 233
            HLAKLRS+LP+TTKTDKASLLAEVIQH+KELKRQT+ I D   VPTE D+L+VD   +D
Sbjct: 153 THLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDSSYND 212

Query: 234 EDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS 293
           E+G  VI+AS CC+DR+DL+  +I  LKSLRLRTLKAEI T+GGRVKN+LF++ + D   
Sbjct: 213 EEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYDDEE 272

Query: 294 D-------------QEEAEQQQHQYSISSIQEALKGVMEKVCSE----------DQSSSG 321
           D             ++  E++     +SSI+EALK V+EK              ++SSSG
Sbjct: 273 DHDSYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDESNDNNNLEKSSSG 332

[Close]
BLAST of CmoCh04G021090 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 90/197 (45.69%), Postives = 130/197 (65.99%), Query Frame = 1 

Query: 131 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT--T 190
           +ALAA ++H EAERRRRERIN+HL KLR++L   +KTDKA+LLA+V+Q V+ELK+QT  T
Sbjct: 63  RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLET 122

Query: 191 LIADVSPVPTELDELSV-DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLK 250
             +D + +P+E DE+SV        DG  + KASLCCEDRSDLLP +++ LKSL ++TL+
Sbjct: 123 SDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLR 182

Query: 251 AEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSE--DQS 310
           AE+ T+GGR ++VL +  D +    +          S+  +Q ALK ++E+      ++S
Sbjct: 183 AEMVTIGGRTRSVLVVAADKEMHGVE----------SVHFLQNALKSLLERSSKSLMERS 242

Query: 311 SSGS----IKRQRTNNH 319
           S G      KR+R  +H
Sbjct: 243 SGGGGGERSKRRRALDH 249

[Close]
BLAST of CmoCh04G021090 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 84/201 (41.79%), Postives = 126/201 (62.69%), Query Frame = 1 

Query: 127 IMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQ 186
           + + KALA+ ++H EAER+RR RIN+HL KLR LL   +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37  VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96

Query: 187 TTLIADVSPVPTELDELSV---DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRL 246
           T  I D   +P+E DE+SV   +  +  +D + + K S CCEDR +LL  +++TLKSL++
Sbjct: 97  TLEITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 156

Query: 247 RTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSED 306
            TL A++TT+GGR +NVL +  D +    Q          S++ +Q ALK ++E+     
Sbjct: 157 ETLFADMTTVGGRTRNVLVVAADKEHHGVQ----------SVNFLQNALKSLLERSSKSV 216

Query: 307 QSSSGS------IKRQRTNNH 319
               G       +KR+R  +H
Sbjct: 217 MVGHGGGGGEERLKRRRALDH 226

[Close]
BLAST of CmoCh04G021090 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 71/192 (36.98%), Postives = 112/192 (58.33%), Query Frame = 1 

Query: 131 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLI 190
           KA + S+SH  AE+RRR+RIN+HL  LR L+P++ K DKA+LLA VI+ VKELK++    
Sbjct: 59  KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118

Query: 191 ADVSPVPTELDELSVD----VDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTL 250
                +PTE DE++V      D        + KAS CCED+ + + +II+ L  L+L T+
Sbjct: 119 PIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETI 178

Query: 251 KAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSS 310
           +AEI ++GGR++ + FI  D + +     A       S  +++++L   + ++ S   ++
Sbjct: 179 QAEIISVGGRMR-INFILKDSNCNETTNIAA------SAKALKQSLCSALNRITSSSTTT 238

Query: 311 SG----SIKRQR 315
           S       KRQR
Sbjct: 239 SSVCRIRSKRQR 243

[Close]
BLAST of CmoCh04G021090 vs. NCBI nr
Match: gi|225423869|ref|XP_002278697.1| (PREDICTED: transcription factor bHLH30 [Vitis vinifera])

HSP 1 Score: 394.0 bits (1011), Expect = 2.4e-106
Identity = 235/345 (68.12%), Postives = 270/345 (78.26%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQ-NSDVFGVGGGGGGGGLIFPEVSPMMFTPP 61
           +++GEC       QG+QE LL+QQ   MQQ N+D +G  GGGG  GLIFPEVSP++   P
Sbjct: 7   EDQGECSQTIHNIQGYQEQLLLQQHHQMQQQNNDAYG--GGGGRSGLIFPEVSPIL--QP 66

Query: 62  WTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRSASLQFPYDIGNN-- 121
           W+     P VH              HDPF+ PPPP +Y S FNRR+ +LQF Y+  ++  
Sbjct: 67  WS----FPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQFAYEGPSSEH 126

Query: 122 ----SLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHL 181
               S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRERINNHL
Sbjct: 127 LRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHL 186

Query: 182 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDG 241
           AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD SDEDG
Sbjct: 187 AKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT--VDTSDEDG 246

Query: 242 KFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSS--- 301
           KFVIKASLCCEDR+DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG++DSSS   
Sbjct: 247 KFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSGE 306

Query: 302 DQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           +Q++ +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 NQQQQQQQQQQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 340

[Close]
BLAST of CmoCh04G021090 vs. NCBI nr
Match: gi|255566837|ref|XP_002524402.1| (PREDICTED: transcription factor bHLH30 [Ricinus communis])

HSP 1 Score: 391.3 bits (1004), Expect = 1.6e-105
Identity = 242/352 (68.75%), Postives = 272/352 (77.27%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTM--QQNSDVFGVGGGGGGGGLIFPEVSPMMFTP 61
           +++GEC       QG+QE LL+QQ Q    QQ SD++G G  GG  GLIFPEVSP++   
Sbjct: 7   EDQGECSQTIHNLQGYQEQLLLQQMQHQHQQQTSDMYG-GARGGSSGLIFPEVSPIL--- 66

Query: 62  PWT---------ATTTIP--QVHH--------DPF-IPPPPPPSYASFFNRRSASLQFPY 121
           PW          A T  P  QVHH        DPF IPPP P SY + FNRR+ +LQF Y
Sbjct: 67  PWPLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFLIPPPVPSSYGNLFNRRAPALQFAY 126

Query: 122 DIGNNSLG--------IGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 181
           D G++S          +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 127 D-GSSSHDHLRIITDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 186

Query: 182 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 241
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+ 
Sbjct: 187 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT- 246

Query: 242 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 301
            VDASDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 247 -VDASDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 306

Query: 302 DDDSSSD-QEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           ++DSSS+  EE +QQQ QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 EEDSSSNSNEEDQQQQPQYSISSIQEALKAVMEK-SGGDESSSGSVKRQRTN 350

[Close]
BLAST of CmoCh04G021090 vs. NCBI nr
Match: gi|590701106|ref|XP_007046318.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 3.5e-105
Identity = 233/347 (67.15%), Postives = 269/347 (77.52%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQ------NSDVFGVGGGGGGGGLIFPEVSPM 61
           +++GEC       QG+QE LL+QQ Q MQQ      N+D+FG    G  GGLIFPEVSP+
Sbjct: 7   EDQGECSQAIHNIQGYQEQLLIQQHQQMQQHHHQQQNNDLFG----GTRGGLIFPEVSPI 66

Query: 62  MFTPPWTATTTIPQVH--------------HDPFIPPPPPPSYASFFNRRSASLQFPYDI 121
           +   PW+    +P VH              HDPF+ PPPP SY + FNRR+ +LQF YD 
Sbjct: 67  L---PWS----LPPVHSFNPAHFNGNQVRDHDPFLVPPPPSSYGALFNRRAPALQFAYDG 126

Query: 122 GNN------SLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRER 181
            +       S  +G + QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERRRRER
Sbjct: 127 PSTDHLRILSDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRER 186

Query: 182 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDA 241
           INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT+LIA+ SPVPTE+DEL+  VD 
Sbjct: 187 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELT--VDT 246

Query: 242 SDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDS 301
           SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRL+TLKAEITTLGGRVKNVLFITG++DS
Sbjct: 247 SDEDGKFLIKASLCCEDRSDLLPDLIKTLKALRLKTLKAEITTLGGRVKNVLFITGEEDS 306

Query: 302 SSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
           SS  ++ +QQQ QYS+SSIQEALK VMEK  S D+SS+GS+KRQRTN
Sbjct: 307 SSSGDQ-QQQQQQYSVSSIQEALKAVMEKT-SGDESSAGSVKRQRTN 338

[Close]
BLAST of CmoCh04G021090 vs. NCBI nr
Match: gi|802680781|ref|XP_012082021.1| (PREDICTED: transcription factor bHLH30-like [Jatropha curcas])

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-103
Identity = 238/356 (66.85%), Postives = 267/356 (75.00%), Query Frame = 1 

Query: 4   EGEC------FQGFQEHLLMQQFQTMQQ-NSDVF--GVGGGGGGGGLIFPEVSPMMFTPP 63
           +GEC      FQ +QE  L+QQ Q     N+DV   G GGGG G GLIFPEVSP++   P
Sbjct: 11  QGECSQNIHNFQDYQEQFLLQQMQQQHNTNNDVIYGGGGGGGRGSGLIFPEVSPIL---P 70

Query: 64  WTATTTIPQVH----------------HDPFIPPPPPPS-YASFFNRRSAS--LQFPYD- 123
           W+    +P VH                HDPF+ PPP PS Y SFFNRRSAS  LQF YD 
Sbjct: 71  WS----LPPVHSFNPTHFNPNPVRDHQHDPFLIPPPLPSPYGSFFNRRSASPALQFAYDG 130

Query: 124 ---------IGNNSLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERR 183
                    I +++LG     QPGS PFGLQAEL KM+AQEIMDAKALAASKSHSEAERR
Sbjct: 131 ASTNDHHLRIFSDTLGPVLHHQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERR 190

Query: 184 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSV 243
           RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IA+ SPVPTE+DEL+V
Sbjct: 191 RRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAETSPVPTEMDELTV 250

Query: 244 DVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITG 303
           D   SDEDGKF+IKASLCCEDRSDLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFITG
Sbjct: 251 DTSESDEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 310

Query: 304 DDDSSSDQEEAE-QQQH-QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHN 320
           ++DSSS+  +++ Q QH QYSI+SIQEALK VMEK    D SSS S+KRQRT N N
Sbjct: 311 EEDSSSNTNDSQNQHQHQQYSITSIQEALKAVMEK-SGADDSSSASVKRQRTTNIN 358

[Close]
BLAST of CmoCh04G021090 vs. NCBI nr
Match: gi|224111740|ref|XP_002315961.1| (basic helix-loop-helix family protein [Populus trichocarpa])

HSP 1 Score: 382.1 bits (980), Expect = 9.6e-103
Identity = 233/343 (67.93%), Postives = 260/343 (75.80%), Query Frame = 1 

Query: 2   KEEGEC------FQGFQEHLLMQQFQTMQQN-----SDVFGVGGGGGGGGLIFPEVSPMM 61
           +++GEC       Q +QE LL+Q  Q MQQ+     SD++G   G  G G IFPEVSP++
Sbjct: 7   EDQGECSQTIHNLQNYQEQLLLQYHQQMQQHQQQQSSDIYG---GARGSGFIFPEVSPIL 66

Query: 62  FTP--------PWTATTTIPQVHHDPF-IPPPPPPSYASFFNRRSASLQFPYD------I 121
             P        P   T   P   HDPF IPPP P SY   FNRR+ SLQF YD      +
Sbjct: 67  PWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSYGGLFNRRAPSLQFAYDGTPSDHL 126

Query: 122 GNNSLGIGQMGQPGSGPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLA 181
              S  +G + QPGS PFGLQAELSKM+AQEIMDAKALAASKSHSEAERRRRERINNHLA
Sbjct: 127 RIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHLA 186

Query: 182 KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGK 241
           KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIA+ SPVPTE+DEL+  VD +DEDGK
Sbjct: 187 KLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVPTEMDELT--VDTADEDGK 246

Query: 242 FVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEE 301
           FVIKASLCCEDR DLLP +IKTLK+LRLRTLKAEITTLGGRVKNVLFI+G++DSSSD  +
Sbjct: 247 FVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFISGEEDSSSDSND 306

Query: 302 AEQQQH--QYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTN 317
             QQQ   QYSISSIQEALK VMEK    D+SSSGS+KRQRTN
Sbjct: 307 QHQQQEPLQYSISSIQEALKAVMEKT-GGDESSSGSVKRQRTN 343

The following BLAST results are available for this feature:
BLAST of CmoCh04G021090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH030_ARATH3.9e-8058.57Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH2.9e-5949.04Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH106_ARATH2.3e-3245.69Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BH107_ARATH2.9e-3041.79Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH051_ARATH4.1e-2136.98Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
BLAST of CmoCh04G021090 vs. TrEMBL
Match NameE-valueIdentityDescription
F6HF16_VITVI1.7e-10668.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02940 PE=4 SV=... [more]
B9SEI3_RICCO1.1e-10568.75DNA binding protein, putative OS=Ricinus communis GN=RCOM_0705340 PE=4 SV=1[more]
A0A061EB14_THECC2.5e-10567.15Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
A0A067KC07_JATCU2.3e-10366.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18280 PE=4 SV=1[more]
B9HWM2_POPTR6.7e-10367.93Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14010... [more]
BLAST of CmoCh04G021090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68810.12.2e-8158.57 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G25710.11.6e-6049.04 basic helix-loop-helix 32[more]
AT2G41130.11.3e-3345.69 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G56770.11.6e-3141.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G40200.12.3e-2236.98 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmoCh04G021090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|225423869|ref|XP_002278697.1|2.4e-10668.12PREDICTED: transcription factor bHLH30 [Vitis vinifera][more]
gi|255566837|ref|XP_002524402.1|1.6e-10568.75PREDICTED: transcription factor bHLH30 [Ricinus communis][more]
gi|590701106|ref|XP_007046318.1|3.5e-10567.15Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao][more]
gi|802680781|ref|XP_012082021.1|3.3e-10366.85PREDICTED: transcription factor bHLH30-like [Jatropha curcas][more]
gi|224111740|ref|XP_002315961.1|9.6e-10367.93basic helix-loop-helix family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G021090.1CmoCh04G021090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 138..191
score: 6.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 137..183
score: 7.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 140..189
score: 7.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 134..183
score: 16
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 138..188
score: 1.7
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 221..277
score: 3.
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 9..297
score: 3.0E
NoneNo IPR availablePANTHERPTHR12565:SF139SUBFAMILY NOT NAMEDcoord: 9..297
score: 3.0E