Lsi09G009390 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G009390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DUF4228 domain protein
Location	chr09 : 11892942 .. 11893496 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGTCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA

mRNA sequence

ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGTCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA

Coding sequence (CDS)

ATGGGGAATTACATTTCTTGCACTCTGTCCACCCCAATCGGTGGCAAACCGTCCACTGCTTCGACGACGACTGTCATCTTTCCCAGCGGCCAAGTCCGACACTTTCACGAACCGGTCAAGGCGGCGGAGCTCATGTTCGAGATCCCTAATTTCTTCCTCGTCAATTCTCAGTCGGTTCATCCGGGTCGGAGGTTTTCGGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACGTTATGTTTCCGATGAAGAAGGTCAATTCGGTGGTGTCTGTGACCGATATGGGAGCTTTGTTTCTCGCCGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTATGGGCGGTGGGGAATCTAATGTTTGTGTTTGGCCAGAGGTGGAAGCAGAGGAATCGAAACCCAAGTTGAAATTGGATGGTGTTGATGATGATGACGAGGACATGGAGGGGTTTTCGCCGGCACCGGAATTTGCTCATCGGAGGTCGATGTGCAGGTCGAGGAAGCCATTGTTGGAGACCATAGTTGAAGAGCCGATATGTTCAAGATGA

Protein sequence

MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVHPGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGESNVCVWPEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEEPICSR

Homology

[Close]

BLAST of Lsi09G009390 vs. TrEMBL
Match: A0A0A0KN52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G416270 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-88
Identity = 164/185 (88.65%), Postives = 173/185 (93.51%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLST IGGK ST+STTTVIFPSGQ+RHFHE +KAAELMFEIPNFFLVNSQS+H
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSALMADEDLEMGNLY+MFPM KVNSVVSV DMGALFLAAERVSGGKKRRI+GGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 SNVCVWPEVEAEESKPKLKLDGVDD-DDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEE 180
           S VCVWPEVE EESKPKLKLDG DD DD+D+EGFSP PEFAHRRSMCRSRKPLLETI EE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGGDDEDDDDLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

Query: 181 PICSR 185
           PICSR
Sbjct: 181 PICSR 185

[Close]

BLAST of Lsi09G009390 vs. TrEMBL
Match: M1D0F5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030595 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.0e-48
Identity = 112/194 (57.73%), Postives = 134/194 (69.07%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLS P G K S      VIFPSG++RHF++P+KAAE+M E PNFFLVN++S+H
Sbjct: 1   MGNYISCTLSGPGGNKQSRG--VKVIFPSGEIRHFYQPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGG-- 120
            GRRFSAL ADEDLEMGN+YVMFPMK+VNS VS  DMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAADMGALLLTANSVS---KRMSIGSLR 120

Query: 121 --GESNVCVWPEVEAE------ESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRK 180
              ES V    +++ +       + PKL LD       D+E FS + +F HR SMCRS+K
Sbjct: 121 ILPESLVAETEQIQIQGNYYEKSTLPKLNLD-------DIEDFS-SEQFKHRLSMCRSKK 180

Query: 181 PLLETIVEEPICSR 185
           PLLETI EEP+CSR
Sbjct: 181 PLLETIAEEPVCSR 181

[Close]

BLAST of Lsi09G009390 vs. TrEMBL
Match: K4BCR7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLS P G K S      VIFP G++RHF+EP+KAAE+M E PNFFLVN++S+H
Sbjct: 1   MGNYISCTLSGPGGNKESRG--IKVIFPCGEIRHFYEPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSAL ADEDLEMGN+YVMFPMK+VNS VS  DMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAGDMGALLLTANSVS---KRVSIG--- 120

Query: 121 SNVCVWPEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEEP 180
            ++ + PE E   + PKL LD       D+E FS + EF HR SMCRS+KPLLETI EEP
Sbjct: 121 -SLRILPE-ENYCTLPKLNLD-------DIEDFS-SEEFKHRLSMCRSKKPLLETIAEEP 166

Query: 181 ICSR 185
           +C R
Sbjct: 181 VCLR 166

[Close]

BLAST of Lsi09G009390 vs. TrEMBL
Match: W9SQ68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027115 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.5e-46
Identity = 111/188 (59.04%), Postives = 131/188 (69.68%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNY+SCTLST +GGK        VIFP G++R F EP+KAAELM E+PNFFLVNS S+ 
Sbjct: 1   MGNYVSCTLST-LGGKQPACKAAKVIFPGGELRKFDEPIKAAELMLEMPNFFLVNSCSLQ 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAER-VSGGKKRRIMG-G 120
            GRRFSAL ADEDLEMGN+YVMFPM++VNSVV+  DMGA+FL A++ VSGGKKR +    
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMQRVNSVVTAADMGAIFLVAKKAVSGGKKRVLPAEA 120

Query: 121 GESNVCVW--------PEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRK 179
           GE+ V +          +  A    PKL LD       D+E FS APEF HR SM RS+K
Sbjct: 121 GEAAVAIGNLRKDNIDHDHVAAAPAPKLNLD-------DIEDFS-APEFMHRLSMSRSKK 179

[Close]

BLAST of Lsi09G009390 vs. TrEMBL
Match: A0A161ZN36_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025887 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTL+T    K +  STT VIFP+G+VRH+ EPVKAAE+M E PNFF+VNS+S+ 
Sbjct: 1   MGNYISCTLTTSTAIK-NFQSTTKVIFPTGEVRHYCEPVKAAEVMLESPNFFVVNSKSLQ 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRF AL AD++LE+ N YVMFPMK+VNSV++  DMGALFL A+RV+ G + RI+    
Sbjct: 61  IGRRFVALTADQNLEVANAYVMFPMKRVNSVITAADMGALFLKAKRVTTGNQTRIL---- 120

Query: 121 SNVCVWPE--VEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVE 180
             V   PE   + EE+ PKL ++  DD            EF HR SMCRS+KPLLETI E
Sbjct: 121 PEVINHPEAVTKEEEAAPKLNIEDTDD--------FLFHEFNHRLSMCRSKKPLLETIEE 173

Query: 181 EPICSR 185
           EPI SR
Sbjct: 181 EPIFSR 173

[Close]

BLAST of Lsi09G009390 vs. TAIR10
Match: AT5G17350.1 (AT5G17350.1 unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 9.5e-29
Identity = 79/194 (40.72%), Postives = 115/194 (59.28%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNY+S  LS       S++S   VI P G VR+ H P+KAAELM EIP+FFLV+++S+ 
Sbjct: 1   MGNYVSSALSKT---SSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLK 60

Query: 61  PGRRFSALMADEDLEMG--NLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGG 120
            GR+F  L AD+DL++   ++YV FPM +  S  + +D+  LF+AA++    ++R  +G 
Sbjct: 61  IGRKFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKK----QRRHRVGS 120

Query: 121 GESNVCVWPEVEAEESKPKLKLDGVDDDD-----------EDMEGFSPAPEFAHRRSMCR 180
             S+      V+   +  ++  DG  DD            ED+E FS A EF HR S+ +
Sbjct: 121 DHSSAA----VKHCHNNGRVSPDGEGDDVKVISAGSKLNLEDIEEFS-AAEFMHRISVSK 180

Query: 181 SRKPLLETIVEEPI 182
           S+KP LETIVEE +
Sbjct: 181 SKKPKLETIVEESL 182

[Close]

BLAST of Lsi09G009390 vs. TAIR10
Match: AT3G03280.1 (AT3G03280.1 unknown protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 79/183 (43.17%), Postives = 108/183 (59.02%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNY+SC L+     K S++    VI P G VR  H P KAAELM E+P++FLV+++SV 
Sbjct: 1   MGNYVSCALN-----KTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVK 60

Query: 61  PGRRFSALMADEDLEMG--NLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGG 120
            GR+F  L AD+DL++G  ++YV FPM +  S  + +DM  L+L       GKKR    G
Sbjct: 61  VGRKFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLT------GKKRTKNCG 120

Query: 121 GESNVCVWPEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVE 180
                 V PE    E    ++L G   + ED+E FS A EF HR S+ +S+KP LETI E
Sbjct: 121 HRR---VSPE---NEDNDDVRLIGPKLNLEDIEEFS-AAEFIHRISVSKSKKPQLETIAE 165

Query: 181 EPI 182
           + +
Sbjct: 181 DHV 165

[Close]

BLAST of Lsi09G009390 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07
Identity = 35/127 (27.56%), Postives = 60/127 (47.24%), Query Frame = 1


Query: 21  STTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVHPGRRFSALMADEDLEMGNLY 80
           +T  +I   G++  F  PVK   ++ + P  F+ NS  +      +A+ ADE+L++G +Y
Sbjct: 13  ATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIY 72

Query: 81  VMFPMKKVNSVVSVTDMGALFLAAER--VSGGKKRRIMGGGESNVCVWPEVEAEESKPKL 140
              P+  +   +   +M AL + A    + GG      GGG    CV P V     K ++
Sbjct: 73  FALPLCWLRQPLKAEEMAALAVKASSALMRGG------GGGCRRKCVEPIV---SDKLRM 130

Query: 141 KLDGVDD 146
           ++   DD
Sbjct: 133 RVGSGDD 130

[Close]

BLAST of Lsi09G009390 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06
Identity = 27/93 (29.03%), Postives = 46/93 (49.46%), Query Frame = 1


Query: 21  STTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVHPGRRFSALMADEDLEMGNLY 80
           +T  +I   G++  F  PVK   ++ + P  F+ NS  +      SA+ ADE+ ++G LY
Sbjct: 13  ATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQLGQLY 72

Query: 81  VMFPMKKVNSVVSVTDMGALFLAAERV---SGG 111
              P+  ++  +   +M AL + A      SGG
Sbjct: 73  FALPLSSLHHSLKAEEMAALAVKASSALMRSGG 105

[Close]

BLAST of Lsi09G009390 vs. NCBI nr
Match: gi|778708503|ref|XP_011656216.1| (PREDICTED: uncharacterized protein LOC105435675 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 2.9e-88
Identity = 164/185 (88.65%), Postives = 173/185 (93.51%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLST IGGK ST+STTTVIFPSGQ+RHFHE +KAAELMFEIPNFFLVNSQS+H
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSALMADEDLEMGNLY+MFPM KVNSVVSV DMGALFLAAERVSGGKKRRI+GGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 SNVCVWPEVEAEESKPKLKLDGVDD-DDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEE 180
           S VCVWPEVE EESKPKLKLDG DD DD+D+EGFSP PEFAHRRSMCRSRKPLLETI EE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGGDDEDDDDLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

Query: 181 PICSR 185
           PICSR
Sbjct: 181 PICSR 185

[Close]

BLAST of Lsi09G009390 vs. NCBI nr
Match: gi|659121124|ref|XP_008460510.1| (PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 3.6e-86
Identity = 160/187 (85.56%), Postives = 171/187 (91.44%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLSTPIG KPS++STTTVIFPSGQ+RHFHE VKAAELMFEIPNFFLVNSQS+H
Sbjct: 1   MGNYISCTLSTPIGVKPSSSSTTTVIFPSGQIRHFHESVKAAELMFEIPNFFLVNSQSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSALMADEDLEMGNLY+MFPMKKVNSVVSV DMGALFLAAERVSG  KRRI+GGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMKKVNSVVSVADMGALFLAAERVSGRNKRRIIGGGD 120

Query: 121 SNVCVWPEVEAEESKPKLKLD---GVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIV 180
           S VCVWPEVE EESKPKL LD   G D+DD+D+EGFSP PEF HRRSMCRSRKPLLETI 
Sbjct: 121 STVCVWPEVETEESKPKLNLDGSGGSDEDDDDVEGFSPVPEFGHRRSMCRSRKPLLETIA 180

Query: 181 EEPICSR 185
           EEP+CSR
Sbjct: 181 EEPVCSR 187

[Close]

BLAST of Lsi09G009390 vs. NCBI nr
Match: gi|970009033|ref|XP_015065378.1| (PREDICTED: uncharacterized protein LOC107010615 [Solanum pennellii])

HSP 1 Score: 198.7 bits (504), Expect = 8.6e-48
Identity = 113/190 (59.47%), Postives = 132/190 (69.47%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLS P G K S      VIFPSG++RHF++P+KAAE+M E PNFFLVN++S+H
Sbjct: 1   MGNYISCTLSGPGGNKQSRG--IKVIFPSGEIRHFYQPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSAL ADEDLEMGN+YVMFPMK+VNS VS  DMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAGDMGALLLTANSVS---KRVSIG--- 120

Query: 121 SNVCVWPEVEAEE------SKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLE 180
            +  + PE   EE      + PKL LD       D+E FS + EF HR SMCRS+KPLLE
Sbjct: 121 -SFRILPESSTEENFSEKSTLPKLNLD-------DIEDFS-SEEFKHRLSMCRSKKPLLE 173

Query: 181 TIVEEPICSR 185
           TI EEP+C R
Sbjct: 181 TIAEEPVCLR 173

[Close]

BLAST of Lsi09G009390 vs. NCBI nr
Match: gi|565382966|ref|XP_006357799.1| (PREDICTED: uncharacterized protein LOC102602533 [Solanum tuberosum])

HSP 1 Score: 198.7 bits (504), Expect = 8.6e-48
Identity = 112/194 (57.73%), Postives = 134/194 (69.07%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLS P G K S      VIFPSG++RHF++P+KAAE+M E PNFFLVN++S+H
Sbjct: 1   MGNYISCTLSGPGGNKQSRG--VKVIFPSGEIRHFYQPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGG-- 120
            GRRFSAL ADEDLEMGN+YVMFPMK+VNS VS  DMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAADMGALLLTANSVS---KRMSIGSLR 120

Query: 121 --GESNVCVWPEVEAE------ESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRK 180
              ES V    +++ +       + PKL LD       D+E FS + +F HR SMCRS+K
Sbjct: 121 ILPESLVAETEQIQIQGNYYEKSTLPKLNLD-------DIEDFS-SEQFKHRLSMCRSKK 180

Query: 181 PLLETIVEEPICSR 185
           PLLETI EEP+CSR
Sbjct: 181 PLLETIAEEPVCSR 181

[Close]

BLAST of Lsi09G009390 vs. NCBI nr
Match: gi|723670004|ref|XP_010316076.1| (PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum])

HSP 1 Score: 196.4 bits (498), Expect = 4.3e-47
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 1


Query: 1   MGNYISCTLSTPIGGKPSTASTTTVIFPSGQVRHFHEPVKAAELMFEIPNFFLVNSQSVH 60
           MGNYISCTLS P G K S      VIFP G++RHF+EP+KAAE+M E PNFFLVN++S+H
Sbjct: 1   MGNYISCTLSGPGGNKESRG--IKVIFPCGEIRHFYEPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  PGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALFLAAERVSGGKKRRIMGGGE 120
            GRRFSAL ADEDLEMGN+YVMFPMK+VNS VS  DMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAGDMGALLLTANSVS---KRVSIG--- 120

Query: 121 SNVCVWPEVEAEESKPKLKLDGVDDDDEDMEGFSPAPEFAHRRSMCRSRKPLLETIVEEP 180
            ++ + PE E   + PKL LD       D+E FS + EF HR SMCRS+KPLLETI EEP
Sbjct: 121 -SLRILPE-ENYCTLPKLNLD-------DIEDFS-SEEFKHRLSMCRSKKPLLETIAEEP 166

Query: 181 ICSR 185
           +C R
Sbjct: 181 VCLR 166

The following BLAST results are available for this feature:

BLAST of Lsi09G009390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G009390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN52_CUCSA	2.0e-88	88.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G416270 PE=4 SV=1	[more]
M1D0F5_SOLTU	6.0e-48	57.73	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030595 PE=4 SV=1	[more]
K4BCR7_SOLLC	3.0e-47	60.87	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
W9SQ68_9ROSA	9.5e-46	59.04	Uncharacterized protein OS=Morus notabilis GN=L484_027115 PE=4 SV=1	[more]
A0A161ZN36_DAUCA	1.1e-44	56.99	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025887 PE=4 SV=1	[more]

BLAST of Lsi09G009390 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17350.1	9.5e-29	40.72	unknown protein	[more]
AT3G03280.1	1.6e-28	43.17	unknown protein	[more]
AT4G37240.1	2.1e-07	27.56	unknown protein	[more]
AT2G23690.1	3.0e-06	29.03	unknown protein	[more]

BLAST of Lsi09G009390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708503\|ref\|XP_011656216.1\|	2.9e-88	88.65	PREDICTED: uncharacterized protein LOC105435675 [Cucumis sativus]	[more]
gi\|659121124\|ref\|XP_008460510.1\|	3.6e-86	85.56	PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo]	[more]
gi\|970009033\|ref\|XP_015065378.1\|	8.6e-48	59.47	PREDICTED: uncharacterized protein LOC107010615 [Solanum pennellii]	[more]
gi\|565382966\|ref\|XP_006357799.1\|	8.6e-48	57.73	PREDICTED: uncharacterized protein LOC102602533 [Solanum tuberosum]	[more]
gi\|723670004\|ref\|XP_010316076.1\|	4.3e-47	60.87	PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G009390.1	Lsi09G009390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..178 score: 3.3
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..184 score: 3.7
None	No IPR available	PANTHER	PTHR33052:SF31	SUBFAMILY NOT NAMED	coord: 2..184 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G009390	Csa5G416270	Cucumber (Chinese Long) v2	culsiB330
Lsi09G009390	CSPI05G14860	Wild cucumber (PI 183967)	cpilsiB330
Lsi09G009390	Cucsa.034800	Cucumber (Gy14) v1	cgylsiB008
Lsi09G009390	CmaCh15G007370	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G009390	CmaCh04G023020	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G009390	CmoCh15G007610	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G009390	CmoCh04G024050	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G009390	Cla019769	Watermelon (97103) v1	lsiwmB009
Lsi09G009390	MELO3C022841	Melon (DHL92) v3.5.1	lsimeB014
Lsi09G009390	ClCG03G008750	Watermelon (Charleston Gray)	lsiwcgB014
Lsi09G009390	MELO3C022841.2	Melon (DHL92) v3.6.1	lsimedB015
Lsi09G009390	Cla97C03G059970	Watermelon (97103) v2	lsiwmbB013
Lsi09G009390	Cp4.1LG01g19910	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G009390	Cp4.1LG13g05220	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G009390	CsGy5G014750	Cucumber (Gy14) v2	cgyblsiB302
Lsi09G009390	Carg18262	Silver-seed gourd	carlsiB480
Lsi09G009390	Carg01470	Silver-seed gourd	carlsiB754
Lsi09G009390	CsaV3_5G023980	Cucumber (Chinese Long) v3	cuclsiB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G009390	Wax gourd	lsiwgoB009