CsaV3_5G023980 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G023980
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	DUF4228 domain-containing protein
Location	chr5 : 18596103 .. 18597416 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTGTATTTGGCAATGTTCCACGCGTAATTAGCAATAATGTCAATCCTTTACTTTTGCTTTGAAAATCAACTGATTCCACATTTCCATCCGCCTTGTGACTTTTCCAATTATTATCACTATCTCTTTTCTTTCCCATTATATATATAATTCCTTAACTTCTAACTCTTCCTATCAGCCATTTTCATTTCTACATTTCTTCACGACAATTATTTTGCCTTTTTCTAATTTCATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGATAGGAAATTGGGGGAGATTTTAAAAGCTATTTGATTTGTTCGTAATTTGTTTTTATTGGGGATTTTTCTTTTCGAAATTAGTGAAAGGGAAAACCCATTTGTTGATTAATTTGTATTATGGAAAAATTAGTTGAAATTAGGCTTTTGAAATCTTTCACGTGCTCAAAGAACGTGAAAACATTTCTGTAATTATGTACAATATCTCGTTCATTACTTTTAGCTTCTCTTGTAAACTAAATATTTTATTTTTATTTTAAGAGTTTTTTTCAAAATTATAACAAAAACCTAAAATTATTTAACAACAATTTTGAAAATGAAAAAAACTCACAAGTCCACGATCCAAAATAACATAAATATTGCGCTATTAATCAACAACATGCGCACAAAAAATTCTAATTTAAAAAATAGTATATTATAATCTAACATATCCTTTAGATATTAATATACGATAAAAAATAGTTTAAATCTATCATTTATCTATCAATGATAGAGAACGATAATTGTATATCTCTAAATCTATTTGAA

mRNA sequence

ATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGA

Coding sequence (CDS)

ATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGA

Protein sequence

MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLHLGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGDSTVCVWPEVETEESKPKLKLDGGDDEDDDDLEGFSPVPEFAHRRSMCRSRKPLLETIAEEPICSR

Homology

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BLAST of CsaV3_5G023980 vs. NCBI nr
Match: XP_011656216.1 (PREDICTED: uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical protein Csa_5G416270 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 2.0e-93
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180
           STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

Query: 181 PICSR 186
           PICSR
Sbjct: 181 PICSR 185

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BLAST of CsaV3_5G023980 vs. NCBI nr
Match: XP_008460510.1 (PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78
Identity = 163/187 (87.17%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTLST IG K S+SSTTTVIFPSGQIRHFHES+KAAELMFEIPNFFLVNSQSLH
Sbjct: 1   MGNYISCTLSTPIGVKPSSSSTTTVIFPSGQIRHFHESVKAAELMFEIPNFFLVNSQSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           LGRRFSALMADEDLEMGNLYLMFPM KVNSVVSVADMGALFLAAERVSG  KRRI+GGGD
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMKKVNSVVSVADMGALFLAAERVSGRNKRRIIGGGD 120

Query: 121 STVCVWPEVETE--ESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIA 180
           STVCVWPEVETE            XXXXXXXX+EGFSPVPEF HRRSMCRSRKPLLETIA
Sbjct: 121 STVCVWPEVETEXXXXXXXXXXXXXXXXXXXXVEGFSPVPEFGHRRSMCRSRKPLLETIA 180

Query: 181 EEPICSR 186
           EEP+CSR
Sbjct: 181 EEPVCSR 187

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BLAST of CsaV3_5G023980 vs. NCBI nr
Match: XP_022990804.1 (uncharacterized protein LOC111487586 [Cucurbita maxima])

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 135/184 (73.37%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+SCTLST IG K S+   TTV+FPSG++R FHE +KAAELMFE+P+FF+VNSQS+ 
Sbjct: 1   MGNYVSCTLSTPIGRKPSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           +GRRFSALMADEDLEMGNLY+MFPM KVNSVVSV DMGAL LAAERVSG KKRRIVGGG+
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALLLAAERVSGRKKRRIVGGGE 120

Query: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180
           S V V P+VE EES+ KLK+DG        +EGFSPVPE AHRR+MCR +KPLLETI EE
Sbjct: 121 SNVRVCPKVEAEESEMKLKMDG-------DVEGFSPVPELAHRRTMCRLKKPLLETIVEE 177

Query: 181 PICS 185
           P+CS
Sbjct: 181 PMCS 177

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BLAST of CsaV3_5G023980 vs. NCBI nr
Match: XP_022959522.1 (uncharacterized protein LOC111460504 [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 6.6e-68
Identity = 134/184 (72.83%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+SCTLST IG KSS+   TTV+FPSG++R FHE +KAAELMFE+P+FF+VNSQS+ 
Sbjct: 1   MGNYVSCTLSTPIGRKSSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           +GRRFSALMADEDLEMGNLY+MFPM KVNSVVSV DMG L LAAERVS  KKRRIVGGG+
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGVLLLAAERVSDRKKRRIVGGGE 120

Query: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180
           S VCV P+VE EES+ KLK+D         +E FSPVPE AHRR+MCR RKPLLETI EE
Sbjct: 121 SNVCVCPKVEAEESEMKLKMD-------DEVERFSPVPELAHRRTMCRLRKPLLETIVEE 177

Query: 181 PICS 185
           P+CS
Sbjct: 181 PMCS 177

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BLAST of CsaV3_5G023980 vs. NCBI nr
Match: XP_023534199.1 (uncharacterized protein LOC111795830 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 133/184 (72.28%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+SCTL T IG K S+   TTV+FPSG++R FHE +KAAELMFE+P+FF+VNSQS+ 
Sbjct: 1   MGNYVSCTLPTPIGRKPSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           +GRRFSALMADEDLEMGNLY+MFPM KVNSVVSV DMG L LAAERVSG KKRRIVGGG+
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGVLLLAAERVSGRKKRRIVGGGE 120

Query: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180
           S VCV P+VE EES+ KLK+D         +E FSPVPE AHRR+MCR RKPLLETI EE
Sbjct: 121 SNVCVCPKVEAEESEMKLKMD-------DDVERFSPVPELAHRRTMCRLRKPLLETIVEE 177

Query: 181 PICS 185
           P+CS
Sbjct: 181 PMCS 177

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BLAST of CsaV3_5G023980 vs. TAIR10
Match: AT3G03280.1 (unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-26
Identity = 76/188 (40.43%), Postives = 108/188 (57.45%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+SC L+     K+S+S    VI P G +R  H   KAAELM E+P++FLV+++S+ 
Sbjct: 1   MGNYVSCALN-----KTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVK 60

Query: 61  LGRRFSALMADEDLEMG--NLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGG 120
           +GR+F  L AD+DL++G  ++Y+ FPM +  S  + +DM  L+L       GKKR    G
Sbjct: 61  VGRKFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLT------GKKRTKNCG 120

Query: 121 GDSTVCVWPEVETEES----KPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLL 180
                 V PE E  +      PKL L+         +E FS   EF HR S+ +S+KP L
Sbjct: 121 HRR---VSPENEDNDDVRLIGPKLNLE--------DIEEFS-AAEFIHRISVSKSKKPQL 165

Query: 181 ETIAEEPI 183
           ETIAE+ +
Sbjct: 181 ETIAEDHV 165

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BLAST of CsaV3_5G023980 vs. TAIR10
Match: AT5G17350.1 (unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 71/193 (36.79%), Postives = 107/193 (55.44%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+S  LS +            VI P G +R+ H  +KAAELM EIP+FFLV+++SL 
Sbjct: 1   MGNYVSSALSKTXXXXXXXXK---VILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLK 60

Query: 61  LGRRFSALMADEDLEMG--NLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGG 120
           +GR+F  L AD+DL++   ++Y+ FPM +  S  + +D+  LF+AA++    ++R  VG 
Sbjct: 61  IGRKFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKK----QRRHRVGS 120

Query: 121 GDSTVC---------VWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRS 180
             S+           V P+ E ++ K    +          +E FS   EF HR S+ +S
Sbjct: 121 DHSSAAVKHCHNNGRVSPDGEGDDVK---VISAGSKLNLEDIEEFS-AAEFMHRISVSKS 180

Query: 181 RKPLLETIAEEPI 183
           +KP LETI EE +
Sbjct: 181 KKPKLETIVEESL 182

[Close]

BLAST of CsaV3_5G023980 vs. TAIR10
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 31/125 (24.80%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 16  KSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLHLGRRFSALMADEDLE 75
           +S+  +T  +I   G++  F   +K   ++ + P  F+ NS  +      +A+ ADE+L+
Sbjct: 8   ESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQ 67

Query: 76  MGNLYLMFPMNKVNSVVSVADMGALFLAA-----------------ERVSGGKKRRIVGG 124
           +G +Y   P+  +   +   +M AL + A                 E +   K R  VG 
Sbjct: 68  LGQIYFALPLCWLRQPLKAEEMAALAVKASSXXXXXXXXXCRRKCVEPIVSDKLRMRVGS 127

[Close]

BLAST of CsaV3_5G023980 vs. TAIR10
Match: AT2G23690.1 (unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 26/98 (26.53%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 16  KSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLHLGRRFSALMADEDLE 75
           +S+  +T  +I   G++  F   +K   ++ + P  F+ NS  +      SA+ ADE+ +
Sbjct: 8   ESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQ 67

Query: 76  MGNLYLMFPMNKVNSVVSVADMGALFLAAERV---SGG 111
           +G LY   P++ ++  +   +M AL + A      SGG
Sbjct: 68  LGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGG 105

[Close]

BLAST of CsaV3_5G023980 vs. TAIR10
Match: AT5G66580.1 (unknown protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04
Identity = 26/98 (26.53%), Postives = 47/98 (47.96%), Query Frame = 0


Query: 16  KSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLHLGRRFSALMADEDLE 75
           +S  S +  +I   G ++ F   +K  +++ + P  F+ NS  +      SA+  +E+L 
Sbjct: 8   ESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELR 67

Query: 76  MGNLYLMFPMNKVNSVVSVADMGALFLAAERV---SGG 111
            G LY + P+  +N  +   +M AL + A      SGG
Sbjct: 68  SGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGG 105

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BLAST of CsaV3_5G023980 vs. TrEMBL
Match: tr|A0A0A0KN52|A0A0A0KN52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180
           STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

Query: 181 PICSR 186
           PICSR
Sbjct: 181 PICSR 185

[Close]

BLAST of CsaV3_5G023980 vs. TrEMBL
Match: tr|A0A1S3CCM8|A0A1S3CCM8_CUCME (uncharacterized protein LOC103499309 OS=Cucumis melo OX=3656 GN=LOC103499309 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 9.4e-79
Identity = 163/187 (87.17%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTLST IG K S+SSTTTVIFPSGQIRHFHES+KAAELMFEIPNFFLVNSQSLH
Sbjct: 1   MGNYISCTLSTPIGVKPSSSSTTTVIFPSGQIRHFHESVKAAELMFEIPNFFLVNSQSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120
           LGRRFSALMADEDLEMGNLYLMFPM KVNSVVSVADMGALFLAAERVSG  KRRI+GGGD
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMKKVNSVVSVADMGALFLAAERVSGRNKRRIIGGGD 120

Query: 121 STVCVWPEVETE--ESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSRKPLLETIA 180
           STVCVWPEVETE            XXXXXXXX+EGFSPVPEF HRRSMCRSRKPLLETIA
Sbjct: 121 STVCVWPEVETEXXXXXXXXXXXXXXXXXXXXVEGFSPVPEFGHRRSMCRSRKPLLETIA 180

Query: 181 EEPICSR 186
           EEP+CSR
Sbjct: 181 EEPVCSR 187

[Close]

BLAST of CsaV3_5G023980 vs. TrEMBL
Match: tr|A0A2I4EBE6|A0A2I4EBE6_9ROSI (uncharacterized protein LOC108988073 OS=Juglans regia OX=51240 GN=LOC108988073 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.0e-46
Identity = 112/198 (56.57%), Postives = 133/198 (67.17%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTL+ + GGK S +  T VIFP G+IR FHE +KAAELM EIPN+FLVNS+SLH
Sbjct: 1   MGNYISCTLAGAPGGKHSRA--TKVIFPGGEIRKFHEPIKAAELMLEIPNYFLVNSKSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAA-----ERVSGGKKRRI 120
           +GRRFSAL ADEDLE+ N+Y+MFPM ++ SVVS ADMG LFL A       VSGGK R +
Sbjct: 61  IGRRFSALNADEDLEIANVYVMFPMKRMRSVVSAADMGVLFLTANSMANNSVSGGKVRFL 120

Query: 121 VGGGDSTVCVWPEVETEESK---------PKLKLDGXXXXXXXXLEGFSPVPEFAHRRSM 180
           +  G+S   V      E  +         PKL LD         +E FS  PEF HR SM
Sbjct: 121 LESGNSPQMVEGRTTDERMENEAAHHVEVPKLNLD--------DIEEFS-TPEFMHRLSM 180

Query: 181 CRSRKPLLETIAEEPICS 185
           CRS+KP+L+TIAEEPI S
Sbjct: 181 CRSKKPVLDTIAEEPIYS 187

[Close]

BLAST of CsaV3_5G023980 vs. TrEMBL
Match: tr|A0A2N9IK06|A0A2N9IK06_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52291 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45
Identity = 111/200 (55.50%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNY+SC LS   GGK S +  T VIFPSGQI+ FH  +KAAELM E+PNFF+VNS SL 
Sbjct: 1   MGNYVSCALSNP-GGKHSRA--TKVIFPSGQIQEFHAPIKAAELMLEMPNFFVVNSMSLQ 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVS------GGKKRR 120
           +GRRFSAL ADEDLEM N+Y+MFPM ++NS+++ ADMGALFL A   +      G   + 
Sbjct: 61  MGRRFSALNADEDLEMANVYVMFPMKRLNSIITAADMGALFLTANSAAKRGGSGGANIKA 120

Query: 121 IVGGGD-------STVCVWPEVET--EESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRS 180
           ++  GD        TV  W E ET   E+ P+L LD         +E FS  PEF HR S
Sbjct: 121 LLESGDVAKLVDGETVDDWRENETGAMEAVPRLNLD--------DIEEFSS-PEFMHRLS 180

Query: 181 MCRSRKPLLETIAEEPICSR 186
           MCRS+KPLLETIAEEP+CSR
Sbjct: 181 MCRSKKPLLETIAEEPVCSR 188

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BLAST of CsaV3_5G023980 vs. TrEMBL
Match: tr|M1D0F5|M1D0F5_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102602533 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 110/195 (56.41%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60
           MGNYISCTLS   G K S      VIFPSG+IRHF++ +KAAE+M E PNFFLVN++SLH
Sbjct: 1   MGNYISCTLSGPGGNKQSRG--VKVIFPSGEIRHFYQPIKAAEIMMETPNFFLVNTRSLH 60

Query: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGG-- 120
           +GRRFSAL ADEDLEMGN+Y+MFPM +VNS VS ADMGAL L A  VS   KR  +G   
Sbjct: 61  IGRRFSALNADEDLEMGNVYVMFPMKRVNSFVSAADMGALLLTANSVS---KRMSIGSLR 120

Query: 121 --GDSTVCVWPEVETE------ESKPKLKLDGXXXXXXXXLEGFSPVPEFAHRRSMCRSR 180
              +S V    +++ +       + PKL LD         +E FS   +F HR SMCRS+
Sbjct: 121 ILPESLVAETEQIQIQGNYYEKSTLPKLNLD--------DIEDFSS-EQFKHRLSMCRSK 180

Query: 181 KPLLETIAEEPICSR 186
           KPLLETIAEEP+CSR
Sbjct: 181 KPLLETIAEEPVCSR 181

The following BLAST results are available for this feature:

BLAST of CsaV3_5G023980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656216.1	2.0e-93	100.00	PREDICTED: uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hy...	[more]
XP_008460510.1	1.4e-78	87.17	PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo]	[more]
XP_022990804.1	1.3e-68	73.37	uncharacterized protein LOC111487586 [Cucurbita maxima]	[more]
XP_022959522.1	6.6e-68	72.83	uncharacterized protein LOC111460504 [Cucurbita moschata]	[more]
XP_023534199.1	1.5e-67	72.28	uncharacterized protein LOC111795830 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G023980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03280.1	4.4e-26	40.43	unknown protein	[more]
AT5G17350.1	1.1e-24	36.79	unknown protein	[more]
AT4G37240.1	2.3e-06	24.80	unknown protein	[more]
AT2G23690.1	2.5e-05	26.53	unknown protein	[more]
AT5G66580.1	1.6e-04	26.53	unknown protein	[more]

BLAST of CsaV3_5G023980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G023980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KN52\|A0A0A0KN52_CUCSA	1.3e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1	[more]
tr\|A0A1S3CCM8\|A0A1S3CCM8_CUCME	9.4e-79	87.17	uncharacterized protein LOC103499309 OS=Cucumis melo OX=3656 GN=LOC103499309 PE=...	[more]
tr\|A0A2I4EBE6\|A0A2I4EBE6_9ROSI	8.0e-46	56.57	uncharacterized protein LOC108988073 OS=Juglans regia OX=51240 GN=LOC108988073 P...	[more]
tr\|A0A2N9IK06\|A0A2N9IK06_FAGSY	1.8e-45	55.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52291 PE=4 SV=1	[more]
tr\|M1D0F5\|M1D0F5_SOLTU	2.3e-45	56.41	Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102602533 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G023980.1	CsaV3_5G023980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..179 e-value: 8.3E-31 score: 107.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..156
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..185
None	No IPR available	PANTHER	PTHR33052:SF31	SUBFAMILY NOT NAMED	coord: 1..185

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G023980	CSPI05G14860	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G023980	Cucsa.034800	Cucumber (Gy14) v1	cgycucB010
CsaV3_5G023980	CmaCh15G007370	Cucurbita maxima (Rimu)	cmacucB0343
CsaV3_5G023980	CmaCh04G023020	Cucurbita maxima (Rimu)	cmacucB0887
CsaV3_5G023980	CmoCh15G007610	Cucurbita moschata (Rifu)	cmocucB0337
CsaV3_5G023980	CmoCh04G024050	Cucurbita moschata (Rifu)	cmocucB0876
CsaV3_5G023980	Cp4.1LG13g05220	Cucurbita pepo (Zucchini)	cpecucB0225
CsaV3_5G023980	Cp4.1LG01g19910	Cucurbita pepo (Zucchini)	cpecucB0545
CsaV3_5G023980	CsGy5G014750	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G023980	Carg18262	Silver-seed gourd	carcucB0564
CsaV3_5G023980	Carg01470	Silver-seed gourd	carcucB0869
CsaV3_5G023980	Cla019769	Watermelon (97103) v1	cucwmB407
CsaV3_5G023980	MELO3C022841	Melon (DHL92) v3.5.1	cucmeB351
CsaV3_5G023980	ClCG03G008750	Watermelon (Charleston Gray)	cucwcgB405
CsaV3_5G023980	Lsi09G009390	Bottle gourd (USVL1VR-Ls)	cuclsiB353
CsaV3_5G023980	MELO3C022841.2	Melon (DHL92) v3.6.1	cucmedB343
CsaV3_5G023980	Cla97C03G059970	Watermelon (97103) v2	cucwmbB386

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G023980	Wax gourd	cucwgoB463