CSPI05G14860 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAATTATTATCACTATCTCTTTTCTTTCCCATTATATATATAATTCCTTAACTTCTAACTCTTCCTATCAGCCATTTTCATTTCTACATTTCTTCACGACAATTATTTTGCCTTTTTCTAATTTCATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGATAGGAAATTGGGGGAGATTTTAAAAGCTATTTGATTTGTTCGTAATTTGTTTTTATTGGGGATTTTTCTTTTCGAAATTAGTGAAAGGGAAAACCCATT ATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGA ATGGGGAATTACATTTCTTGTACTCTCTCCACATCAATCGGTGGCAAATCCTCCACTTCTTCCACCACCACCGTCATCTTTCCCAGCGGCCAAATACGCCACTTTCACGAGTCCCTCAAGGCGGCCGAGCTCATGTTCGAGATCCCCAATTTCTTCCTTGTTAATTCCCAATCCCTTCATTTGGGTCGGAGATTTTCAGCTCTGATGGCCGATGAGGATCTCGAGATGGGTAATTTGTACCTTATGTTTCCCATGAACAAAGTAAATTCGGTGGTGTCTGTCGCCGATATGGGGGCTTTGTTTCTCGCGGCCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATTGTCGGCGGTGGGGATTCTACTGTTTGTGTTTGGCCGGAGGTGGAAACAGAGGAATCGAAACCGAAGTTGAAATTGGATGGTGGTGATGATGAGGATGATGATGACTTGGAGGGGTTTTCGCCGGTTCCGGAATTCGCTCATCGGAGGTCGATGTGTAGGTCGAGGAAGCCATTGTTGGAGACCATAGCTGAAGAGCCGATATGTTCAAGATGA
BLAST of CSPI05G14860 vs. TrEMBL
Match: A0A0A0KN52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G416270 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 2.6e-99 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of CSPI05G14860 vs. TrEMBL
Match: M1D0F5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030595 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45 Identity = 110/192 (57.29%), Postives = 135/192 (70.31%), Query Frame = 1
BLAST of CSPI05G14860 vs. TrEMBL
Match: K4BCR7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45 Identity = 111/185 (60.00%), Postives = 129/185 (69.73%), Query Frame = 1
BLAST of CSPI05G14860 vs. TrEMBL
Match: A0A068U377_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040209001 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44 Identity = 109/193 (56.48%), Postives = 137/193 (70.98%), Query Frame = 1
BLAST of CSPI05G14860 vs. TrEMBL
Match: A0A161ZN36_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025887 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.0e-44 Identity = 107/187 (57.22%), Postives = 132/187 (70.59%), Query Frame = 1
BLAST of CSPI05G14860 vs. TAIR10
Match: AT5G17350.1 (AT5G17350.1 unknown protein) HSP 1 Score: 122.1 bits (305), Expect = 3.6e-28 Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 1
BLAST of CSPI05G14860 vs. TAIR10
Match: AT3G03280.1 (AT3G03280.1 unknown protein) HSP 1 Score: 117.9 bits (294), Expect = 6.9e-27 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 1
BLAST of CSPI05G14860 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 35/132 (26.52%), Postives = 63/132 (47.73%), Query Frame = 1
BLAST of CSPI05G14860 vs. NCBI nr
Match: gi|778708503|ref|XP_011656216.1| (PREDICTED: uncharacterized protein LOC105435675 [Cucumis sativus]) HSP 1 Score: 369.4 bits (947), Expect = 3.7e-99 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of CSPI05G14860 vs. NCBI nr
Match: gi|659121124|ref|XP_008460510.1| (PREDICTED: uncharacterized protein LOC103499309 [Cucumis melo]) HSP 1 Score: 339.3 bits (869), Expect = 4.1e-90 Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 1
BLAST of CSPI05G14860 vs. NCBI nr
Match: gi|970009033|ref|XP_015065378.1| (PREDICTED: uncharacterized protein LOC107010615 [Solanum pennellii]) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 113/191 (59.16%), Postives = 131/191 (68.59%), Query Frame = 1
BLAST of CSPI05G14860 vs. NCBI nr
Match: gi|565382966|ref|XP_006357799.1| (PREDICTED: uncharacterized protein LOC102602533 [Solanum tuberosum]) HSP 1 Score: 191.0 bits (484), Expect = 1.8e-45 Identity = 110/192 (57.29%), Postives = 135/192 (70.31%), Query Frame = 1
BLAST of CSPI05G14860 vs. NCBI nr
Match: gi|723670004|ref|XP_010316076.1| (PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum]) HSP 1 Score: 191.0 bits (484), Expect = 1.8e-45 Identity = 111/185 (60.00%), Postives = 129/185 (69.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|