Lsi09G007020 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G007020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	PLATZ transcription factor family protein, putative
Location	chr09 : 7962579 .. 7964679 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTTCCCTTTTTCTTTTTATTTTTCCCCTCTTCTTTTTATTTATTTATTTTTAATTATCATTCTTCTTCTTCTTATTATTGTTCAGTTTTCACTTTGCAGCCGCACATACAGTCTCTATTGCCTATTCATGTTCTTCTCTCTCTGATTTCTCTTCTCCCCTTCTCTTTTTCCCTATATACTTGAAGAAATTTCCCACAATTTCAGCGTTTTTTTTTTTTTATCGATTTTTCATCGACCCAGAACTTGGGGTTCCTTCAAATTACATTTGGATATGGTGAGAATTGAAATTTCCTCTGTTTTTGCCCTTTTGGGGTGTTTTTTCTTTTAATTTCTTGTTTGTTTTGTTCAATCATGTGAATTTTTTCCACCCAGATTGTTTTTAGGTGTTATTGGATCACTTTGTTTGAGATTTTTTTGGGAATTATAAATTTGCTGATTGTTGAGAGCATAGATTGTTTATCATCCAAACATGTTCGGTTGCAATCGTTTGGTTTTGAATTTATTGTCTCCTGTCTTAGATTCATGAATTATTATCTTATAATTTCCCTCTTACTGAGTTTAGTTAGTTGATTGTGAATGATTTGAGACTGTATTTTATTGTTGTTTTATAAACAATTGCCATACCTTACATGATGAATTGGTAATTTTGACAAATTATACCTAATTTCTTTTTTTCACTTTTTGATGAGACCCCAATTTGGTATTGTTTGTAAGTTGGGATTCTCTAATCATTTGGCAGACTAGTCTTATTCACAAGCAATCATCAATGAATTTGAATTGTTTGGATATGGATTTTGCAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTTAATTCCCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGGAAAAATGAAAAGAATGTGTTTTGTATAGACTGTGGTATTGCCATCTGCAGGCATTGCCTGATATCTCATTGCGTTCATCGGCGTCTACAGATCTGTAAGTACGTTTATCAGTACGTCGTTCGTGTGCCCGACTTGCAAAACCACCTTGATTGTTGCAATATTCAGGTATCCCTTTATTACCTACTTAAATTATCCAAACTTCTAGTACTAGAGTTGTCTTTGTTACCTGTTGCTGATCGTTGTAAGTTGTGATCAAATGAAACAAGAAGTTATATAACCAATTTTCAAAAGGAACCAGAAGTTTAATCGCCATAAACGAAACAACTCTACCTCGAGAAACCAATGAATTCAATCGTAAAAGATAACTTTTTGTTGTCTTTGGTCAATTATGGTGAAGTTTTGGACTAAAGTACTGAATGTTTGATTCACAAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATTTGAGTCCTCGTCCACAATCAAAAGATTCGAAACCGTCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCTAACCGCTTCTGCTCAATCGCCTGCAAAGTAAATGAAATTCCTTCTTGTTTCTCTTTCAAGTTGTATTTCCTCTCATTCATTTCCTCACATATATGACTTGAACACGTTCCACTCCTCAACTTTACAGGTCTCTATGGTTCCAGTGGAACTTAACAATCAAAGCTGTAGATATATCGATTTGGAGTCGAATCTTAAAGACATTCCATGGAAGGAAAACCATAATCTAGAAACCAATACAAGCGAAATGGAATCGTCGTCGATCTCGGTGGCTGAATCAACTGAAGAAATTAAAGCGTGGCGAGTGAAGACCGTCTTGAATCCAAAGAAGCTTTTGCATAAAAGGAAGGGCATTCCCCATCGATCGCCTCTAAAGTAATGCCTAAAAACTAATCATGAAGATCTTCGATACCCTTTTTTCTGCCAAACCCACATTTTTTTTTCATATATCAAAGTCCTATAAGCATATAAGTATAGATATATAATAACATATATTTCACCTCTTGGTTTTTGGCTCTATATTGGATTAGTTATGTTTTAGCTTCATTTATTTTTGGCAATTTTTTGGAGATTGTATAGAAAAGGATAAAGTTGCTTGTGGAAACAATAATCAAATAATCAACCTTTTTTATCTT

mRNA sequence

CACTTTCCCTTTTTCTTTTTATTTTTCCCCTCTTCTTTTTATTTATTTATTTTTAATTATCATTCTTCTTCTTCTTATTATTGTTCAGTTTTCACTTTGCAGCCGCACATACAGTCTCTATTGCCTATTCATGTTCTTCTCTCTCTGATTTCTCTTCTCCCCTTCTCTTTTTCCCTATATACTTGAAGAAATTTCCCACAATTTCAGCGTTTTTTTTTTTTTATCGATTTTTCATCGACCCAGAACTTGGGGTTCCTTCAAATTACATTTGGATATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTTAATTCCCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGGAAAAATGAAAAGAATGTGTTTTGTATAGACTGTGGTATTGCCATCTGCAGGCATTGCCTGATATCTCATTGCGTTCATCGGCGTCTACAGATCTGTAAGTACGTTTATCAGTACGTCGTTCGTGTGCCCGACTTGCAAAACCACCTTGATTGTTGCAATATTCAGGTCTCTATGGTTCCAGTGGAACTTAACAATCAAAGCTGTAGATATATCGATTTGGAGTCGAATCTTAAAGACATTCCATGGAAGGAAAACCATAATCTAGAAACCAATACAAGCGAAATGGAATCGTCGTCGATCTCGGTGGCTGAATCAACTGAAGAAATTAAAGCGTGGCGAGTGAAGACCGTCTTGAATCCAAAGAAGCTTTTGCATAAAAGGAAGGGCATTCCCCATCGATCGCCTCTAAAGTAATGCCTAAAAACTAATCATGAAGATCTTCGATACCCTTTTTTCTGCCAAACCCACATTTTTTTTTCATATATCAAAGTCCTATAAGCATATAAGTATAGATATATAATAACATATATTTCACCTCTTGGTTTTTGGCTCTATATTGGATTAGTTATGTTTTAGCTTCATTTATTTTTGGCAATTTTTTGGAGATTGTATAGAAAAGGATAAAGTTGCTTGTGGAAACAATAATCAAATAATCAACCTTTTTTATCTT

Coding sequence (CDS)

ATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTTAATTCCCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGGAAAAATGAAAAGAATGTGTTTTGTATAGACTGTGGTATTGCCATCTGCAGGCATTGCCTGATATCTCATTGCGTTCATCGGCGTCTACAGATCTGTAAGTACGTTTATCAGTACGTCGTTCGTGTGCCCGACTTGCAAAACCACCTTGATTGTTGCAATATTCAGGTCTCTATGGTTCCAGTGGAACTTAACAATCAAAGCTGTAGATATATCGATTTGGAGTCGAATCTTAAAGACATTCCATGGAAGGAAAACCATAATCTAGAAACCAATACAAGCGAAATGGAATCGTCGTCGATCTCGGTGGCTGAATCAACTGAAGAAATTAAAGCGTGGCGAGTGAAGACCGTCTTGAATCCAAAGAAGCTTTTGCATAAAAGGAAGGGCATTCCCCATCGATCGCCTCTAAAGTAA

Protein sequence

MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAWRVKTVLNPKKLLHKRKGIPHRSPLK

Homology

[Close]

BLAST of Lsi09G007020 vs. TrEMBL
Match: A0A0A0KPD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550220 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-48
Identity = 92/114 (80.70%), Postives = 98/114 (85.96%), Query Frame = 1


Query: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
           MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ      ++N +   ++      KD
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQT----YKINGEKAVHLSPRPQSKD 110

[Close]

BLAST of Lsi09G007020 vs. TrEMBL
Match: W9QTI6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006762 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-32
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 3   GCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHR 62
           GCK+ LKK+KTDWLN+LL SKFF SCVHH + RKNEKN+FCIDC +  CRHC+ +HC+HR
Sbjct: 32  GCKLLLKKKKTDWLNALLHSKFFDSCVHHPDYRKNEKNLFCIDCNLGFCRHCVTAHCLHR 91

Query: 63  RLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           RLQICKYVY  VVR+ D+Q HLDC  IQ      ++N +   +++     KD
Sbjct: 92  RLQICKYVYHNVVRLQDMQKHLDCSRIQT----YKINGEKAVHLNPRPQSKD 139

[Close]

BLAST of Lsi09G007020 vs. TrEMBL
Match: M5XHZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011075mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1


Query: 1  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
          M GCK+ +KK +TDWLN+LL SKFFGSC  H + RKNEKNVFCIDC I +CRHC+ +HC+
Sbjct: 1  MGGCKVCIKKNRTDWLNTLLLSKFFGSCGVHHDLRKNEKNVFCIDCSIRLCRHCMTAHCL 60

Query: 61 HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ 91
          H +LQICKYVY  VVR+ ++Q HLDC  IQ
Sbjct: 61 HTKLQICKYVYHDVVRLQEIQKHLDCSKIQ 90

[Close]

BLAST of Lsi09G007020 vs. TrEMBL
Match: A0A067KT65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04796 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
           M GCK Y++  K+DWL++LL+SKFFGSCVHH+  RKNEKNVFCIDC I +CRHCL +H +
Sbjct: 1   MVGCKFYIEN-KSDWLSTLLKSKFFGSCVHHREFRKNEKNVFCIDCNIGLCRHCLKAHSL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           HR+LQICKYVY  VVR+ D+Q HLDC  IQ      ++N +   +++     KD
Sbjct: 61  HRQLQICKYVYHDVVRLQDIQKHLDCSKIQT----YKINGEKAVHLNPRPQPKD 109

[Close]

BLAST of Lsi09G007020 vs. TrEMBL
Match: B9SNG3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1148660 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.0e-30
Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 1


Query: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
           M GCK Y+KK K DWL++LL+SKFF SC HHQ  RKNEKNVFC+DC +  CRHC+ +HC+
Sbjct: 1   MVGCKYYIKK-KEDWLSALLESKFFDSCDHHQELRKNEKNVFCMDCNLEFCRHCVKAHCL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           HR+LQICKYVY  VVR+ D+Q HLDC  IQ      ++N +   +++     KD
Sbjct: 61  HRQLQICKYVYHDVVRLQDIQKHLDCSKIQT----YKINGEKAVHLNPRPQAKD 109

[Close]

BLAST of Lsi09G007020 vs. TAIR10
Match: AT2G01818.1 (AT2G01818.1 PLATZ transcription factor family protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 1


Query: 9   KKRKTD--WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHC----LISHCVHR 68
           +KR+++  W+ +LL S+FFG C++H+  RKNEKNVFCIDC + ICRHC      SH +HR
Sbjct: 5   EKRRSEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHR 64

Query: 69  RLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           RLQICKYVYQ V+R+ ++QN+ DC  IQ      ++N +   +++     KD
Sbjct: 65  RLQICKYVYQDVIRLLEIQNYFDCSEIQT----YKINGEKAIHLNSRPQAKD 112

[Close]

BLAST of Lsi09G007020 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-19
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1


Query: 15 WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYV 74
          WL  LL+ KFF +C+ H++++KNEKN+ CIDC + IC HCL SH  HR LQI +YVY+ V
Sbjct: 9  WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 75 VRVPDLQNHLDCCNIQ 91
          +RV D    +DC  IQ
Sbjct: 69 LRVEDGSKLMDCSLIQ 84

[Close]

BLAST of Lsi09G007020 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein)

HSP 1 Score: 90.9 bits (224), Expect = 8.3e-19
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 1


Query: 11 RKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYV 70
          +K  WL++L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4  QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71 YQYVVRVPDLQNHLDCCNIQ 91
          Y  VVR+ DLQ  +DC N+Q
Sbjct: 64 YHDVVRLEDLQKLIDCSNVQ 83

[Close]

BLAST of Lsi09G007020 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein)

HSP 1 Score: 84.7 bits (208), Expect = 6.0e-17
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 1


Query: 12 KTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVY 71
          K  WL  L+   FF SC  H+  RK+EKNVFC+ C +++C HCL SH  H  LQ+ +YVY
Sbjct: 18 KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 72 QYVVRVPDLQNHLDCCNIQ 91
            VVR+ DL+  +DC  +Q
Sbjct: 78 HDVVRLSDLEKLIDCSYVQ 96

[Close]

BLAST of Lsi09G007020 vs. TAIR10
Match: AT1G43000.1 (AT1G43000.1 PLATZ transcription factor family protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1


Query: 15 WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDC-GIAICRHCLISHCVHRRLQICKYVYQY 74
          WL  +L++ +F +C  H  + K+E N+FC+DC G A C  CL  H  HR +QI +  Y  
Sbjct: 11 WLTPMLRADYFVTCSIHSQSSKSECNLFCLDCSGNAFCSSCLAHHRTHRVIQIRRSSYHN 70

Query: 75 VVRVPDLQNHLDCCNIQVSMV 95
          VVRV ++Q H+D   IQ  ++
Sbjct: 71 VVRVSEIQKHIDISCIQTYVI 91

[Close]

BLAST of Lsi09G007020 vs. NCBI nr
Match: gi|449450143|ref|XP_004142823.1| (PREDICTED: uncharacterized protein LOC101210438 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 8.0e-48
Identity = 92/114 (80.70%), Postives = 98/114 (85.96%), Query Frame = 1


Query: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
           MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ      ++N +   ++      KD
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQT----YKINGEKAVHLSPRPQSKD 110

[Close]

BLAST of Lsi09G007020 vs. NCBI nr
Match: gi|659072774|ref|XP_008467074.1| (PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-47
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 1


Query: 1  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
          MAGCKI+LKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV
Sbjct: 1  MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61 HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ 91
          HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ
Sbjct: 61 HRRLQICKYVYQYVVRVPDLQDHLDCCNIQ 90

[Close]

BLAST of Lsi09G007020 vs. NCBI nr
Match: gi|703087559|ref|XP_010093304.1| (hypothetical protein L484_006762 [Morus notabilis])

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-32
Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 3   GCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHR 62
           GCK+ LKK+KTDWLN+LL SKFF SCVHH + RKNEKN+FCIDC +  CRHC+ +HC+HR
Sbjct: 32  GCKLLLKKKKTDWLNALLHSKFFDSCVHHPDYRKNEKNLFCIDCNLGFCRHCVTAHCLHR 91

Query: 63  RLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           RLQICKYVY  VVR+ D+Q HLDC  IQ      ++N +   +++     KD
Sbjct: 92  RLQICKYVYHNVVRLQDMQKHLDCSRIQT----YKINGEKAVHLNPRPQSKD 139

[Close]

BLAST of Lsi09G007020 vs. NCBI nr
Match: gi|802596746|ref|XP_012072352.1| (PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas])

HSP 1 Score: 139.0 bits (349), Expect = 7.5e-30
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1


Query: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
           M GCK Y++  K+DWL++LL+SKFFGSCVHH+  RKNEKNVFCIDC I +CRHCL +H +
Sbjct: 1   MVGCKFYIEN-KSDWLSTLLKSKFFGSCVHHREFRKNEKNVFCIDCNIGLCRHCLKAHSL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLESNLKD 115
           HR+LQICKYVY  VVR+ D+Q HLDC  IQ      ++N +   +++     KD
Sbjct: 61  HRQLQICKYVYHDVVRLQDIQKHLDCSKIQT----YKINGEKAVHLNPRPQPKD 109

[Close]

BLAST of Lsi09G007020 vs. NCBI nr
Match: gi|596216967|ref|XP_007223932.1| (hypothetical protein PRUPE_ppa011075mg [Prunus persica])

HSP 1 Score: 139.0 bits (349), Expect = 7.5e-30
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 1


Query: 1  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60
          M GCK+ +KK +TDWLN+LL SKFFGSC  H + RKNEKNVFCIDC I +CRHC+ +HC+
Sbjct: 1  MGGCKVCIKKNRTDWLNTLLLSKFFGSCGVHHDLRKNEKNVFCIDCSIRLCRHCMTAHCL 60

Query: 61 HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ 91
          H +LQICKYVY  VVR+ ++Q HLDC  IQ
Sbjct: 61 HTKLQICKYVYHDVVRLQEIQKHLDCSKIQ 90

The following BLAST results are available for this feature:

BLAST of Lsi09G007020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G007020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD0_CUCSA	5.6e-48	80.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550220 PE=4 SV=1	[more]
W9QTI6_9ROSA	1.1e-32	58.04	Uncharacterized protein OS=Morus notabilis GN=L484_006762 PE=4 SV=1	[more]
M5XHZ9_PRUPE	5.3e-30	65.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011075mg PE=4 SV=1	[more]
A0A067KT65_JATCU	5.3e-30	56.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04796 PE=4 SV=1	[more]
B9SNG3_RICCO	9.0e-30	55.26	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1148660 PE=4 SV=1	[more]

BLAST of Lsi09G007020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01818.1	1.7e-24	47.32	PLATZ transcription factor family protein	[more]
AT3G60670.1	3.7e-19	53.95	PLATZ transcription factor family protein	[more]
AT2G12646.1	8.3e-19	48.75	PLATZ transcription factor family protein	[more]
AT1G31040.1	6.0e-17	48.10	PLATZ transcription factor family protein	[more]
AT1G43000.1	2.6e-12	40.74	PLATZ transcription factor family protein	[more]

BLAST of Lsi09G007020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450143\|ref\|XP_004142823.1\|	8.0e-48	80.70	PREDICTED: uncharacterized protein LOC101210438 [Cucumis sativus]	[more]
gi\|659072774\|ref\|XP_008467074.1\|	2.3e-47	97.78	PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo]	[more]
gi\|703087559\|ref\|XP_010093304.1\|	1.6e-32	58.04	hypothetical protein L484_006762 [Morus notabilis]	[more]
gi\|802596746\|ref\|XP_012072352.1\|	7.5e-30	56.14	PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]	[more]
gi\|596216967\|ref\|XP_007223932.1\|	7.5e-30	65.56	hypothetical protein PRUPE_ppa011075mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G007020.1	Lsi09G007020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 28..66 score: 9
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 9..90 score: 3.1
None	No IPR available	PANTHER	PTHR31065:SF15	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 9..90 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G007020	Csa5G550220	Cucumber (Chinese Long) v2	culsiB329
Lsi09G007020	CSPI05G19150	Wild cucumber (PI 183967)	cpilsiB329
Lsi09G007020	Cucsa.012070	Cucumber (Gy14) v1	cgylsiB316
Lsi09G007020	CmaCh04G021370	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G007020	CmoCh04G022300	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G007020	Cla005803	Watermelon (97103) v1	lsiwmB028
Lsi09G007020	MELO3C005262	Melon (DHL92) v3.5.1	lsimeB008
Lsi09G007020	ClCG01G006660	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G007020	MELO3C005262.2	Melon (DHL92) v3.6.1	lsimedB008
Lsi09G007020	Cla97C01G006960	Watermelon (97103) v2	lsiwmbB007
Lsi09G007020	Bhi12G000839	Wax gourd	lsiwgoB006
Lsi09G007020	Cp4.1LG01g18550	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G007020	Carg25248	Silver-seed gourd	carlsiB799
Lsi09G007020	CsaV3_5G027910	Cucumber (Chinese Long) v3	cuclsiB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G007020	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G007020	Cucumber (Gy14) v2	cgyblsiB301
Lsi09G007020	Silver-seed gourd	carlsiB754
Lsi09G007020	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G007020	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G007020	Cucurbita pepo (Zucchini)	cpelsiB130