Cp4.1LG01g18550 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g18550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	PLATZ transcription factor family protein, putative
Location	Cp4.1LG01 : 15801390 .. 15803575 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTATTTTATTATTATTTTTATTATTCAGTTTTCACTCTGCAGCCGCATAAACAGTCAGTCTCTATTGTCTCTTCATTTTTCTTCTCTATCTGATTTCTCTTCTCCCCTTCCCTTTTTCCCAATATATTGAAGAAATTTCCCAGAAATTCATTGTTTTTTATCGGTTTTTCGACGACCCAGAAGTGGGATTTGCTTCGATTTGAATTGTATATGGTGAGATTTGAGTTTCCTCTGTATTTTGCTGTCTTGGGGATGTTTTTCTCCAGGGGTTTTCCTTTTAATTTCTTCTTTGTCTTGTTCATCATCGAATGTTGTTTTTGGGTGTTATTGGATCACTTTGTTTGAGCCTTTCTTACAGTTTTCCGATTATTGAGGAACATGTTTGGCTGTAATCGTTGGATTTATAATTTTGTGTTTTGTGTTTTAGATGCTTCAAGTATCGTATAATTTTGGAATTAGGAGTTTAGTTGTTTGATTGTGACTGATTTGAGAGTATAATCTATTGTTTTTATTCAAACAATTGCCAGACCCTAATGATGTTTAAATTGATGATGTTTGATTTGATGATGTTTAATTTGGATTGTTTGGATTTGCATTTTGGCAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCTCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTATGTCGTTCGTGTTCCCGACTTGCAGAATCATCTTGATTGTTGCAATATTCAGGTATTCCTTTGTTACCTCCTTAAATTATACAAACTTCTTGTCCTAAAGCTGTCTTTTGTCTTGTTAGCTGTTGCTTCTGGTTGCATGTTTTGATCAAATGAATAAGAAGCATTATAAACCATTTTGAAAGCCAAGGAACCATTGAATTCAACCATAAAACAGCACTGTTTTGTGTTTGGGACATTGGAATTTCTATTAGCCAATGATTAGGTTTGTCAGCGATGCGTTAGTACAAGTAAGAACGAACTACCTACCGTAGGTTGACCTAGTGATCGAGAAGAGATACGTAAACAATAAAGAGCTTAGAGCAAATATGTACGAGTCACAATGACTAACCGTGTAGGATCTAATGTCCTGTGAATTATCTTGGCAATCAAATATAGTAAGGTCAGTTAGTTGTCTGATAAGAACATTCGAGTTGCAGACACTCGATTTATAAGATGAGATAACAATGATTTAACTTGCTCATCTAAATGTATAGTTTCTTATATCCATCCCCTCCACCTAAGTTGATTATGTTAAAGTTTGGGACTTTGATTCACCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTAAATAAAACTTTCTTTAACTTGTAGACTCTCATTCACTTGCACATAAATGACATGAAGATGTGCCATTGATGAACTTTTTCAGGTCTCTATGGTTCCAGTGGAACTCAACAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAACACGAGCGAAATGAAATCGTCCATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAATACCGAAACACTAATCGTGATATCATTATGATGATCTTTAATACCCCTTTTGCTCCCAAACCCACATTTTTTGATATATGAAAGTCCTATAAGCATATAGTTATAGATATCTATATATAATAACATATATTTCACCTCTTGCATTGGCTCTATATTGGATTAGTTGNTTTTTTTTTTTCCTGTCAATTTTTTGGAGGTTGTATAGAGAAGGATTGATTGTGTTGGTTGTTGAAACAATAATCAAATTATCAACCTTTTGGATTATATCCTTTTGGTT

mRNA sequence

TTATTATTTTATTATTATTTTTATTATTCAGTTTTCACTCTGCAGCCGCATAAACAGTCAGTCTCTATTGTCTCTTCATTTTTCTTCTCTATCTGATTTCTCTTCTCCCCTTCCCTTTTTCCCAATATATTGAAGAAATTTCCCAGAAATTCATTGTTTTTTATCGGTTTTTCGACGACCCAGAAGTGGGATTTGCTTCGATTTGAATTGTATATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCTCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTATGTCGTTCGTGTTCCCGACTTGCAGAATCATCTTGATTGTTGCAATATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTCTCTATGGTTCCAGTGGAACTCAACAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAACACGAGCGAAATGAAATCGTCCATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAATACCGAAACACTAATCGTGATATCATTATGATGATCTTTAATACCCCTTTTGCTCCCAAACCCACATTTTTTGATATATGAAAGTCCTATAAGCATATAGTTATAGATATCTATATATAATAACATATATTTCACCTCTTGCATTGGCTCTATATTGGATTAGTTGNTTTTTTTTTTTCCTGTCAATTTTTTGGAGGTTGTATAGAGAAGGATTGATTGTGTTGGTTGTTGAAACAATAATCAAATTATCAACCTTTTGGATTATATCCTTTTGGTT

Coding sequence (CDS)

ATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCAGATTGGCTTAGTTCTCTATTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGAAAAAATGAAAAGAATGTGTTTTGCATAGATTGTGGTATTGCCATCTGCAGGCATTGCTTGATATCTCATTGCATTCATCGGCGTTTACAGATCTGCAAGTATGTTTATCAGTATGTCGTTCGTGTTCCCGACTTGCAGAATCATCTTGATTGTTGCAATATTCAGACTTATAAGATAAATGGGGAGAAGGCTGTTCATCTGAGTCCCCGGCCACAATCGAAAGACTCGAAACCATCGACAAAATTGAAGTTTGGAGGTACTTGTGAAGCTTGTGGGAGATACATACAAGACTTGCCAAACCGCTTCTGTTCGATCGCTTGCAAAGTCTCTATGGTTCCAGTGGAACTCAACAATCAAAGCTGTAGATGCATCACATCAAAGTCGGATCCGAACGAGATTTCATGGAAGGAGAATCACAATGTAGAACCCAACACGAGCGAAATGAAATCGTCCATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCAAGTGAAGTCAGGGTTGAATCCAAGGAAGCTTTTGCATAAAAGGAAGGGCATCCCACATCGATCGCCTTTAAAGTAA

Protein sequence

MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK

Homology

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BLAST of Cp4.1LG01g18550 vs. TrEMBL
Match: A0A0A0KPD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550220 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 9.0e-115
Identity = 200/225 (88.89%), Postives = 213/225 (94.67%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR + S+ +  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK  LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

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BLAST of Cp4.1LG01g18550 vs. TrEMBL
Match: W9QTI6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006762 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 150/222 (67.57%), Postives = 176/222 (79.28%), Query Frame = 1


Query: 3   GCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHR 62
           GCK+ LKK+K DWL++LL SKFF SCVHH + RKNEKN+FCIDC +  CRHC+ +HC+HR
Sbjct: 32  GCKLLLKKKKTDWLNALLHSKFFDSCVHHPDYRKNEKNLFCIDCNLGFCRHCVTAHCLHR 91

Query: 63  RLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 122
           RLQICKYVY  VVR+ D+Q HLDC  IQTYKINGEKAVHL+PRPQSKD+KPSTK    G+
Sbjct: 92  RLQICKYVYHNVVRLQDMQKHLDCSRIQTYKINGEKAVHLNPRPQSKDAKPSTKSFCAGS 151

Query: 123 CEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSK-SDPNEISWKENHNVEPNTS 182
           CEACGRYIQD PNRFCSIACKVS+VP+E  +QS   IT       ++S+KEN N E N S
Sbjct: 152 CEACGRYIQDPPNRFCSIACKVSLVPLEPKDQSQNFITVPIPQYGDLSFKENCNSETNLS 211

Query: 183 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
           EM+SS+S+AES EE+ A  V S L PRKLL KRKGIP R+PL
Sbjct: 212 EMESSLSLAESGEEVHACWVSSALKPRKLLRKRKGIPFRAPL 253

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BLAST of Cp4.1LG01g18550 vs. TrEMBL
Match: M5XHZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011075mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 146/224 (65.18%), Postives = 178/224 (79.46%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           M GCK+ +KK + DWL++LL SKFFGSC  H + RKNEKNVFCIDC I +CRHC+ +HC+
Sbjct: 1   MGGCKVCIKKNRTDWLNTLLLSKFFGSCGVHHDLRKNEKNVFCIDCSIRLCRHCMTAHCL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           H +LQICKYVY  VVR+ ++Q HLDC  IQTYKINGEKAVHL+PRP +KD+KPSTK KFG
Sbjct: 61  HTKLQICKYVYHDVVRLQEIQKHLDCSKIQTYKINGEKAVHLNPRPLAKDAKPSTKAKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCI-TSKSDPNEISWKENHNVEPN 180
            +CEACGRY+QD+PNR+CSIACK S+VPV+  +QS + I  +     + S K N N E N
Sbjct: 121 ASCEACGRYLQDMPNRYCSIACKASIVPVKPEDQSHKFIAVTIPQYGDFSLKGNCNSETN 180

Query: 181 TSEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
            SEM+SSIS+AES+EE+ AW V S L PRKLLHKRKGIPHR+PL
Sbjct: 181 MSEMESSISLAESSEEMTAW-VCSALKPRKLLHKRKGIPHRAPL 223

[Close]

BLAST of Cp4.1LG01g18550 vs. TrEMBL
Match: A0A067KT65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04796 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.1e-79
Identity = 148/225 (65.78%), Postives = 179/225 (79.56%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           M GCK Y++  K+DWLS+LL+SKFFGSCVHH+  RKNEKNVFCIDC I +CRHCL +H +
Sbjct: 1   MVGCKFYIEN-KSDWLSTLLKSKFFGSCVHHREFRKNEKNVFCIDCNIGLCRHCLKAHSL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HR+LQICKYVY  VVR+ D+Q HLDC  IQTYKINGEKAVHL+PRPQ KDSKPSTK KFG
Sbjct: 61  HRQLQICKYVYHDVVRLQDIQKHLDCSKIQTYKINGEKAVHLNPRPQPKDSKPSTKAKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCIT-SKSDPNEISWKENHNVEPN 180
            +CEACGRY+QDLPNRFCSIACKVS V V+  +Q  + IT S  +   +SWKEN+N E  
Sbjct: 121 ASCEACGRYLQDLPNRFCSIACKVSTVSVKPKDQKPKLITFSIQEFPNLSWKENYNQERE 180

Query: 181 TS-EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
           +S EM+S++S+ + +EE + W + S L PRK LHKRKGIP R+PL
Sbjct: 181 SSGEMESTLSLTDMSEENQEWLI-SALKPRKQLHKRKGIPRRAPL 223

[Close]

BLAST of Cp4.1LG01g18550 vs. TrEMBL
Match: B9HJI8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13660g PE=4 SV=2)

HSP 1 Score: 295.4 bits (755), Expect = 5.7e-77
Identity = 139/224 (62.05%), Postives = 173/224 (77.23%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           M GCKIY+K    DWL++LL S FF SC +HQ  RKNEKNVFCIDC +  CRHC+ SHC+
Sbjct: 1   MVGCKIYVKN--TDWLTTLLHSDFFDSCSNHQERRKNEKNVFCIDCSVGCCRHCMESHCL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HR+LQICKYVY  VVR+ ++Q HLDC  IQTYKINGEKA+HL PRPQSKD++PSTK KFG
Sbjct: 61  HRQLQICKYVYHDVVRLQEIQKHLDCSKIQTYKINGEKAIHLKPRPQSKDARPSTKAKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCIT-SKSDPNEISWKENHNVEPN 180
            +CEAC RY+QD+PNRFCSIACKVS V VEL +QS   I+ S  +   +SWKEN N E +
Sbjct: 121 ASCEACARYLQDVPNRFCSIACKVSAVSVELKDQSHEIISLSIQEFTNLSWKENPNAEKH 180

Query: 181 TSEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
           +SE +SS+S+ + +E+ + W + S L PR+ LHKRKG+P R+PL
Sbjct: 181 SSENESSLSLTDMSEDTQGW-MNSALKPRRQLHKRKGVPRRAPL 221

[Close]

BLAST of Cp4.1LG01g18550 vs. TAIR10
Match: AT2G01818.1 (AT2G01818.1 PLATZ transcription factor family protein)

HSP 1 Score: 201.8 bits (512), Expect = 4.4e-52
Identity = 107/221 (48.42%), Postives = 147/221 (66.52%), Query Frame = 1


Query: 9   KKRKAD--WLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLI----SHCIHR 68
           +KR+++  W+ +LL S+FFG C++H+  RKNEKNVFCIDC + ICRHC      SH +HR
Sbjct: 5   EKRRSEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHR 64

Query: 69  RLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 128
           RLQICKYVYQ V+R+ ++QN+ DC  IQTYKINGEKA+HL+ RPQ+KD++PSTK K G +
Sbjct: 65  RLQICKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGAS 124

Query: 129 CEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSE 188
           C  C RYIQD PN FCSI+CK+S      + +   C + K + + +  KE+   E +  E
Sbjct: 125 CVTCKRYIQDHPNLFCSISCKISTP----SKKHKFCFSPKLEQSVLE-KEHSTQEGSLEE 184

Query: 189 MKS-SISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSP 223
            KS + S+ + +E+ +         P   + KRKGI  RSP
Sbjct: 185 KKSCTSSLTDVSEDSEVLLSDFSFRPLLRILKRKGISRRSP 220

[Close]

BLAST of Cp4.1LG01g18550 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 1


Query: 11  RKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYV 70
           +K  WL +L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYI 130
           Y  VVR+ DLQ  +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMV 148
           Q+ P   CS+ CKV  V
Sbjct: 124 QE-PYIHCSLGCKVDFV 134

[Close]

BLAST of Cp4.1LG01g18550 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-28
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 1


Query: 15  WLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVYQYV 74
           WL  LL+ KFF +C+ H++++KNEKN+ CIDC + IC HCL SH  HR LQI +YVY+ V
Sbjct: 9   WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 75  VRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLP 134
           +RV D    +DC  IQ Y  N  K V ++ RPQS+  + S     G  C  C R +Q  P
Sbjct: 69  LRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGS-----GNICITCDRSLQS-P 128

Query: 135 NRFCSIACKVSMVPVELNNQS-----CRCITSKSDPNEISWKENHNVEPNTSEMKSSISM 194
             FC ++CK+S V +     S     C  +    +    +   +  +EP  S   SS S 
Sbjct: 129 YLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTT--PSSTLEPTGSNRTSSESS 188

Query: 195 AESTEEIKAWQVKSGLNPRKLLHKRK 216
               E++   Q  +     +++ K++
Sbjct: 189 GNEGEDMFWCQALACTATTEIVRKKR 206

[Close]

BLAST of Cp4.1LG01g18550 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein)

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-27
Identity = 78/233 (33.48%), Postives = 119/233 (51.07%), Query Frame = 1


Query: 12  KADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHRRLQICKYVY 71
           K  WL  L+   FF SC  H+  RK+EKNVFC+ C +++C HCL SH  H  LQ+ +YVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 72  QYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQ 131
             VVR+ DL+  +DC  +Q Y ING K + L+ R QS+    S        C  C R +Q
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRAKVSS------NVCFTCDRILQ 137

Query: 132 DLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWK----ENHNVEPNTSEMKSSI 191
           + P  FCS++CKV  +  + ++ S   I  + D ++ +++    + H+     S M+   
Sbjct: 138 E-PFHFCSLSCKVDYLSYQGDDLS--SILYRIDESDFTFEGLRMDGHDQLGEISTMEDGE 197

Query: 192 SMAESTEEI-------KAWQVKS-----------GLNPRKLLHKRKGIPHRSP 223
            +   ++E        K  + KS           G+    L ++RKG PHR+P
Sbjct: 198 DILVISDESEQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of Cp4.1LG01g18550 vs. TAIR10
Match: AT4G17900.1 (AT4G17900.1 PLATZ transcription factor family protein)

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-25
Identity = 74/221 (33.48%), Postives = 114/221 (51.58%), Query Frame = 1


Query: 9   KKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIA-ICRHCLISHCIHRRLQIC 68
           + R   WL  LL+ +FF  C  H ++ K+E N++C+DC    +C  CL  H  HR +QI 
Sbjct: 30  ENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIR 89

Query: 69  KYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACG 128
           +  Y  V+RV ++Q +LD   IQTY IN  K V L+ RPQ +  K  T      TC+ C 
Sbjct: 90  RSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVT-----NTCKVCY 149

Query: 129 RYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTSEMKSSI 188
           R + D   RFCS+ CK++              TS+        K   N+   T +  SSI
Sbjct: 150 RSLVDDSFRFCSLGCKIAG-------------TSRGFE-----KGRENLLMETEDSSSSI 209

Query: 189 SMAESTEEIKAWQ-----VKSGLNPRKLLHKRKGIPHRSPL 224
           ++ ++   ++++      + +  N R ++ +RKGIPHRSP+
Sbjct: 210 AIGKNITNLQSFSPSTPPLTTSSNCR-IVKRRKGIPHRSPM 226

[Close]

BLAST of Cp4.1LG01g18550 vs. NCBI nr
Match: gi|449450143|ref|XP_004142823.1| (PREDICTED: uncharacterized protein LOC101210438 [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 200/225 (88.89%), Postives = 213/225 (94.67%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR + S+ +  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK  LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Cp4.1LG01g18550 vs. NCBI nr
Match: gi|659072774|ref|XP_008467074.1| (PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 1.3e-114
Identity = 200/225 (88.89%), Postives = 214/225 (95.11%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           MAGCKI+LKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+
Sbjct: 1   MAGCKIFLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCV 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVPDLQ+HLDCCNIQTYKINGEKAVHL PRPQSKDSKPSTKLKFG
Sbjct: 61  HRRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLCPRPQSKDSKPSTKLKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMVP+ELNNQ CR I S+S+  +I WKENHN+E NT
Sbjct: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFIDSESNLKDIPWKENHNLEINT 180

Query: 181 SEMK-SSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 225
           SEM+ SSIS+AESTEEIKAW+VK+ LNP+KLLHKRKGIPHRSPLK
Sbjct: 181 SEMESSSISVAESTEEIKAWRVKTILNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of Cp4.1LG01g18550 vs. NCBI nr
Match: gi|703087559|ref|XP_010093304.1| (hypothetical protein L484_006762 [Morus notabilis])

HSP 1 Score: 309.7 bits (792), Expect = 4.2e-81
Identity = 150/222 (67.57%), Postives = 176/222 (79.28%), Query Frame = 1


Query: 3   GCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIHR 62
           GCK+ LKK+K DWL++LL SKFF SCVHH + RKNEKN+FCIDC +  CRHC+ +HC+HR
Sbjct: 32  GCKLLLKKKKTDWLNALLHSKFFDSCVHHPDYRKNEKNLFCIDCNLGFCRHCVTAHCLHR 91

Query: 63  RLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 122
           RLQICKYVY  VVR+ D+Q HLDC  IQTYKINGEKAVHL+PRPQSKD+KPSTK    G+
Sbjct: 92  RLQICKYVYHNVVRLQDMQKHLDCSRIQTYKINGEKAVHLNPRPQSKDAKPSTKSFCAGS 151

Query: 123 CEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSK-SDPNEISWKENHNVEPNTS 182
           CEACGRYIQD PNRFCSIACKVS+VP+E  +QS   IT       ++S+KEN N E N S
Sbjct: 152 CEACGRYIQDPPNRFCSIACKVSLVPLEPKDQSQNFITVPIPQYGDLSFKENCNSETNLS 211

Query: 183 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
           EM+SS+S+AES EE+ A  V S L PRKLL KRKGIP R+PL
Sbjct: 212 EMESSLSLAESGEEVHACWVSSALKPRKLLRKRKGIPFRAPL 253

[Close]

BLAST of Cp4.1LG01g18550 vs. NCBI nr
Match: gi|596216967|ref|XP_007223932.1| (hypothetical protein PRUPE_ppa011075mg [Prunus persica])

HSP 1 Score: 303.9 bits (777), Expect = 2.3e-79
Identity = 146/224 (65.18%), Postives = 178/224 (79.46%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           M GCK+ +KK + DWL++LL SKFFGSC  H + RKNEKNVFCIDC I +CRHC+ +HC+
Sbjct: 1   MGGCKVCIKKNRTDWLNTLLLSKFFGSCGVHHDLRKNEKNVFCIDCSIRLCRHCMTAHCL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           H +LQICKYVY  VVR+ ++Q HLDC  IQTYKINGEKAVHL+PRP +KD+KPSTK KFG
Sbjct: 61  HTKLQICKYVYHDVVRLQEIQKHLDCSKIQTYKINGEKAVHLNPRPLAKDAKPSTKAKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCI-TSKSDPNEISWKENHNVEPN 180
            +CEACGRY+QD+PNR+CSIACK S+VPV+  +QS + I  +     + S K N N E N
Sbjct: 121 ASCEACGRYLQDMPNRYCSIACKASIVPVKPEDQSHKFIAVTIPQYGDFSLKGNCNSETN 180

Query: 181 TSEMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
            SEM+SSIS+AES+EE+ AW V S L PRKLLHKRKGIPHR+PL
Sbjct: 181 MSEMESSISLAESSEEMTAW-VCSALKPRKLLHKRKGIPHRAPL 223

[Close]

BLAST of Cp4.1LG01g18550 vs. NCBI nr
Match: gi|802596746|ref|XP_012072352.1| (PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas])

HSP 1 Score: 302.0 bits (772), Expect = 8.8e-79
Identity = 148/225 (65.78%), Postives = 179/225 (79.56%), Query Frame = 1


Query: 1   MAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCI 60
           M GCK Y++  K+DWLS+LL+SKFFGSCVHH+  RKNEKNVFCIDC I +CRHCL +H +
Sbjct: 1   MVGCKFYIEN-KSDWLSTLLKSKFFGSCVHHREFRKNEKNVFCIDCNIGLCRHCLKAHSL 60

Query: 61  HRRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HR+LQICKYVY  VVR+ D+Q HLDC  IQTYKINGEKAVHL+PRPQ KDSKPSTK KFG
Sbjct: 61  HRQLQICKYVYHDVVRLQDIQKHLDCSKIQTYKINGEKAVHLNPRPQPKDSKPSTKAKFG 120

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCIT-SKSDPNEISWKENHNVEPN 180
            +CEACGRY+QDLPNRFCSIACKVS V V+  +Q  + IT S  +   +SWKEN+N E  
Sbjct: 121 ASCEACGRYLQDLPNRFCSIACKVSTVSVKPKDQKPKLITFSIQEFPNLSWKENYNQERE 180

Query: 181 TS-EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPL 224
           +S EM+S++S+ + +EE + W + S L PRK LHKRKGIP R+PL
Sbjct: 181 SSGEMESTLSLTDMSEENQEWLI-SALKPRKQLHKRKGIPRRAPL 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g18550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD0_CUCSA	9.0e-115	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550220 PE=4 SV=1	[more]
W9QTI6_9ROSA	2.9e-81	67.57	Uncharacterized protein OS=Morus notabilis GN=L484_006762 PE=4 SV=1	[more]
M5XHZ9_PRUPE	1.6e-79	65.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011075mg PE=4 SV=1	[more]
A0A067KT65_JATCU	6.1e-79	65.78	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04796 PE=4 SV=1	[more]
B9HJI8_POPTR	5.7e-77	62.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13660g PE=4 SV=2	[more]

BLAST of Cp4.1LG01g18550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01818.1	4.4e-52	48.42	PLATZ transcription factor family protein	[more]
AT2G12646.1	2.3e-29	43.80	PLATZ transcription factor family protein	[more]
AT3G60670.1	4.4e-28	35.44	PLATZ transcription factor family protein	[more]
AT1G31040.1	8.3e-27	33.48	PLATZ transcription factor family protein	[more]
AT4G17900.1	7.7e-25	33.48	PLATZ transcription factor family protein	[more]

BLAST of Cp4.1LG01g18550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450143\|ref\|XP_004142823.1\|	1.3e-114	88.89	PREDICTED: uncharacterized protein LOC101210438 [Cucumis sativus]	[more]
gi\|659072774\|ref\|XP_008467074.1\|	1.3e-114	88.89	PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo]	[more]
gi\|703087559\|ref\|XP_010093304.1\|	4.2e-81	67.57	hypothetical protein L484_006762 [Morus notabilis]	[more]
gi\|596216967\|ref\|XP_007223932.1\|	2.3e-79	65.18	hypothetical protein PRUPE_ppa011075mg [Prunus persica]	[more]
gi\|802596746\|ref\|XP_012072352.1\|	8.8e-79	65.78	PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597
IPR000315	Znf_B-box

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18550.1	Cp4.1LG01g18550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 28..66 score: 8
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 68..144 score: 5.9
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 9..223 score: 1.3
None	No IPR available	PANTHER	PTHR31065:SF15	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 9..223 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g18550	Cucsa.012070	Cucumber (Gy14) v1	cgycpeB0523
Cp4.1LG01g18550	CmaCh04G021370	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g18550	CmoCh04G022300	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g18550	Cla005803	Watermelon (97103) v1	cpewmB440
Cp4.1LG01g18550	MELO3C005262	Melon (DHL92) v3.5.1	cpemeB353
Cp4.1LG01g18550	ClCG01G006660	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g18550	Lsi09G007020	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g18550	MELO3C005262.2	Melon (DHL92) v3.6.1	cpemedB412
Cp4.1LG01g18550	CsaV3_5G027910	Cucumber (Chinese Long) v3	cpecucB0547
Cp4.1LG01g18550	Bhi12G000839	Wax gourd	cpewgoB0491
Cp4.1LG01g18550	CsGy5G018590	Cucumber (Gy14) v2	cgybcpeB651
Cp4.1LG01g18550	Carg25248	Silver-seed gourd	carcpeB1228

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g18550	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g18550	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g18550	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g18550	Wild cucumber (PI 183967)	cpecpiB444
Cp4.1LG01g18550	Cucumber (Chinese Long) v2	cpecuB443
Cp4.1LG01g18550	Silver-seed gourd	carcpeB1158