Lsi09G006580 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G006580
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionB3 domain-containing protein
Locationchr09 : 7366816 .. 7367589 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACAGGGAAGACAATGGCTGAAGGCTTCAGAATGGGTTCTTATCTTCCAGATTTAAACCAAATTTATATACCTCGAAGAAGAAGGGGATCTTCCGGCGCCAGAAAGGAAGAACAAGAACAACCCAAGATTGAAACTGTCCATTCCCTGACTACGTCGGAGGTTGCGGCTATTCTAATAGAGTTTTCACAATCTGCTCCTAATACTAATACTAATACTGAACCAGAAAAAACTAACAACACCCACAAAAGAAAGAAGCCTCCGACGCCGTCGCCGACTAATACAACTAAGAAACAGAGGAAGAAGAAAGCGAAACAGAGCAAGTATCCGTCGATTCCTGAGATGCCGGCAGCGACGAGAGATCGGATTGTTGAGATGGGTGGGTATGAAATACGACTGGTGATTCAGAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGGCGTTTATCCCTGCCAGCAAAGAAACTGTTGTTTGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGTAAAGTGGAAAACAAAAACAAGAAGGGGATGAACGTGATGATTTTGGATGATGTTCTTGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAGATTGGAAGTGGAGATGTTTATTGTTTGATGACACAGTGGAATTCTTTTGTGGAAGAAAGAGGATTGAAAAGTGGAGAACATATTCAACTTTGGTGCTTTAGAAAAGATGATGAATTTGAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGTTAGCGCCGTGCTAG

mRNA sequence

ATGGTAACAGGGAAGACAATGGCTGAAGGCTTCAGAATGGGTTCTTATCTTCCAGATTTAAACCAAATTTATATACCTCGAAGAAGAAGGGGATCTTCCGGCGCCAGAAAGGAAGAACAAGAACAACCCAAGATTGAAACTGTCCATTCCCTGACTACGTCGGAGGTTGCGGCTATTCTAATAGAGTTTTCACAATCTGCTCCTAATACTAATACTAATACTGAACCAGAAAAAACTAACAACACCCACAAAAGAAAGAAGCCTCCGACGCCGTCGCCGACTAATACAACTAAGAAACAGAGGAAGAAGAAAGCGAAACAGAGCAAGTATCCGTCGATTCCTGAGATGCCGGCAGCGACGAGAGATCGGATTGTTGAGATGGGTGGGTATGAAATACGACTGGTGATTCAGAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGGCGTTTATCCCTGCCAGCAAAGAAACTGTTGTTTGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGTAAAGTGGAAAACAAAAACAAGAAGGGGATGAACGTGATGATTTTGGATGATGTTCTTGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAGATTGGAAGTGGAGATGTTTATTGTTTGATGACACAGTGGAATTCTTTTGTGGAAGAAAGAGGATTGAAAAGTGGAGAACATATTCAACTTTGGTGCTTTAGAAAAGATGATGAATTTGAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGTTAGCGCCGTGCTAG

Coding sequence (CDS)

ATGGTAACAGGGAAGACAATGGCTGAAGGCTTCAGAATGGGTTCTTATCTTCCAGATTTAAACCAAATTTATATACCTCGAAGAAGAAGGGGATCTTCCGGCGCCAGAAAGGAAGAACAAGAACAACCCAAGATTGAAACTGTCCATTCCCTGACTACGTCGGAGGTTGCGGCTATTCTAATAGAGTTTTCACAATCTGCTCCTAATACTAATACTAATACTGAACCAGAAAAAACTAACAACACCCACAAAAGAAAGAAGCCTCCGACGCCGTCGCCGACTAATACAACTAAGAAACAGAGGAAGAAGAAAGCGAAACAGAGCAAGTATCCGTCGATTCCTGAGATGCCGGCAGCGACGAGAGATCGGATTGTTGAGATGGGTGGGTATGAAATACGACTGGTGATTCAGAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGGCGTTTATCCCTGCCAGCAAAGAAACTGTTGTTTGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGTAAAGTGGAAAACAAAAACAAGAAGGGGATGAACGTGATGATTTTGGATGATGTTCTTGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAGATTGGAAGTGGAGATGTTTATTGTTTGATGACACAGTGGAATTCTTTTGTGGAAGAAAGAGGATTGAAAAGTGGAGAACATATTCAACTTTGGTGCTTTAGAAAAGATGATGAATTTGAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGTTAGCGCCGTGCTAG

Protein sequence

MVTGKTMAEGFRMGSYLPDLNQIYIPRRRRGSSGARKEEQEQPKIETVHSLTTSEVAAILIEFSQSAPNTNTNTEPEKTNNTHKRKKPPTPSPTNTTKKQRKKKAKQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMVKLAPC
Homology
[Close]
BLAST of Lsi09G006580 vs. Swiss-Prot
Match: Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1 

Query: 129 GYEIRLVIQKQ-LQDTDLNKNHGRLSLPAKKL-LFDFATEEERKLLSKVENK-NKKGMNV 188
           GY+ +L+I+++ L  TDL KN G LS+   KL   DF TE+E + L +   K  + G+ V
Sbjct: 73  GYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKV 132

Query: 189 MILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEAS 248
            ++D   ++ +V LKKW   +   Y L   WN+ ++++  K  + I++W FR      + 
Sbjct: 133 FLVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDG----SG 192

Query: 249 RLCFAMVKLAPC 258
           +LCFA+     C
Sbjct: 193 KLCFALSSPTRC 200

[Close]
BLAST of Lsi09G006580 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 1 

Query: 101 RKKKAKQSKY--PSIPEMPAATRDRIVEMGGY-EIRLVIQKQLQDTDLNKNHGRLSLPAK 160
           R+KK    ++  P  P+ P      +  M G  + +L+I+K L   D++    RLS+P  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 161 KLL-FDFATEEERKLL--SKVENKNKKGMNVMILDDVLEERMVCLKKW--KIGSGDVY-- 220
            ++  DF T +E +L+   ++ N+   G+   ++D   ++  +  K+W     SG  Y  
Sbjct: 206 TVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWS 265

Query: 221 -CLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMV 253
             L  +W++ VE  GLK G+ I LW FR +D      LCFA+V
Sbjct: 266 FVLRGEWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of Lsi09G006580 vs. Swiss-Prot
Match: Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 1 

Query: 64  SQSAPNTNTNTEPEKTNNTHKRKKPPTPSPTNTTKKQRKKKA------KQSKYPSIPEMP 123
           + +  N N   EP  ++   +R K   P   N  K+  KK+       ++    + PE  
Sbjct: 16  TSTTQNPNRGLEPSPSSYVTRRSKEKRP--INVEKRSHKKRKIICPLEEEPIQTTPPEWL 75

Query: 124 AATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLF-DFATEEERKLLSKVE 183
                R  E  GY  +L+  +QL  TDL K   RLS+P K++   DF TE+E +++ +  
Sbjct: 76  LNVMRR--EENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENA 135

Query: 184 NK-NKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVE--ERGLKSGEHIQL 243
            K    G+ V  +D  L + ++ L+KWK+    +Y  +  W + ++  +   K  +   L
Sbjct: 136 MKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPL 195

Query: 244 WCFRKDDEFEASRLCFAM 252
           W FR        +LCFA+
Sbjct: 196 WSFRSG----TGKLCFAL 205

[Close]
BLAST of Lsi09G006580 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 166/274 (60.58%), Postives = 192/274 (70.07%), Query Frame = 1 

Query: 1   MVTGKTMAEGFRMGSYLPDLNQIYIPRRRRG-SSGARKEEQEQPKIETVHSLTTSEVAAI 60
           MV   ++  G R+   LPDLN +Y+PR+RRG SSG  K+EQ     ET   L+ +E A+I
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSM--TETELPLSMAEAASI 60

Query: 61  LIEFSQSAPNTNTNTEPEKTNNTHKRKKPPTPSPTNT----------------TKKQRKK 120
           LI+ + S P    +  P+K N T KRK PPT +  +T                TKKQRK 
Sbjct: 61  LIQLANSVP----DVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKM 120

Query: 121 KAKQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDF 180
              QS+ PS   MP A RDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDF
Sbjct: 121 NVDQSERPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDF 180

Query: 181 ATEEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEER 240
           ATEEE KLLS+ ENKNK G+NVMILDDVLEERM+CLKKWKIGSG VYCLMT+WN  VEER
Sbjct: 181 ATEEESKLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEER 240

Query: 241 GLKSGEHIQLWCFRKDDEFEASRLCFAMVKLAPC 258
           GLKSGE IQ+W FRKDDE EA RLC A+VKLA C
Sbjct: 241 GLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Lsi09G006580 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.5e-73
Identity = 159/247 (64.37%), Postives = 183/247 (74.09%), Query Frame = 1 

Query: 10  GFRMGSYLPDLNQIYIPRRRRGSS-GARKEEQEQPKIETVHSLTTSEVAAILIEFSQSAP 69
           G R+   LPDLN +Y+PR+RRGSS G  K+EQ     ET   L+ +E A+ILI+ + S P
Sbjct: 8   GLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMT--ETELPLSMAEAASILIQLANSVP 67

Query: 70  NTNTNTEPEKTNNTHKRKKPPTPSPTNT--TKKQRKKKAKQSKYPSIPEMPAATRDRIVE 129
           +       +K N T KRK PPT +  +T  TKKQRK    QS+ PS   MP A RDRI+E
Sbjct: 68  DVPL----QKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRILE 127

Query: 130 MGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKVENKNKKGMNVM 189
           MGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLS+ ENKNK G+NVM
Sbjct: 128 MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 187

Query: 190 ILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASR 249
            LDDVLEERM+CLKKWKIGSG VYCLMT+WN  VEERGLKSGE IQ+W FRKDDE EA R
Sbjct: 188 TLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHR 245

Query: 250 LCFAMVK 254
           LCFA+ K
Sbjct: 248 LCFALEK 245

[Close]
BLAST of Lsi09G006580 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.9e-72
Identity = 158/268 (58.96%), Postives = 185/268 (69.03%), Query Frame = 1 

Query: 1   MVTGKTMAEGFRMGSYLPDLNQIYIPRRRRGSSGARKEEQEQPKIETVHSLTTSEVAAIL 60
           M    T+  G R+      LN IYIPR+RRGSS    +EQ Q   ET   L+  E A+IL
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQ-QYITETELPLSMVEAASIL 60

Query: 61  IEFSQSAP-------------NTNTNTEPEKTNNTHKRKKPPTPSPTNT--TKKQRKKKA 120
           IE + S P             N+  + E +K N THKRK PP P+  +T  TKKQRKK  
Sbjct: 61  IELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNV 120

Query: 121 KQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFAT 180
            + ++   P MP   RDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFAT
Sbjct: 121 NKREH---PPMPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFAT 180

Query: 181 EEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGL 240
           EEE KLLS+ ENKNKKG+NVMILDD LEER++CLKKWKIGSG+VYCLMTQWN  VE+RG 
Sbjct: 181 EEESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGF 240

Query: 241 KSGEHIQLWCFRKDDEFEASRLCFAMVK 254
           KSGE IQ+W FRKDDE+EA RLCFA+ K
Sbjct: 241 KSGEEIQVWSFRKDDEYEAHRLCFALEK 264

[Close]
BLAST of Lsi09G006580 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.8e-54
Identity = 105/133 (78.95%), Postives = 116/133 (87.22%), Query Frame = 1 

Query: 125 VEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKVENKNKKGMN 184
           +EM GYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLS+ ENKNK G+N
Sbjct: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 62

Query: 185 VMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEA 244
           VM+LDDVLEERM+CLKKWKIGSG+VYCLMT+WN  VEERGLKSGE IQ+W FRKDDE EA
Sbjct: 63  VMLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 122

Query: 245 SRLCFAMVKLAPC 258
            RLC A+VKLA C
Sbjct: 123 HRLCLALVKLATC 135

[Close]
BLAST of Lsi09G006580 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 111/236 (47.03%), Postives = 149/236 (63.14%), Query Frame = 1 

Query: 23  IYIPRRRRGSSGARKEEQEQPKIETVHSLTTSEVAAILIEFSQSAPNTNTNTEPEKTNNT 82
           +++PRR+R  S   K+E +   I  V      E A ILI  +    N       +K + T
Sbjct: 21  VHVPRRKRSGSVESKKEDDGASISMV------EAAKILIAMA----NDGFCKRKKKESPT 80

Query: 83  HKR-KKPPTPSPTNTTKKQRKKKAKQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQ 142
            K+ KK PT     T+   ++KK       S PEMPA+ RDR+V  GGYEI+LVIQKQL+
Sbjct: 81  VKQSKKSPTAKKRKTSPTAKQKKKSMELEESFPEMPASMRDRVVGKGGYEIQLVIQKQLE 140

Query: 143 DTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKV---ENKNKKGMNVMILDDVLEERMVC 202
           ++D+++NHGRL LPAKK+  +F  EEER +L +    + KNKKG+ V ++DD L E  +C
Sbjct: 141 ESDVSRNHGRLCLPAKKVKTEFVREEERNILEEENDGKKKNKKGLEVGVMDDSLRESSMC 200

Query: 203 LKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMVKL 255
           LKKWKIGSG  YCLM  WN FVEE GL+SG++IQLW FR +    + +LCFA+VKL
Sbjct: 201 LKKWKIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFRNN---ISDKLCFAIVKL 243

[Close]
BLAST of Lsi09G006580 vs. TAIR10
Match: AT2G31420.1 (AT2G31420.1 Domain of unknown function (DUF313) )

HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1 

Query: 129 GYEIRLVIQKQ-LQDTDLNKNHGRLSLPAKKL-LFDFATEEERKLLSKVENK-NKKGMNV 188
           GY+ +L+I+++ L  TDL KN G LS+   KL   DF TE+E + L +   K  + G+ V
Sbjct: 73  GYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKV 132

Query: 189 MILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEAS 248
            ++D   ++ +V LKKW   +   Y L   WN+ ++++  K  + I++W FR      + 
Sbjct: 133 FLVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDG----SG 192

Query: 249 RLCFAMVKLAPC 258
           +LCFA+     C
Sbjct: 193 KLCFALSSPTRC 200

[Close]
BLAST of Lsi09G006580 vs. TAIR10
Match: AT1G05920.1 (AT1G05920.1 Domain of unknown function (DUF313) )

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 1 

Query: 101 RKKKAKQSKY--PSIPEMPAATRDRIVEMGGY-EIRLVIQKQLQDTDLNKNHGRLSLPAK 160
           R+KK    ++  P  P+ P      +  M G  + +L+I+K L   D++    RLS+P  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 161 KLL-FDFATEEERKLL--SKVENKNKKGMNVMILDDVLEERMVCLKKW--KIGSGDVY-- 220
            ++  DF T +E +L+   ++ N+   G+   ++D   ++  +  K+W     SG  Y  
Sbjct: 206 TVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWS 265

Query: 221 -CLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMV 253
             L  +W++ VE  GLK G+ I LW FR +D      LCFA+V
Sbjct: 266 FVLRGEWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of Lsi09G006580 vs. TAIR10
Match: AT2G27410.1 (AT2G27410.1 Domain of unknown function (DUF313) )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 1 

Query: 64  SQSAPNTNTNTEPEKTNNTHKRKKPPTPSPTNTTKKQRKKKA------KQSKYPSIPEMP 123
           + +  N N   EP  ++   +R K   P   N  K+  KK+       ++    + PE  
Sbjct: 16  TSTTQNPNRGLEPSPSSYVTRRSKEKRP--INVEKRSHKKRKIICPLEEEPIQTTPPEWL 75

Query: 124 AATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLF-DFATEEERKLLSKVE 183
                R  E  GY  +L+  +QL  TDL K   RLS+P K++   DF TE+E +++ +  
Sbjct: 76  LNVMRR--EENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENA 135

Query: 184 NK-NKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVE--ERGLKSGEHIQL 243
            K    G+ V  +D  L + ++ L+KWK+    +Y  +  W + ++  +   K  +   L
Sbjct: 136 MKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPL 195

Query: 244 WCFRKDDEFEASRLCFAM 252
           W FR        +LCFA+
Sbjct: 196 WSFRSG----TGKLCFAL 205

[Close]
BLAST of Lsi09G006580 vs. TAIR10
Match: AT2G24670.1 (AT2G24670.1 Domain of unknown function (DUF313) )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 55/216 (25.46%), Postives = 105/216 (48.61%), Query Frame = 1 

Query: 60  LIEFSQSAPNTNTNTEPEKTNNTHKRKKPPTPS----------PTNTTKKQRK-KKAKQS 119
           ++  ++S+  T  +T  E  ++ H      +P+          P +   +QRK KKAK+S
Sbjct: 38  ILRRNKSSTITTPSTVMESKSHIHDHSLRESPTRRSRNRHDLPPMSPPMEQRKSKKAKRS 97

Query: 120 KYPSIPEMPAATRDRIVEM----GGYEI----RLVIQKQLQDTDLNKNHGRLSLPAKKLL 179
              S  +    T   ++ +     G ++    + +I K+L  TD++ +  RLS+P  +++
Sbjct: 98  TDASSSKTREPTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDPHQSRLSIPVSQIV 157

Query: 180 -FDFATEEERKLLSKVENK-NKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNS 239
             +F   EE++ + +  N+  K+G++ +++D  L E  V L+   +    +Y L+  WN 
Sbjct: 158 ELEFLNHEEKRAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMRGILLYNLVAGWNQ 217

Query: 240 FVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMVKL 255
            V +  L+   +I+LW F  DD      L FA+V L
Sbjct: 218 VVTDCLLEENTNIRLWSFHADD-----TLYFALVPL 248

[Close]
BLAST of Lsi09G006580 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 4.0e-75
Identity = 166/274 (60.58%), Postives = 192/274 (70.07%), Query Frame = 1 

Query: 1   MVTGKTMAEGFRMGSYLPDLNQIYIPRRRRG-SSGARKEEQEQPKIETVHSLTTSEVAAI 60
           MV   ++  G R+   LPDLN +Y+PR+RRG SSG  K+EQ     ET   L+ +E A+I
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSM--TETELPLSMAEAASI 60

Query: 61  LIEFSQSAPNTNTNTEPEKTNNTHKRKKPPTPSPTNT----------------TKKQRKK 120
           LI+ + S P    +  P+K N T KRK PPT +  +T                TKKQRK 
Sbjct: 61  LIQLANSVP----DVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKM 120

Query: 121 KAKQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDF 180
              QS+ PS   MP A RDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDF
Sbjct: 121 NVDQSERPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDF 180

Query: 181 ATEEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEER 240
           ATEEE KLLS+ ENKNK G+NVMILDDVLEERM+CLKKWKIGSG VYCLMT+WN  VEER
Sbjct: 181 ATEEESKLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEER 240

Query: 241 GLKSGEHIQLWCFRKDDEFEASRLCFAMVKLAPC 258
           GLKSGE IQ+W FRKDDE EA RLC A+VKLA C
Sbjct: 241 GLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Lsi09G006580 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 8.8e-75
Identity = 158/249 (63.45%), Postives = 188/249 (75.50%), Query Frame = 1 

Query: 9   EGFRMGSYLPDLNQIYIPRRRRGSSGARKEEQEQPKIETVHSLTTSEVAAILIEFSQSAP 68
           EGFRM  +    NQ Y+P+RRR     R E +EQ   +T   ++ SE A +LIE + S P
Sbjct: 8   EGFRMNVH--SFNQFYVPQRRRSF---RVEIKEQSNPQTHLPISMSEAADVLIEMANSVP 67

Query: 69  NTNTNTEPEKTNNTHKRKKPPTPSPTNTTKKQRKKKAKQSKYPSIPEMPAATRDRIVEMG 128
           N     EP++ N THKRK PP  + T   K++RKKK +QS+YPSIPEMP   RDRI EMG
Sbjct: 68  NV----EPQQINKTHKRKNPPRTN-TAIKKQRRKKKVEQSEYPSIPEMPTTMRDRIEEMG 127

Query: 129 GYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKVENKNKKGMNVMIL 188
           GYEI LVIQKQL DTDLNKN GRLS+P KKL FDF TEEER LLS+ ENKNKKG+NVMI+
Sbjct: 128 GYEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKGINVMIM 187

Query: 189 DDVLEE-RMVCLKKWKIGS--GDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEAS 248
           ++++E+ R +CLKKWKIGS  GDVYCLMTQWN+FVEE GLKSG+HIQLWCFRKD EFE  
Sbjct: 188 NNMVEDIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRKDYEFEPP 246

Query: 249 RLCFAMVKL 255
           RLCFA+V+L
Sbjct: 248 RLCFAVVRL 246

[Close]
BLAST of Lsi09G006580 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72
Identity = 159/247 (64.37%), Postives = 183/247 (74.09%), Query Frame = 1 

Query: 10  GFRMGSYLPDLNQIYIPRRRRGSS-GARKEEQEQPKIETVHSLTTSEVAAILIEFSQSAP 69
           G R+   LPDLN +Y+PR+RRGSS G  K+EQ     ET   L+ +E A+ILI+ + S P
Sbjct: 8   GLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMT--ETELPLSMAEAASILIQLANSVP 67

Query: 70  NTNTNTEPEKTNNTHKRKKPPTPSPTNT--TKKQRKKKAKQSKYPSIPEMPAATRDRIVE 129
           +       +K N T KRK PPT +  +T  TKKQRK    QS+ PS   MP A RDRI+E
Sbjct: 68  DVPL----QKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRILE 127

Query: 130 MGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSKVENKNKKGMNVM 189
           MGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLS+ ENKNK G+NVM
Sbjct: 128 MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 187

Query: 190 ILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGLKSGEHIQLWCFRKDDEFEASR 249
            LDDVLEERM+CLKKWKIGSG VYCLMT+WN  VEERGLKSGE IQ+W FRKDDE EA R
Sbjct: 188 TLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHR 245

Query: 250 LCFAMVK 254
           LCFA+ K
Sbjct: 248 LCFALEK 245

[Close]
BLAST of Lsi09G006580 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 7.0e-72
Identity = 158/268 (58.96%), Postives = 185/268 (69.03%), Query Frame = 1 

Query: 1   MVTGKTMAEGFRMGSYLPDLNQIYIPRRRRGSSGARKEEQEQPKIETVHSLTTSEVAAIL 60
           M    T+  G R+      LN IYIPR+RRGSS    +EQ Q   ET   L+  E A+IL
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQ-QYITETELPLSMVEAASIL 60

Query: 61  IEFSQSAP-------------NTNTNTEPEKTNNTHKRKKPPTPSPTNT--TKKQRKKKA 120
           IE + S P             N+  + E +K N THKRK PP P+  +T  TKKQRKK  
Sbjct: 61  IELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNV 120

Query: 121 KQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFAT 180
            + ++   P MP   RDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFAT
Sbjct: 121 NKREH---PPMPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFAT 180

Query: 181 EEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLMTQWNSFVEERGL 240
           EEE KLLS+ ENKNKKG+NVMILDD LEER++CLKKWKIGSG+VYCLMTQWN  VE+RG 
Sbjct: 181 EEESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGF 240

Query: 241 KSGEHIQLWCFRKDDEFEASRLCFAMVK 254
           KSGE IQ+W FRKDDE+EA RLCFA+ K
Sbjct: 241 KSGEEIQVWSFRKDDEYEAHRLCFALEK 264

[Close]
BLAST of Lsi09G006580 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 7.0e-64
Identity = 125/164 (76.22%), Postives = 141/164 (85.98%), Query Frame = 1 

Query: 94  TNTTKKQRKKKAKQSKYPSIPEMPAATRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLS 153
           T+ TKKQRKK  KQ ++PS   MP A RDRI+EMGGYEIRLVIQKQL DTDLNKNHGRLS
Sbjct: 27  TSRTKKQRKKYVKQIEHPS---MPVAMRDRILEMGGYEIRLVIQKQLTDTDLNKNHGRLS 86

Query: 154 LPAKKLLFDFATEEERKLLSKVENKNKKGMNVMILDDVLEERMVCLKKWKIGSGDVYCLM 213
           +  K+L FDFATEEE KLLS+ ENKNK+G+NVM+LDDVLEERM+CLKKWKIGSG+VYCLM
Sbjct: 87  MNTKQLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKIGSGEVYCLM 146

Query: 214 TQWNSFVEERGLKSGEHIQLWCFRKDDEFEASRLCFAMVKLAPC 258
           T+WN  VEERG K GE IQ+W FRKDDE+EA RLCFA+VKLA C
Sbjct: 147 TRWNLMVEERGFKGGEEIQVWSFRKDDEYEAHRLCFALVKLATC 187

The following BLAST results are available for this feature:
BLAST of Lsi09G006580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y2142_ARATH1.4e-1133.33B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3... [more]
Y1592_ARATH3.4e-1030.06B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y2741_ARATH2.7e-0727.27Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g2... [more]
BLAST of Lsi09G006580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP87_CUCSA2.8e-7560.58Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA7.5e-7364.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA4.9e-7258.96Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA7.8e-5478.95Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
A0A0A0LRL4_CUCSA1.5e-4447.03Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
BLAST of Lsi09G006580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31420.17.8e-1333.33 Domain of unknown function (DUF313) [more]
AT1G05920.11.9e-1130.06 Domain of unknown function (DUF313) [more]
AT2G27410.11.5e-0827.27 Domain of unknown function (DUF313) [more]
AT2G24670.11.1e-0625.46 Domain of unknown function (DUF313) [more]
BLAST of Lsi09G006580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703844|ref|XP_011655441.1|4.0e-7560.58PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|659072764|ref|XP_008467039.1|8.8e-7563.45PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo][more]
gi|700196319|gb|KGN51496.1|1.1e-7264.37hypothetical protein Csa_5G570410 [Cucumis sativus][more]
gi|700196320|gb|KGN51497.1|7.0e-7258.96hypothetical protein Csa_5G570420 [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|7.0e-6476.22PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR005508DUF313
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G006580.1Lsi09G006580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 121..221
score: 2.6
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 134..240
score: 9.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 135..248
score: 5.69
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 97..256
score: 1.0
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 97..256
score: 1.0