Cla003924 (gene) Watermelon (97103) v1

NameCla003924
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionB3 domain-containing protein At2g31420 (AHRD V1 *-*- Y2142_ARATH); contains Interpro domain(s) IPR005508 Protein of unknown function DUF313
LocationChr1 : 6404802 .. 6405515 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAAGAGACAATCGTTAAAGGCTTCGAAATGGGTCTTGATATTCCAGATTTAAGCCAAATTTACATACCTCGAAGAAGAAGGGGATCTGGTGCTAGAAAGAAAGAACATCCCCTATCCATGTCGGAGGTTGCAGATATTCTAATTCAGTTTTCACAATCTTTTCCTGATACTGAGCCAGAAAAAATTAACAAAACCCACAAAAGAAATAGGCCTTCGACGACTATGACTAAGAAACATAAGAAGAAGGCAAAACAAAGCAAGTATCTGTCGATTCCTGACATGCCGGTGGCGATGAGGGATCGGATTGTAGAGATGGGTGGGTATGGAATTAGACTAGTGATTCAAAAACAACTCCAAGATACAGATTTAAACAAGAACCATGGCCGTTTATCCCTGCCAAGACAGAAACTGCTATTCGATTTTGCATCAGAGGAGGAGAGAAAGTTGCTAAGCAAACAAGAAAACAAGAACAAGAAAGGGATGAATGTAGTGATAATGGATGATGTTTTTGAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTATTGCTTGATGACACATTGGAATTCATTTGTGGAAGAAACTAGATTGAAAAGTGGACAATACATTCAAGTTTGGTGCTTTAGAAAAGATGATGAATTTCAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGCTACCACCTTGCTAA

mRNA sequence

ATGGTAAAAGAGACAATCGTTAAAGGCTTCGAAATGGGTCTTGATATTCCAGATTTAAGCCAAATTTACATACCTCGAAGAAGAAGGGGATCTGGTGCTAGAAAGAAAGAACATCCCCTATCCATGTCGGAGGTTGCAGATATTCTAATTCAGTTTTCACAATCTTTTCCTGATACTGAGCCAGAAAAAATTAACAAAACCCACAAAAGAAATAGGCCTTCGACGACTATGACTAAGAAACATAAGAAGAAGGCAAAACAAAGCAAGTATCTGTCGATTCCTGACATGCCGGTGGCGATGAGGGATCGGATTGTAGAGATGGGTGGGTATGGAATTAGACTAGTGATTCAAAAACAACTCCAAGATACAGATTTAAACAAGAACCATGGCCGTTTATCCCTGCCAAGACAGAAACTGCTATTCGATTTTGCATCAGAGGAGGAGAGAAAGTTGCTAAGCAAACAAGAAAACAAGAACAAGAAAGGGATGAATGTAGTGATAATGGATGATGTTTTTGAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTATTGCTTGATGACACATTGGAATTCATTTGTGGAAGAAACTAGATTGAAAAGTGGACAATACATTCAAGTTTGGTGCTTTAGAAAAGATGATGAATTTCAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGCTACCACCTTGCTAA

Coding sequence (CDS)

ATGGTAAAAGAGACAATCGTTAAAGGCTTCGAAATGGGTCTTGATATTCCAGATTTAAGCCAAATTTACATACCTCGAAGAAGAAGGGGATCTGGTGCTAGAAAGAAAGAACATCCCCTATCCATGTCGGAGGTTGCAGATATTCTAATTCAGTTTTCACAATCTTTTCCTGATACTGAGCCAGAAAAAATTAACAAAACCCACAAAAGAAATAGGCCTTCGACGACTATGACTAAGAAACATAAGAAGAAGGCAAAACAAAGCAAGTATCTGTCGATTCCTGACATGCCGGTGGCGATGAGGGATCGGATTGTAGAGATGGGTGGGTATGGAATTAGACTAGTGATTCAAAAACAACTCCAAGATACAGATTTAAACAAGAACCATGGCCGTTTATCCCTGCCAAGACAGAAACTGCTATTCGATTTTGCATCAGAGGAGGAGAGAAAGTTGCTAAGCAAACAAGAAAACAAGAACAAGAAAGGGATGAATGTAGTGATAATGGATGATGTTTTTGAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTGTATTGCTTGATGACACATTGGAATTCATTTGTGGAAGAAACTAGATTGAAAAGTGGACAATACATTCAAGTTTGGTGCTTTAGAAAAGATGATGAATTTCAAGCTTCTCGTCTTTGCTTCGCTATGGTTAAGCTACCACCTTGCTAA

Protein sequence

MVKETIVKGFEMGLDIPDLSQIYIPRRRRGSGARKKEHPLSMSEVADILIQFSQSFPDTEPEKINKTHKRNRPSTTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVVIMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASRLCFAMVKLPPC
BLAST of Cla003924 vs. Swiss-Prot
Match: Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 7.0e-10
Identity = 46/178 (25.84%), Postives = 81/178 (45.51%), Query Frame = 1

Query: 64  INKTHKRNRPSTTMTKKHKKKA------KQSKYLSIPDMPVAMRDRIVEMGGYGIRLVIQ 123
           + +  K  RP     + HKK+       ++    + P+  + +  R  E  GY  +L+  
Sbjct: 34  VTRRSKEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRR--EENGYNPKLIST 93

Query: 124 KQLQDTDLNKNHGRLSLP-RQKLLFDFASEEERKLLSKQENK-NKKGMNVVIMDDVFEER 183
           +QL  TDL K   RLS+P +Q    DF +E+E +++ +   K    G+ V  +D    + 
Sbjct: 94  RQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKH 153

Query: 184 MICLKKWKIGSGDVYCLMTHWNSFVE--ETRLKSGQYIQVWCFRKDDEFQASRLCFAM 232
           ++ L+KWK+    +Y  +  W + ++  +T  K      +W FR        +LCFA+
Sbjct: 154 VLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG----TGKLCFAL 205

BLAST of Cla003924 vs. Swiss-Prot
Match: Y5849_ARATH (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana GN=At5g38490 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-09
Identity = 51/182 (28.02%), Postives = 86/182 (47.25%), Query Frame = 1

Query: 67  THKRNRPSTTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVEMGGY------GIRLVIQKQL 126
           T K NR    + ++   K K+ K   +P +   M + I ++  Y        RL+ ++ L
Sbjct: 185 TGKTNRKRRAVEQRKSGKVKKVKVSPLPRLCTEMPEWIFQVMRYMNADAETPRLIFERTL 244

Query: 127 QDTDLNKNHGRLSLPRQKLL-FDFASEEERKLLSKQENKNKK-----GMNVVIMDDVFEE 186
             +D+N N  RL +P QKL+  DF +  E + + K E+ +++     G+  V+++  F++
Sbjct: 245 FKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTVLVNQRFQK 304

Query: 187 RMICLKKWKI----GSGDV-YCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASRLCF 232
             +  K W +    G G + Y L   WN  V+ + LK G  I +W FR         LCF
Sbjct: 305 WGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFR-----CRGVLCF 361

BLAST of Cla003924 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-08
Identity = 49/157 (31.21%), Postives = 72/157 (45.86%), Query Frame = 1

Query: 94  PDMPVAMRDRIVEMGGYGI-RLVIQKQLQDTDLNKNHGRLSLPRQKLL-FDFASEEERKL 153
           P  P  +   +  M G G  +L+I+K L   D++    RLS+P   ++  DF + +E +L
Sbjct: 161 PQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRL 220

Query: 154 LSKQENKNKKGMNVVIMDDVFEERMICLKKWKIG---------SGDVY---CLMTHWNSF 213
           + + E  N+  M V     + ++R    KKW +G         SG  Y    L   W++ 
Sbjct: 221 IDEDEITNEGNMGVAAF--LVDQR---TKKWNMGFKQWFMTTDSGSSYWSFVLRGEWSNV 280

Query: 214 VEETRLKSGQYIQVWCFRKDDEFQASRLCFAMVKLPP 237
           VE   LK G  I +W FR +D      LCFA+V  PP
Sbjct: 281 VETNGLKEGDKISLWSFRSND-----ILCFALV--PP 305

BLAST of Cla003924 vs. Swiss-Prot
Match: Y2467_ARATH (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 34/122 (27.87%), Postives = 65/122 (53.28%), Query Frame = 1

Query: 115 VIQKQLQDTDLNKNHGRLSLPRQKLL-FDFASEEERKLLSKQENK-NKKGMNVVIMDDVF 174
           +I K+L  TD++ +  RLS+P  +++  +F + EE++ + +  N+  K+G++ +++D   
Sbjct: 132 IIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEKRAIEEDANRVRKEGVDAILVDSHL 191

Query: 175 EERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASRLCFAMV 234
            E  + L+   +    +Y L+  WN  V +  L+    I++W F  DD      L FA+V
Sbjct: 192 REFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADD-----TLYFALV 248

BLAST of Cla003924 vs. Swiss-Prot
Match: Y1203_ARATH (B3 domain-containing protein At1g32030 OS=Arabidopsis thaliana GN=At1g32030 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.5e-07
Identity = 54/211 (25.59%), Postives = 96/211 (45.50%), Query Frame = 1

Query: 32  GARKKEHPLSMSEVADILIQFSQSFPDTEPEKINKTHKRNRPSTTMTKKHKKKAKQSKYL 91
           G  +++ P + S  + +L +++    +  P   ++T  + + S +  KK K      K  
Sbjct: 127 GDYERKTPQNASSSSTLLAEYNTEMANP-PNPNSETSLKRKHSDSEPKKAKTPYSW-KGR 186

Query: 92  SIPDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLL-FDFASEEERK 151
             P+  V M   +   G  G RL+ +K L +TD+     RL +P   L+  DF +  E +
Sbjct: 187 EAPEWLVKMMGTM--QGSEGPRLIYEKTLTETDVKPVQSRLLMPFNTLIRNDFLTPVELR 246

Query: 152 LLSKQENKNKKGMNVVIMDDVFEERMICLKKWKI----GSGDV-YCLMTHWNSFVEETRL 211
           +L + E+ +  G+   ++D    +  + LKK ++    G G + Y ++  WN  VE   L
Sbjct: 247 ILLELED-DTDGVGATLVDPWEVKWGVILKKREMKKYSGKGSLNYAIICGWNDIVEANVL 306

Query: 212 KSGQYIQVWCFRKDDEFQASRLCFAMVKLPP 237
           +    I +W FR+    +   L FA+V  PP
Sbjct: 307 EKDDDISIWSFRRG---RNGILSFALVLPPP 329

BLAST of Cla003924 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.7e-76
Identity = 158/265 (59.62%), Postives = 189/265 (71.32%), Query Frame = 1

Query: 1   MVKETIVK-GFEMGLDIPDLSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILI 60
           MV ET V+ G  + L +PDL+ +Y+PR+RRGS  G  KKE        PLSM+E A ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  QFSQSFPDTEPEKINKTHKRNRP------STTMTKKHKKK-------AKQSKYLSI---- 120
           Q + S PD  P+KINKT KR  P      ST+ TK+ +KK        K+ + +++    
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 -PDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLL 180
            P MPVAMRDRI+EMGGY I LVIQKQL DTDLNKNHGRLS+  ++L FDFA+EEE KLL
Sbjct: 121 RPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLL 180

Query: 181 SKQENKNKKGMNVVIMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQ 238
           S+QENKNK G+NV+I+DDV EERM+CLKKWKIGSG VYCLMT WN  VEE  LKSG+ IQ
Sbjct: 181 SEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQ 240

BLAST of Cla003924 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-72
Identity = 153/247 (61.94%), Postives = 179/247 (72.47%), Query Frame = 1

Query: 4   ETIVK-GFEMGLDIPDLSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILIQFS 63
           ET V+ G  + L +PDL+ +Y+PR+RRGS  G  KKE        PLSM+E A ILIQ +
Sbjct: 2   ETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLA 61

Query: 64  QSFPDTEPEKINKTHKRNRP------STTMTKKHKK-KAKQSKYLSIPDMPVAMRDRIVE 123
            S PD   +KINKT KR  P      ST+ TKK +K    QS+    P MPVAMRDRI+E
Sbjct: 62  NSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSER---PSMPVAMRDRILE 121

Query: 124 MGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVV 183
           MGGY I LVIQKQL DTDLNKNHGRLS+  ++L FDFA+EEE KLLS+QENKNK G+NV+
Sbjct: 122 MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 181

Query: 184 IMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASR 234
            +DDV EERM+CLKKWKIGSG VYCLMT WN  VEE  LKSG+ IQVW FRKDDE +A R
Sbjct: 182 TLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHR 241

BLAST of Cla003924 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.3e-67
Identity = 142/247 (57.49%), Postives = 170/247 (68.83%), Query Frame = 1

Query: 19  LSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILIQFSQSFP------------ 78
           L+ IYIPR+RRGS  GA K++        PLSM E A ILI+ + S P            
Sbjct: 20  LNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILIELANSVPVPDVQRQKFNKT 79

Query: 79  -----DTEPEKINKTHKRNRP------STTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVE 138
                D E +K+NKTHKR  P      ST+ TKK +KK    +    P MPV MRDRI+E
Sbjct: 80  ANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVNKR--EHPPMPVTMRDRILE 139

Query: 139 MGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVV 198
           MGGY IRLVIQK+L DTDLNKNHGR S+  + L FDFA+EEE KLLS+QENKNKKG+NV+
Sbjct: 140 MGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKGINVM 199

Query: 199 IMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASR 234
           I+DD  EER++CLKKWKIGSG+VYCLMT WN  VE+   KSG+ IQVW FRKDDE++A R
Sbjct: 200 ILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRKDDEYEAHR 259

BLAST of Cla003924 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-48
Identity = 96/133 (72.18%), Postives = 111/133 (83.46%), Query Frame = 1

Query: 105 VEMGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMN 164
           +EM GY I LVIQKQL DTDLNKNHGRLS+  ++L FDFA+EEE KLLS+QENKNK G+N
Sbjct: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 62

Query: 165 VVIMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQA 224
           V+++DDV EERM+CLKKWKIGSG+VYCLMT WN  VEE  LKSG+ IQVW FRKDDE +A
Sbjct: 63  VMLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 122

Query: 225 SRLCFAMVKLPPC 238
            RLC A+VKL  C
Sbjct: 123 HRLCLALVKLATC 135

BLAST of Cla003924 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 107/227 (47.14%), Postives = 149/227 (65.64%), Query Frame = 1

Query: 22  IYIPRRRR-GSGARKKEHP---LSMSEVADILIQFSQSFPDTEPEKINKTHKRNRPS--- 81
           +++PRR+R GS   KKE     +SM E A ILI  +        +K + T K+++ S   
Sbjct: 21  VHVPRRKRSGSVESKKEDDGASISMVEAAKILIAMANDGFCKRKKKESPTVKQSKKSPTA 80

Query: 82  ----TTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKNHG 141
               T+ T K KKK+ + +  S P+MP +MRDR+V  GGY I+LVIQKQL+++D+++NHG
Sbjct: 81  KKRKTSPTAKQKKKSMELEE-SFPEMPASMRDRVVGKGGYEIQLVIQKQLEESDVSRNHG 140

Query: 142 RLSLPRQKLLFDFASEEERKLLSKQEN---KNKKGMNVVIMDDVFEERMICLKKWKIGSG 201
           RL LP +K+  +F  EEER +L ++ +   KNKKG+ V +MDD   E  +CLKKWKIGSG
Sbjct: 141 RLCLPAKKVKTEFVREEERNILEEENDGKKKNKKGLEVGVMDDSLRESSMCLKKWKIGSG 200

Query: 202 DVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASRLCFAMVKL 235
             YCLM +WN FVEE  L+SG YIQ+W FR +    + +LCFA+VKL
Sbjct: 201 KFYCLMKNWNCFVEENGLRSGDYIQLWSFRNN---ISDKLCFAIVKL 243

BLAST of Cla003924 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 9.6e-76
Identity = 158/265 (59.62%), Postives = 189/265 (71.32%), Query Frame = 1

Query: 1   MVKETIVK-GFEMGLDIPDLSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILI 60
           MV ET V+ G  + L +PDL+ +Y+PR+RRGS  G  KKE        PLSM+E A ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  QFSQSFPDTEPEKINKTHKRNRP------STTMTKKHKKK-------AKQSKYLSI---- 120
           Q + S PD  P+KINKT KR  P      ST+ TK+ +KK        K+ + +++    
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 -PDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLL 180
            P MPVAMRDRI+EMGGY I LVIQKQL DTDLNKNHGRLS+  ++L FDFA+EEE KLL
Sbjct: 121 RPSMPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLL 180

Query: 181 SKQENKNKKGMNVVIMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQ 238
           S+QENKNK G+NV+I+DDV EERM+CLKKWKIGSG VYCLMT WN  VEE  LKSG+ IQ
Sbjct: 181 SEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQ 240

BLAST of Cla003924 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 9.6e-76
Identity = 150/248 (60.48%), Postives = 186/248 (75.00%), Query Frame = 1

Query: 1   MVKETIVKGFEMGLDIPDLSQIYIPRRRRGSGARKKEH-------PLSMSEVADILIQFS 60
           M +   V+GF M  ++   +Q Y+P+RRR      KE        P+SMSE AD+LI+ +
Sbjct: 1   MEERIAVEGFRM--NVHSFNQFYVPQRRRSFRVEIKEQSNPQTHLPISMSEAADVLIEMA 60

Query: 61  QSFPDTEPEKINKTHKRNRPSTTMT----KKHKKKAKQSKYLSIPDMPVAMRDRIVEMGG 120
            S P+ EP++INKTHKR  P  T T    ++ KKK +QS+Y SIP+MP  MRDRI EMGG
Sbjct: 61  NSVPNVEPQQINKTHKRKNPPRTNTAIKKQRRKKKVEQSEYPSIPEMPTTMRDRIEEMGG 120

Query: 121 YGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVVIMD 180
           Y I LVIQKQL DTDLNKN GRLS+P++KL FDF +EEER LLS+QENKNKKG+NV+IM+
Sbjct: 121 YEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKGINVMIMN 180

Query: 181 DVFEE-RMICLKKWKIGS--GDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASR 235
           ++ E+ R ICLKKWKIGS  GDVYCLMT WN+FVEET LKSGQ+IQ+WCFRKD EF+  R
Sbjct: 181 NMVEDIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRKDYEFEPPR 240

BLAST of Cla003924 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72
Identity = 153/247 (61.94%), Postives = 179/247 (72.47%), Query Frame = 1

Query: 4   ETIVK-GFEMGLDIPDLSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILIQFS 63
           ET V+ G  + L +PDL+ +Y+PR+RRGS  G  KKE        PLSM+E A ILIQ +
Sbjct: 2   ETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLA 61

Query: 64  QSFPDTEPEKINKTHKRNRP------STTMTKKHKK-KAKQSKYLSIPDMPVAMRDRIVE 123
            S PD   +KINKT KR  P      ST+ TKK +K    QS+    P MPVAMRDRI+E
Sbjct: 62  NSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSER---PSMPVAMRDRILE 121

Query: 124 MGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVV 183
           MGGY I LVIQKQL DTDLNKNHGRLS+  ++L FDFA+EEE KLLS+QENKNK G+NV+
Sbjct: 122 MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 181

Query: 184 IMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASR 234
            +DDV EERM+CLKKWKIGSG VYCLMT WN  VEE  LKSG+ IQVW FRKDDE +A R
Sbjct: 182 TLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHR 241

BLAST of Cla003924 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 6.2e-67
Identity = 142/247 (57.49%), Postives = 170/247 (68.83%), Query Frame = 1

Query: 19  LSQIYIPRRRRGS--GARKKEH-------PLSMSEVADILIQFSQSFP------------ 78
           L+ IYIPR+RRGS  GA K++        PLSM E A ILI+ + S P            
Sbjct: 20  LNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILIELANSVPVPDVQRQKFNKT 79

Query: 79  -----DTEPEKINKTHKRNRP------STTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVE 138
                D E +K+NKTHKR  P      ST+ TKK +KK    +    P MPV MRDRI+E
Sbjct: 80  ANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVNKR--EHPPMPVTMRDRILE 139

Query: 139 MGGYGIRLVIQKQLQDTDLNKNHGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVV 198
           MGGY IRLVIQK+L DTDLNKNHGR S+  + L FDFA+EEE KLLS+QENKNKKG+NV+
Sbjct: 140 MGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKGINVM 199

Query: 199 IMDDVFEERMICLKKWKIGSGDVYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASR 234
           I+DD  EER++CLKKWKIGSG+VYCLMT WN  VE+   KSG+ IQVW FRKDDE++A R
Sbjct: 200 ILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRKDDEYEAHR 259

BLAST of Cla003924 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 5.7e-60
Identity = 116/169 (68.64%), Postives = 138/169 (81.66%), Query Frame = 1

Query: 69  KRNRPSTTMTKKHKKKAKQSKYLSIPDMPVAMRDRIVEMGGYGIRLVIQKQLQDTDLNKN 128
           ++N  ST+ TKK +KK    K +  P MPVAMRDRI+EMGGY IRLVIQKQL DTDLNKN
Sbjct: 21  EKNLASTSRTKKQRKK--YVKQIEHPSMPVAMRDRILEMGGYEIRLVIQKQLTDTDLNKN 80

Query: 129 HGRLSLPRQKLLFDFASEEERKLLSKQENKNKKGMNVVIMDDVFEERMICLKKWKIGSGD 188
           HGRLS+  ++L FDFA+EEE KLLS+QENKNK+G+NV+++DDV EERM+CLKKWKIGSG+
Sbjct: 81  HGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKIGSGE 140

Query: 189 VYCLMTHWNSFVEETRLKSGQYIQVWCFRKDDEFQASRLCFAMVKLPPC 238
           VYCLMT WN  VEE   K G+ IQVW FRKDDE++A RLCFA+VKL  C
Sbjct: 141 VYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYEAHRLCFALVKLATC 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y2741_ARATH7.0e-1025.84Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g2... [more]
Y5849_ARATH4.5e-0928.02B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana GN=At5g38490 PE=2... [more]
Y1592_ARATH5.0e-0831.21B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y2467_ARATH2.5e-0727.87B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2... [more]
Y1203_ARATH9.5e-0725.59B3 domain-containing protein At1g32030 OS=Arabidopsis thaliana GN=At1g32030 PE=3... [more]
Match NameE-valueIdentityDescription
A0A0A0KP87_CUCSA6.7e-7659.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA3.4e-7261.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA4.3e-6757.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA2.6e-4872.18Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
A0A0A0LRL4_CUCSA1.6e-4547.14Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778703844|ref|XP_011655441.1|9.6e-7659.62PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|659072764|ref|XP_008467039.1|9.6e-7660.48PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo][more]
gi|700196319|gb|KGN51496.1|4.9e-7261.94hypothetical protein Csa_5G570410 [Cucumis sativus][more]
gi|700196320|gb|KGN51497.1|6.2e-6757.49hypothetical protein Csa_5G570420 [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|5.7e-6068.64PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005508DUF313
IPR015300DNA-bd_pseudobarrel_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015824 proline transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003924Cla003924.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 99..201
score: 9.5
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 115..220
score: 7.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 115..229
score: 7.65
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 77..236
score: 1.4
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 77..236
score: 1.4

The following gene(s) are paralogous to this gene:

None