Lsi09G005860 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G005860
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr09 : 6309483 .. 6311024 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGCTCAAGAGGCTAACTCAAATCCCTCAAATACCCATTTCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCGTCTTCACAACCCACAACTGAAATCGAAAGAATCGCCAAAATTATCAACGACCACCCATTTCCCGACCACCCCCTTCAACCCATTCTTCTTCACCACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGCCTCTTTGCAGCCCATTCCAATGGCCTCAAAGCCTTAGAGTTTTTCAAATTCTGCCTTCACCATTCTCAAGCTTCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTTGATCAATCATGGGAATTGATGCGTGAGATTGGACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCATTCGAAGAAACTATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGACCGATGTTACTGCTGTTGAGCTTTTTTATCATGAGATGATTAAGAGAGGTTTCAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGTTGTTTTGTGGATGGTTTGAGAGTTCTTAAAGAAATGGAGAGGGCAAAATTTGAGCCAACATTGGAAACAATCACTACTCTGATCCATGGAGCAGGGTTAACAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTATGTCCTGACATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTGTGCAGCAGCTTTAATGGAAGATATGGAAGCTAAACACATTGGACATGACAGTCTGACCTATCATATGATGTTCTCAGGCCTGATGCGATTGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAGATGGTACGAAGAAATTTCGTGCCTAAAACACGAACGGTAATCATGATAATGAAGTTTTTCTGCGAAAATCGCCGAGTTGATTTGGGTTTGGAATTGTGGGGTTATCTGGTAGAGAAGGGTTACTGTCCTCATAGTCATGTTTTGGATCTGTTGGTGACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCAGCATTTCTGATCATGAAGAGATCTCTTTTGCAGGCACATGCAACAGACAATTATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAACCAGCTTTCATCTGAGATTTCAGCATCCTCATAG

mRNA sequence

ATGGCGATGCTCAAGAGGCTAACTCAAATCCCTCAAATACCCATTTCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCGTCTTCACAACCCACAACTGAAATCGAAAGAATCGCCAAAATTATCAACGACCACCCATTTCCCGACCACCCCCTTCAACCCATTCTTCTTCACCACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGCCTCTTTGCAGCCCATTCCAATGGCCTCAAAGCCTTAGAGTTTTTCAAATTCTGCCTTCACCATTCTCAAGCTTCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTTGATCAATCATGGGAATTGATGCGTGAGATTGGACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCATTCGAAGAAACTATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGACCGATGTTACTGCTGTTGAGCTTTTTTATCATGAGATGATTAAGAGAGGTTTCAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGTTGTTTTGTGGATGGTTTGAGAGTTCTTAAAGAAATGGAGAGGGCAAAATTTGAGCCAACATTGGAAACAATCACTACTCTGATCCATGGAGCAGGGTTAACAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTATGTCCTGACATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTGTGCAGCAGCTTTAATGGAAGATATGGAAGCTAAACACATTGGACATGACAGTCTGACCTATCATATGATGTTCTCAGGCCTGATGCGATTGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAGATGGTACGAAGAAATTTCGTGCCTAAAACACGAACGGTAATCATGATAATGAAGTTTTTCTGCGAAAATCGCCGAGTTGATTTGGGTTTGGAATTGTGGGGTTATCTGGTAGAGAAGGGTTACTGTCCTCATAGTCATGTTTTGGATCTGTTGGTGACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCAGCATTTCTGATCATGAAGAGATCTCTTTTGCAGGCACATGCAACAGACAATTATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAACCAGCTTTCATCTGAGATTTCAGCATCCTCATAG

Coding sequence (CDS)

ATGGCGATGCTCAAGAGGCTAACTCAAATCCCTCAAATACCCATTTCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCGTCTTCACAACCCACAACTGAAATCGAAAGAATCGCCAAAATTATCAACGACCACCCATTTCCCGACCACCCCCTTCAACCCATTCTTCTTCACCACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGCCTCTTTGCAGCCCATTCCAATGGCCTCAAAGCCTTAGAGTTTTTCAAATTCTGCCTTCACCATTCTCAAGCTTCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTTGATCAATCATGGGAATTGATGCGTGAGATTGGACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCATTCGAAGAAACTATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGACCGATGTTACTGCTGTTGAGCTTTTTTATCATGAGATGATTAAGAGAGGTTTCAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGTTGTTTTGTGGATGGTTTGAGAGTTCTTAAAGAAATGGAGAGGGCAAAATTTGAGCCAACATTGGAAACAATCACTACTCTGATCCATGGAGCAGGGTTAACAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTATGTCCTGACATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTGTGCAGCAGCTTTAATGGAAGATATGGAAGCTAAACACATTGGACATGACAGTCTGACCTATCATATGATGTTCTCAGGCCTGATGCGATTGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAGATGGTACGAAGAAATTTCGTGCCTAAAACACGAACGGTAATCATGATAATGAAGTTTTTCTGCGAAAATCGCCGAGTTGATTTGGGTTTGGAATTGTGGGGTTATCTGGTAGAGAAGGGTTACTGTCCTCATAGTCATGTTTTGGATCTGTTGGTGACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCAGCATTTCTGATCATGAAGAGATCTCTTTTGCAGGCACATGCAACAGACAATTATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAACCAGCTTTCATCTGAGATTTCAGCATCCTCATAG

Protein sequence

MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQLRKKLKTVLPPPNQLSSEISASS
Homology
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BLAST of Lsi09G005860 vs. Swiss-Prot
Match: PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 1.1e-158
Identity = 286/491 (58.25%), Postives = 368/491 (74.95%), Query Frame = 1 

Query: 15  ISSHSFLILAAP-FCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLP 74
           ISS S+  L AP   +   L  +S   TEIERI  IIN HPFP+HP+QPIL  HIP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSW 134
           S  F+++VLGRLFAAHSNGLKALEFFK+ L  S+ SSPT D+FEKTLHILARMRYFDQ+W
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSK-SSPTSDSFEKTLHILARMRYFDQAW 124

Query: 135 ELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVL 194
            LM E+ + +P LL+ KSMSILL KIAKF S+EET+EAF +ME E+F  +KFG +EFN+L
Sbjct: 125 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNIL 184

Query: 195 LRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFK 254
           LRAFCT+R+MKEARS+F+K++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM+KRGFK
Sbjct: 185 LRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFK 244

Query: 255 PNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQL 314
           PN+VTY IRID +CK+  F + LR+ ++M+R  F+ T++ +TTLIHG+G+ ++K KARQL
Sbjct: 245 PNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQL 304

Query: 315 FDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMR 374
           FDEI+ R L PD GAYNAL+SSL++  DV  A  +M++ME K I  DS+T+H MF G+M+
Sbjct: 305 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMK 364

Query: 375 LEDVG--GFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHS 434
            ++ G  G  E Y KM  R+ VPKT T++M+MK FC N  V+LGL+LW Y++EKGYCPH 
Sbjct: 365 SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHG 424

Query: 435 HVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQL 494
           H L+LL T LCAR     AFECS Q +ERGR +SE  + +++ SL   +      EL++ 
Sbjct: 425 HALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEE 484

Query: 495 RKKLKTVLPPP 503
            +KL + LPPP
Sbjct: 485 IQKLHSFLPPP 493

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BLAST of Lsi09G005860 vs. Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 4.6e-59
Identity = 138/432 (31.94%), Postives = 231/432 (53.47%), Query Frame = 1 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFC-----LHHSQASSPTPDAFEKTLHILARMRY 133
           S   ++ VL R+  +H N ++ LEF+++       +HS  S  T       L+IL R R 
Sbjct: 70  SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDT------MLYILGRNRK 129

Query: 134 FDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTE 193
           FDQ WEL+ E  R    L++ ++M ++L ++AK  S  +T+E+F + +    V   F T 
Sbjct: 130 FDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTA 189

Query: 194 EFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMI 253
            FN LLR  C ++ M +AR+V+  +  +F P+ +T N+LL G+K S +    E F+ EM 
Sbjct: 190 CFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEA---EAFFEEMK 249

Query: 254 KRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKT 313
            +G KP+ VTY+  ID YCK        +++ +M   +  P + T TT+I G GL     
Sbjct: 250 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 309

Query: 314 KARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMF 373
           KAR++  E+      PD+ AYNA I +   +  +  A  L+++M  K +  ++ TY++ F
Sbjct: 310 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 369

Query: 374 SGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYC 433
             L    D+G  +ELY +M+    +P T++ + ++K F  + +VD+ + LW  +V KG+ 
Sbjct: 370 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 429

Query: 434 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGEL 493
            +S V D+L+  LC    V +A +C  +M+E+G + S  +F  +K  +  A+  D    L
Sbjct: 430 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 489

Query: 494 EQLRKKLKTVLP 501
            Q      T +P
Sbjct: 490 IQKMAIFSTEIP 490

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BLAST of Lsi09G005860 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.3e-41
Identity = 130/501 (25.95%), Postives = 240/501 (47.90%), Query Frame = 1 

Query: 6   RLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTT--------EIERIAKIINDHPFPD 65
           R++      + S  ++  A+ F  +   H SS  T         + ERI KI+    F D
Sbjct: 21  RISSSSSPSLESIPWIHKASNFTLYGSFHASSVETQVSANDASQDAERICKILTK--FTD 80

Query: 66  HPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFE 125
             ++ +L  +  S   S   + +VL +L  A   G+ AL  FK+   + +    T   + 
Sbjct: 81  SKVETLL--NEASVKLSPALIEEVLKKLSNA---GVLALSVFKWA-ENQKGFKHTTSNYN 140

Query: 126 KTLHILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMEN 185
             +  L +++ F   W L+ ++      LL+ ++ +++  + A+ +  +E I AF +ME 
Sbjct: 141 ALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEE 200

Query: 186 EVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYS-RFPPNTKTMNLLLLGFKESTD 245
               G K  + +FN +L      R + +A+ VF KM   RF P+ K+  +LL G+ +  +
Sbjct: 201 ---FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 260

Query: 246 VTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITT 305
           +  V+    EM   GF+P+ V Y I I+A+CK   + + +R   EME+   +P+     +
Sbjct: 261 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 320

Query: 306 LIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKH 365
           LI+G G  K    A + F+         +   YNAL+ +   S  ++ A   +++M  K 
Sbjct: 321 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 380

Query: 366 IGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGL 425
           +G ++ TY ++   L+R++     YE+Y  M   +  P   T  ++++ FC   R+D+ +
Sbjct: 381 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAI 440

Query: 426 ELWGYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSL 485
           ++W  +  KG  P  H+   L+T LC    + +A E   +ML+ G +     F  +K++L
Sbjct: 441 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 500

Query: 486 L----QAHATDNYGELEQLRK 494
           L    +   TD   ++++LRK
Sbjct: 501 LDEGRKDKVTDLVVKMDRLRK 505

[Close]
BLAST of Lsi09G005860 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 6.3e-40
Identity = 108/429 (25.17%), Postives = 213/429 (49.65%), Query Frame = 1 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSW 133
           S   + DVL R   A   GL    FF++     +    +  A+   +   A++R +   W
Sbjct: 99  SQEVVEDVLNRFRNA---GLLTYRFFQWS-EKQRHYEHSVRAYHMMIESTAKIRQYKLMW 158

Query: 134 ELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVL 193
           +L+  + +    +L +++  I++ K A+ Q  +E I AF  ME             FN L
Sbjct: 159 DLINAMRKKK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVA---FNGL 218

Query: 194 LRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFK 253
           L A C  + +++A+ VF+ M  RF P++KT ++LL G+ +  ++      + EMI  G  
Sbjct: 219 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 278

Query: 254 PNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQL 313
           P+ VTYSI +D  CK G   + L +++ M+ +  +PT    + L+H  G      +A   
Sbjct: 279 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 338

Query: 314 FDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMR 373
           F E+    +  D+  +N+LI +  +++ +K    ++++M++K +  +S + +++   L+ 
Sbjct: 339 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 398

Query: 374 LEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHV 433
             +    ++++ KM+ +   P   T  M++K FCE + ++   ++W Y+ +KG  P  H 
Sbjct: 399 RGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 458

Query: 434 LDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQLRK 493
             +L+ GLC      +A    ++M+E G + S   F  +++ L++    D    L+ L +
Sbjct: 459 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED---VLKFLNE 514

Query: 494 KLKTVLPPP 503
           K+  ++  P
Sbjct: 519 KMNVLVNEP 514

[Close]
BLAST of Lsi09G005860 vs. Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.0e-34
Identity = 107/426 (25.12%), Postives = 197/426 (46.24%), Query Frame = 1 

Query: 39  PTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEF 98
           P  +   IAK+I   P   H     LL    +P   N  +N VL RL+   ++G KAL+F
Sbjct: 21  PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPN-LVNSVLKRLW---NHGPKALQF 80

Query: 99  FKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSK 158
           F F  +H +       +F+  + I AR+      W L+  + R+     + K+ +I+  +
Sbjct: 81  FHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM-RSLRIGPSPKTFAIVAER 140

Query: 159 IAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFP 218
            A     ++ ++ F  M      G       FN +L   C  +++++A  +F+ +  RF 
Sbjct: 141 YASAGKPDKAVKLFLNMHEH---GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS 200

Query: 219 PNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRV 278
            +T T N++L G+              EM++RG  PN  TY+  +  + + G        
Sbjct: 201 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 260

Query: 279 LKEMERAKFEPTLETITTLIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIR 338
             EM++   E  + T TT++HG G+  +  +AR +FDE+    + P +  YNA+I  L +
Sbjct: 261 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 320

Query: 339 SDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRT 398
            D+V+ A  + E+M  +    +  TY+++  GL    +     EL  +M      P  +T
Sbjct: 321 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 380

Query: 399 VIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHVLDLLVTGLCARGM---VLQAFECSK 458
             M+++++ E   V+  L L+  +      P+    ++L++G+  R     ++ A +   
Sbjct: 381 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLL 438

Query: 459 QMLERG 462
           +M+ERG
Sbjct: 441 EMVERG 438

[Close]
BLAST of Lsi09G005860 vs. TrEMBL
Match: A0A0A0KRS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173440 PE=4 SV=1)

HSP 1 Score: 884.8 bits (2285), Expect = 5.1e-254
Identity = 444/501 (88.62%), Postives = 467/501 (93.21%), Query Frame = 1 

Query: 1   MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPL 60
           MA+L +LT IPQ PISSHSFLILAA +CT+LH  PSS+ TTEIERIAKIINDHPFPD PL
Sbjct: 1   MAVLMKLTLIPQKPISSHSFLILAASYCTNLH--PSSKSTTEIERIAKIINDHPFPDQPL 60

Query: 61  QPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTL 120
            P LLH IPSPLPSNTFLNDVLG+LFAAHSNGLKALEFFKFCLHHSQA  PT DAFEKTL
Sbjct: 61  HPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAP-PTSDAFEKTL 120

Query: 121 HILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVF 180
           HIL+RMRYFDQSWELMREI +THPFLLTLKSMSILLS+IAKF SFEETIEAFQRMENEVF
Sbjct: 121 HILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVF 180

Query: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAV 240
           VGRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKES+D+T+V
Sbjct: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSV 240

Query: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHG 300
           ELFYHEMIKRGFKPNAVTYSIRIDAYCK+GCFVDGLRV KEMERAK EPTLETITTLIHG
Sbjct: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHG 300

Query: 301 AGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHD 360
           AG+ KDKTKARQLFDEI LRNLCPDIGAYNALISSLIRS DVK AA++MEDMEAKHI HD
Sbjct: 301 AGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHD 360

Query: 361 SLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWG 420
           S+TYHMMFSGL+RLEDVGGFYELY KMV RNFVPKTRT +MIMKFFCENRRVDLGL  W 
Sbjct: 361 SVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWA 420

Query: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAH 480
           YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIM+R LL+AH
Sbjct: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAH 480

Query: 481 ATDNYGELEQLRKKLKTVLPP 502
           ATD Y ELE+LRKKLKTVLPP
Sbjct: 481 ATDKYEELERLRKKLKTVLPP 498

[Close]
BLAST of Lsi09G005860 vs. TrEMBL
Match: A5AKR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012424 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 7.4e-189
Identity = 329/497 (66.20%), Postives = 402/497 (80.89%), Query Frame = 1 

Query: 5   KRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPIL 64
           KR  Q  QIP     FL +A  F +    HPS +  +EI+R+ +IINDHPFPDHPL   L
Sbjct: 7   KRSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTL 66

Query: 65  LHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILA 124
           + H+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+   P+ DAFEKTLHIL 
Sbjct: 67  IQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC-PSSDAFEKTLHILT 126

Query: 125 RMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRK 184
           RMRYFD++WELM EI +THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+
Sbjct: 127 RMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGRE 186

Query: 185 FGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFY 244
           FG  EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFY
Sbjct: 187 FGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFY 246

Query: 245 HEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLT 304
           HEMI+RGFKPN+VTY+IRIDAYCK+GCF DGLR+L+EME+A   PTLETITTLIHGAG+ 
Sbjct: 247 HEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVA 306

Query: 305 KDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTY 364
           ++ ++AR+LF+EI++RNL PDIG YNA +SSLIRS +V+ A  LM++ME + IGHDS+TY
Sbjct: 307 QNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTY 366

Query: 365 HMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVE 424
           H MF GLMR   + G  ELY KM+RRNFVPKTRT++M+MK+FC+N+++DL L+LWGYL++
Sbjct: 367 HTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLID 426

Query: 425 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDN 484
           +GYCPH H LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F +++R L++A   + 
Sbjct: 427 RGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEM 486

Query: 485 YGELEQLRKKLKTVLPP 502
             +L+Q+ KKL TVLPP
Sbjct: 487 LWKLDQMIKKLHTVLPP 500

[Close]
BLAST of Lsi09G005860 vs. TrEMBL
Match: D7SS92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0117g00160 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 7.4e-189
Identity = 329/497 (66.20%), Postives = 402/497 (80.89%), Query Frame = 1 

Query: 5   KRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPIL 64
           KR  Q  QIP     FL +A  F +    HPS +  +EI+R+ +IINDHPFPDHPL   L
Sbjct: 7   KRSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTL 66

Query: 65  LHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILA 124
           + H+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+   P+ DAFEKTLHIL 
Sbjct: 67  IQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC-PSSDAFEKTLHILT 126

Query: 125 RMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRK 184
           RMRYFD++WELM EI +THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+
Sbjct: 127 RMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGRE 186

Query: 185 FGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFY 244
           FG  EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFY
Sbjct: 187 FGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFY 246

Query: 245 HEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLT 304
           HEMI+RGFKPN+VTY+IRIDAYCK+GCF DGLR+L+EME+A   PTLETITTLIHGAG+ 
Sbjct: 247 HEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVA 306

Query: 305 KDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTY 364
           ++ ++AR+LF+EI++RNL PDIG YNA +SSLIRS +V+ A  LM++ME + IGHDS+TY
Sbjct: 307 QNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTY 366

Query: 365 HMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVE 424
           H MF GLMR   + G  ELY KM+RRNFVPKTRT++M+MK+FC+N+++DL L+LWGYL++
Sbjct: 367 HTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLID 426

Query: 425 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDN 484
           +GYCPH H LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F +++R L++A   + 
Sbjct: 427 RGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEM 486

Query: 485 YGELEQLRKKLKTVLPP 502
             +L+Q+ KKL TVLPP
Sbjct: 487 LWKLDQMIKKLHTVLPP 500

[Close]
BLAST of Lsi09G005860 vs. TrEMBL
Match: M5X718_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003671mg PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 5.3e-187
Identity = 328/501 (65.47%), Postives = 397/501 (79.24%), Query Frame = 1 

Query: 1   MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPL 60
           M  LKR  Q+ QIP   +  +I A    +     PSS+   E++RI +IIN+HP+PD PL
Sbjct: 1   MTRLKRSNQLTQIPPKLNFSVIHALKISSQFL--PSSETNIEVDRITRIINNHPYPDQPL 60

Query: 61  QPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTL 120
            P LL HIP    S +F+ +VLG LFAAHSNGLKALEFF + LHHSQ   P+ DAFEKTL
Sbjct: 61  LPTLLQHIPPHALSTSFVENVLGYLFAAHSNGLKALEFFNYSLHHSQLC-PSSDAFEKTL 120

Query: 121 HILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVF 180
           HILARMRYFD++W+LM +I   HP LLTLKSMSI+LSKIAKFQS+E+ +EAF +MEN++F
Sbjct: 121 HILARMRYFDKAWDLMEKISSMHPSLLTLKSMSIMLSKIAKFQSYEDVLEAFGKMENDIF 180

Query: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAV 240
           VGRKFGTEEFNVLLRAFCT+RQMKEARSVF KM+ RF PNTKTMN+LLLGFKES D+TAV
Sbjct: 181 VGRKFGTEEFNVLLRAFCTERQMKEARSVFLKMHFRFSPNTKTMNILLLGFKESGDITAV 240

Query: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHG 300
           ELFYHE++KRGF+PN +TY+IRIDAYCK+GCF DGLR+ + MER    PTLETITTLIHG
Sbjct: 241 ELFYHELVKRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHG 300

Query: 301 AGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHD 360
           AG+ ++  KA+QLFDEI LRNL PD G YNAL+SSLIRS DVK A ALM++ME KHI HD
Sbjct: 301 AGVARNPIKAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDVKSAVALMDEMEVKHIEHD 360

Query: 361 SLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWG 420
           ++TYH MFS LMR  D+ G   LY KMV R+FVPKTRTV+M+MK+FC N+++DLGL LW 
Sbjct: 361 NMTYHTMFSCLMRTSDIDGVSGLYHKMVDRSFVPKTRTVVMLMKYFCVNQQLDLGLHLWR 420

Query: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAH 480
           YLVEKG CPH H LDLL+TGLC+R  V++AFECSKQMLERGR MSE A  I++  L++A 
Sbjct: 421 YLVEKGCCPHGHALDLLLTGLCSRSRVIEAFECSKQMLERGRDMSEPALRILESFLVRAG 480

Query: 481 ATDNYGELEQLRKKLKTVLPP 502
             D   +L+Q+ ++L T+LPP
Sbjct: 481 EMDKLRKLKQMIQRLHTLLPP 498

[Close]
BLAST of Lsi09G005860 vs. TrEMBL
Match: W9T0E2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022712 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 7.7e-186
Identity = 320/467 (68.52%), Postives = 382/467 (81.80%), Query Frame = 1 

Query: 32  HLHPSSQPTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSN 91
           H +PSS+   EIERI +IINDHPFPD PLQP LL HIP  + SNTF+ +VLGRLFAAHSN
Sbjct: 33  HRNPSSETKIEIERITRIINDHPFPDQPLQPTLLQHIPLAVLSNTFVENVLGRLFAAHSN 92

Query: 92  GLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSWELMREIGRTHPFLLTLKS 151
           GLKALEFF+F L HSQ S P+ DAFEKTLHIL RMRYF+++WELM  IGR HP  LTLKS
Sbjct: 93  GLKALEFFEFSLRHSQFS-PSADAFEKTLHILVRMRYFEKAWELMATIGREHPCCLTLKS 152

Query: 152 MSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQ 211
           MSI+LSKIAKFQS+E+T+ AF++MEN+VFVG+KFGT+EFN+LLRAFCTQRQMKEARSVF+
Sbjct: 153 MSIMLSKIAKFQSYEDTLAAFEKMENDVFVGKKFGTDEFNILLRAFCTQRQMKEARSVFR 212

Query: 212 KMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGC 271
           KMYSRF P+ K+MN+LL GFKES D+TA ELFYHEM+ RGF+PN VTY+IRIDAYCK GC
Sbjct: 213 KMYSRFSPDKKSMNILLSGFKESGDITAAELFYHEMVARGFRPNVVTYNIRIDAYCKAGC 272

Query: 272 FVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNA 331
             DGLR+L+EME+A F PTLETITTLIHGAG+ ++  K +QLF EI  RNL PD G YNA
Sbjct: 273 LGDGLRLLEEMEQANFSPTLETITTLIHGAGIARNLIKVQQLFQEIPFRNLHPDTGVYNA 332

Query: 332 LISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRN 391
           L+SSLIR  D+K A ALM++ME KHI HD +TYH+MFSG+++  D  G   L+ KMV+ N
Sbjct: 333 LMSSLIRCKDLKSAVALMDEMEEKHIDHDYMTYHIMFSGMIKKMDFEGVSHLFDKMVQNN 392

Query: 392 FVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHVLDLLVTGLCARGMVLQAF 451
           FVPKTRTV+M+MKFFC N RVDLGL LW YL+ KGYCPH H L+LL+TGLC+RG V +AF
Sbjct: 393 FVPKTRTVVMLMKFFCANSRVDLGLYLWEYLMGKGYCPHGHALELLLTGLCSRGFVKEAF 452

Query: 452 ECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQLRKKLKTV 499
           ECSKQ+LERGR +SEAAF +++R LLQ    D   +L Q+  KL T+
Sbjct: 453 ECSKQVLERGRHLSEAAFRLIERRLLQEGEKDQLRKLNQMIDKLPTL 498

[Close]
BLAST of Lsi09G005860 vs. TAIR10
Match: AT3G61360.1 (AT3G61360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 561.2 bits (1445), Expect = 6.5e-160
Identity = 286/491 (58.25%), Postives = 368/491 (74.95%), Query Frame = 1 

Query: 15  ISSHSFLILAAP-FCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLP 74
           ISS S+  L AP   +   L  +S   TEIERI  IIN HPFP+HP+QPIL  HIP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSW 134
           S  F+++VLGRLFAAHSNGLKALEFFK+ L  S+ SSPT D+FEKTLHILARMRYFDQ+W
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSK-SSPTSDSFEKTLHILARMRYFDQAW 124

Query: 135 ELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVL 194
            LM E+ + +P LL+ KSMSILL KIAKF S+EET+EAF +ME E+F  +KFG +EFN+L
Sbjct: 125 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNIL 184

Query: 195 LRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFK 254
           LRAFCT+R+MKEARS+F+K++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM+KRGFK
Sbjct: 185 LRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFK 244

Query: 255 PNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQL 314
           PN+VTY IRID +CK+  F + LR+ ++M+R  F+ T++ +TTLIHG+G+ ++K KARQL
Sbjct: 245 PNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQL 304

Query: 315 FDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMR 374
           FDEI+ R L PD GAYNAL+SSL++  DV  A  +M++ME K I  DS+T+H MF G+M+
Sbjct: 305 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMK 364

Query: 375 LEDVG--GFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHS 434
            ++ G  G  E Y KM  R+ VPKT T++M+MK FC N  V+LGL+LW Y++EKGYCPH 
Sbjct: 365 SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHG 424

Query: 435 HVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQL 494
           H L+LL T LCAR     AFECS Q +ERGR +SE  + +++ SL   +      EL++ 
Sbjct: 425 HALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEE 484

Query: 495 RKKLKTVLPPP 503
            +KL + LPPP
Sbjct: 485 IQKLHSFLPPP 493

[Close]
BLAST of Lsi09G005860 vs. TAIR10
Match: AT1G02420.1 (AT1G02420.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-60
Identity = 138/432 (31.94%), Postives = 231/432 (53.47%), Query Frame = 1 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFC-----LHHSQASSPTPDAFEKTLHILARMRY 133
           S   ++ VL R+  +H N ++ LEF+++       +HS  S  T       L+IL R R 
Sbjct: 70  SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDT------MLYILGRNRK 129

Query: 134 FDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTE 193
           FDQ WEL+ E  R    L++ ++M ++L ++AK  S  +T+E+F + +    V   F T 
Sbjct: 130 FDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTA 189

Query: 194 EFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMI 253
            FN LLR  C ++ M +AR+V+  +  +F P+ +T N+LL G+K S +    E F+ EM 
Sbjct: 190 CFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEA---EAFFEEMK 249

Query: 254 KRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKT 313
            +G KP+ VTY+  ID YCK        +++ +M   +  P + T TT+I G GL     
Sbjct: 250 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 309

Query: 314 KARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMF 373
           KAR++  E+      PD+ AYNA I +   +  +  A  L+++M  K +  ++ TY++ F
Sbjct: 310 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 369

Query: 374 SGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYC 433
             L    D+G  +ELY +M+    +P T++ + ++K F  + +VD+ + LW  +V KG+ 
Sbjct: 370 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 429

Query: 434 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGEL 493
            +S V D+L+  LC    V +A +C  +M+E+G + S  +F  +K  +  A+  D    L
Sbjct: 430 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 489

Query: 494 EQLRKKLKTVLP 501
            Q      T +P
Sbjct: 490 IQKMAIFSTEIP 490

[Close]
BLAST of Lsi09G005860 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-42
Identity = 130/501 (25.95%), Postives = 240/501 (47.90%), Query Frame = 1 

Query: 6   RLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTT--------EIERIAKIINDHPFPD 65
           R++      + S  ++  A+ F  +   H SS  T         + ERI KI+    F D
Sbjct: 21  RISSSSSPSLESIPWIHKASNFTLYGSFHASSVETQVSANDASQDAERICKILTK--FTD 80

Query: 66  HPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFE 125
             ++ +L  +  S   S   + +VL +L  A   G+ AL  FK+   + +    T   + 
Sbjct: 81  SKVETLL--NEASVKLSPALIEEVLKKLSNA---GVLALSVFKWA-ENQKGFKHTTSNYN 140

Query: 126 KTLHILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMEN 185
             +  L +++ F   W L+ ++      LL+ ++ +++  + A+ +  +E I AF +ME 
Sbjct: 141 ALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEE 200

Query: 186 EVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYS-RFPPNTKTMNLLLLGFKESTD 245
               G K  + +FN +L      R + +A+ VF KM   RF P+ K+  +LL G+ +  +
Sbjct: 201 ---FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 260

Query: 246 VTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITT 305
           +  V+    EM   GF+P+ V Y I I+A+CK   + + +R   EME+   +P+     +
Sbjct: 261 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 320

Query: 306 LIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKH 365
           LI+G G  K    A + F+         +   YNAL+ +   S  ++ A   +++M  K 
Sbjct: 321 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 380

Query: 366 IGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGL 425
           +G ++ TY ++   L+R++     YE+Y  M   +  P   T  ++++ FC   R+D+ +
Sbjct: 381 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAI 440

Query: 426 ELWGYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSL 485
           ++W  +  KG  P  H+   L+T LC    + +A E   +ML+ G +     F  +K++L
Sbjct: 441 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 500

Query: 486 L----QAHATDNYGELEQLRK 494
           L    +   TD   ++++LRK
Sbjct: 501 LDEGRKDKVTDLVVKMDRLRK 505

[Close]
BLAST of Lsi09G005860 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 3.6e-41
Identity = 108/429 (25.17%), Postives = 213/429 (49.65%), Query Frame = 1 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSW 133
           S   + DVL R   A   GL    FF++     +    +  A+   +   A++R +   W
Sbjct: 99  SQEVVEDVLNRFRNA---GLLTYRFFQWS-EKQRHYEHSVRAYHMMIESTAKIRQYKLMW 158

Query: 134 ELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVL 193
           +L+  + +    +L +++  I++ K A+ Q  +E I AF  ME             FN L
Sbjct: 159 DLINAMRKKK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVA---FNGL 218

Query: 194 LRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFK 253
           L A C  + +++A+ VF+ M  RF P++KT ++LL G+ +  ++      + EMI  G  
Sbjct: 219 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 278

Query: 254 PNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLTKDKTKARQL 313
           P+ VTYSI +D  CK G   + L +++ M+ +  +PT    + L+H  G      +A   
Sbjct: 279 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 338

Query: 314 FDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMR 373
           F E+    +  D+  +N+LI +  +++ +K    ++++M++K +  +S + +++   L+ 
Sbjct: 339 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 398

Query: 374 LEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHV 433
             +    ++++ KM+ +   P   T  M++K FCE + ++   ++W Y+ +KG  P  H 
Sbjct: 399 RGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 458

Query: 434 LDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDNYGELEQLRK 493
             +L+ GLC      +A    ++M+E G + S   F  +++ L++    D    L+ L +
Sbjct: 459 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED---VLKFLNE 514

Query: 494 KLKTVLPPP 503
           K+  ++  P
Sbjct: 519 KMNVLVNEP 514

[Close]
BLAST of Lsi09G005860 vs. TAIR10
Match: AT1G74900.1 (AT1G74900.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-35
Identity = 102/406 (25.12%), Postives = 187/406 (46.06%), Query Frame = 1 

Query: 39  PTTEIERIAKIINDHPFPDHPLQPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEF 98
           P  +   IAK+I   P   H     LL    +P   N  +N VL RL+   ++G KAL+F
Sbjct: 21  PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPN-LVNSVLKRLW---NHGPKALQF 80

Query: 99  FKFCLHHSQASSPTPDAFEKTLHILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSK 158
           F F  +H +       +F+  + I AR+      W L+  + R+     + K+ +I+  +
Sbjct: 81  FHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM-RSLRIGPSPKTFAIVAER 140

Query: 159 IAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFP 218
            A     ++ ++ F  M      G       FN +L   C  +++++A  +F+ +  RF 
Sbjct: 141 YASAGKPDKAVKLFLNMHEH---GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS 200

Query: 219 PNTKTMNLLLLGFKESTDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRV 278
            +T T N++L G+              EM++RG  PN  TY+  +  + + G        
Sbjct: 201 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 260

Query: 279 LKEMERAKFEPTLETITTLIHGAGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIR 338
             EM++   E  + T TT++HG G+  +  +AR +FDE+    + P +  YNA+I  L +
Sbjct: 261 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 320

Query: 339 SDDVKCAAALMEDMEAKHIGHDSLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRT 398
            D+V+ A  + E+M  +    +  TY+++  GL    +     EL  +M      P  +T
Sbjct: 321 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 380

Query: 399 VIMIMKFFCENRRVDLGLELWGYLVEKGYCPHSHVLDLLVTGLCAR 445
             M+++++ E   V+  L L+  +      P+    ++L++G+  R
Sbjct: 381 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVR 418

[Close]
BLAST of Lsi09G005860 vs. NCBI nr
Match: gi|659073036|ref|XP_008467224.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo])

HSP 1 Score: 905.6 bits (2339), Expect = 4.0e-260
Identity = 456/512 (89.06%), Postives = 475/512 (92.77%), Query Frame = 1 

Query: 1   MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPL 60
           MA+L +LTQIPQ PISSHSFLI AA +CTHLH     + TTEIERIAKIINDHPFPD PL
Sbjct: 5   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-----KSTTEIERIAKIINDHPFPDQPL 64

Query: 61  QPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTL 120
            P LLH IPSPLPSNTFLNDVLG LFAAHSNGLKALEFFKFCLHHSQAS PTPDAFEKTL
Sbjct: 65  HPTLLHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQAS-PTPDAFEKTL 124

Query: 121 HILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVF 180
           HILARMRYFDQSWELMREI +THPFLLTLKSMSILLS+IAKF+SFEETIEAFQRMENEVF
Sbjct: 125 HILARMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVF 184

Query: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAV 240
           VGRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKES+D+T+V
Sbjct: 185 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSV 244

Query: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHG 300
           ELFYHEMIKRGFKPNAVTYSIRIDAYCK+GCFVDGLRV KEMERAK EPTLETITTLIHG
Sbjct: 245 ELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHG 304

Query: 301 AGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHD 360
           AG+ KDKTKARQLFDEI LRNLCPDIGAYNALISSLIRS DVK AAALMEDMEAKHIGHD
Sbjct: 305 AGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHD 364

Query: 361 SLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWG 420
           S+TYHMMF GL+RLEDVGGF ELYSKMVR+NFVPKTRT + IMKFFCENRRVDL L  W 
Sbjct: 365 SVTYHMMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWA 424

Query: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAH 480
           YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIM+RSLL+A 
Sbjct: 425 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKAR 484

Query: 481 ATDNYGELEQLRKKLKTVLPPPNQLSSEISAS 513
           ATD YGELEQLRKKLKTVLPPPNQL SEI AS
Sbjct: 485 ATDKYGELEQLRKKLKTVLPPPNQLLSEIPAS 510

[Close]
BLAST of Lsi09G005860 vs. NCBI nr
Match: gi|449451922|ref|XP_004143709.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativus])

HSP 1 Score: 884.8 bits (2285), Expect = 7.2e-254
Identity = 444/501 (88.62%), Postives = 467/501 (93.21%), Query Frame = 1 

Query: 1   MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPL 60
           MA+L +LT IPQ PISSHSFLILAA +CT+LH  PSS+ TTEIERIAKIINDHPFPD PL
Sbjct: 1   MAVLMKLTLIPQKPISSHSFLILAASYCTNLH--PSSKSTTEIERIAKIINDHPFPDQPL 60

Query: 61  QPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTL 120
            P LLH IPSPLPSNTFLNDVLG+LFAAHSNGLKALEFFKFCLHHSQA  PT DAFEKTL
Sbjct: 61  HPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAP-PTSDAFEKTL 120

Query: 121 HILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVF 180
           HIL+RMRYFDQSWELMREI +THPFLLTLKSMSILLS+IAKF SFEETIEAFQRMENEVF
Sbjct: 121 HILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVF 180

Query: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAV 240
           VGRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKES+D+T+V
Sbjct: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSV 240

Query: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHG 300
           ELFYHEMIKRGFKPNAVTYSIRIDAYCK+GCFVDGLRV KEMERAK EPTLETITTLIHG
Sbjct: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHG 300

Query: 301 AGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHD 360
           AG+ KDKTKARQLFDEI LRNLCPDIGAYNALISSLIRS DVK AA++MEDMEAKHI HD
Sbjct: 301 AGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHD 360

Query: 361 SLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWG 420
           S+TYHMMFSGL+RLEDVGGFYELY KMV RNFVPKTRT +MIMKFFCENRRVDLGL  W 
Sbjct: 361 SVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWA 420

Query: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAH 480
           YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIM+R LL+AH
Sbjct: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAH 480

Query: 481 ATDNYGELEQLRKKLKTVLPP 502
           ATD Y ELE+LRKKLKTVLPP
Sbjct: 481 ATDKYEELERLRKKLKTVLPP 498

[Close]
BLAST of Lsi09G005860 vs. NCBI nr
Match: gi|147789025|emb|CAN75780.1| (hypothetical protein VITISV_012424 [Vitis vinifera])

HSP 1 Score: 668.3 bits (1723), Expect = 1.1e-188
Identity = 329/497 (66.20%), Postives = 402/497 (80.89%), Query Frame = 1 

Query: 5   KRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPIL 64
           KR  Q  QIP     FL +A  F +    HPS +  +EI+R+ +IINDHPFPDHPL   L
Sbjct: 7   KRSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTL 66

Query: 65  LHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILA 124
           + H+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+   P+ DAFEKTLHIL 
Sbjct: 67  IQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC-PSSDAFEKTLHILT 126

Query: 125 RMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRK 184
           RMRYFD++WELM EI +THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+
Sbjct: 127 RMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGRE 186

Query: 185 FGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFY 244
           FG  EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFY
Sbjct: 187 FGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFY 246

Query: 245 HEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLT 304
           HEMI+RGFKPN+VTY+IRIDAYCK+GCF DGLR+L+EME+A   PTLETITTLIHGAG+ 
Sbjct: 247 HEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVA 306

Query: 305 KDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTY 364
           ++ ++AR+LF+EI++RNL PDIG YNA +SSLIRS +V+ A  LM++ME + IGHDS+TY
Sbjct: 307 QNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTY 366

Query: 365 HMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVE 424
           H MF GLMR   + G  ELY KM+RRNFVPKTRT++M+MK+FC+N+++DL L+LWGYL++
Sbjct: 367 HTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLID 426

Query: 425 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDN 484
           +GYCPH H LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F +++R L++A   + 
Sbjct: 427 RGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEM 486

Query: 485 YGELEQLRKKLKTVLPP 502
             +L+Q+ KKL TVLPP
Sbjct: 487 LWKLDQMIKKLHTVLPP 500

[Close]
BLAST of Lsi09G005860 vs. NCBI nr
Match: gi|225460540|ref|XP_002272860.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Vitis vinifera])

HSP 1 Score: 668.3 bits (1723), Expect = 1.1e-188
Identity = 329/497 (66.20%), Postives = 402/497 (80.89%), Query Frame = 1 

Query: 5   KRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPLQPIL 64
           KR  Q  QIP     FL +A  F +    HPS +  +EI+R+ +IINDHPFPDHPL   L
Sbjct: 7   KRSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTL 66

Query: 65  LHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTLHILA 124
           + H+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+   P+ DAFEKTLHIL 
Sbjct: 67  IQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC-PSSDAFEKTLHILT 126

Query: 125 RMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRK 184
           RMRYFD++WELM EI +THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+
Sbjct: 127 RMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGRE 186

Query: 185 FGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAVELFY 244
           FG  EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFY
Sbjct: 187 FGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFY 246

Query: 245 HEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHGAGLT 304
           HEMI+RGFKPN+VTY+IRIDAYCK+GCF DGLR+L+EME+A   PTLETITTLIHGAG+ 
Sbjct: 247 HEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVA 306

Query: 305 KDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHDSLTY 364
           ++ ++AR+LF+EI++RNL PDIG YNA +SSLIRS +V+ A  LM++ME + IGHDS+TY
Sbjct: 307 QNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTY 366

Query: 365 HMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWGYLVE 424
           H MF GLMR   + G  ELY KM+RRNFVPKTRT++M+MK+FC+N+++DL L+LWGYL++
Sbjct: 367 HTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLID 426

Query: 425 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAHATDN 484
           +GYCPH H LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F +++R L++A   + 
Sbjct: 427 RGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEM 486

Query: 485 YGELEQLRKKLKTVLPP 502
             +L+Q+ KKL TVLPP
Sbjct: 487 LWKLDQMIKKLHTVLPP 500

[Close]
BLAST of Lsi09G005860 vs. NCBI nr
Match: gi|645250925|ref|XP_008231442.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X1 [Prunus mume])

HSP 1 Score: 666.0 bits (1717), Expect = 5.3e-188
Identity = 329/501 (65.67%), Postives = 398/501 (79.44%), Query Frame = 1 

Query: 1   MAMLKRLTQIPQIPISSHSFLILAAPFCTHLHLHPSSQPTTEIERIAKIINDHPFPDHPL 60
           +  LKR  Q+ QIP   +  +I A    +     PSS+   E++RI +IIN+HP+PD PL
Sbjct: 4   LTRLKRSNQLTQIPPKLNFSVIHAVKISSQFL--PSSETNIEVDRITRIINNHPYPDQPL 63

Query: 61  QPILLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASSPTPDAFEKTL 120
            P LL HIP    S +F+ +VLG LFAAHSNGLKALEFF + LHHSQ   P+ DAFEKTL
Sbjct: 64  LPTLLQHIPPHALSTSFVENVLGYLFAAHSNGLKALEFFNYSLHHSQLC-PSSDAFEKTL 123

Query: 121 HILARMRYFDQSWELMREIGRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVF 180
           HILARMRYFD++W+LM +I   HP LLTLKSMSI+LSKIAKFQS+E+ +EAF +MEN++F
Sbjct: 124 HILARMRYFDKAWDLMEKISSMHPSLLTLKSMSIMLSKIAKFQSYEDVLEAFDKMENDIF 183

Query: 181 VGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESTDVTAV 240
           VGRKFGTEEFNVLLRAFCT+RQMKEARSVF KM+ RF PNTKTMN+LLLGFKES D+TAV
Sbjct: 184 VGRKFGTEEFNVLLRAFCTERQMKEARSVFLKMHFRFSPNTKTMNILLLGFKESGDITAV 243

Query: 241 ELFYHEMIKRGFKPNAVTYSIRIDAYCKRGCFVDGLRVLKEMERAKFEPTLETITTLIHG 300
           ELFYHE++KRGF+PN +TY+IRIDAYCK+GCF DGLR+ + MER    PTLETITTLIHG
Sbjct: 244 ELFYHELVKRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHG 303

Query: 301 AGLTKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKCAAALMEDMEAKHIGHD 360
           AG+ ++  KA+QLFDEI LRNL PD G YNAL+SSLIRS DVK A ALM++MEAKHI HD
Sbjct: 304 AGVARNPIKAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDVKSAVALMDEMEAKHIEHD 363

Query: 361 SLTYHMMFSGLMRLEDVGGFYELYSKMVRRNFVPKTRTVIMIMKFFCENRRVDLGLELWG 420
           ++TYH MFS LMR  D+ G   LY KMV R+FVPKTRTV+M+MK+FC N+++DLGL LW 
Sbjct: 364 NMTYHTMFSCLMRTSDIDGVSRLYHKMVDRSFVPKTRTVVMLMKYFCVNQQLDLGLHLWR 423

Query: 421 YLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMKRSLLQAH 480
           YLVEKG CPH H LDLL+TGLC+R  V++AFECSKQMLERGR MSE A  I++  L+QA 
Sbjct: 424 YLVEKGCCPHGHALDLLLTGLCSRSRVIEAFECSKQMLERGRDMSEPALRILESFLVQAG 483

Query: 481 ATDNYGELEQLRKKLKTVLPP 502
             D   +L+Q+ ++L T+LPP
Sbjct: 484 EMDKLRKLKQMIQRLHTLLPP 501

The following BLAST results are available for this feature:
BLAST of Lsi09G005860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP291_ARATH1.1e-15858.25Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN... [more]
PPR5_ARATH4.6e-5931.94Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
PP112_ARATH3.3e-4125.95Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
PP129_ARATH6.3e-4025.17Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
PP125_ARATH1.0e-3425.12Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
BLAST of Lsi09G005860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRS8_CUCSA5.1e-25488.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173440 PE=4 SV=1[more]
A5AKR5_VITVI7.4e-18966.20Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012424 PE=4 SV=1[more]
D7SS92_VITVI7.4e-18966.20Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0117g00160 PE=4 SV=... [more]
M5X718_PRUPE5.3e-18765.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003671mg PE=4 SV=1[more]
W9T0E2_9ROSA7.7e-18668.52Uncharacterized protein OS=Morus notabilis GN=L484_022712 PE=4 SV=1[more]
BLAST of Lsi09G005860 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61360.16.5e-16058.25 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02420.12.6e-6031.94 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G71060.11.9e-4225.95 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G77360.13.6e-4125.17 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74900.11.3e-3525.12 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi09G005860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073036|ref|XP_008467224.1|4.0e-26089.06PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo][more]
gi|449451922|ref|XP_004143709.1|7.2e-25488.62PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativu... [more]
gi|147789025|emb|CAN75780.1|1.1e-18866.20hypothetical protein VITISV_012424 [Vitis vinifera][more]
gi|225460540|ref|XP_002272860.1|1.1e-18866.20PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Vitis vinifera... [more]
gi|645250925|ref|XP_008231442.1|5.3e-18865.67PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G005860.1Lsi09G005860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..214
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 324..372
score: 2.1E-8coord: 219..268
score: 9.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 190..216
score: 1.3E-4coord: 363..394
score: 6.1E-4coord: 257..290
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 186..216
score: 8.528coord: 360..394
score: 9.46coord: 395..429
score: 8.089coord: 255..289
score: 11.674coord: 290..324
score: 7.191coord: 220..254
score: 9.054coord: 325..359
score: 8.243coord: 430..464
score: 7.333coord: 112..142
score: 5.152coord: 148..178
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 2..16
score: 1.2E-280coord: 51..506
score: 1.2E
NoneNo IPR availablePANTHERPTHR24015:SF535SUBFAMILY NOT NAMEDcoord: 51..506
score: 1.2E-280coord: 2..16
score: 1.2E