Csa5G173440 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G173440
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat)
LocationChr5 : 7114241 .. 7115946 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTCTGATGAAGCTTACTCTAATCCCTCAAAAACCCATTTCTTCTCATTCGTTTCTGATTCTTGCAGCTTCTTATTGTACTAATCTTCATCCATCTTCAAAATCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCAACCTCTTCACCCCACTCTTCTTCACCTCATTCCATCTCCTCTTCCTTCAAACACTTTTCTCAACGACGTCCTTGGCCAACTCTTTGCAGCTCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAAGCTCCCCCAACTTCTGACGCTTTCGAGAAGACCCTTCACATTCTCTCCAGAATGAGATATTTCGATCAATCATGGGAGTTAATGCGTGAGATTCGACAAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAGGATTGCGAAGTTTCTATCATTTGAAGAAACCATTGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGTACTCAGAGACAAATGAAAGAGGCGCGATCAGTGTTCCACAAGATGTATTCTCGATTTCCCCCAAATATTAAAACCATAAATCTCTTGCTTTTAGGGTTTAAGGAATCGAGTGATATTACTTCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAAGGGTTGTTTCGTGGATGGTTTGAGAGTTTTTAAAGAAATGGAGAGGGCAAAATGTGAGCCAACATTGGAAACAATCACTACTCTTATCCACGGAGCAGGGATAGTCAAGGATAAAACCAAAGCTCGCCAACTGTTTGATGAAATTCCTCTGAGAAATTTGTGTCCTGATATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGGTGATGTAAAGTCTGCAGCATCTGTAATGGAAGATATGGAGGCTAAACACATTGAACATGACAGTGTGACCTACCACATGATGTTCTCAGGCTTGATTCGATTGGAAGATGTTGGAGGTTTTTATGAGTTGTATATCAAAATGGTAGGGCGAAATTTTGTGCCCAAAACACGAACGGCAGTGATGATAATGAAGTTTTTCTGCGAAAATCGTCGAGTTGATTTGGGTTTGGGTTTCTGGGCTTATTTGGTAGAGAAGGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAATGCTCTAAACAAATGTTGGAGAGAGGGAGACAGATGAGTGAAGCAGCATTTCTGATAATGGAGAGATGTCTTTTGAAGGCACATGCAACAGACAAATATGAGGAGCTTGAACGGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCCACTAAATCTGCTCTTATCTGATTCCAGCATCATAGACAAATAGTAAGTTTGGAATCAATTTTGACATGATGAAAGTTTAGAAAACTAAAACTCTAATTATTGAAAGAGGTATACACTTTAATATTGTATGTTTGAAAATCTACATGTACAATTGCTCCCTAGCCGACAAAGATATAGGTTTGAAAAACATTTCTAATTGCTCTCATTGACTT

mRNA sequence

ATGGCGGTTCTGATGAAGCTTACTCTAATCCCTCAAAAACCCATTTCTTCTCATTCGTTTCTGATTCTTGCAGCTTCTTATTGTACTAATCTTCATCCATCTTCAAAATCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCAACCTCTTCACCCCACTCTTCTTCACCTCATTCCATCTCCTCTTCCTTCAAACACTTTTCTCAACGACGTCCTTGGCCAACTCTTTGCAGCTCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAAGCTCCCCCAACTTCTGACGCTTTCGAGAAGACCCTTCACATTCTCTCCAGAATGAGATATTTCGATCAATCATGGGAGTTAATGCGTGAGATTCGACAAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAGGATTGCGAAGTTTCTATCATTTGAAGAAACCATTGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGTACTCAGAGACAAATGAAAGAGGCGCGATCAGTGTTCCACAAGATGTATTCTCGATTTCCCCCAAATATTAAAACCATAAATCTCTTGCTTTTAGGGTTTAAGGAATCGAGTGATATTACTTCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAAGGGTTGTTTCGTGGATGGTTTGAGAGTTTTTAAAGAAATGGAGAGGGCAAAATGTGAGCCAACATTGGAAACAATCACTACTCTTATCCACGGAGCAGGGATAGTCAAGGATAAAACCAAAGCTCGCCAACTGTTTGATGAAATTCCTCTGAGAAATTTGTGTCCTGATATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGGTGATGTAAAGTCTGCAGCATCTGTAATGGAAGATATGGAGGCTAAACACATTGAACATGACAGTGTGACCTACCACATGATGTTCTCAGGCTTGATTCGATTGGAAGATGTTGGAGGTTTTTATGAGTTGTATATCAAAATGGTAGGGCGAAATTTTGTGCCCAAAACACGAACGGCAGTGATGATAATGAAGTTTTTCTGCGAAAATCGTCGAGTTGATTTGGGTTTGGGTTTCTGGGCTTATTTGGTAGAGAAGGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAATGCTCTAAACAAATGTTGGAGAGAGGGAGACAGATGAGTGAAGCAGCATTTCTGATAATGGAGAGATGTCTTTTGAAGGCACATGCAACAGACAAATATGAGGAGCTTGAACGGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCCACTAAATCTGCTCTTATCTGA

Coding sequence (CDS)

ATGGCGGTTCTGATGAAGCTTACTCTAATCCCTCAAAAACCCATTTCTTCTCATTCGTTTCTGATTCTTGCAGCTTCTTATTGTACTAATCTTCATCCATCTTCAAAATCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCAACCTCTTCACCCCACTCTTCTTCACCTCATTCCATCTCCTCTTCCTTCAAACACTTTTCTCAACGACGTCCTTGGCCAACTCTTTGCAGCTCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAAGCTCCCCCAACTTCTGACGCTTTCGAGAAGACCCTTCACATTCTCTCCAGAATGAGATATTTCGATCAATCATGGGAGTTAATGCGTGAGATTCGACAAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAGGATTGCGAAGTTTCTATCATTTGAAGAAACCATTGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGTACTCAGAGACAAATGAAAGAGGCGCGATCAGTGTTCCACAAGATGTATTCTCGATTTCCCCCAAATATTAAAACCATAAATCTCTTGCTTTTAGGGTTTAAGGAATCGAGTGATATTACTTCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAAGGGTTGTTTCGTGGATGGTTTGAGAGTTTTTAAAGAAATGGAGAGGGCAAAATGTGAGCCAACATTGGAAACAATCACTACTCTTATCCACGGAGCAGGGATAGTCAAGGATAAAACCAAAGCTCGCCAACTGTTTGATGAAATTCCTCTGAGAAATTTGTGTCCTGATATTGGGGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGGTGATGTAAAGTCTGCAGCATCTGTAATGGAAGATATGGAGGCTAAACACATTGAACATGACAGTGTGACCTACCACATGATGTTCTCAGGCTTGATTCGATTGGAAGATGTTGGAGGTTTTTATGAGTTGTATATCAAAATGGTAGGGCGAAATTTTGTGCCCAAAACACGAACGGCAGTGATGATAATGAAGTTTTTCTGCGAAAATCGTCGAGTTGATTTGGGTTTGGGTTTCTGGGCTTATTTGGTAGAGAAGGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAATGCTCTAAACAAATGTTGGAGAGAGGGAGACAGATGAGTGAAGCAGCATTTCTGATAATGGAGAGATGTCTTTTGAAGGCACATGCAACAGACAAATATGAGGAGCTTGAACGGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCCACTAAATCTGCTCTTATCTGA

Protein sequence

MAVLMKLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLRKKLKTVLPPTKSALI*
Homology
[Close]
BLAST of Csa5G173440 vs. Swiss-Prot
Match: PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 1.4e-156
Identity = 282/495 (56.97%), Postives = 365/495 (73.74%), Query Frame = 1 

Query: 15  ISSHSFLILAA---SYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLP 74
           ISS S+  L A   S  ++L  +S + TEIERI  IIN HPFP+ P+ P L   IP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWE 134
           S  F+++VLG+LFAAHSNGLKALEFFK+ L  S++ PTSD+FEKTLHIL+RMRYFDQ+W 
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124

Query: 135 LMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLL 194
           LM E+R+ +P LL+ KSMSILL +IAKF S+EET+EAF +ME E+F  +KFG +EFN+LL
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILL 184

Query: 195 RAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKP 254
           RAFCT+R+MKEARS+F K++SRF P++KT+N+LLLGFKE+ D+T+ ELFYHEM+KRGFKP
Sbjct: 185 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 244

Query: 255 NAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLF 314
           N+VTY IRID +CKK  F + LR+F++M+R   + T++ +TTLIHG+G+ ++K KARQLF
Sbjct: 245 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 304

Query: 315 DEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRL 374
           DEI  R L PD GAYNAL+SSL++ GDV  A  VM++ME K IE DSVT+H MF G+++ 
Sbjct: 305 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 364

Query: 375 EDVG--GFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSH 434
           ++ G  G  E Y KM  R+ VPKT T VM+MK FC N  V+LGL  W Y++EKGYCPH H
Sbjct: 365 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 424

Query: 435 VLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLR 494
            L+LL T LCAR     AFECS Q +ERGR +SE  + ++E  L   +   K EEL+   
Sbjct: 425 ALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEEI 484

Query: 495 KKLKTVLPPTKSALI 505
           +KL + LPP +  L+
Sbjct: 485 QKLHSFLPPPEIQLM 498

[Close]
BLAST of Csa5G173440 vs. Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-62
Identity = 147/491 (29.94%), Postives = 262/491 (53.36%), Query Frame = 1 

Query: 13  KPISSH--SFLILAASYCTNLH------PSSKSTTEIERIAKIINDHPFP---DQPLHPT 72
           KP+SSH  S   L+ S+  ++       P  +   + E + ++IN         + L  +
Sbjct: 6   KPLSSHHVSNFRLSVSFLHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSS 65

Query: 73  LLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILS 132
            +HL      S   ++ VL ++  +H N ++ LEF+++         +S + +  L+IL 
Sbjct: 66  GIHL------SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILG 125

Query: 133 RMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRK 192
           R R FDQ WEL+ E ++    L++ ++M ++L R+AK  S  +T+E+F + +    V   
Sbjct: 126 RNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDF 185

Query: 193 FGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFY 252
           F T  FN LLR  C ++ M +AR+V+H +  +F P+++T N+LL G+K S +    E F+
Sbjct: 186 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFF 245

Query: 253 HEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIV 312
            EM  +G KP+ VTY+  ID YCK        ++  +M   +  P + T TT+I G G++
Sbjct: 246 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 305

Query: 313 KDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTY 372
               KAR++  E+      PD+ AYNA I +   +  +  A  ++++M  K +  ++ TY
Sbjct: 306 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 365

Query: 373 HMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVE 432
           ++ F  L    D+G  +ELY++M+G   +P T++ + ++K F  + +VD+ +  W  +V 
Sbjct: 366 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 425

Query: 433 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDK 492
           KG+  +S V D+L+  LC    V +A +C  +M+E+G + S  +F   +R  L     +K
Sbjct: 426 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF---KRIKLLMELANK 482

[Close]
BLAST of Csa5G173440 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-33
Identity = 103/370 (27.84%), Postives = 169/370 (45.68%), Query Frame = 1 

Query: 122 RMRYFDQSWELMREIRQT--HPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVG 181
           R    D+ W+L+  +++    P      S+  LL RI K    EE   AF  M  +   G
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE---AFSEMIRQ---G 352

Query: 182 RKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVE 241
               T  +  L+  FC +  ++ A   F++M+SR   P++ T   ++ GF +  D+    
Sbjct: 353 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 412

Query: 242 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGA 301
             +HEM  +G +P++VT++  I+ YCK G   D  RV   M +A C P + T TTLI G 
Sbjct: 413 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 472

Query: 302 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDS 361
               D   A +L  E+    L P+I  YN++++ L +SG+++ A  ++ + EA  +  D+
Sbjct: 473 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 532

Query: 362 VTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAY 421
           VTY  +     +  ++    E+  +M+G+   P   T  ++M  FC +  ++ G     +
Sbjct: 533 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 592

Query: 422 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERG------------------RQ 471
           ++ KG  P++   + LV   C R  +  A    K M  RG                  R 
Sbjct: 593 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 652


HSP 2 Score: 103.2 bits (256), Expect = 8.4e-21
Identity = 85/375 (22.67%), Postives = 159/375 (42.40%), Query Frame = 1 

Query: 132 LMREIRQT------HPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 191
           L+RE R+       +  +L++ S ++ L+R++K     +T  A         VG  +   
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK--DCYKTATAIIVFREFPEVGVCWNVA 249

Query: 192 EFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEM 251
            +N+++   C   ++KEA  +   M  + + P++ + + ++ G+    ++  V      M
Sbjct: 250 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 309

Query: 252 IKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDK 311
            ++G KPN+  Y   I   C+     +    F EM R    P     TTLI G     D 
Sbjct: 310 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 369

Query: 312 TKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMM 371
             A + F E+  R++ PD+  Y A+IS   + GD+  A  +  +M  K +E DSVT+  +
Sbjct: 370 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 429

Query: 372 FSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGY 431
            +G  +   +   + ++  M+     P   T   ++   C+   +D        + + G 
Sbjct: 430 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 489

Query: 432 CPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEE 491
            P+    + +V GLC  G + +A +   +    G       +  +     K+   DK +E
Sbjct: 490 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 549

Query: 492 LERLRKKLKTVLPPT 500
           +  L++ L   L PT
Sbjct: 550 I--LKEMLGKGLQPT 560

[Close]
BLAST of Csa5G173440 vs. Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-27
Identity = 92/358 (25.70%), Postives = 161/358 (44.97%), Query Frame = 1 

Query: 99  FCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAK 158
           FC         SD + + L    R    D S +L   + Q  P L ++   S LLS I+K
Sbjct: 36  FCFSRRAYSNGSD-YREMLRNGIRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISK 95

Query: 159 FLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPN 218
              ++  I  +++M+    +G        N+LL  FC   Q+  A S   KM      P+
Sbjct: 96  MKKYDVVIYLWEQMQ---MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPS 155

Query: 219 IKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFK 278
           I T   LL GF     +      + +M+  G+KPN V Y+  ID  CK     + L +  
Sbjct: 156 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 215

Query: 279 EMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSG 338
            ME+    P + T  +LI G       + A ++   +  R + PD+  +NALI + ++ G
Sbjct: 216 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 275

Query: 339 DVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAV 398
            V  A    E+M  + ++ D VTY ++  GL     +    E++  MV +   P   T  
Sbjct: 276 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 335

Query: 399 MIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQML 456
           +++  +C++++V+ G+  +  + ++G   ++    +L+ G C  G +  A E  ++M+
Sbjct: 336 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388


HSP 2 Score: 97.1 bits (240), Expect = 6.0e-19
Identity = 80/389 (20.57%), Postives = 159/389 (40.87%), Query Frame = 1 

Query: 93  ALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFD---QSWELMREIRQTHP-------- 152
           +L+ F   +     P  +D F + L  +S+M+ +D     WE M+ +   H         
Sbjct: 65  SLDLFFHMVQCRPLPSIAD-FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 124

Query: 153 -FLLTLKSMSILLSRIAKFLSF-------------------EETIEAFQRMENEVFVGRK 212
                   +S+ LS + K +                     +   +A    +  V +G K
Sbjct: 125 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 184

Query: 213 FGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELF 272
                +N ++   C  +Q+  A  + ++M      P++ T N L+ G   S   +     
Sbjct: 185 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 244

Query: 273 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI 332
              M KR   P+  T++  IDA  K+G   +    ++EM R   +P + T + LI+G  +
Sbjct: 245 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 304

Query: 333 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT 392
                +A ++F  +  +   PD+  Y+ LI+   +S  V+    +  +M  + +  ++VT
Sbjct: 305 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 364

Query: 393 YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV 450
           Y ++  G  R   +    E++ +MV     P   T  +++   C+N +++  L   A + 
Sbjct: 365 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 424


HSP 3 Score: 58.5 bits (140), Expect = 2.4e-07
Identity = 44/174 (25.29%), Postives = 76/174 (43.68%), Query Frame = 1 

Query: 150 SILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHK 209
           SIL++   K    E  ++ F  M     V     T  + +L++ +C   ++  A  +F +
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRN---TVTYTILIQGYCRAGKLNVAEEIFRR 389

Query: 210 M-YSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGC 269
           M +    PNI T N+LL G  ++  I    +   +M K G   + VTY+I I   CK G 
Sbjct: 390 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 449

Query: 270 FVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPD 323
             D   ++  +      P + T TT++ G      + +A  LF ++    + P+
Sbjct: 450 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500

[Close]
BLAST of Csa5G173440 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 6.0e-27
Identity = 82/329 (24.92%), Postives = 150/329 (45.59%), Query Frame = 1 

Query: 150 SILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHK 209
           SI++  + K  SF++ +  F  ME +   G K     ++ L+   C   +  +   +  +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMK---GIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 308

Query: 210 MYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGC 269
           M  R   P++ T + L+  F +   +   +  Y+EMI RG  P+ +TY+  ID +CK+ C
Sbjct: 309 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 368

Query: 270 FVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNA 329
             +  ++F  M    CEP + T + LI+     K      +LF EI  + L P+   YN 
Sbjct: 369 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 428

Query: 330 LISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRN 389
           L+    +SG + +A  + ++M ++ +    VTY ++  GL    ++    E++ KM    
Sbjct: 429 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 488

Query: 390 FVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAF 449
                    +I+   C   +VD     +  L +KG  P     ++++ GLC +G + +A 
Sbjct: 489 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 548

Query: 450 ECSKQMLERGRQMSEAAFLIMERCLLKAH 478
              ++M E G    +  + I    L++AH
Sbjct: 549 MLFRKMKEDGCTPDDFTYNI----LIRAH 570


HSP 2 Score: 111.7 bits (278), Expect = 2.4e-23
Identity = 76/310 (24.52%), Postives = 143/310 (46.13%), Query Frame = 1 

Query: 188 NVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEMIK 247
           + L+   C + ++ EA  +  +M    F P+  T   +L    +S +       + +M +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238

Query: 248 RGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTK 307
           R  K + V YSI ID+ CK G F D L +F EME    +  + T ++LI G         
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298

Query: 308 ARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFS 367
             ++  E+  RN+ PD+  ++ALI   ++ G +  A  +  +M  + I  D++TY+ +  
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358

Query: 368 GLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCP 427
           G  +   +    +++  MV +   P   T  +++  +C+ +RVD G+  +  +  KG  P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418

Query: 428 HSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAF-LIMERCLLKAHATDKYEEL 487
           ++   + LV G C  G +  A E  ++M+ RG   S   + ++++            E  
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

Query: 488 ERLRKKLKTV 496
           E+++K   T+
Sbjct: 479 EKMQKSRMTL 488


HSP 3 Score: 94.4 bits (233), Expect = 3.9e-18
Identity = 58/242 (23.97%), Postives = 109/242 (45.04%), Query Frame = 1 

Query: 167 EAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLL 226
           EA Q  +  V  G +     +++L+ ++C  +++ +   +F ++ S+   PN  T N L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427

Query: 227 LGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCE 286
           LGF +S  + + +  + EM+ RG  P+ VTY I +D  C  G     L +F++M++++  
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487

Query: 287 PTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASV 346
             +     +IHG         A  LF  +  + + PD+  YN +I  L + G +  A  +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547

Query: 347 MEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCE 406
              M+      D  TY+++    +    +    EL  +M    F   + T  M++    +
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607

Query: 407 NR 408
            R
Sbjct: 608 RR 609


HSP 4 Score: 92.4 bits (228), Expect = 1.5e-17
Identity = 80/371 (21.56%), Postives = 161/371 (43.40%), Query Frame = 1 

Query: 93  ALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMR--EIRQTHPFLLTLKSMS 152
           A++ F+  +  S+  PT   F +    ++R + +D      +  E+      + T+  M 
Sbjct: 54  AIDLFESMIQ-SRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 113

Query: 153 ILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKM 212
               R  K L       AF  +     +G +  T  F+ L+  FC + ++ EA ++  +M
Sbjct: 114 NCYCRKKKLLF------AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 173

Query: 213 YS-RFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCF 272
              +  P++ T++ L+ G      ++   +    M++ GF+P+ VTY   ++  CK G  
Sbjct: 174 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 233

Query: 273 VDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT--KARQLFDEIPLRNLCPDIGAYN 332
              L +F++ME    + ++   + +I    + KD +   A  LF+E+ ++ +  D+  Y+
Sbjct: 234 ALALDLFRKMEERNIKASVVQYSIVID--SLCKDGSFDDALSLFNEMEMKGIKADVVTYS 293

Query: 333 ALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGR 392
           +LI  L   G     A ++ +M  ++I  D VT+  +    ++   +    ELY +M+ R
Sbjct: 294 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 353

Query: 393 NFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQA 452
              P T T   ++  FC+   +      +  +V KG  P      +L+   C    V   
Sbjct: 354 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 413

Query: 453 FECSKQMLERG 459
               +++  +G
Sbjct: 414 MRLFREISSKG 415

[Close]
BLAST of Csa5G173440 vs. TrEMBL
Match: D7SS92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0117g00160 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 3.4e-186
Identity = 322/495 (65.05%), Postives = 397/495 (80.20%), Query Frame = 1 

Query: 10  IPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSP 69
           IPQK      FL +A       HPS +  +EI+R+ +IINDHPFPD PLH TL+  +P  
Sbjct: 15  IPQKLTL---FLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTLIQHVPKH 74

Query: 70  LPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQS 129
           L SNTF+ +VLG+LFAAHSNG KA EFFKF L HS+  P+SDAFEKTLHIL+RMRYFD++
Sbjct: 75  LLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKA 134

Query: 130 WELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNV 189
           WELM EI+QTHP LLTLKSMSI+LSRIAKF S+E+T+EAF RME  VF GR+FG  EFNV
Sbjct: 135 WELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNV 194

Query: 190 LLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGF 249
           LLRAFCTQRQMKEARSVFHKM+SRF PN KT+N+LLLGFKES D+T+VELFYHEMI+RGF
Sbjct: 195 LLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGF 254

Query: 250 KPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQ 309
           KPN+VTY+IRIDAYCKKGCF DGLR+ +EME+A C PTLETITTLIHGAG+ ++ ++AR+
Sbjct: 255 KPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARE 314

Query: 310 LFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLI 369
           LF+EI +RNL PDIG YNA +SSLIRS +V+SA  +M++ME + I HDS+TYH MF GL+
Sbjct: 315 LFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLM 374

Query: 370 RLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSH 429
           R   + G  ELY KM+ RNFVPKTRT VM+MK+FC+N+++DL L  W YL+++GYCPH H
Sbjct: 375 RSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGH 434

Query: 430 VLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLR 489
            LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F ++ER L++A   +   +L+++ 
Sbjct: 435 ALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMI 494

Query: 490 KKLKTVLPPTKSALI 505
           KKL TVLPP++   I
Sbjct: 495 KKLHTVLPPSRGHAI 506

[Close]
BLAST of Csa5G173440 vs. TrEMBL
Match: A5AKR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012424 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 3.4e-186
Identity = 322/495 (65.05%), Postives = 397/495 (80.20%), Query Frame = 1 

Query: 10  IPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSP 69
           IPQK      FL +A       HPS +  +EI+R+ +IINDHPFPD PLH TL+  +P  
Sbjct: 15  IPQKLTL---FLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTLIQHVPKH 74

Query: 70  LPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQS 129
           L SNTF+ +VLG+LFAAHSNG KA EFFKF L HS+  P+SDAFEKTLHIL+RMRYFD++
Sbjct: 75  LLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKA 134

Query: 130 WELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNV 189
           WELM EI+QTHP LLTLKSMSI+LSRIAKF S+E+T+EAF RME  VF GR+FG  EFNV
Sbjct: 135 WELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNV 194

Query: 190 LLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGF 249
           LLRAFCTQRQMKEARSVFHKM+SRF PN KT+N+LLLGFKES D+T+VELFYHEMI+RGF
Sbjct: 195 LLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGF 254

Query: 250 KPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQ 309
           KPN+VTY+IRIDAYCKKGCF DGLR+ +EME+A C PTLETITTLIHGAG+ ++ ++AR+
Sbjct: 255 KPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARE 314

Query: 310 LFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLI 369
           LF+EI +RNL PDIG YNA +SSLIRS +V+SA  +M++ME + I HDS+TYH MF GL+
Sbjct: 315 LFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLM 374

Query: 370 RLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSH 429
           R   + G  ELY KM+ RNFVPKTRT VM+MK+FC+N+++DL L  W YL+++GYCPH H
Sbjct: 375 RSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGH 434

Query: 430 VLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLR 489
            LDLLVTGLC+ G V +A EC+KQ LERGR MSE  F ++ER L++A   +   +L+++ 
Sbjct: 435 ALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMI 494

Query: 490 KKLKTVLPPTKSALI 505
           KKL TVLPP++   I
Sbjct: 495 KKLHTVLPPSRGHAI 506

[Close]
BLAST of Csa5G173440 vs. TrEMBL
Match: M5X718_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003671mg PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 4.4e-186
Identity = 324/495 (65.45%), Postives = 398/495 (80.40%), Query Frame = 1 

Query: 6   KLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHL 65
           +LT IP K   S   +I A    +   PSS++  E++RI +IIN+HP+PDQPL PTLL  
Sbjct: 9   QLTQIPPKLNFS---VIHALKISSQFLPSSETNIEVDRITRIINNHPYPDQPLLPTLLQH 68

Query: 66  IPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRY 125
           IP    S +F+ +VLG LFAAHSNGLKALEFF + LHHSQ  P+SDAFEKTLHIL+RMRY
Sbjct: 69  IPPHALSTSFVENVLGYLFAAHSNGLKALEFFNYSLHHSQLCPSSDAFEKTLHILARMRY 128

Query: 126 FDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185
           FD++W+LM +I   HP LLTLKSMSI+LS+IAKF S+E+ +EAF +MEN++FVGRKFGTE
Sbjct: 129 FDKAWDLMEKISSMHPSLLTLKSMSIMLSKIAKFQSYEDVLEAFGKMENDIFVGRKFGTE 188

Query: 186 EFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMI 245
           EFNVLLRAFCT+RQMKEARSVF KM+ RF PN KT+N+LLLGFKES DIT+VELFYHE++
Sbjct: 189 EFNVLLRAFCTERQMKEARSVFLKMHFRFSPNTKTMNILLLGFKESGDITAVELFYHELV 248

Query: 246 KRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT 305
           KRGF+PN +TY+IRIDAYCKKGCF DGLR+F+ MER    PTLETITTLIHGAG+ ++  
Sbjct: 249 KRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHGAGVARNPI 308

Query: 306 KARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMF 365
           KA+QLFDEI LRNL PD G YNAL+SSLIRS DVKSA ++M++ME KHIEHD++TYH MF
Sbjct: 309 KAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDVKSAVALMDEMEVKHIEHDNMTYHTMF 368

Query: 366 SGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYC 425
           S L+R  D+ G   LY KMV R+FVPKTRT VM+MK+FC N+++DLGL  W YLVEKG C
Sbjct: 369 SCLMRTSDIDGVSGLYHKMVDRSFVPKTRTVVMLMKYFCVNQQLDLGLHLWRYLVEKGCC 428

Query: 426 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEEL 485
           PH H LDLL+TGLC+R  V++AFECSKQMLERGR MSE A  I+E  L++A   DK  +L
Sbjct: 429 PHGHALDLLLTGLCSRSRVIEAFECSKQMLERGRDMSEPALRILESFLVRAGEMDKLRKL 488

Query: 486 ERLRKKLKTVLPPTK 501
           +++ ++L T+LPP +
Sbjct: 489 KQMIQRLHTLLPPLR 500

[Close]
BLAST of Csa5G173440 vs. TrEMBL
Match: A0A061GGT7_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_027716 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.1e-183
Identity = 317/508 (62.40%), Postives = 406/508 (79.92%), Query Frame = 1 

Query: 1   MAVLMKL---TLIPQKPISSHSFLILAASYCTNLHP-SSKSTTEIERIAKIINDHPFPDQ 60
           M +L+K+   + + Q P ++ S  +  AS  ++  P SS+  TEIERI +IINDHPFPD+
Sbjct: 1   MLLLLKMKGSSQLIQIPKANLSLFLSVASKSSSSSPLSSEIKTEIERITRIINDHPFPDE 60

Query: 61  PLHPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKT 120
           PL PTLL  IP    S +F+  VLG+LFAAHSNGLKALEFFK+ +H+SQ  P+ DAFEKT
Sbjct: 61  PLQPTLLQQIPRIALSVSFVESVLGRLFAAHSNGLKALEFFKYSVHYSQLTPSVDAFEKT 120

Query: 121 LHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEV 180
           LHIL+RMRYFD++WELM E+  THP+LLTLKSMSI+L++IAKF S+E+T++AF+RME +V
Sbjct: 121 LHILTRMRYFDKAWELMIEMGHTHPYLLTLKSMSIMLAKIAKFQSYEDTLKAFKRMETDV 180

Query: 181 FVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITS 240
           FVGR F T+EFNVLLRAFC+QR+MKEARSVF KM+SRF P+ KT+N+LLLGFKES ++ +
Sbjct: 181 FVGRNFSTDEFNVLLRAFCSQREMKEARSVFQKMHSRFSPDTKTMNILLLGFKESGNVAA 240

Query: 241 VELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIH 300
           +ELF+H+M++RGFKPN++TY+IRIDAYCKKGC  DGLR+ +EME+  C PTLETITTLIH
Sbjct: 241 MELFFHDMVRRGFKPNSMTYNIRIDAYCKKGCLGDGLRLLEEMEQVHCLPTLETITTLIH 300

Query: 301 GAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEH 360
           GAG+ ++  KA+QLFDEIP RNL PD+GAYNALISSLIRS D+KSA  +M++ME K IEH
Sbjct: 301 GAGVARNMPKAKQLFDEIPKRNLQPDVGAYNALISSLIRSRDIKSAIELMDEMERKQIEH 360

Query: 361 DSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFW 420
           D +TYH MF G+++L  + G  ELY KM  RNF+PKT T VM+MK+FCEN+ +DLGL  W
Sbjct: 361 DGLTYHTMFLGMMKLSGIEGVCELYYKMTERNFIPKTPTVVMLMKYFCENQNLDLGLNLW 420

Query: 421 AYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKA 480
            YLVEKGYCPHSH LDLLVTGLC+RG + +AF C KQMLERGR MSE+ + +M+R L + 
Sbjct: 421 DYLVEKGYCPHSHALDLLVTGLCSRGRLPEAFVCCKQMLERGRHMSESVYRMMQRFLKQY 480

Query: 481 HATDKYEELERLRKKLKTVLPPTKSALI 505
              DK  +L+R+  KL++VLP ++   I
Sbjct: 481 DEMDKLMDLDRMIMKLQSVLPSSRGQAI 508

[Close]
BLAST of Csa5G173440 vs. TrEMBL
Match: W9T0E2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022712 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 3.6e-180
Identity = 315/490 (64.29%), Postives = 391/490 (79.80%), Query Frame = 1 

Query: 6   KLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHL 65
           +L  + QK  S+ + ++ + S+    +PSS++  EIERI +IINDHPFPDQPL PTLL  
Sbjct: 12  RLGRVTQKSTSTVNSVLRSFSH---RNPSSETKIEIERITRIINDHPFPDQPLQPTLLQH 71

Query: 66  IPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRY 125
           IP  + SNTF+ +VLG+LFAAHSNGLKALEFF+F L HSQ  P++DAFEKTLHIL RMRY
Sbjct: 72  IPLAVLSNTFVENVLGRLFAAHSNGLKALEFFEFSLRHSQFSPSADAFEKTLHILVRMRY 131

Query: 126 FDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185
           F+++WELM  I + HP  LTLKSMSI+LS+IAKF S+E+T+ AF++MEN+VFVG+KFGT+
Sbjct: 132 FEKAWELMATIGREHPCCLTLKSMSIMLSKIAKFQSYEDTLAAFEKMENDVFVGKKFGTD 191

Query: 186 EFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMI 245
           EFN+LLRAFCTQRQMKEARSVF KMYSRF P+ K++N+LL GFKES DIT+ ELFYHEM+
Sbjct: 192 EFNILLRAFCTQRQMKEARSVFRKMYSRFSPDKKSMNILLSGFKESGDITAAELFYHEMV 251

Query: 246 KRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT 305
            RGF+PN VTY+IRIDAYCK GC  DGLR+ +EME+A   PTLETITTLIHGAGI ++  
Sbjct: 252 ARGFRPNVVTYNIRIDAYCKAGCLGDGLRLLEEMEQANFSPTLETITTLIHGAGIARNLI 311

Query: 306 KARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMF 365
           K +QLF EIP RNL PD G YNAL+SSLIR  D+KSA ++M++ME KHI+HD +TYH+MF
Sbjct: 312 KVQQLFQEIPFRNLHPDTGVYNALMSSLIRCKDLKSAVALMDEMEEKHIDHDYMTYHIMF 371

Query: 366 SGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYC 425
           SG+I+  D  G   L+ KMV  NFVPKTRT VM+MKFFC N RVDLGL  W YL+ KGYC
Sbjct: 372 SGMIKKMDFEGVSHLFDKMVQNNFVPKTRTVVMLMKFFCANSRVDLGLYLWEYLMGKGYC 431

Query: 426 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEEL 485
           PH H L+LL+TGLC+RG V +AFECSKQ+LERGR +SEAAF ++ER LL+    D+  +L
Sbjct: 432 PHGHALELLLTGLCSRGFVKEAFECSKQVLERGRHLSEAAFRLIERRLLQEGEKDQLRKL 491

Query: 486 ERLRKKLKTV 496
            ++  KL T+
Sbjct: 492 NQMIDKLPTL 498

[Close]
BLAST of Csa5G173440 vs. TAIR10
Match: AT3G61360.1 (AT3G61360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 554.3 bits (1427), Expect = 7.8e-158
Identity = 282/495 (56.97%), Postives = 365/495 (73.74%), Query Frame = 1 

Query: 15  ISSHSFLILAA---SYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLP 74
           ISS S+  L A   S  ++L  +S + TEIERI  IIN HPFP+ P+ P L   IP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWE 134
           S  F+++VLG+LFAAHSNGLKALEFFK+ L  S++ PTSD+FEKTLHIL+RMRYFDQ+W 
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124

Query: 135 LMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLL 194
           LM E+R+ +P LL+ KSMSILL +IAKF S+EET+EAF +ME E+F  +KFG +EFN+LL
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILL 184

Query: 195 RAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKP 254
           RAFCT+R+MKEARS+F K++SRF P++KT+N+LLLGFKE+ D+T+ ELFYHEM+KRGFKP
Sbjct: 185 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 244

Query: 255 NAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLF 314
           N+VTY IRID +CKK  F + LR+F++M+R   + T++ +TTLIHG+G+ ++K KARQLF
Sbjct: 245 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 304

Query: 315 DEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRL 374
           DEI  R L PD GAYNAL+SSL++ GDV  A  VM++ME K IE DSVT+H MF G+++ 
Sbjct: 305 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 364

Query: 375 EDVG--GFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSH 434
           ++ G  G  E Y KM  R+ VPKT T VM+MK FC N  V+LGL  W Y++EKGYCPH H
Sbjct: 365 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 424

Query: 435 VLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLR 494
            L+LL T LCAR     AFECS Q +ERGR +SE  + ++E  L   +   K EEL+   
Sbjct: 425 ALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEEI 484

Query: 495 KKLKTVLPPTKSALI 505
           +KL + LPP +  L+
Sbjct: 485 QKLHSFLPPPEIQLM 498

[Close]
BLAST of Csa5G173440 vs. TAIR10
Match: AT1G02420.1 (AT1G02420.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-63
Identity = 147/491 (29.94%), Postives = 262/491 (53.36%), Query Frame = 1 

Query: 13  KPISSH--SFLILAASYCTNLH------PSSKSTTEIERIAKIINDHPFP---DQPLHPT 72
           KP+SSH  S   L+ S+  ++       P  +   + E + ++IN         + L  +
Sbjct: 6   KPLSSHHVSNFRLSVSFLHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSS 65

Query: 73  LLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILS 132
            +HL      S   ++ VL ++  +H N ++ LEF+++         +S + +  L+IL 
Sbjct: 66  GIHL------SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILG 125

Query: 133 RMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRK 192
           R R FDQ WEL+ E ++    L++ ++M ++L R+AK  S  +T+E+F + +    V   
Sbjct: 126 RNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDF 185

Query: 193 FGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFY 252
           F T  FN LLR  C ++ M +AR+V+H +  +F P+++T N+LL G+K S +    E F+
Sbjct: 186 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFF 245

Query: 253 HEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIV 312
            EM  +G KP+ VTY+  ID YCK        ++  +M   +  P + T TT+I G G++
Sbjct: 246 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 305

Query: 313 KDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTY 372
               KAR++  E+      PD+ AYNA I +   +  +  A  ++++M  K +  ++ TY
Sbjct: 306 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 365

Query: 373 HMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVE 432
           ++ F  L    D+G  +ELY++M+G   +P T++ + ++K F  + +VD+ +  W  +V 
Sbjct: 366 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 425

Query: 433 KGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDK 492
           KG+  +S V D+L+  LC    V +A +C  +M+E+G + S  +F   +R  L     +K
Sbjct: 426 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF---KRIKLLMELANK 482

[Close]
BLAST of Csa5G173440 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 6.4e-35
Identity = 103/370 (27.84%), Postives = 169/370 (45.68%), Query Frame = 1 

Query: 122 RMRYFDQSWELMREIRQT--HPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVG 181
           R    D+ W+L+  +++    P      S+  LL RI K    EE   AF  M  +   G
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE---AFSEMIRQ---G 352

Query: 182 RKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVE 241
               T  +  L+  FC +  ++ A   F++M+SR   P++ T   ++ GF +  D+    
Sbjct: 353 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 412

Query: 242 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGA 301
             +HEM  +G +P++VT++  I+ YCK G   D  RV   M +A C P + T TTLI G 
Sbjct: 413 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 472

Query: 302 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDS 361
               D   A +L  E+    L P+I  YN++++ L +SG+++ A  ++ + EA  +  D+
Sbjct: 473 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 532

Query: 362 VTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAY 421
           VTY  +     +  ++    E+  +M+G+   P   T  ++M  FC +  ++ G     +
Sbjct: 533 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 592

Query: 422 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERG------------------RQ 471
           ++ KG  P++   + LV   C R  +  A    K M  RG                  R 
Sbjct: 593 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 652


HSP 2 Score: 103.2 bits (256), Expect = 4.8e-22
Identity = 85/375 (22.67%), Postives = 159/375 (42.40%), Query Frame = 1 

Query: 132 LMREIRQT------HPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 191
           L+RE R+       +  +L++ S ++ L+R++K     +T  A         VG  +   
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK--DCYKTATAIIVFREFPEVGVCWNVA 249

Query: 192 EFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEM 251
            +N+++   C   ++KEA  +   M  + + P++ + + ++ G+    ++  V      M
Sbjct: 250 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 309

Query: 252 IKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDK 311
            ++G KPN+  Y   I   C+     +    F EM R    P     TTLI G     D 
Sbjct: 310 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 369

Query: 312 TKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMM 371
             A + F E+  R++ PD+  Y A+IS   + GD+  A  +  +M  K +E DSVT+  +
Sbjct: 370 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 429

Query: 372 FSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGY 431
            +G  +   +   + ++  M+     P   T   ++   C+   +D        + + G 
Sbjct: 430 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 489

Query: 432 CPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEE 491
            P+    + +V GLC  G + +A +   +    G       +  +     K+   DK +E
Sbjct: 490 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 549

Query: 492 LERLRKKLKTVLPPT 500
           +  L++ L   L PT
Sbjct: 550 I--LKEMLGKGLQPT 560

[Close]
BLAST of Csa5G173440 vs. TAIR10
Match: AT5G16640.1 (AT5G16640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-28
Identity = 92/358 (25.70%), Postives = 161/358 (44.97%), Query Frame = 1 

Query: 99  FCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAK 158
           FC         SD + + L    R    D S +L   + Q  P L ++   S LLS I+K
Sbjct: 36  FCFSRRAYSNGSD-YREMLRNGIRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISK 95

Query: 159 FLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPN 218
              ++  I  +++M+    +G        N+LL  FC   Q+  A S   KM      P+
Sbjct: 96  MKKYDVVIYLWEQMQ---MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPS 155

Query: 219 IKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFK 278
           I T   LL GF     +      + +M+  G+KPN V Y+  ID  CK     + L +  
Sbjct: 156 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 215

Query: 279 EMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSG 338
            ME+    P + T  +LI G       + A ++   +  R + PD+  +NALI + ++ G
Sbjct: 216 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 275

Query: 339 DVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAV 398
            V  A    E+M  + ++ D VTY ++  GL     +    E++  MV +   P   T  
Sbjct: 276 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 335

Query: 399 MIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQML 456
           +++  +C++++V+ G+  +  + ++G   ++    +L+ G C  G +  A E  ++M+
Sbjct: 336 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388


HSP 2 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 80/389 (20.57%), Postives = 159/389 (40.87%), Query Frame = 1 

Query: 93  ALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFD---QSWELMREIRQTHP-------- 152
           +L+ F   +     P  +D F + L  +S+M+ +D     WE M+ +   H         
Sbjct: 65  SLDLFFHMVQCRPLPSIAD-FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 124

Query: 153 -FLLTLKSMSILLSRIAKFLSF-------------------EETIEAFQRMENEVFVGRK 212
                   +S+ LS + K +                     +   +A    +  V +G K
Sbjct: 125 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 184

Query: 213 FGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELF 272
                +N ++   C  +Q+  A  + ++M      P++ T N L+ G   S   +     
Sbjct: 185 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 244

Query: 273 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI 332
              M KR   P+  T++  IDA  K+G   +    ++EM R   +P + T + LI+G  +
Sbjct: 245 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 304

Query: 333 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT 392
                +A ++F  +  +   PD+  Y+ LI+   +S  V+    +  +M  + +  ++VT
Sbjct: 305 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 364

Query: 393 YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV 450
           Y ++  G  R   +    E++ +MV     P   T  +++   C+N +++  L   A + 
Sbjct: 365 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 424


HSP 3 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 44/174 (25.29%), Postives = 76/174 (43.68%), Query Frame = 1 

Query: 150 SILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHK 209
           SIL++   K    E  ++ F  M     V     T  + +L++ +C   ++  A  +F +
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRN---TVTYTILIQGYCRAGKLNVAEEIFRR 389

Query: 210 M-YSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGC 269
           M +    PNI T N+LL G  ++  I    +   +M K G   + VTY+I I   CK G 
Sbjct: 390 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 449

Query: 270 FVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPD 323
             D   ++  +      P + T TT++ G      + +A  LF ++    + P+
Sbjct: 450 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500

[Close]
BLAST of Csa5G173440 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 3.4e-28
Identity = 82/329 (24.92%), Postives = 150/329 (45.59%), Query Frame = 1 

Query: 150 SILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHK 209
           SI++  + K  SF++ +  F  ME +   G K     ++ L+   C   +  +   +  +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMK---GIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 308

Query: 210 MYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGC 269
           M  R   P++ T + L+  F +   +   +  Y+EMI RG  P+ +TY+  ID +CK+ C
Sbjct: 309 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 368

Query: 270 FVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNA 329
             +  ++F  M    CEP + T + LI+     K      +LF EI  + L P+   YN 
Sbjct: 369 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 428

Query: 330 LISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRN 389
           L+    +SG + +A  + ++M ++ +    VTY ++  GL    ++    E++ KM    
Sbjct: 429 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 488

Query: 390 FVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAF 449
                    +I+   C   +VD     +  L +KG  P     ++++ GLC +G + +A 
Sbjct: 489 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 548

Query: 450 ECSKQMLERGRQMSEAAFLIMERCLLKAH 478
              ++M E G    +  + I    L++AH
Sbjct: 549 MLFRKMKEDGCTPDDFTYNI----LIRAH 570


HSP 2 Score: 111.7 bits (278), Expect = 1.3e-24
Identity = 76/310 (24.52%), Postives = 143/310 (46.13%), Query Frame = 1 

Query: 188 NVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDITSVELFYHEMIK 247
           + L+   C + ++ EA  +  +M    F P+  T   +L    +S +       + +M +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238

Query: 248 RGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTK 307
           R  K + V YSI ID+ CK G F D L +F EME    +  + T ++LI G         
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298

Query: 308 ARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFS 367
             ++  E+  RN+ PD+  ++ALI   ++ G +  A  +  +M  + I  D++TY+ +  
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358

Query: 368 GLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCP 427
           G  +   +    +++  MV +   P   T  +++  +C+ +RVD G+  +  +  KG  P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418

Query: 428 HSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAF-LIMERCLLKAHATDKYEEL 487
           ++   + LV G C  G +  A E  ++M+ RG   S   + ++++            E  
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

Query: 488 ERLRKKLKTV 496
           E+++K   T+
Sbjct: 479 EKMQKSRMTL 488


HSP 3 Score: 94.4 bits (233), Expect = 2.2e-19
Identity = 58/242 (23.97%), Postives = 109/242 (45.04%), Query Frame = 1 

Query: 167 EAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLL 226
           EA Q  +  V  G +     +++L+ ++C  +++ +   +F ++ S+   PN  T N L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427

Query: 227 LGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCE 286
           LGF +S  + + +  + EM+ RG  P+ VTY I +D  C  G     L +F++M++++  
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487

Query: 287 PTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASV 346
             +     +IHG         A  LF  +  + + PD+  YN +I  L + G +  A  +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547

Query: 347 MEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCE 406
              M+      D  TY+++    +    +    EL  +M    F   + T  M++    +
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607

Query: 407 NR 408
            R
Sbjct: 608 RR 609


HSP 4 Score: 92.4 bits (228), Expect = 8.4e-19
Identity = 80/371 (21.56%), Postives = 161/371 (43.40%), Query Frame = 1 

Query: 93  ALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMR--EIRQTHPFLLTLKSMS 152
           A++ F+  +  S+  PT   F +    ++R + +D      +  E+      + T+  M 
Sbjct: 54  AIDLFESMIQ-SRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 113

Query: 153 ILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKM 212
               R  K L       AF  +     +G +  T  F+ L+  FC + ++ EA ++  +M
Sbjct: 114 NCYCRKKKLLF------AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 173

Query: 213 YS-RFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCF 272
              +  P++ T++ L+ G      ++   +    M++ GF+P+ VTY   ++  CK G  
Sbjct: 174 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 233

Query: 273 VDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT--KARQLFDEIPLRNLCPDIGAYN 332
              L +F++ME    + ++   + +I    + KD +   A  LF+E+ ++ +  D+  Y+
Sbjct: 234 ALALDLFRKMEERNIKASVVQYSIVID--SLCKDGSFDDALSLFNEMEMKGIKADVVTYS 293

Query: 333 ALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGR 392
           +LI  L   G     A ++ +M  ++I  D VT+  +    ++   +    ELY +M+ R
Sbjct: 294 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 353

Query: 393 NFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQA 452
              P T T   ++  FC+   +      +  +V KG  P      +L+   C    V   
Sbjct: 354 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 413

Query: 453 FECSKQMLERG 459
               +++  +G
Sbjct: 414 MRLFREISSKG 415

[Close]
BLAST of Csa5G173440 vs. NCBI nr
Match: gi|449451922|ref|XP_004143709.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativus])

HSP 1 Score: 1010.7 bits (2612), Expect = 8.6e-292
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1 

Query: 1   MAVLMKLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHP 60
           MAVLMKLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHP
Sbjct: 1   MAVLMKLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHP 60

Query: 61  TLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHIL 120
           TLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHIL
Sbjct: 61  TLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHIL 120

Query: 121 SRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGR 180
           SRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGR
Sbjct: 121 SRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGR 180

Query: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF 240
           KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI 300
           YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI
Sbjct: 241 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI 300

Query: 301 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT 360
           VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT
Sbjct: 301 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT 360

Query: 361 YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV 420
           YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV
Sbjct: 361 YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATD 480
           EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATD
Sbjct: 421 EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATD 480

Query: 481 KYEELERLRKKLKTVLPPTKSALI 505
           KYEELERLRKKLKTVLPPTKSALI
Sbjct: 481 KYEELERLRKKLKTVLPPTKSALI 504

[Close]
BLAST of Csa5G173440 vs. NCBI nr
Match: gi|659073036|ref|XP_008467224.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo])

HSP 1 Score: 934.5 bits (2414), Expect = 7.9e-269
Identity = 471/503 (93.64%), Postives = 478/503 (95.03%), Query Frame = 1 

Query: 1   MAVLMKLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHP 60
           MA+LMKLT IPQKPISSHSFLI AASYCT+LH   KSTTEIERIAKIINDHPFPDQPLHP
Sbjct: 5   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH---KSTTEIERIAKIINDHPFPDQPLHP 64

Query: 61  TLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHIL 120
           TLLHLIPSPLPSNTFLNDVLG LFAAHSNGLKALEFFKFCLHHSQA PT DAFEKTLHIL
Sbjct: 65  TLLHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHIL 124

Query: 121 SRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGR 180
           +RMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKF SFEETIEAFQRMENEVFVGR
Sbjct: 125 ARMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFVGR 184

Query: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF 240
           KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF
Sbjct: 185 KFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELF 244

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGI 300
           YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAK EPTLETITTLIHGAGI
Sbjct: 245 YHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGAGI 304

Query: 301 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVT 360
           VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAA++MEDMEAKHI HDSVT
Sbjct: 305 VKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDSVT 364

Query: 361 YHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLV 420
           YHMMF GLIRLEDVGGF ELY KMV +NFVPKTRT V IMKFFCENRRVDL LGFWAYLV
Sbjct: 365 YHMMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWAYLV 424

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATD 480
           EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMER LLKA ATD
Sbjct: 425 EKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARATD 484

Query: 481 KYEELERLRKKLKTVLPPTKSAL 504
           KY ELE+LRKKLKTVLPP    L
Sbjct: 485 KYGELEQLRKKLKTVLPPPNQLL 504

[Close]
BLAST of Csa5G173440 vs. NCBI nr
Match: gi|645250925|ref|XP_008231442.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X1 [Prunus mume])

HSP 1 Score: 662.1 bits (1707), Expect = 7.5e-187
Identity = 325/495 (65.66%), Postives = 399/495 (80.61%), Query Frame = 1 

Query: 6   KLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHL 65
           +LT IP K   S   +I A    +   PSS++  E++RI +IIN+HP+PDQPL PTLL  
Sbjct: 12  QLTQIPPKLNFS---VIHAVKISSQFLPSSETNIEVDRITRIINNHPYPDQPLLPTLLQH 71

Query: 66  IPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRY 125
           IP    S +F+ +VLG LFAAHSNGLKALEFF + LHHSQ  P+SDAFEKTLHIL+RMRY
Sbjct: 72  IPPHALSTSFVENVLGYLFAAHSNGLKALEFFNYSLHHSQLCPSSDAFEKTLHILARMRY 131

Query: 126 FDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185
           FD++W+LM +I   HP LLTLKSMSI+LS+IAKF S+E+ +EAF +MEN++FVGRKFGTE
Sbjct: 132 FDKAWDLMEKISSMHPSLLTLKSMSIMLSKIAKFQSYEDVLEAFDKMENDIFVGRKFGTE 191

Query: 186 EFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMI 245
           EFNVLLRAFCT+RQMKEARSVF KM+ RF PN KT+N+LLLGFKES DIT+VELFYHE++
Sbjct: 192 EFNVLLRAFCTERQMKEARSVFLKMHFRFSPNTKTMNILLLGFKESGDITAVELFYHELV 251

Query: 246 KRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT 305
           KRGF+PN +TY+IRIDAYCKKGCF DGLR+F+ MER    PTLETITTLIHGAG+ ++  
Sbjct: 252 KRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHGAGVARNPI 311

Query: 306 KARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMF 365
           KA+QLFDEI LRNL PD G YNAL+SSLIRS DVKSA ++M++MEAKHIEHD++TYH MF
Sbjct: 312 KAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDVKSAVALMDEMEAKHIEHDNMTYHTMF 371

Query: 366 SGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYC 425
           S L+R  D+ G   LY KMV R+FVPKTRT VM+MK+FC N+++DLGL  W YLVEKG C
Sbjct: 372 SCLMRTSDIDGVSRLYHKMVDRSFVPKTRTVVMLMKYFCVNQQLDLGLHLWRYLVEKGCC 431

Query: 426 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEEL 485
           PH H LDLL+TGLC+R  V++AFECSKQMLERGR MSE A  I+E  L++A   DK  +L
Sbjct: 432 PHGHALDLLLTGLCSRSRVIEAFECSKQMLERGRDMSEPALRILESFLVQAGEMDKLRKL 491

Query: 486 ERLRKKLKTVLPPTK 501
           +++ ++L T+LPP +
Sbjct: 492 KQMIQRLHTLLPPLR 503

[Close]
BLAST of Csa5G173440 vs. NCBI nr
Match: gi|645250932|ref|XP_008231445.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X2 [Prunus mume])

HSP 1 Score: 662.1 bits (1707), Expect = 7.5e-187
Identity = 325/495 (65.66%), Postives = 399/495 (80.61%), Query Frame = 1 

Query: 6   KLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHL 65
           +LT IP K   S   +I A    +   PSS++  E++RI +IIN+HP+PDQPL PTLL  
Sbjct: 12  QLTQIPPKLNFS---VIHAVKISSQFLPSSETNIEVDRITRIINNHPYPDQPLLPTLLQH 71

Query: 66  IPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRY 125
           IP    S +F+ +VLG LFAAHSNGLKALEFF + LHHSQ  P+SDAFEKTLHIL+RMRY
Sbjct: 72  IPPHALSTSFVENVLGYLFAAHSNGLKALEFFNYSLHHSQLCPSSDAFEKTLHILARMRY 131

Query: 126 FDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185
           FD++W+LM +I   HP LLTLKSMSI+LS+IAKF S+E+ +EAF +MEN++FVGRKFGTE
Sbjct: 132 FDKAWDLMEKISSMHPSLLTLKSMSIMLSKIAKFQSYEDVLEAFDKMENDIFVGRKFGTE 191

Query: 186 EFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMI 245
           EFNVLLRAFCT+RQMKEARSVF KM+ RF PN KT+N+LLLGFKES DIT+VELFYHE++
Sbjct: 192 EFNVLLRAFCTERQMKEARSVFLKMHFRFSPNTKTMNILLLGFKESGDITAVELFYHELV 251

Query: 246 KRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT 305
           KRGF+PN +TY+IRIDAYCKKGCF DGLR+F+ MER    PTLETITTLIHGAG+ ++  
Sbjct: 252 KRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHGAGVARNPI 311

Query: 306 KARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMF 365
           KA+QLFDEI LRNL PD G YNAL+SSLIRS DVKSA ++M++MEAKHIEHD++TYH MF
Sbjct: 312 KAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDVKSAVALMDEMEAKHIEHDNMTYHTMF 371

Query: 366 SGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYC 425
           S L+R  D+ G   LY KMV R+FVPKTRT VM+MK+FC N+++DLGL  W YLVEKG C
Sbjct: 372 SCLMRTSDIDGVSRLYHKMVDRSFVPKTRTVVMLMKYFCVNQQLDLGLHLWRYLVEKGCC 431

Query: 426 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEEL 485
           PH H LDLL+TGLC+R  V++AFECSKQMLERGR MSE A  I+E  L++A   DK  +L
Sbjct: 432 PHGHALDLLLTGLCSRSRVIEAFECSKQMLERGRDMSEPALRILESFLVQAGEMDKLRKL 491

Query: 486 ERLRKKLKTVLPPTK 501
           +++ ++L T+LPP +
Sbjct: 492 KQMIQRLHTLLPPLR 503

[Close]
BLAST of Csa5G173440 vs. NCBI nr
Match: gi|694412735|ref|XP_009334670.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Pyrus x bretschneideri])

HSP 1 Score: 661.4 bits (1705), Expect = 1.3e-186
Identity = 327/499 (65.53%), Postives = 400/499 (80.16%), Query Frame = 1 

Query: 6   KLTLIPQKPISSHSFLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHL 65
           +LT IPQK   S   +I +    + + PSS+S+ EI+ I +IIN+HP+PDQPLHPTLL  
Sbjct: 12  QLTEIPQKLNFS---VINSLKLSSQILPSSESSIEIDTITRIINNHPYPDQPLHPTLLQH 71

Query: 66  IPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRY 125
           IP  + S +F+ +VLG LFAAHSNGLKALEFF + L HSQ  P+SDAFEK LHIL+RMRY
Sbjct: 72  IPPQVLSTSFVENVLGHLFAAHSNGLKALEFFNYSLSHSQLCPSSDAFEKMLHILTRMRY 131

Query: 126 FDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFVGRKFGTE 185
           FD++WELM +I +THP LLTLKSMSI+LS+IAKF S+E+ +EAF+++EN++F GRKFGT+
Sbjct: 132 FDKAWELMAKISRTHPSLLTLKSMSIILSKIAKFKSYEDVLEAFEKLENDIFAGRKFGTD 191

Query: 186 EFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMI 245
           EFNVLLRAFCT+RQMKEARSVF KM SRFPPN KT+N+LLLGFKES DIT++ELFYHE++
Sbjct: 192 EFNVLLRAFCTERQMKEARSVFMKMCSRFPPNTKTMNILLLGFKESGDITAIELFYHELV 251

Query: 246 KRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKT 305
           KR FKPN++TY+IRIDAYCKKGCF DGLR+F+ MER    PTLETITTLIHGAGIV++  
Sbjct: 252 KRSFKPNSITYNIRIDAYCKKGCFADGLRLFEGMERENLSPTLETITTLIHGAGIVRNPI 311

Query: 306 KARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMF 365
           KARQLFDEI LRNL PD G+YNAL+SSLIRS  +KSA ++M++ME  HIE D +TYH +F
Sbjct: 312 KARQLFDEIRLRNLLPDTGSYNALMSSLIRSRHLKSAVALMDEMEENHIEQDDMTYHTIF 371

Query: 366 SGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYC 425
           SGL+R  D+ G   LY KMV R+FVPKTRT VMI+KFFC N ++D GL  W YLVEKGYC
Sbjct: 372 SGLMRTSDIEGVSRLYHKMVDRSFVPKTRTVVMIIKFFCVNHQLDSGLHLWRYLVEKGYC 431

Query: 426 PHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEEL 485
           PHSH LDLLVTGLC+RG V +AFECS QM+ERGR MSEA+F  +E  LL+     K  +L
Sbjct: 432 PHSHALDLLVTGLCSRGRVNEAFECSTQMVERGRHMSEASFRTLESLLLQEGEMHKLRKL 491

Query: 486 ERLRKKLKTVLPPTKSALI 505
           +++ KKL+ VLP  K   I
Sbjct: 492 KQMIKKLQKVLPQVKGHTI 507

The following BLAST results are available for this feature:
BLAST of Csa5G173440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP291_ARATH1.4e-15656.97Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN... [more]
PPR5_ARATH2.0e-6229.94Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
PPR12_ARATH1.1e-3327.84Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP389_ARATH2.1e-2725.70Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidop... [more]
PP247_ARATH6.0e-2724.92Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
BLAST of Csa5G173440 vs. TrEMBL
Match NameE-valueIdentityDescription
D7SS92_VITVI3.4e-18665.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0117g00160 PE=4 SV=... [more]
A5AKR5_VITVI3.4e-18665.05Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012424 PE=4 SV=1[more]
M5X718_PRUPE4.4e-18665.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003671mg PE=4 SV=1[more]
A0A061GGT7_THECC2.1e-18362.40Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
W9T0E2_9ROSA3.6e-18064.29Uncharacterized protein OS=Morus notabilis GN=L484_022712 PE=4 SV=1[more]
BLAST of Csa5G173440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61360.17.8e-15856.97 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02420.11.1e-6329.94 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G05670.16.4e-3527.84 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G16640.11.2e-2825.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22470.13.4e-2824.92 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Csa5G173440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451922|ref|XP_004143709.1|8.6e-292100.00PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativu... [more]
gi|659073036|ref|XP_008467224.1|7.9e-26993.64PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo][more]
gi|645250925|ref|XP_008231442.1|7.5e-18765.66PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X1... [more]
gi|645250932|ref|XP_008231445.1|7.5e-18765.66PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like isoform X2... [more]
gi|694412735|ref|XP_009334670.1|1.3e-18665.53PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Pyrus x b... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU089414cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G173440.1Csa5G173440.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU089414CU089414transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 187..211
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 321..369
score: 9.9E-12coord: 216..265
score: 5.6
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 254..287
score: 7.4E-10coord: 187..213
score: 9.0E-5coord: 325..357
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 252..286
score: 12.244coord: 145..175
score: 5.393coord: 217..251
score: 9.087coord: 109..139
score: 5.47coord: 427..461
score: 7.333coord: 287..321
score: 7.059coord: 322..356
score: 9.942coord: 183..213
score: 8.462coord: 357..391
score: 8.923coord: 392..426
score: 7
NoneNo IPR availableunknownCoilCoilcoord: 475..495
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..18
score: 1.3E-275coord: 49..503
score: 1.3E
NoneNo IPR availablePANTHERPTHR24015:SF535SUBFAMILY NOT NAMEDcoord: 1..18
score: 1.3E-275coord: 49..503
score: 1.3E