Cla97C01G005780 (gene) Watermelon (97103) v2

Overview
NameCla97C01G005780
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCla97Chr01 : 5542521 .. 5544059 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTCTCTTGAGGCTAACTCAAGTCCCTCAATTACCCATATCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCATCTTCAGAACCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCACCCCCTTCGCCCCACTCTTCTTCAACACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGTCTCTTCGCAGCCCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAACCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTCGATCAATCATGGGAATTGATGCGTGAGATTAAACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCCTTCGAAGAAACAATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGAGCGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAGGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGATGTTTTGTGGATGGTTTGAGAGTTTTTGAAGAAATGGGGAGGGCAAAATTTGAGCCAACATTGGAAATAATCACTACTCTGATCCATGGAGCAGGGGTAGCAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTGTGTCCTGACATTGGAGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTCTGCAGCAGCTTTAATGGAAGATATGGAGGCTAAACACATTGGACATGACAGCATGACCTATCATATGATGTTCTCAGGCTTCATGCGAATGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAAATGATACGACGAAATTTCGTGCCTAAAGCACGAACGGTAGTCATGATAATGAAGTTTTTCTGCGAAAACCGCCGAGTTGATTTGGGTTTGGATTTGTGGGGTTATTTGGTAGAGAAAGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCATCATTTCTGATCATTGAGAGATCTCTTTTGCAGGCACATGCAACAGACAAATATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAAGCAGCTTTCATCTGAGATTCCAGCATCCTCATAG

mRNA sequence

ATGGCGATTCTCTTGAGGCTAACTCAAGTCCCTCAATTACCCATATCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCATCTTCAGAACCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCACCCCCTTCGCCCCACTCTTCTTCAACACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGTCTCTTCGCAGCCCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAACCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTCGATCAATCATGGGAATTGATGCGTGAGATTAAACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCCTTCGAAGAAACAATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGAGCGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAGGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGATGTTTTGTGGATGGTTTGAGAGTTTTTGAAGAAATGGGGAGGGCAAAATTTGAGCCAACATTGGAAATAATCACTACTCTGATCCATGGAGCAGGGGTAGCAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTGTGTCCTGACATTGGAGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTCTGCAGCAGCTTTAATGGAAGATATGGAGGCTAAACACATTGGACATGACAGCATGACCTATCATATGATGTTCTCAGGCTTCATGCGAATGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAAATGATACGACGAAATTTCGTGCCTAAAGCACGAACGGTAGTCATGATAATGAAGTTTTTCTGCGAAAACCGCCGAGTTGATTTGGGTTTGGATTTGTGGGGTTATTTGGTAGAGAAAGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCATCATTTCTGATCATTGAGAGATCTCTTTTGCAGGCACATGCAACAGACAAATATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAAGCAGCTTTCATCTGAGATTCCAGCATCCTCATAG

Coding sequence (CDS)

ATGGCGATTCTCTTGAGGCTAACTCAAGTCCCTCAATTACCCATATCTTCCCATTCGTTTCTGATTCTTGCAGCTCCTTTTTGTACTCATCTTCATCTTCATCCATCTTCAGAACCCACAACTGAAATCGAAAGAATCGCCAAAATCATCAACGACCATCCATTTCCCGATCACCCCCTTCGCCCCACTCTTCTTCAACACATTCCATCTCCTCTTCCTTCAAACACTTTCCTCAATGACGTTCTTGGCCGTCTCTTCGCAGCCCATTCCAATGGCCTCAAAGCCTTGGAGTTCTTCAAATTCTGCCTCCATCATTCTCAACCTTCCCCAACTCCAGACGCTTTCGAGAAGACGCTTCACATTCTCGCCAGGATGAGGTATTTCGATCAATCATGGGAATTGATGCGTGAGATTAAACGAACTCACCCTTTTTTGCTTACTCTCAAGTCCATGAGCATCTTGCTTTCGAAGATCGCGAAGTTTCAATCCTTCGAAGAAACAATCGAAGCGTTTCAGAGAATGGAGAATGAAGTGTTTGTTGGAAGGAAATTTGGTACTGAGGAATTTAATGTACTCCTTCGAGCTTTTTGCACTCAGAGACAGATGAAAGAGGCGCGATCAGTGTTCCAAAAGATGTATTCTCGATTTCCCCCAAATACTAAAACCATGAATCTCTTGCTTTTAGGTTTTAAGGAATCGAGCGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAGGAGAGGTTTTAAGCCAAATGCTGTGACTTATAGCATTAGAATTGATGCATATTGCAAAAGAGGATGTTTTGTGGATGGTTTGAGAGTTTTTGAAGAAATGGGGAGGGCAAAATTTGAGCCAACATTGGAAATAATCACTACTCTGATCCATGGAGCAGGGGTAGCAAAGGATAAAACCAAAGCACGCCAACTGTTTGATGAAATTACTCTGAGAAACTTGTGTCCTGACATTGGAGCTTATAATGCTTTGATAAGTTCCTTGATTAGGTCTGATGATGTAAAGTCTGCAGCAGCTTTAATGGAAGATATGGAGGCTAAACACATTGGACATGACAGCATGACCTATCATATGATGTTCTCAGGCTTCATGCGAATGGAGGATGTTGGTGGGTTTTATGAGTTGTATAGCAAAATGATACGACGAAATTTCGTGCCTAAAGCACGAACGGTAGTCATGATAATGAAGTTTTTCTGCGAAAACCGCCGAGTTGATTTGGGTTTGGATTTGTGGGGTTATTTGGTAGAGAAAGGATACTGTCCTCATAGTCATGTGTTGGATCTGTTGGTAACAGGATTATGTGCCCGTGGAATGGTCCTTCAAGCATTTGAGTGCTCCAAACAAATGTTGGAGAGAGGGAGACAAATGAGTGAAGCATCATTTCTGATCATTGAGAGATCTCTTTTGCAGGCACATGCAACAGACAAATATGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTTTGCCCCCACCAAAGCAGCTTTCATCTGAGATTCCAGCATCCTCATAG

Protein sequence

MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSDDVKSAAALMEDMEAKHIGHDSMTYHMMFSGFMRMEDVGGFYELYSKMIRRNFVPKARTVVMIMKFFCENRRVDLGLDLWGYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHATDKYGELEQLRKKLKTVLPPPKQLSSEIPASS
Homology
[Close]
BLAST of Cla97C01G005780 vs. NCBI nr
Match: XP_016898809.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo])

HSP 1 Score: 611.3 bits (1575), Expect = 3.0e-171
Identity = 333/511 (65.17%), Postives = 352/511 (68.88%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           MAIL++LTQ+PQ PISSHSFLI AA +CTHLH     + TTEIERIAKIINDHPFPD PL
Sbjct: 5   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-----KSTTEIERIAKIINDHPFPDQPL 64

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
            PTLL  IPSPLPSNTFLNDVLG LFAAHSNGLKALEFFKFCLHHSQ SPTPDAFEKTLH
Sbjct: 65  HPTLLHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLH 124

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           ILARMRYFDQSWELMREI++THPFLLTLKSMSILLS+IAKF+SFEETIEAFQRMENEVFV
Sbjct: 125 ILARMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFV 184

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKESSD+T+VE
Sbjct: 185 GRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVE 244

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMI+RGFKPNAVTYSIRIDAYCK+GCFVDGLRVF+EM RAK EPTLE ITTLIHGA
Sbjct: 245 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGA 304

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           G+ KDKTKAR                                                  
Sbjct: 305 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDS 364

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                                       
Sbjct: 365 VTYHMMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWAY 424

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
                                    VLQAFECSKQMLERGRQMSEA+FLI+ERSLL+A A
Sbjct: 425 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARA 484

Query: 481 TDKYGELEQLRKKLKTVLPPPKQLSSEIPAS 512
           TDKYGELEQLRKKLKTVLPPP QL SEIPAS
Sbjct: 485 TDKYGELEQLRKKLKTVLPPPNQLLSEIPAS 510

[Close]
BLAST of Cla97C01G005780 vs. NCBI nr
Match: XP_004143709.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativus] >XP_011654894.1 PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativus] >XP_011654895.1 PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativus] >KGN50416.1 hypothetical protein Csa_5G173440 [Cucumis sativus])

HSP 1 Score: 589.0 bits (1517), Expect = 1.6e-164
Identity = 321/502 (63.94%), Postives = 344/502 (68.53%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           MA+L++LT +PQ PISSHSFLILAA +CT  +LHPSS+ TTEIERIAKIINDHPFPD PL
Sbjct: 1   MAVLMKLTLIPQKPISSHSFLILAASYCT--NLHPSSKSTTEIERIAKIINDHPFPDQPL 60

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
            PTLL  IPSPLPSNTFLNDVLG+LFAAHSNGLKALEFFKFCLHHSQ  PT DAFEKTLH
Sbjct: 61  HPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLH 120

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           IL+RMRYFDQSWELMREI++THPFLLTLKSMSILLS+IAKF SFEETIEAFQRMENEVFV
Sbjct: 121 ILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFV 180

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKESSD+T+VE
Sbjct: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVE 240

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMI+RGFKPNAVTYSIRIDAYCK+GCFVDGLRVF+EM RAK EPTLE ITTLIHGA
Sbjct: 241 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGA 300

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           G+ KDKTKAR                                                  
Sbjct: 301 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDS 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                                       
Sbjct: 361 VTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAY 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
                                    VLQAFECSKQMLERGRQMSEA+FLI+ER LL+AHA
Sbjct: 421 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHA 480

Query: 481 TDKYGELEQLRKKLKTVLPPPK 503
           TDKY ELE+LRKKLKTVLPP K
Sbjct: 481 TDKYEELERLRKKLKTVLPPTK 500

[Close]
BLAST of Cla97C01G005780 vs. NCBI nr
Match: XP_022929103.1 (pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929104.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929105.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929106.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata])

HSP 1 Score: 538.1 bits (1385), Expect = 3.2e-149
Identity = 440/512 (85.94%), Postives = 452/512 (88.28%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           M I  RLTQ+ Q+ I  HSFLI AAPF T  HLH SSEP  EIERI KIINDHPFPD PL
Sbjct: 1   MVIPTRLTQISQIRIFFHSFLIPAAPFST--HLHQSSEPGGEIERITKIINDHPFPDQPL 60

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
           RPTLL HIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQ SPTPDAFEKTLH
Sbjct: 61  RPTLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLH 120

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           ILARMRYFDQSWELMREI+RTHPFLLTLKSMSILL+KIAKFQSFEETIEAF+RMENEVFV
Sbjct: 121 ILARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFV 180

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPNTKTMNLLLLGFKESS+VTAVE
Sbjct: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVE 240

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMIRRGFKP+AVTYSIR+DAYCKRGCFVDGLRVFE                     
Sbjct: 241 LFYHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
           XXXXXXXXXXXXXXXXXXXXXX   V +AFECSKQMLERGRQMS+A+FLI+ERSLLQA A
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXRGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADA 480

Query: 481 TDKYGELEQLRKKLKTVLPPPKQLSSEIPASS 513
            D  GELEQLRKKLKTVLPPPKQL  EIPASS
Sbjct: 481 KDILGELEQLRKKLKTVLPPPKQLPYEIPASS 510

[Close]
BLAST of Cla97C01G005780 vs. NCBI nr
Match: XP_022970168.1 (pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022970169.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022970170.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022970171.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022970172.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022970173.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima])

HSP 1 Score: 526.9 bits (1356), Expect = 7.4e-146
Identity = 436/512 (85.16%), Postives = 448/512 (87.50%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           M I  RLTQ+ Q+PI    FLI AAPF T  HLH SSEP  EIERI KIIN HPFPD PL
Sbjct: 1   MVIPTRLTQIAQIPIFFRYFLIPAAPFST--HLHQSSEPGGEIERITKIINGHPFPDQPL 60

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
           RPTLL HIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQ SPTPDAFEKTLH
Sbjct: 61  RPTLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLH 120

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           ILARMRYFDQSWELMREI+RTHPFLLTLKSMSILL+KIAKFQSFEETIEAF+RMENEVFV
Sbjct: 121 ILARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFV 180

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPNTKTMNLLLLGFKESS+VTAVE
Sbjct: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVE 240

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMIRRGFKP+ VTYSIR+DAYCKRGCFVDGLRV                       
Sbjct: 241 LFYHEMIRRGFKPDVVTYSIRMDAYCKRGCFVDGLRVXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
           XXXXXXXXXXXXXXXXXXXXXXX  V +AFECSKQMLERGRQMS+A+FLI+ERSLLQA A
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADA 480

Query: 481 TDKYGELEQLRKKLKTVLPPPKQLSSEIPASS 513
            D  GELEQLRKKLKTVLPPPKQL  EIPASS
Sbjct: 481 KDILGELEQLRKKLKTVLPPPKQLPYEIPASS 510

[Close]
BLAST of Cla97C01G005780 vs. NCBI nr
Match: XP_023551581.1 (pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo] >XP_023551582.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo] >XP_023551583.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo] >XP_023551584.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo] >XP_023551586.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo] >XP_023551587.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.1 bits (1294), Expect = 1.2e-138
Identity = 428/512 (83.59%), Postives = 440/512 (85.94%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           M I  RLTQ+ Q+ I   SFLI AAPF T  HLH SSEP  EIERI KIINDHPFPD PL
Sbjct: 1   MVIPTRLTQISQIRIFFRSFLIPAAPFST--HLHQSSEPGGEIERITKIINDHPFPDQPL 60

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
           RPTL+ HIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQ SPTPDAFEKTLH
Sbjct: 61  RPTLIHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLH 120

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           ILARMRYFDQSWELMREI+RTHPFLLTLKSMSILL+KIAKFQSFEETIEAF+RMENEVFV
Sbjct: 121 ILARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFV 180

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPNTKTMNLLLLGFKESS+VTAVE
Sbjct: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVE 240

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMIRRGFKP+AVTYSIR+DAYCKRGCFVDGLRVFE                     
Sbjct: 241 LFYHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
           XXXXXXXXXXXXXXXXXXXXXXXXX               RQMS+A+FLI+ERSLLQA A
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQMSDAAFLIMERSLLQADA 480

Query: 481 TDKYGELEQLRKKLKTVLPPPKQLSSEIPASS 513
            D  GELEQLRKKLKTVLPPPKQL  EIPASS
Sbjct: 481 KDILGELEQLRKKLKTVLPPPKQLPYEIPASS 510

[Close]
BLAST of Cla97C01G005780 vs. TrEMBL
Match: tr|A0A1S4DS46|A0A1S4DS46_CUCME (pentatricopeptide repeat-containing protein At3g61360 OS=Cucumis melo OX=3656 GN=LOC103504627 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.0e-171
Identity = 333/511 (65.17%), Postives = 352/511 (68.88%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           MAIL++LTQ+PQ PISSHSFLI AA +CTHLH     + TTEIERIAKIINDHPFPD PL
Sbjct: 5   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-----KSTTEIERIAKIINDHPFPDQPL 64

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
            PTLL  IPSPLPSNTFLNDVLG LFAAHSNGLKALEFFKFCLHHSQ SPTPDAFEKTLH
Sbjct: 65  HPTLLHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLH 124

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           ILARMRYFDQSWELMREI++THPFLLTLKSMSILLS+IAKF+SFEETIEAFQRMENEVFV
Sbjct: 125 ILARMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFV 184

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKESSD+T+VE
Sbjct: 185 GRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVE 244

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMI+RGFKPNAVTYSIRIDAYCK+GCFVDGLRVF+EM RAK EPTLE ITTLIHGA
Sbjct: 245 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGA 304

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           G+ KDKTKAR                                                  
Sbjct: 305 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDS 364

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                                       
Sbjct: 365 VTYHMMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWAY 424

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
                                    VLQAFECSKQMLERGRQMSEA+FLI+ERSLL+A A
Sbjct: 425 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARA 484

Query: 481 TDKYGELEQLRKKLKTVLPPPKQLSSEIPAS 512
           TDKYGELEQLRKKLKTVLPPP QL SEIPAS
Sbjct: 485 TDKYGELEQLRKKLKTVLPPPNQLLSEIPAS 510

[Close]
BLAST of Cla97C01G005780 vs. TrEMBL
Match: tr|A0A0A0KRS8|A0A0A0KRS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173440 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 321/502 (63.94%), Postives = 344/502 (68.53%), Query Frame = 0 

Query: 1   MAILLRLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPL 60
           MA+L++LT +PQ PISSHSFLILAA +CT  +LHPSS+ TTEIERIAKIINDHPFPD PL
Sbjct: 1   MAVLMKLTLIPQKPISSHSFLILAASYCT--NLHPSSKSTTEIERIAKIINDHPFPDQPL 60

Query: 61  RPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLH 120
            PTLL  IPSPLPSNTFLNDVLG+LFAAHSNGLKALEFFKFCLHHSQ  PT DAFEKTLH
Sbjct: 61  HPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLH 120

Query: 121 ILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV 180
           IL+RMRYFDQSWELMREI++THPFLLTLKSMSILLS+IAKF SFEETIEAFQRMENEVFV
Sbjct: 121 ILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIEAFQRMENEVFV 180

Query: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240
           GRKFGTEEFNVLLRAFCTQRQMKEARSVF KMYSRFPPN KT+NLLLLGFKESSD+T+VE
Sbjct: 181 GRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVE 240

Query: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGA 300
           LFYHEMI+RGFKPNAVTYSIRIDAYCK+GCFVDGLRVF+EM RAK EPTLE ITTLIHGA
Sbjct: 241 LFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGA 300

Query: 301 GVAKDKTKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           G+ KDKTKAR                                                  
Sbjct: 301 GIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDS 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                                                       
Sbjct: 361 VTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAY 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXVLQAFECSKQMLERGRQMSEASFLIIERSLLQAHA 480
                                    VLQAFECSKQMLERGRQMSEA+FLI+ER LL+AHA
Sbjct: 421 LVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERCLLKAHA 480

Query: 481 TDKYGELEQLRKKLKTVLPPPK 503
           TDKY ELE+LRKKLKTVLPP K
Sbjct: 481 TDKYEELERLRKKLKTVLPPTK 500

[Close]
BLAST of Cla97C01G005780 vs. TrEMBL
Match: tr|A0A2P4H2D2|A0A2P4H2D2_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_48078 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119
Identity = 212/292 (72.60%), Postives = 249/292 (85.27%), Query Frame = 0 

Query: 21  LILAAPFCTHLHLHPSSEPTT--EIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFL 80
           L+    F   + ++ +  P T  EI +I +IINDHPFPD PL+PTLLQ+ P P+ SN F+
Sbjct: 62  LVARLQFSKVIEINEALPPKTNGEINKIIRIINDHPFPDQPLQPTLLQYTPPPILSNNFV 121

Query: 81  NDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREI 140
            +VLGRLFAAHSNGLKALEFFKF LHHSQ  P+PDAFEKTLHIL RMRYFD++WELM EI
Sbjct: 122 ENVLGRLFAAHSNGLKALEFFKFYLHHSQFCPSPDAFEKTLHILTRMRYFDKAWELMEEI 181

Query: 141 KRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCT 200
           ++ HP LLTLKSMSI+LSKIAKFQSFEET+EAFQ+MEN++F GRKFGT+EFNVLL+A+CT
Sbjct: 182 RQRHPSLLTLKSMSIMLSKIAKFQSFEETLEAFQKMENDIFAGRKFGTDEFNVLLQAYCT 241

Query: 201 QRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIRRGFKPNAVTY 260
           QRQMKEARSVF KM+SRFPPNTKTMN+LLLGFKES +VTAVELFYHEM+RRGFKPN +TY
Sbjct: 242 QRQMKEARSVFLKMHSRFPPNTKTMNILLLGFKESGNVTAVELFYHEMVRRGFKPNRITY 301

Query: 261 SIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKDKTKAR 311
           +IRIDAYCK+GCF DGLR+ EEM +    PTLE ITTLIHGAG+ ++ TKAR
Sbjct: 302 NIRIDAYCKKGCFGDGLRLLEEMEQVNCLPTLETITTLIHGAGIVRNTTKAR 353

[Close]
BLAST of Cla97C01G005780 vs. TrEMBL
Match: tr|A5AKR5|A5AKR5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012424 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.3e-118
Identity = 217/305 (71.15%), Postives = 251/305 (82.30%), Query Frame = 0 

Query: 6   RLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLL 65
           R  Q  Q+P     FL +A  F +    HPS E  +EI+R+ +IINDHPFPDHPL  TL+
Sbjct: 8   RSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTLI 67

Query: 66  QHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARM 125
           QH+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+  P+ DAFEKTLHIL RM
Sbjct: 68  QHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRM 127

Query: 126 RYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFG 185
           RYFD++WELM EI++THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+FG
Sbjct: 128 RYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFG 187

Query: 186 TEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHE 245
             EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFYHE
Sbjct: 188 ANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHE 247

Query: 246 MIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKD 305
           MIRRGFKPN+VTY+IRIDAYCK+GCF DGLR+ EEM +A   PTLE ITTLIHGAGVA++
Sbjct: 248 MIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQN 307

Query: 306 KTKAR 311
            ++AR
Sbjct: 308 ISRAR 310

[Close]
BLAST of Cla97C01G005780 vs. TrEMBL
Match: tr|D7SS92|D7SS92_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0117g00160 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.3e-118
Identity = 217/305 (71.15%), Postives = 251/305 (82.30%), Query Frame = 0 

Query: 6   RLTQVPQLPISSHSFLILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLL 65
           R  Q  Q+P     FL +A  F +    HPS E  +EI+R+ +IINDHPFPDHPL  TL+
Sbjct: 8   RSNQPYQIPQKLTLFLNIA--FKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHSTLI 67

Query: 66  QHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARM 125
           QH+P  L SNTF+ +VLGRLFAAHSNG KA EFFKF L HS+  P+ DAFEKTLHIL RM
Sbjct: 68  QHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRM 127

Query: 126 RYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFG 185
           RYFD++WELM EI++THP LLTLKSMSI+LS+IAKFQS+E+T+EAF RME  VF GR+FG
Sbjct: 128 RYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFG 187

Query: 186 TEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHE 245
             EFNVLLRAFCTQRQMKEARSVF KM+SRF PNTKTMN+LLLGFKES DVTAVELFYHE
Sbjct: 188 ANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHE 247

Query: 246 MIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKD 305
           MIRRGFKPN+VTY+IRIDAYCK+GCF DGLR+ EEM +A   PTLE ITTLIHGAGVA++
Sbjct: 248 MIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQN 307

Query: 306 KTKAR 311
            ++AR
Sbjct: 308 ISRAR 310

[Close]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match: sp|Q9M2C8|PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX=3702 GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 6.3e-104
Identity = 189/297 (63.64%), Postives = 239/297 (80.47%), Query Frame = 0 

Query: 15  ISSHSFLILAAP-FCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLLQHIPSPLP 74
           ISS S+  L AP   +   L  +S   TEIERI  IIN HPFP+HP++P L +HIP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWE 134
           S  F+++VLGRLFAAHSNGLKALEFFK+ L  S+ SPT D+FEKTLHILARMRYFDQ+W 
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124

Query: 135 LMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLL 194
           LM E+++ +P LL+ KSMSILL KIAKF S+EET+EAF +ME E+F  +KFG +EFN+LL
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILL 184

Query: 195 RAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIRRGFKP 254
           RAFCT+R+MKEARS+F+K++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM++RGFKP
Sbjct: 185 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 244

Query: 255 NAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKDKTKAR 311
           N+VTY IRID +CK+  F + LR+FE+M R  F+ T++I+TTLIHG+GVA++K KAR
Sbjct: 245 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR 300

[Close]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match: sp|Q9FZ19|PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 5.6e-28
Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 0 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFC-----LHHSQPSPTPDAFEKTLHILARMRYF 133
           S   ++ VL R+  +H N ++ LEF+++       +HS  S      +  L+IL R R F
Sbjct: 70  SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFS-----LDTMLYILGRNRKF 129

Query: 134 DQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEE 193
           DQ WEL+ E KR    L++ ++M ++L ++AK  S  +T+E+F + +    V   F T  
Sbjct: 130 DQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTAC 189

Query: 194 FNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIR 253
           FN LLR  C ++ M +AR+V+  +  +F P+ +T N+LL G+K S +    E F+ EM  
Sbjct: 190 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFFEEMKG 249

Query: 254 RGFKPNAVTYSIRIDAYCK 268
           +G KP+ VTY+  ID YCK
Sbjct: 250 KGLKPDVVTYNSLIDVYCK 258

[Close]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match: sp|Q0WP85|PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.8e-16
Identity = 69/247 (27.94%), Postives = 118/247 (47.77%), Query Frame = 0 

Query: 22  ILAAPFCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFLNDV 81
           I++A F  +L   P  EP+++ E I++++  +  P H +  +L  +  S  P+   ++  
Sbjct: 23  IISAGFTLNL---PKLEPSSDAELISQMLITNHNPFHFMESSLQLNGISLTPN--LIHQT 82

Query: 82  LGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREIKRT 141
           L RL     N   AL FF++      PS TP +F   + IL R+R FD   +L+ E+ +T
Sbjct: 83  LLRL---RHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQT 142

Query: 142 HPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFV-GRKFGTEEFNVLLRAFCTQR 201
            P     ++  IL+ ++       + + AF   +   F+  R+F   EF  LL   C   
Sbjct: 143 SP-----ETFLILVKRLIAAGLTRQAVRAFD--DAPCFLENRRFRLVEFGFLLDTLCKYG 202

Query: 202 QMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIRRGFKPNAVTYSI 261
             K A  VF +    F  + K   +L+ G+ +   +   E F  EMI  G +PN VTY++
Sbjct: 203 YTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNV 254

Query: 262 RIDAYCK 268
            ++  C+
Sbjct: 263 LLNGICR 254

[Close]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 62/270 (22.96%), Postives = 120/270 (44.44%), Query Frame = 0 

Query: 42  EIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKF 101
           ++ +I+K++ D       LR  L +      PSN  + ++L R+    ++   A  FF +
Sbjct: 96  DVGKISKLVKDCGSDRKELRNKLEE--CDVKPSNELVVEILSRV---RNDWETAFTFFVW 155

Query: 102 CLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKF 161
                    +   +   + IL +MR FD +W L+ E+++  P L+  +++ I++ K    
Sbjct: 156 AGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 215

Query: 162 QSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTK 221
               + I  F   +       + G ++F  LL A C  + + +A  +      ++P + K
Sbjct: 216 HDVGKAINTFHAYKR---FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAK 275

Query: 222 TMNLLLLGF-KESSDVTAVELFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEE 281
           + N++L G+          E  + EM   G K + V+YS  I  Y K G     L++F+ 
Sbjct: 276 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 335

Query: 282 MGRAKFEPTLEIITTLIHGAGVAKDKTKAR 311
           M +   EP  ++   ++H    A   ++AR
Sbjct: 336 MKKECIEPDRKVYNAVVHALAKASFVSEAR 357

[Close]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-08
Identity = 36/117 (30.77%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 115 FEKTLHILARMRYFDQSWELMREI-KRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQR 174
           +   + +L + R FD  WEL+ E+ K     L+TL +MS ++ ++AK   + + ++AF  
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228

Query: 175 MENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGF 231
           ME     G K  T   N L+ A   +  ++ A  VF K++    P+ +T N+L+ GF
Sbjct: 229 MEKS--YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283

[Close]
BLAST of Cla97C01G005780 vs. TAIR10
Match: AT3G61360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 379.4 bits (973), Expect = 3.5e-105
Identity = 189/297 (63.64%), Postives = 239/297 (80.47%), Query Frame = 0 

Query: 15  ISSHSFLILAAP-FCTHLHLHPSSEPTTEIERIAKIINDHPFPDHPLRPTLLQHIPSPLP 74
           ISS S+  L AP   +   L  +S   TEIERI  IIN HPFP+HP++P L +HIP    
Sbjct: 5   ISSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSL 64

Query: 75  SNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWE 134
           S  F+++VLGRLFAAHSNGLKALEFFK+ L  S+ SPT D+FEKTLHILARMRYFDQ+W 
Sbjct: 65  SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124

Query: 135 LMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLL 194
           LM E+++ +P LL+ KSMSILL KIAKF S+EET+EAF +ME E+F  +KFG +EFN+LL
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILL 184

Query: 195 RAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIRRGFKP 254
           RAFCT+R+MKEARS+F+K++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM++RGFKP
Sbjct: 185 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 244

Query: 255 NAVTYSIRIDAYCKRGCFVDGLRVFEEMGRAKFEPTLEIITTLIHGAGVAKDKTKAR 311
           N+VTY IRID +CK+  F + LR+FE+M R  F+ T++I+TTLIHG+GVA++K KAR
Sbjct: 245 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR 300

[Close]
BLAST of Cla97C01G005780 vs. TAIR10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 3.1e-29
Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 0 

Query: 74  SNTFLNDVLGRLFAAHSNGLKALEFFKFC-----LHHSQPSPTPDAFEKTLHILARMRYF 133
           S   ++ VL R+  +H N ++ LEF+++       +HS  S      +  L+IL R R F
Sbjct: 70  SKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFS-----LDTMLYILGRNRKF 129

Query: 134 DQSWELMREIKRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEE 193
           DQ WEL+ E KR    L++ ++M ++L ++AK  S  +T+E+F + +    V   F T  
Sbjct: 130 DQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTAC 189

Query: 194 FNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVELFYHEMIR 253
           FN LLR  C ++ M +AR+V+  +  +F P+ +T N+LL G+K S +    E F+ EM  
Sbjct: 190 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFFEEMKG 249

Query: 254 RGFKPNAVTYSIRIDAYCK 268
           +G KP+ VTY+  ID YCK
Sbjct: 250 KGLKPDVVTYNSLIDVYCK 258

[Close]
BLAST of Cla97C01G005780 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-15
Identity = 62/270 (22.96%), Postives = 120/270 (44.44%), Query Frame = 0 

Query: 42  EIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKF 101
           ++ +I+K++ D       LR  L +      PSN  + ++L R+    ++   A  FF +
Sbjct: 96  DVGKISKLVKDCGSDRKELRNKLEE--CDVKPSNELVVEILSRV---RNDWETAFTFFVW 155

Query: 102 CLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREIKRTHPFLLTLKSMSILLSKIAKF 161
                    +   +   + IL +MR FD +W L+ E+++  P L+  +++ I++ K    
Sbjct: 156 AGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 215

Query: 162 QSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTK 221
               + I  F   +       + G ++F  LL A C  + + +A  +      ++P + K
Sbjct: 216 HDVGKAINTFHAYKR---FKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAK 275

Query: 222 TMNLLLLGF-KESSDVTAVELFYHEMIRRGFKPNAVTYSIRIDAYCKRGCFVDGLRVFEE 281
           + N++L G+          E  + EM   G K + V+YS  I  Y K G     L++F+ 
Sbjct: 276 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 335

Query: 282 MGRAKFEPTLEIITTLIHGAGVAKDKTKAR 311
           M +   EP  ++   ++H    A   ++AR
Sbjct: 336 MKKECIEPDRKVYNAVVHALAKASFVSEAR 357

[Close]
BLAST of Cla97C01G005780 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 9.4e-10
Identity = 36/117 (30.77%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 115 FEKTLHILARMRYFDQSWELMREI-KRTHPFLLTLKSMSILLSKIAKFQSFEETIEAFQR 174
           +   + +L + R FD  WEL+ E+ K     L+TL +MS ++ ++AK   + + ++AF  
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228

Query: 175 MENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGF 231
           ME     G K  T   N L+ A   +  ++ A  VF K++    P+ +T N+L+ GF
Sbjct: 229 MEKS--YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283

[Close]
BLAST of Cla97C01G005780 vs. TAIR10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 8.0e-09
Identity = 48/193 (24.87%), Postives = 86/193 (44.56%), Query Frame = 0 

Query: 33  LHPSSEPTTEIERIAKIINDHPFPDHPLRPTLLQHIPSPLPSNTFLNDVLGRLFAAHSNG 92
           L+ SSE   ++  +AK I+        L             S   + DVL R     + G
Sbjct: 58  LYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRF---RNAG 117

Query: 93  LKALEFFKFCLHHSQPSPTPDAFEKTLHILARMRYFDQSWELMREIKRTHPFLLTLKSMS 152
           L    FF++         +  A+   +   A++R +   W+L+  +++    +L +++  
Sbjct: 118 LLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFC 177

Query: 153 ILLSKIAKFQSFEETIEAFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFQKM 212
           I++ K A+ Q  +E I AF  ME             FN LL A C  + +++A+ VF+ M
Sbjct: 178 IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVA---FNGLLSALCKSKNVRKAQEVFENM 237

Query: 213 YSRFPPNTKTMNL 226
             RF P++KT ++
Sbjct: 238 RDRFTPDSKTYSI 242

The following BLAST results are available for this feature:
BLAST of Cla97C01G005780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016898809.13.0e-17165.17PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis melo][more]
XP_004143709.11.6e-16463.94PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Cucumis sativu... [more]
XP_022929103.13.2e-14985.94pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_0... [more]
XP_022970168.17.4e-14685.16pentatricopeptide repeat-containing protein At3g61360 [Cucurbita maxima] >XP_022... [more]
XP_023551581.11.2e-13883.59pentatricopeptide repeat-containing protein At3g61360 [Cucurbita pepo subsp. pep... [more]
BLAST of Cla97C01G005780 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DS46|A0A1S4DS46_CUCME2.0e-17165.17pentatricopeptide repeat-containing protein At3g61360 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0KRS8|A0A0A0KRS8_CUCSA1.1e-16463.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173440 PE=4 SV=1[more]
tr|A0A2P4H2D2|A0A2P4H2D2_QUESU2.3e-11972.60Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_4... [more]
tr|A5AKR5|A5AKR5_VITVI3.3e-11871.15Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012424 PE=4 SV=1[more]
tr|D7SS92|D7SS92_VITVI3.3e-11871.15Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0117g00160 PE=4 SV=... [more]
BLAST of Cla97C01G005780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M2C8|PP291_ARATH6.3e-10463.64Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX... [more]
sp|Q9FZ19|PPR5_ARATH5.6e-2836.18Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
sp|Q0WP85|PP150_ARATH3.8e-1627.94Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... [more]
sp|Q9LFQ4|PP383_ARATH3.5e-1422.96Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
sp|Q9LUJ4|PP248_ARATH1.7e-0830.77Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
BLAST of Cla97C01G005780 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61360.13.5e-10563.64Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02420.13.1e-2936.18Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G15010.12.0e-1522.96Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G22670.19.4e-1030.77Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77360.18.0e-0924.87Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G005780.1Cla97C01G005780.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 323..371
e-value: 4.3E-9
score: 36.3
coord: 218..267
e-value: 1.7E-10
score: 40.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 189..215
e-value: 1.3E-4
score: 19.9
coord: 362..393
e-value: 5.2E-4
score: 18.0
coord: 256..289
e-value: 2.7E-8
score: 31.5
coord: 327..356
e-value: 0.0019
score: 16.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 189..213
e-value: 0.0027
score: 17.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..253
score: 9.339
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 111..141
score: 5.744
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 11.718
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..177
score: 5.919
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..215
score: 8.528
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 6.873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 8.692
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..393
score: 9.646
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..463
score: 7.333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..428
score: 7.947
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 305..511
e-value: 5.5E-31
score: 110.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 146..304
e-value: 7.8E-27
score: 95.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 20..503
NoneNo IPR availablePANTHERPTHR24015:SF535SUBFAMILY NOT NAMEDcoord: 20..503