Lsi09G005460 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G005460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Nucleotide-sensitive chloride conductance regulator (ICln) family protein
Location	chr09 : 5774848 .. 5781115 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAATGGAAGGATAAGAAAAGAGGTTAATCGAAAAAGGCGTCAGTAGAAAGAGTATGAGGGTTTTAGACAATCGCAAACTCCCAATTTCAGTGATCAAGAGATAGAGAGAGTTGAAGAATTAGGGTTTTAGACAGAATGGCAATGGGACTAAGGCCTTACAACGAGAGAACGGGGAATGGCTTGGGATTACCAGCTTTCGACGTTAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTATTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATCTCCTCCAGGTACCTTCTTTCTCTTTTTCTCTCTCCTTTCCCGCGTTTTCGCTTCATTTTGTTCGATACTCTCTGTTTTAGTGTTTCATCCATTCATACATAAGGGAAATTGTAAGAAAATTTTGGGAATTAGGACCCCTTTTGTGTGGGGAGCTTGTATTTTATTGTTTTTTTAAAGTTGATTTTCTGTTAAGCGAGGGGAGGGGTGTGTTGTGTTTTTCTTTTGTAAATGAAGGCTGTTTATGAATCTTGGGATGAAATGAATGGCGTACCGAATTTAGTAATGAAATGGTCGCTTGTGAGAATTTGATTGATGATGCGAGTATGAGAAAGTTTAGAGGATTGGGAGAACCCCTAAGCTAAAGGAAATTAGAACAAAAGGGGAAATTAAGAATAAATATTAAAAAAATTGCCAAAAGGGAAAATGCCATGGAAAGTGTTGATTGCAGTTGAAACAGGGGGGGAAGAGGTACATTCCTTTGGCGCCATTGTTTAAGGCTCTCAGAAAAGTATGATTTCTTATCTATCCTGTTTTACTTGCTTCCGTTTTCGATGAGAGGTCTTCATTTTCTACATGTGGCTTTCCCTCAATAGTCAACACAACAGTGTCTTCTTTTTCCATAATTTGTTGGTTATTTCTTTAGACATAATGTTAGAGTTTGCAGGTAGTTGCTATATAGGCTTGCAATTGGGATATTAGGATAGAAAGGACCTCTGCAAAATGTGGCTGGTGGAGAACAAGATATTTGGGAGTTTGTCCATACTCCATTGCAAAGTGTGTCGGGACTTCTGATGCTCTTAATGCTCTTTTGTAGGTGAGGGAGGTTATTAGGTTCAATGTATCTTTATGGGTGTCCTTTCATTAGCTTTTTGTAATTATCAGCTCAGCTTGGCCTAATTCTTTTGGGTTGGAGTCCTTTCTTGACTTTAGTTTTGAGATTATTTTCTGGGATTGTTTGAGCTTGGTCTAATTCTTTTGGGTTCAAGTTCCTTCTTGATGTTAGTTTTGAGATTCTATTTTTGGGATTGTTTCTTATATATTCTTGTACATTCTTTCATTTTTGTCAATATGAAAGCCCAGTTTCTAACTATATATGTCTTAATTGTCTACTATTTAATTGAACATGTCCTACCAAACAAAAAAAAAAAAGAAAAAAAAAAAAAAAGAAGAAGCTAATACATTAACTAGTTGACTCATTGAGAAATTGAACATGTTTGTAGGCAAGTGGTTTGGTTGAGTGATGTAGACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTTTGTATGTTCAGGTATTTACTTGTGCAGTTTTACATTATTGCTCATTAATTTTTTATAGTTAAACAGATTCATGATGTCGTTGTTTTTGGTTTAAACTTCTAGTTTTCTTAATGGTTAGTATCCTTGCGTCATCTTATACAAAGCCTACTGAAACTATTTGGTGGTTTTGTTAACTTGAGACGTAAGATTTTCTGTGTCATAACTTTAGCAATTGAAGAAAGAACATTGCTATTGTTAGATGATATATAATTAAATCTATCTTCACCTATGAGCTTAAGCTTTTGGGTCAATTGGTAATTTAACATGGTATCAGAGCAGGTGGTCCAGGGAGGTCTTGTGTTCAAGCCCCTGCAATATTTTTTCCTCCCCATTTAATATTGATTTCCATTTGCTTGGCTCTTCGTCATGTTTTAGGCCCACAAGTGAGGGGGAGTGTTAGATTATATATAATTAAATCTACCTTCACCTATTAGCTTAAGCTGTTGGGTCAATTGGTGATTTAACAGTTATAAATTTTATATATGAGAATAATGAAATAAATGTGAGGTTAAAATAGTATTTTTTTTGAGTTAAAAAACGTGTGAGGGTGTGGATCTGAACCTTTGACCTCTTGGTCGAGAGTACATGCCTTAACAAATTAAAGTATGCTCAGGTTAGTGGTTAAAATACTATTTTAGCCCCAACATTTTCAAATTTATTCCATTTTAGCCCCTACATTTCTAAATGTCCAACTTACACCTAGTACATAGTTCCCACTATTCACAATGTGAATATGTTATCCAAATTTCTAGAGGAAAGGTCCAATGAGGAGGATTCATTAGCAAAAAAGAGCGAGGATTGAGAGGTGTGAATTCAAATTAATTGGTGTCTTATCCATCAAGAATTCAGATTTAGTAGAGGTAGCGTTGCACACATATTGATGAGAAATGATTGTGGATATTAGGGATATTAGTTTCATGAGAGTGATGTGACCACGGAGATGCAAGAACCAAACTCTAAAGAAGAATCACCATTTGATGTGAAAAGGCAGAAAGATGGAATCCCCATCTTAAAGACCACCATTTGATGAGCATAGAATCTCACATGACTGAAGAAAGGAGATCCTATGGATGCGGAAATGGGATGCAAAAATTGCAAAATTTAAGAAGGTTCTGTTACGTAAGAGAGGGAATTACAATTAACGTATGGTGAGGCAGAAGCTAACAGGGATTATAACCTTGCAACAAAGAAATGTAATTTTGATAGTGATGATGTTTGAGGCTATTAGGGTTGAATATTGGAGAGATACAGTTGACAGTTGCTTGTTATGTGGTGGGAGACAAAGGCATGGTGGAGGCAAAGCTTCTTCAGATGAAAATTTCACACAGGTGTGAGGTATAGGTTACATTCTCAGGCCTCTGAAGCTGTGGAATTTAAAAACAAGTTTGTGGGGCAAAACAGAAAAGAATTTTGAGGCTTTGGCCAAGCCAAAGAAAAAATGTAGGTTGTGGGTGAGTAAGCTTGTAACTGAAGCGAAATATAAGTTTTGTGATACACCAATTTCAACTGGAGCAGTTATGAAGGGCTGGTTGGACAGCAACGACAAGTTAAAATACTGTGGAATTTTTTAAGAGCGAATCGTGAAAATCTAAAGTACAAATTTGAATCGGTATATTCAGATTTTCCAATCCGGTTGTTGAGGTGGATAGGGGTTTCTCCATTTTGCTGTGTTAATGGAAACGAAACCAATGAGTCGTGGGTAGAAGAACAGTATGTTTAGTGGGCTGTTGGGATTTAAGTTGGAATTGGATAGGTTTGGAGATTTTTATTTATTTTTTTATTTTTTGAATAATAGTGAAGGAATTAGACTAAGAAAGAAAAGAGTACAACAAACAGATGAGTAATTAGAAAAGACGGTGACAAAAAAATTAGAGGATAAAAAAAAAGAATATATATATCTTTTCATTTGTGCGTCGTATTATTTTGATTTTTCTTTGGAGAAACTATTGGATCCTTCACACTTTGAGGACAAGATGTGTTTTAATGGTTGGGTAATGTTAGGCCATTTGGATAAATGTTAAGGGAAGATTAGTAATCAACTAATAAATTACTTAGTAGGAGCCTGAAGGTGGAAACAATTGGATAGGGTGGGTGAGAAGCATGAAAGCAAGCAATCTTCTACTTGTTTGGCCTTGAGTTTATTCAGGAGACAGGTGTAAACACTTAGATTAGGGAGCGAGAAGGTCCCAAAGTTTAGGATGGTTGGTTTATTAATTATAGGAGTGTGTGACTTGGTCTTCCTTGAAAAGTGGAGACTTTATTTATAACTTGTGCTATATAAGTGTGGGAGAACTCCAACTTGTGGAACCATACCATTCTTCACTTGCTCACTCTCGCTCTTGTGTAAACTAGACGAGGTGGAACGCAATAGCAAAGCATGTATCCATTCCACCCTTGAGTGTCGGATCCATTTAGGGTCATGCATACACACATCAACTCCTTTCTTAGCCTCCTGACCAGGGACTAGGAGTCACCTTCCTTTAGTATAGGTCAGTCCAAATGACATTACAAGGAATTCATAGGTACCAATATTTAGTCACACATGTACTCTACCCCCCATGTTCCCCTTTACAATTCTCACATGTGAGTAACCAAACCACAAGTCTAGTTTGGTGAAGACTGCAACTTGCGACAGTCTATCGAAAAAATCGGTTGCATTTGGAATCAGGTTCTTGTTCTTGCCAGTCACTTTGTTCAAGGCGTTGTAATCTACACTCATTCACGTAGATCCGTCCTACGTCTGACGTCGCATGGAGCTTGGACATTTGGGTCAATCCAACATTGAGCAGAATGTCCAAATGCTCGAAGTTCAACCGACACCCATGTAGACATAAGATATGGAGCTTTGGATGGGGGCTCAACCCCAAGCTCAAGCTCTATCTTATAGTTGATGGCTCTACAGAGAGAGAGTTTTGGGTAACTCTGGAGGCGTTACATCATCGTTATCCCCAAGAACTCTAGCCACAAAGTTGGGGATTTCCTCAGACTTATCTAGATTAATCTCAATCAAGGCGGCAAGGTAGGACAAAGCAGACGTTTCTATATAGATTTTTTATTTCACCATATGCACATATATTTTTTAAATAAATAATTAAAGATCATGTGTCCTCAAACTTGTCCGTGACCTACTCTTTCAGAAATCAACATTTCACCGTGTTCACAATATGTTAAATTCATGTCCCATGTTTGTGTCCATGCTTCTTCTGATGTAAGTTTCTCATATTTGCTTGTATACACGCCAACTTTGAGAAATCCAAGGGAAACATCGGATAAGAATAGTTTTTTGCCATCTGGCAGTGTAATTAAGACCTGCAGAAAATTCTTGCTCAAATATCTGCTTTTAGGCACTGCTCTTTTTCTGGTCCTCTATTTTTTTTAATTACATTTACCAAAAATCCAAAATCTTTTATTTCCTCTGACGTTTCCTTTGCTGATTGTGTTCGAAGATTGATACTGGAGATGATGAAGAGTCAGAGAATTCAGATTCAGAATGTCATCGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTTCCTTCAAATCCTAACGAATGTATTTCTCTCCTCTTTTTTGTTTGATTGTGAAATGTTATTGGAATGTAGAATAATACCTTTAATTTTTTATTTAAATTTTTTTGCTATAGTAGAAACTATGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAACCCTGAACCAACTGGAGGTTAGTTCACTTCCATAATGGACTTCGGTTTCTATTTTCATACAAGTAGTTGGTTTTTGGGTATGAACTGCCTGCTTTCTTCAGATGAAGAAGAAGAGCACAACTGGTTTTTTAGTGCTGATCAGTTGGAAGCGATGCCAGGTATGGAGTCGAATAGATTGTACAATTCTTTTACATCGCCACTTTTAGAGATGATATAAAATTCATCTTCTGTAATATTTAGGACTCTCAGTATCAGGAGATGACGAAGAACAATTCTCCGCTACTCCAGTAAACTCAATCGGCCACTCAAATGGTGATCATGATCAACTAGCTCGCACGGTGCTTCAGGTATGTTCATGAACGCACATTCTATCTTGTAAAGCATTTCATCAGAAAACTCAATGAACGCATATTCTATTTCTTTTGTTTTTGGCCTTTTTCTTTCTATTGGTTTTCTGACTGCTTTTTGTTGCATAATCTTTAGCTTCAAATCAACGATCAGCGTTTTGACGATGCAGAAGAGATGGAACCCGAAAGCAATGGTAAGCATAGTTGAGCTTGTGCCTTAAGAAGTAAATCGACCTCTTATGCCTTGAATTCCCTGTTGTACAACTAAACCTAAACACCTGCTGTATATGCAATTTTTGTGTTCCACATCAACAGATTAAGCTTTTAGGCACCTAGTTTTTCTTTGTAGTTTATACTTGCCTGCTCAATGACTTTCTAGTGTTTGAATACTTGAATCCTCATCCTGAAGTGAGTTTGGATTATGTTGTGTTTGGTTTTTAATATTTTAAGAGTAGTTTGACAACTTGTTTGTTTTTCACTTTCTGAAATGGTTGTAACTTGTAATGGTTGTAAGTGAATTAAAGAAAAAAAAAGGTTTATGTTT

mRNA sequence

AGAAAAGAAATGGAAGGATAAGAAAAGAGGTTAATCGAAAAAGGCGTCAGTAGAAAGAGTATGAGGGTTTTAGACAATCGCAAACTCCCAATTTCAGTGATCAAGAGATAGAGAGAGTTGAAGAATTAGGGTTTTAGACAGAATGGCAATGGGACTAAGGCCTTACAACGAGAGAACGGGGAATGGCTTGGGATTACCAGCTTTCGACGTTAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTATTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTAGACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTTTGTATGTTCAGATTGATACTGGAGATGATGAAGAGTCAGAGAATTCAGATTCAGAATGTCATCGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTTCCTTCAAATCCTAACGAATTAGAAACTATGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAACCCTGAACCAACTGGAGATGAAGAAGAAGAGCACAACTGGTTTTTTAGTGCTGATCAGTTGGAAGCGATGCCAGGACTCTCAGTATCAGGAGATGACGAAGAACAATTCTCCGCTACTCCAGTAAACTCAATCGGCCACTCAAATGGTGATCATGATCAACTAGCTCGCACGGTGCTTCAGCTTCAAATCAACGATCAGCGTTTTGACGATGCAGAAGAGATGGAACCCGAAAGCAATGGTAAGCATAGTTGAGCTTGTGCCTTAAGAAGTAAATCGACCTCTTATGCCTTGAATTCCCTGTTGTACAACTAAACCTAAACACCTGCTGTATATGCAATTTTTGTGTTCCACATCAACAGATTAAGCTTTTAGGCACCTAGTTTTTCTTTGTAGTTTATACTTGCCTGCTCAATGACTTTCTAGTGTTTGAATACTTGAATCCTCATCCTGAAGTGAGTTTGGATTATGTTGTGTTTGGTTTTTAATATTTTAAGAGTAGTTTGACAACTTGTTTGTTTTTCACTTTCTGAAATGGTTGTAACTTGTAATGGTTGTAAGTGAATTAAAGAAAAAAAAAGGTTTATGTTT

Coding sequence (CDS)

ATGGCAATGGGACTAAGGCCTTACAACGAGAGAACGGGGAATGGCTTGGGATTACCAGCTTTCGACGTTAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTATTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTAGACATGGCAAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTTTGTATGTTCAGATTGATACTGGAGATGATGAAGAGTCAGAGAATTCAGATTCAGAATGTCATCGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTTCCTTCAAATCCTAACGAATTAGAAACTATGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAACCCTGAACCAACTGGAGATGAAGAAGAAGAGCACAACTGGTTTTTTAGTGCTGATCAGTTGGAAGCGATGCCAGGACTCTCAGTATCAGGAGATGACGAAGAACAATTCTCCGCTACTCCAGTAAACTCAATCGGCCACTCAAATGGTGATCATGATCAACTAGCTCGCACGGTGCTTCAGCTTCAAATCAACGATCAGCGTTTTGACGATGCAGAAGAGATGGAACCCGAAAGCAATGGTAAGCATAGTTGA

Protein sequence

MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHNWFFSADQLEAMPGLSVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKHS

Homology

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BLAST of Lsi09G005460 vs. Swiss-Prot
Match: ICLN_ARATH (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.6e-69
Identity = 138/236 (58.47%), Postives = 172/236 (72.88%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +  RT +G G P  D + GE LMH+  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSDVDMAKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+  +DE+ E SDS    E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDEDDE-SDS----ESTEV 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEE--HNWFFSADQLEAMPG 180
           LDL+ +REMRLVPS+  +LET+F++FC+CAELNPEP  +EEEE  HNW FSADQ++   G
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 LSVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGK 235
                D E Q S +P + IGHSNGD + L + +L+LQINDQRF+DAEEM  ES  K
Sbjct: 181 ---DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETK 227

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BLAST of Lsi09G005460 vs. Swiss-Prot
Match: ICLN_MOUSE (Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 43/117 (36.75%), Postives = 73/117 (62.39%), Query Frame = 1


Query: 49  GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESEN 108
           GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AYP   LYV ++    EES+ 
Sbjct: 35  GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKLGEESKE 94

Query: 109 SDSECHREESENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHN 166
             S+   +E +N D+  + E R VPS+ + LE MF   C+C  L+P+P  ++ ++++
Sbjct: 95  PPSD--EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

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BLAST of Lsi09G005460 vs. Swiss-Prot
Match: ICLN_RAT (Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 43/117 (36.75%), Postives = 73/117 (62.39%), Query Frame = 1


Query: 49  GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESEN 108
           GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AYP   LYV ++    EES+ 
Sbjct: 35  GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMVNARFGEESKE 94

Query: 109 SDSECHREESENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHN 166
             S+   +E +N D+  + E R VPS+ + LE MF   C+C  L+P+P  ++ ++++
Sbjct: 95  PFSD--EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

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BLAST of Lsi09G005460 vs. Swiss-Prot
Match: ICLN_CANLF (Methylosome subunit pICln OS=Canis lupus familiaris GN=CLNS1A PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.2e-15
Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 49  GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESEN 108
           GTLYI+  ++ WL    +  G+++++ ++SLHAVS D  AYP   LYV ++    EES+ 
Sbjct: 35  GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDLNAYPREHLYVMVNAKFGEESKE 94

Query: 109 SDSECHREESENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHN 166
           S +E   EE  + D+  + E R VPS+ + LE MF   C+C  L+P+P  ++ ++++
Sbjct: 95  SVAE---EEDSDDDVEPIAEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYD 146

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BLAST of Lsi09G005460 vs. Swiss-Prot
Match: ICLN_RABIT (Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 9.4e-15
Identity = 41/117 (35.04%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 49  GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESEN 108
           GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AYP   LYV ++    EES+ 
Sbjct: 35  GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKFGEESKE 94

Query: 109 SDSECHREESENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHN 166
             ++   EE  + D+  + E R VP + + LE MF   C+C  L+P+P  ++ ++++
Sbjct: 95  LVAD--EEEDSDDDVEPISEFRFVPGDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

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BLAST of Lsi09G005460 vs. TrEMBL
Match: A0A0A0KPP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.9e-118
Identity = 210/236 (88.98%), Postives = 223/236 (94.49%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPY +RTGNGLG P+FDV+QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEE ENSDSECH EESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAMPGL 180
            DLAAVREMRLVPSNPNELET+FEIFCQCAELNPEPTGD EEEEHNWFF ADQLE MPGL
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKH 236
           SV+GDDEEQFS+ P +SIGHSNGDHDQLARTVLQLQIND+RF+DA+EMEPE+NGKH
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 236

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BLAST of Lsi09G005460 vs. TrEMBL
Match: B9I4K9_POPTR (Nucleotide-sensitive chloride conductance regulator family protein OS=Populus trichocarpa GN=POPTR_0012s14450g PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.4e-75
Identity = 152/238 (63.87%), Postives = 177/238 (74.37%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA GLR + ER G+G G P  D   GE  M +   V IV  N  PE PGTLYIS+++VVW
Sbjct: 1   MAPGLRQFTERRGDGAGQPVIDTENGEEFMLMCREVSIVIGNGSPESPGTLYISTKKVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDE-ESENSDSECHREESE 120
           LSDVD  KGYAVDFLS+SLHAVS DPEAYPSPC+Y QI+TG+DE ESE SDSEC    S+
Sbjct: 61  LSDVDGTKGYAVDFLSISLHAVSRDPEAYPSPCIYTQIETGEDEDESEGSDSEC----SD 120

Query: 121 NLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHNWFFSADQLEAMPGL 180
            LDL+ V EMRLVPS+P++L+T+F++FC+CAELNPEP  D EEEHNW FSADQL      
Sbjct: 121 ALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEEHNWIFSADQLS--DET 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEM--EPESNGKH 236
           +   D E  FS  P +SIGHSNGDHD LARTVL+LQIND RF+DAEEM  E ES G+H
Sbjct: 181 AEVEDSEWNFSQNPTSSIGHSNGDHD-LARTVLELQINDHRFEDAEEMEHEHESKGRH 231

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BLAST of Lsi09G005460 vs. TrEMBL
Match: A0A061G066_THECC (Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=Theobroma cacao GN=TCM_047012 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.1e-74
Identity = 147/237 (62.03%), Postives = 177/237 (74.68%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +  R GNG G P  D +  E L+H+ P+V I   NR PE PGTLYI+++QV+W
Sbjct: 1   MVIGLRQFMARVGNGAGEPVLDTDNVEELVHVQPSVSIALGNRAPESPGTLYITTKQVIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEE-SENSDSECHREESE 120
           LSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+T  DE+ SE+SDSEC+    E
Sbjct: 61  LSDVDSAKGYAVDFLSLSLHAVSRDPEAYHSPCIYTQIETEADEDVSEDSDSECN----E 120

Query: 121 NLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHNWFFSADQLEAMPGL 180
            LDL+ V EMRL+PS+ ++L+T+F++FC+CAELNPEP   EEE HNW FSADQLE     
Sbjct: 121 VLDLSKVTEMRLIPSDASQLDTLFQMFCECAELNPEPIEGEEEGHNWVFSADQLEDE--- 180

Query: 181 SVSGDDEE-QFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKH 236
           +  GDD E  F   P NSIGHSNGDHD LARTVL+LQINDQRF+DAEE E  S+  H
Sbjct: 181 AAEGDDSEWHFPQNPTNSIGHSNGDHD-LARTVLELQINDQRFEDAEEFEQVSDSSH 229

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BLAST of Lsi09G005460 vs. TrEMBL
Match: M5X213_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73
Identity = 151/236 (63.98%), Postives = 178/236 (75.42%), Query Frame = 1


Query: 1   MAMGLRPYNERTG-NGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVV 60
           M  GLR +  R   NG+  P  D   GE LMH+ P V IV  NRPPE PGTLYIS+++VV
Sbjct: 1   MVAGLREFTARVERNGVDEPVLDAENGEELMHVQPCVSIVLGNRPPESPGTLYISTKKVV 60

Query: 61  WLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDE-ESENSDSECHREES 120
           WLSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+T DDE ES+ SDSEC+    
Sbjct: 61  WLSDVDRAKGYAVDFLSISLHAVSRDPEAYTSPCIYTQIETEDDEHESDGSDSECNGV-- 120

Query: 121 ENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHNWFFSADQLEAMPG 180
             LDL+ + EMRLVPS+PN+L+++FE+FC+CAELNPEP  +EEEEHNW FSADQLE    
Sbjct: 121 --LDLSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPIEEEEEEHNWIFSADQLED--- 180

Query: 181 LSVSGDDEE-QFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNG 234
              +G+D E   S  P  SIG SNGDHD LARTVL+LQINDQRF+DAEEME E++G
Sbjct: 181 -DATGEDSEWHVSENP--SIGQSNGDHD-LARTVLELQINDQRFEDAEEMEHENDG 225

[Close]

BLAST of Lsi09G005460 vs. TrEMBL
Match: A0A0D2PW21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.9e-73
Identity = 146/240 (60.83%), Postives = 181/240 (75.42%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA+GLR +  R GNG G P  D + GE L+H+ P+V +   +R PE PGTLYI++RQV+W
Sbjct: 1   MAVGLRHFTARAGNGSGEPILDTDNGEELVHVQPSVSVAVGDRAPESPGTLYITTRQVIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDE---ESENSDSECHREE 120
           LS++D  KGYAV FLS+SLHAVS DPEAYPSPC+Y QI+T  DE   ESE+SDSEC    
Sbjct: 61  LSELDREKGYAVYFLSLSLHAVSRDPEAYPSPCIYTQIETEADEVEDESEDSDSEC---- 120

Query: 121 SENLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAM 180
           SE LDL+ +REMR +PS+ N+L+T+F++FC+CAELNPEP  + EEE HNW FSADQLE  
Sbjct: 121 SEVLDLSKIREMRFIPSDANQLDTLFQVFCECAELNPEPIEEGEEEGHNWIFSADQLEDE 180

Query: 181 PGLSVSGDDEE-QFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKH 236
            G   +GDD E  FS  P N+IGHSNG HD LA +VL+LQINDQRF+DAEEME +S+  H
Sbjct: 181 AG---AGDDVEWHFSQNPTNTIGHSNGHHD-LASSVLELQINDQRFEDAEEMEQDSDTGH 232

[Close]

BLAST of Lsi09G005460 vs. TAIR10
Match: AT5G62290.1 (AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein)

HSP 1 Score: 261.9 bits (668), Expect = 3.7e-70
Identity = 138/236 (58.47%), Postives = 172/236 (72.88%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +  RT +G G P  D + GE LMH+  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSDVDMAKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+  +DE+ E SDS    E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDEDDE-SDS----ESTEV 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEE--HNWFFSADQLEAMPG 180
           LDL+ +REMRLVPS+  +LET+F++FC+CAELNPEP  +EEEE  HNW FSADQ++   G
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 LSVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGK 235
                D E Q S +P + IGHSNGD + L + +L+LQINDQRF+DAEEM  ES  K
Sbjct: 181 ---DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETK 227

[Close]

BLAST of Lsi09G005460 vs. NCBI nr
Match: gi|449451805|ref|XP_004143651.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 2.7e-118
Identity = 210/236 (88.98%), Postives = 223/236 (94.49%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPY +RTGNGLG P+FDV+QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEE ENSDSECH EESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAMPGL 180
            DLAAVREMRLVPSNPNELET+FEIFCQCAELNPEPTGD EEEEHNWFF ADQLE MPGL
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKH 236
           SV+GDDEEQFS+ P +SIGHSNGDHDQLARTVLQLQIND+RF+DA+EMEPE+NGKH
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 236

[Close]

BLAST of Lsi09G005460 vs. NCBI nr
Match: gi|659073126|ref|XP_008467268.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 5.0e-117
Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR Y ERTGNGLGLP+FDV+QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEE ENSDSECH EESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAMPGL 180
            DL AVREMRLVPSNPNELET+FEIFCQCAELNPEP GD EEEEHNWFF ADQLE MPGL
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPE-SNGKHS 237
           SV+GDDEEQFS+ P +SIG+SNGDHDQLARTVLQLQINDQRF+DAEEMEPE +NGKHS
Sbjct: 181 SVAGDDEEQFSSIPPSSIGNSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKHS 238

[Close]

BLAST of Lsi09G005460 vs. NCBI nr
Match: gi|778700509|ref|XP_011654882.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 4.7e-115
Identity = 207/236 (87.71%), Postives = 220/236 (93.22%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPY +RTGNGLG P+FDV+QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEE ENSDSECH EESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAMPGL 180
            DLAAVREMRLVPSNPNELET+FEIFCQCAELNPEPTGD EEEEHNWFF ADQLE MP  
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP-- 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPESNGKH 236
            V+GDDEEQFS+ P +SIGHSNGDHDQLARTVLQLQIND+RF+DA+EMEPE+NGKH
Sbjct: 181 -VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 233

[Close]

BLAST of Lsi09G005460 vs. NCBI nr
Match: gi|659073128|ref|XP_008467269.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 8.8e-114
Identity = 207/238 (86.97%), Postives = 220/238 (92.44%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR Y ERTGNGLGLP+FDV+QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEESENSDSECHREESEN 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEE ENSDSECH EESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGD-EEEEHNWFFSADQLEAMPGL 180
            DL AVREMRLVPSNPNELET+FEIFCQCAELNPEP GD EEEEHNWFF ADQLE MP  
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMP-- 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEMEPE-SNGKHS 237
            V+GDDEEQFS+ P +SIG+SNGDHDQLARTVLQLQINDQRF+DAEEMEPE +NGKHS
Sbjct: 181 -VAGDDEEQFSSIPPSSIGNSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKHS 235

[Close]

BLAST of Lsi09G005460 vs. NCBI nr
Match: gi|743856664|ref|XP_011029973.1| (PREDICTED: chloride conductance regulatory protein ICln-like [Populus euphratica])

HSP 1 Score: 288.9 bits (738), Expect = 8.1e-75
Identity = 151/238 (63.45%), Postives = 178/238 (74.79%), Query Frame = 1


Query: 1   MAMGLRPYNERTGNGLGLPAFDVNQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA GLR + ER G+G G P  D + GE LM +   V IV  N  PE PGTLYIS+++V+W
Sbjct: 1   MAPGLRQFTERRGDGAGQPVIDTDNGEELMLMFREVSIVIGNGSPESPGTLYISTKKVLW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDE-ESENSDSECHREESE 120
           LSDVD  KGYAVDFLS+SLHAVS DPEAYPSPC+Y QI+TG+DE ESE SDSEC    S+
Sbjct: 61  LSDVDRTKGYAVDFLSISLHAVSRDPEAYPSPCIYTQIETGEDEDESEGSDSEC----SD 120

Query: 121 NLDLAAVREMRLVPSNPNELETMFEIFCQCAELNPEPTGDEEEEHNWFFSADQLEAMPGL 180
            LDL+ V EMRLVPS+P++L+T+F++FC+CAELNPEP  D EEEHNW FSADQL      
Sbjct: 121 ALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEEHNWIFSADQL--ADET 180

Query: 181 SVSGDDEEQFSATPVNSIGHSNGDHDQLARTVLQLQINDQRFDDAEEM--EPESNGKH 236
           +   D E  FS  P +SIGHSNGDHD L RTVL+LQIND RF+DAEEM  E ES G+H
Sbjct: 181 AEVEDSEWNFSQNPTSSIGHSNGDHD-LVRTVLELQINDHRFEDAEEMEHEHESKGRH 231

The following BLAST results are available for this feature:

BLAST of Lsi09G005460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ICLN_ARATH	6.6e-69	58.47	Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g6229...	[more]
ICLN_MOUSE	2.2e-16	36.75	Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1	[more]
ICLN_RAT	3.8e-16	36.75	Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1	[more]
ICLN_CANLF	7.2e-15	36.75	Methylosome subunit pICln OS=Canis lupus familiaris GN=CLNS1A PE=1 SV=1	[more]
ICLN_RABIT	9.4e-15	35.04	Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2	[more]

BLAST of Lsi09G005460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPP2_CUCSA	1.9e-118	88.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1	[more]
B9I4K9_POPTR	7.4e-75	63.87	Nucleotide-sensitive chloride conductance regulator family protein OS=Populus tr...	[more]
A0A061G066_THECC	8.1e-74	62.03	Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=The...	[more]
M5X213_PRUPE	1.4e-73	63.98	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1	[more]
A0A0D2PW21_GOSRA	6.9e-73	60.83	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1	[more]

BLAST of Lsi09G005460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62290.1	3.7e-70	58.47	nucleotide-sensitive chloride conductance regulator (ICln) family pr...	[more]

BLAST of Lsi09G005460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451805\|ref\|XP_004143651.1\|	2.7e-118	88.98	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sati...	[more]
gi\|659073126\|ref\|XP_008467268.1\|	5.0e-117	88.24	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo...	[more]
gi\|778700509\|ref\|XP_011654882.1\|	4.7e-115	87.71	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sati...	[more]
gi\|659073128\|ref\|XP_008467269.1\|	8.8e-114	86.97	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo...	[more]
gi\|743856664\|ref\|XP_011029973.1\|	8.1e-75	63.45	PREDICTED: chloride conductance regulatory protein ICln-like [Populus euphratica...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0034715	pICln-Sm protein complex
GO:0034709	methylosome
GO:0005886	plasma membrane
GO:0005829	cytosol

Vocabulary: **Biological Process**
Term	Definition
GO:0006884	cell volume homeostasis
GO:0006821	chloride transport
GO:0000387	spliceosomal snRNP assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR003521	ICln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006884	cell volume homeostasis
biological_process	GO:0006821	chloride transport
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0034709	methylosome
cellular_component	GO:0034715	pICln-Sm protein complex
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G005460.1	Lsi09G005460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003521	ICln	PRINTS	PR01348	ICLNCHANNEL	coord: 69..83 score: 7.4E-6coord: 124..136 score: 7.4E-6coord: 46..61 score: 7.
None	No IPR available	PANTHER	PTHR21399	CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN	coord: 1..233 score: 5.5
None	No IPR available	PFAM	PF03517	Voldacs	coord: 49..168 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G005460	Csa5G171150	Cucumber (Chinese Long) v2	culsiB322
Lsi09G005460	CSPI05G08040	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G005460	Cucsa.115660	Cucumber (Gy14) v1	cgylsiB162
Lsi09G005460	CmaCh02G010130	Cucurbita maxima (Rimu)	cmalsiB531
Lsi09G005460	CmoCh02G010280	Cucurbita moschata (Rifu)	cmolsiB517
Lsi09G005460	Cla003570	Watermelon (97103) v1	lsiwmB031
Lsi09G005460	MELO3C005412	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G005460	ClCG01G005160	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G005460	MELO3C005412.2	Melon (DHL92) v3.6.1	lsimedB013
Lsi09G005460	Cla97C01G005390	Watermelon (97103) v2	lsiwmbB007
Lsi09G005460	Bhi12G000514	Wax gourd	lsiwgoB010
Lsi09G005460	Cp4.1LG05g07110	Cucurbita pepo (Zucchini)	cpelsiB583
Lsi09G005460	CsGy5G005430	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G005460	Carg08464	Silver-seed gourd	carlsiB648

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G005460	Silver-seed gourd	carlsiB943
Lsi09G005460	Cucumber (Chinese Long) v3	cuclsiB345
Lsi09G005460	Cucurbita maxima (Rimu)	cmalsiB261
Lsi09G005460	Cucurbita moschata (Rifu)	cmolsiB248
Lsi09G005460	Cucurbita pepo (Zucchini)	cpelsiB133