Cla003570 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003570
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nucleotide-sensitive chloride conductance regulator (AHRD V1 ***- D2U835_9ROSI); contains Interpro domain(s) IPR003521 Nucleotide-sensitive chloride conductance regulator
Location	Chr1 : 4963570 .. 4969883 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGTACCTTCTTTCTCCTTTTTTCTCTCATTGCCCGCGTTTTCGCTTCATTTTGTTTGACACTCTCTGTTTTAGTGTTTCATCCATTGATCCATAGGGCCAATTGTAAGAAAATTTTGGGAATTAGAGTCCCTTTTGTGTGGGGAGCTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTAAAAAAGTTGATTTTATGTTAAGCGAGGGGAGGGGCGTGTTGTGTTTTTCTTTTGTAAATGAAGGCCGTTTCTAAATCTTGGAATGAATAGCGTACTGAATTTGGTAATGAAATGATCACTTGTGAGAATTTGATTGATGATGCGAGTATGAGAAAGTTTAGAGGATTGGGAGAACCCCTAAGCTAAAGGAAATTAACACAAAAGGGGAAAATGCCATGGAAAGTGTTGCTTGCAGTTGAAACAGGGTGGAAAGAGGTACATTCCTTTGGCGCCATTGTTTAAGGCTCAGAAAAGTATGATTTCTTATCTATCCTGTTTTATGTGCTTCCGTTCTTGGTGAGAGGTCTTCATTTTCTACATGTGGCTTTCCCTCAACAGTCAACACAACAGTTTCTGTCTTTTTCAATGATTTTTTGGTTATTTCTTTCGATATAATGTTAGACTTTGAAGGTAGTTGCTATATAGGCTTGCAATTGGGAAATTAGGATAGAAAGGACCTCTGCAAAATGTGGCTAGTGGAGAACAAGATATTTGGGAGTTTGTCCATGCTCCATGGCCAAGTGTGTTCGGACTTCTAAGTTCTTTGTAAGCTCTTTTGTAGGTATCATATACCTTTTTAAGTTAAAGCCAATTAAATGGACTTCTTGTAACCTCATTGGCTTTTTGGCCAATTTCTTATCACCCTCTTTTGAATTTTTGTTTCTTGTACTATGTCCCTGTTAGAAAAGGATAACATGAAGAACCTTTTTTTTTTTTTAAACTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTATACTTCGATTTTTTTTATGATAAGCTGATTGTTCCCTGCATTTCTTTCCATGAGAAACTAGTATTTCTTGAGACCGTGCTACTATAAAATGCATGTTTGCTGGTTCTCTCCTTCTGTAGTGGCCATGTGGGTATTCTTGTTCTGTCGAATGAAAGTTCCATGAAAGTTCCTTGGTTAGTTTTGTCATTTGTATGTTGGTGTAGGAAACTTATATGTTCATTTTATAGAAAACTTATGATTGAGAACTTCCCTTGAGCTCTCCTTTTCCCCTTGGAAGATAAGGGTAGGGTTTTGTGGCATGGCCCTTTTGTGGGGTATTTGGCTGGAGAGGAACATTAGGATTCTTAAAGGGGTGAAGAGACCTTTGAGGAGGTGTGGGAGGTTATTAGGTTTAGTGTATCTTTATGGGTGCTCCTTCGTTTACTTTTTGTAATTATCAGCTCAGCTTGGTTGGATTCTTTTGAGTCGGGAGTTTCTTCTTGACGTTAGTGTTGAGATTCTTTTTCTGGGATTCTTTTTTTTGTAAGTTCTTGTACAATCTTTCATTCTTGTCCATATGAAAGGTTAGTTTCTAACTATATATGTCTTAATTGTCTACTATTTAATCGAATGTCCTACAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAACTAATAGACTAAATTGTTGACTCGTTGAGAAATTGAACATGTTTATAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGGTATATACTGGAGTAGTTTTACATTATTGATCATTAATGTTGTATAGTTAAACAGATTCATGGTGTCGTTGTTTTTGGCTTAAACTTCTAGTTTTCTTTTGGTTAGTGTCCTAGCATCATCTTATACAAAGCCTACTGAAACTATTTGGTGGTTTTGTTAACTTGAGACATAAGATTTTGAGCAGCGTAACTTTAGCAATTGAAGAAAGATCATTGCTATAAATTTTATATTATGAGAACAATGAAATAAATGTGAGGTTAAAATTGTATTTTTTGAGTTCAAGGACGTGGGGGGGTGGTGATTCGAATATTTGACCTCTTGGTCGAGAGTACATACCTTAACCAATTGAAGTATGCTTAGGTTGGTGGTTAAAATACTATTTTAGCCCCAACATTTTCAGATTTATTTCATTTTAGCCCCTACATTTCTAAATGTCCAATTTACACCTAGTAAATAGTTCCCACTATTTGTCTGAGGTTAATTTCCATCAAACTTAGCAATGGAAAAAAAAAAAAAAAAGGAGGGCACAATGTGAATATGTTATTAGAGTTTCTAGAGGAAAGGTCGAATGAGGAGGATTCATTAGAAAAAAAGAGTATGGATTGAGAGGTGTGAATTCAAATTATTAGGTGTTTTTATCCAACAAGATTCAGGCTTAGTAGAGGTAGAGTTGCACAGATATTGATGAGGAACGATTGTGGATGTTAGGGAGATTAGTCTCATGAGGGTGATGTGACCACGAAAATGCAAGAACCAAACTCTGTAGAAGAATCACCATTTGAAGAGCAAAGGTGGAAAGATGAATCCCCATCTTAAAGACCACTATTTGATGAGTGTAGAAGCTCATACAAGGGAAGAAAGGAGATCCTATGGATGCTGAAGTGGGATGCAAACATTGAGGAGAAGGACTCAGGAGATTGGGGGATCGAATCGAAAATACTAACTAAGAAGGCTCAATTACATTAGAGGGGGAATTAATGTATGGTGAGGCAAAAGTTAACAGGGGTTTAAAAACCTTGCAATAAAGAAATTTAATTTTGGTAGGGATGGTGTTTGAGGCTATTAGGGTTGAATTTTGGAGAGATACAGTTGATAGCTGCCTGTTATGTGGTGGGAGACAAAGACATGGTGGAGGCAAAGCTTCTTCAGTTGCAAATTTCACACAGGTGTGAGGTATGGTTACACTCTCAAGCCTTTGAAGCTGTGGAATTTCAATATAATTGTCTGGGCCAAAACTACGATGAATTTTGAGGCTTTGGCCAACACAAAGAAAAAATGTGGGTTGAGGGTGAGTAAGCCTATAACTGAGGCAAAATATAAGGTTTGTGATACAACAATTTCAACAAGAGCAATTGAGATGTGTGCATCTCCTGAGCCTCAAGTTTCTCTCTCTCATTGTAGCTCTACTATGTACTTTGAGCATTAGTCTCATTTCATTAATTCAATTAATATAGGTTGGTTTCCATTCCAAAAAGAACAATTTCAATTGGAGTAATTATCAAGGGCTGGTTGGACAGCAACAACATGTTAAAATACAACCTGCAGGATTTTTTAAGAGCAAATTGTGAAAATCTTTAGTACAAATTTAAATTGGTATATTCAGATTTTCCAATGTGGATGTGAGGTGGATAGGGGTTTCTCCATTTTGATGTGTTAATAGAAGCGAATGGGGTGGGATTGTAGGAGGCTTCTTGGTGGAATGAATTTGGGACTTGGGGATAGTTTGGCTTTATGATTCATGGTGTGAACAGTTGGGATTTAAGTTGGAATTGGATAGATTTGTAGATTTTTATTTTTTACTTTTCGAATAATAGTGAAGGAATTAGAAGAAAAAAAGAAAAGAGAGAAGTTATAACAAACAGAAAAGTAACTAGAAAAGAAGGCGGCAATCAAAAAATAGAGGACAAAAAAAATAAAAGAAGAATATATATTGTTTTCATTGGTGGGCTTGTTACCCTTAGCATGGGGGCAACTTCCATATATCTTTTTCATTAGTGTATTGTATAATTTTGATTTTTCTTTGGAGAAAATATTGGATCCTTCACACCTTTGAGGACAAGGTATATTTTAATGGTTGGGTAATGTTAGGCCATTAGGATAAATGTTAAGGGCAGATTAGCAATCAACTAACAAGTTTGTTAGTAGGAGCCTGGAGGTGGTTACAATTGGATAGGGTGGGTGAGAACCATGAAATCAAGCAATCTTGTGGTTGTTTAGGCTTGAGTTTACTCAGGAGACAGGTGCAAACACTTAGATTTGGGAGCAAGGCTCCAAGTCAAAATATCTCCTTGAAGGTGGAGGAGACTTGGAAAACCTTCTATAATTAGCTAGTCAAAACTTGGTCCCAAGTTTAGGAAGGTTGGTTTATTAATTATAGGAGTGTGTGACTTGGGCTTCCTTGAAAAGTGGAGACTTTATTTATAGCTTGTATAATGTAAGTGTGGGAGAACTCCAACTTGTGGAAGCATCCCATTCTTCACACATCACTCTCTCTTGTGTAAACTAGACAAGGTGGAACACGAGAGCAAAGCATGCATCCATTCCACCCTCGAGTGTCCAACCCATTTAGATGGGTCATGCAGACATGCTTCAACTCCTTTCTTAGCCCGCTGACTAGGTAATAGGAGTCTCCTTCCCTTTGTATAGATCAGTTCGAACGATATTACAAGGAATTCATAGGCACCATATCTAGTCACACATGTACTCTACCTCCTGTCCCCCTCTACGATTCTCACATGCTAGTAACCAGACCACAAGCCTAGTTTGGCGAAGAGTGCAGCTTGCAGAAGTAATTGGTCGCATTTGGAATCAGGTCCTTGTTTAGGGCGTTGTAATCTACACACATTCACATAGATCCATCCTATGTCCTCCAAGATAGGATTGGGGCACCATATGAAGCTTTAGACGGCTGGGTCAATCCAGCATTGAGTAGATTGTCCAAATGCTTTCAAAGTTTAACTAACTCCAATGGAGACATGCAATATGGAGCGGGATGAGGGCTTGAGCTCCAGCTCGATTTTATGGTTGATGGCTTTGCAGGGAGAAAGAGTTCTAGGTAACTTTGGAGGCATTGCATCCTCGTTTATCCCCAAGAACCCCAGCCACAACATCAGGCACTTCCGCAAACTTATCTTCATGTTCGGTATATTTTGAAGGGTTAGGTATTTCAACACATAGACACATTTTTTAAAGAATAATTAAAGATCATGTGTCCTAAGCCTGCTACTCTTTCAGAAATCAACATGTCACTGTGTTCATAACATGTTAATGTTCCAAGTCCCATGTATGTGTCCATGCTTCTTAGGATGTAAGTTTCTCATATTTGCTTGTATCCAACTTTGAGAGATCCAAGGGAAACGTTTGATAAGAATAGTTGTTTGCCATCTAGCAGTGTAATTAAGGCTTGCAGAAAATTCTTGCTCAAATATCTGCTCTAGGCACTGCTTTTTTTCTGGTACTTTATTTTTCTTAATTACATTTGCCAAAATCTTTTATTTCTCCTGACGTTTCCTTTGCTGATTGTGTTCGAAGATTGATACTGGAGATGATGAAGAGTCACATAATTCAGATTCAGAATGCCACGGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAAAGAGATGAGGCTTGTACCTTCAAATCCTAACGAATGTATTTCTCTCCTCTTTTTTGTTTCATTGTGAAATGTTATTGGAATGTAGAATAATACCTTTATTATTATTATTATTTTTTCTTTTTCCCATTTGCAATAGTAGAAACTCTGTTCGAGATTTTCTGTCAGTGTGCTGAGCTTAATCCTGAGCCAACTGGAGGTTAGTTCACTTCCATAATGGACTAAGGTTTCTATTTTCGTACAACTAGTTGGTTTTTGGGGTATGAACTACCTGCTTTCTTCAGATGATGAAGAAGAGCACAACTGGTATTTTAGTGCCGATCAGTTGGAAGCAATGCCAGGTATGGAGTCAAATAGATGGTATGATTCTTTTACAGAACCATTTGTTAGAGATGGTATAAAATTCATCTTCTGTAATATTTAGGTCTTTCAGTATCAGGAGATGACGAAGAACAATTCACTGCTACTCCATTAAACTCAATCGGTCACATGAATGGAGATCATGATCAACTAGCTCACACAGTGCTTCAGGTATGTTCATGAACACATATTCTATTTCTTTTGTTTTTGGCCTTTTTCTTTCTATTAGTTCTCTGACTGCTTTTGTTACATAATGTGTAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGA

mRNA sequence

ATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGA

Coding sequence (CDS)

ATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGA

Protein sequence

MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS

Homology

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BLAST of Cla003570 vs. Swiss-Prot
Match: ICLN_ARATH (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +T RT +G G P  D + GE LMH+  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPE 115
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+++ +   ++++    E
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDEDDESDSESTE 114

HSP 2 Score: 36.6 bits (83), Expect = 2.3e-01
Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGK 119
           ++LQINDQRFEDAEEM  ES  K
Sbjct: 205 LELQINDQRFEDAEEMVHESETK 227

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BLAST of Cla003570 vs. TrEMBL
Match: A0A0A0KPP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-46
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+   D   E+ E  + E +G+ S
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDD--EELENSDSECHGEES 118

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BLAST of Cla003570 vs. TrEMBL
Match: A0A0A0KPP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.5e-03
Identity = 20/24 (83.33%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGKH 120
           +QLQIND+RFEDA+EMEPE+NGKH
Sbjct: 213 LQLQINDRRFEDADEMEPENNGKH 236

HSP 2 Score: 148.7 bits (374), Expect = 4.6e-33
Identity = 71/117 (60.68%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +T RTG+G G P  D   GE LMH+ P+V +V  NR  E PGTLYI+SR+++W
Sbjct: 1   MVVGLREFTLRTGDGSGKPVLDEANGEELMHVQPSVAVVLGNRSVESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNG 118
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+++ +   ED +E + ES G
Sbjct: 61  LSDVDMAKGYAVDFLSVSLHAVSRDPEAYSSPCIYTQIEVVED--EDDDESDTESTG 115

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BLAST of Cla003570 vs. TrEMBL
Match: V4KWG2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004861mg PE=4 SV=1)

HSP 1 Score: 35.0 bits (79), Expect = 7.5e+01
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGK 119
           ++LQINDQRF+DAEEM  E+  K
Sbjct: 206 LELQINDQRFDDAEEMVHENEAK 228

HSP 2 Score: 147.9 bits (372), Expect = 7.9e-33
Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA GLR +T+RT + +  P  DA+ GEVLMH  P+V IV  NR PE PGTLYISS+QV+W
Sbjct: 1   MAFGLRIFTQRTSDTIAQPILDADNGEVLMHTQPSVSIVLGNRSPESPGTLYISSKQVIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPE 115
           +SDVD +KGYAVDF+S+SLHAVS DPEAY SPC+Y Q++  D   ED +E E +
Sbjct: 61  VSDVDRSKGYAVDFVSISLHAVSRDPEAYPSPCIYTQIETGDDEEEDEDEDEEQ 114

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BLAST of Cla003570 vs. TrEMBL
Match: A0A0K9RDX5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077430 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 2.8e+02
Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGKHS 121
           +QL INDQ FEDAEEM+ E +  +S
Sbjct: 211 LQLHINDQCFEDAEEMDQEHDKNNS 235

HSP 2 Score: 146.4 bits (368), Expect = 2.3e-32
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +  RTGNG G P  D + GE LM + P+V +   NR  E PGTLYI+SR+++W
Sbjct: 1   MVVGLREFAHRTGNGSGTPVLDESNGEELMRVQPSVAVALGNRSLESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNG 118
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+++ D   E+ +E + +S G
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEDDEDEE-DESDTQSTG 116

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BLAST of Cla003570 vs. TrEMBL
Match: A0A0D3BFU0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 35.4 bits (80), Expect = 5.7e+01
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGK 119
           ++LQINDQRF+DAEEM  ES  K
Sbjct: 208 LELQINDQRFDDAEEMVHESETK 230

HSP 2 Score: 146.4 bits (368), Expect = 2.3e-32
Identity = 68/114 (59.65%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA+GLR + ERTG+G G P  DA+ GEVLMH +P+V IV  NR PE PGTLYISS++V+W
Sbjct: 1   MAVGLRIFAERTGDGAGQPILDADNGEVLMHTLPSVSIVLGNRAPESPGTLYISSKKVIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPE 115
           LSDVD ++GYAVDF+S+SLHAVS D EAY SPC+Y Q++  D   ++ +E E +
Sbjct: 61  LSDVDRSRGYAVDFVSISLHAVSRDIEAYPSPCIYTQIETGDDEGDNEDEDEED 114

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BLAST of Cla003570 vs. NCBI nr
Match: gi|449451805|ref|XP_004143651.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+   D   E+ E  + E +G+ S
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDD--EELENSDSECHGEES 118

[Close]

BLAST of Cla003570 vs. NCBI nr
Match: gi|449451805|ref|XP_004143651.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus])

HSP 1 Score: 48.5 bits (114), Expect = 9.4e-03
Identity = 20/24 (83.33%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGKH 120
           +QLQIND+RFEDA+EMEPE+NGKH
Sbjct: 213 LQLQINDRRFEDADEMEPENNGKH 236

HSP 2 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+   D   E+ E  + E +G+ S
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDD--EELENSDSECHGEES 118

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BLAST of Cla003570 vs. NCBI nr
Match: gi|778700509|ref|XP_011654882.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sativus])

HSP 1 Score: 48.5 bits (114), Expect = 9.4e-03
Identity = 20/24 (83.33%), Postives = 24/24 (100.00%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPESNGKH 120
           +QLQIND+RFEDA+EMEPE+NGKH
Sbjct: 210 LQLQINDRRFEDADEMEPENNGKH 233

HSP 2 Score: 191.8 bits (486), Expect = 6.8e-46
Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR YTERTGNGLGLP+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAY SPCLY+Q+   D   E+ E  + E +G+ S
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDD--EELENSDSECHGEES 118

[Close]

BLAST of Cla003570 vs. NCBI nr
Match: gi|659073126|ref|XP_008467268.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo])

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-02
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPE-SNGKHS 121
           +QLQINDQRFEDAEEMEPE +NGKHS
Sbjct: 213 LQLQINDQRFEDAEEMEPENNNGKHS 238

HSP 2 Score: 191.8 bits (486), Expect = 6.8e-46
Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR YTERTGNGLGLP+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNGKHS 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAY SPCLY+Q+   D   E+ E  + E +G+ S
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDD--EELENSDSECHGEES 118

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BLAST of Cla003570 vs. NCBI nr
Match: gi|659073128|ref|XP_008467269.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo])

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-02
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 96  IQLQINDQRFEDAEEMEPE-SNGKHS 121
           +QLQINDQRFEDAEEMEPE +NGKHS
Sbjct: 210 LQLQINDQRFEDAEEMEPENNNGKHS 235

HSP 2 Score: 148.7 bits (374), Expect = 6.6e-33
Identity = 71/117 (60.68%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +T RTG+G G P  D   GE LMH+ P+V +V  NR  E PGTLYI+SR+++W
Sbjct: 1   MVVGLREFTLRTGDGSGKPVLDEANGEELMHVQPSVAVVLGNRSVESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQLQINDQRFEDAEEMEPESNG 118
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+++ +   ED +E + ES G
Sbjct: 61  LSDVDMAKGYAVDFLSVSLHAVSRDPEAYSSPCIYTQIEVVED--EDDDESDTESTG 115

The following BLAST results are available for this feature:

BLAST of Cla003570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ICLN_ARATH	1.1e-32	56.14	Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g6229...	[more]

BLAST of Cla003570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPP2_CUCSA	1.6e-46	76.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1	[more]
A0A0A0KPP2_CUCSA	6.5e-03	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1	[more]
V4KWG2_EUTSA	7.5e+01	65.22	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004861mg PE=4 SV=1	[more]
A0A0K9RDX5_SPIOL	2.8e+02	60.00	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077430 PE=4 SV=1	[more]
A0A0D3BFU0_BRAOL	5.7e+01	69.57	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cla003570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451805\|ref\|XP_004143651.1\|	2.4e-46	76.67	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sati...	[more]
gi\|449451805\|ref\|XP_004143651.1\|	9.4e-03	83.33	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sati...	[more]
gi\|778700509\|ref\|XP_011654882.1\|	9.4e-03	83.33	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sati...	[more]
gi\|659073126\|ref\|XP_008467268.1\|	1.2e-02	88.46	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo...	[more]
gi\|659073128\|ref\|XP_008467269.1\|	1.2e-02	88.46	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006884	cell volume homeostasis
biological_process	GO:0006821	chloride transport
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0034709	methylosome
cellular_component	GO:0034715	pICln-Sm protein complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005623	cell
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU32784	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU61020	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003570	Cla003570.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU32784	WMU32784	transcribed_cluster
WMU61020	WMU61020	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21399	CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN	coord: 1..113 score: 1.3
None	No IPR available	PFAM	PF03517	Voldacs	coord: 49..114 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003570	Cla97C01G005390	Watermelon (97103) v2	wmwmbB245
Cla003570	Csa5G171150	Cucumber (Chinese Long) v2	cuwmB415
Cla003570	MELO3C005412	Melon (DHL92) v3.5.1	mewmB024
Cla003570	ClCG01G005160	Watermelon (Charleston Gray)	wcgwmB154
Cla003570	CSPI05G08040	Wild cucumber (PI 183967)	cpiwmB424
Cla003570	Cucsa.115660	Cucumber (Gy14) v1	cgywmB171
Cla003570	CmaCh02G010130	Cucurbita maxima (Rimu)	cmawmB575
Cla003570	CmoCh02G010280	Cucurbita moschata (Rifu)	cmowmB569
Cla003570	Lsi09G005460	Bottle gourd (USVL1VR-Ls)	lsiwmB031
Cla003570	Cp4.1LG05g07110	Cucurbita pepo (Zucchini)	cpewmB710
Cla003570	CsGy5G005430	Cucumber (Gy14) v2	cgybwmB388
Cla003570	MELO3C005412.2	Melon (DHL92) v3.6.1	medwmB022
Cla003570	Carg08464	Silver-seed gourd	carwmB0710
Cla003570	Bhi12G000514	Wax gourd	wgowmB087

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003570	Cucurbita maxima (Rimu)	cmawmB280
Cla003570	Cucurbita maxima (Rimu)	cmawmB322
Cla003570	Cucurbita moschata (Rifu)	cmowmB270
Cla003570	Cucurbita pepo (Zucchini)	cpewmB186
Cla003570	Silver-seed gourd	carwmB0875
Cla003570	Silver-seed gourd	carwmB1036
Cla003570	Cucumber (Chinese Long) v3	cucwmB440