ClCG01G005160 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G005160
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Methylosome subunit pICln
Location	CG_Chr01 : 5485601 .. 5494583 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTCAGTAGAAAGAGTACGAGGGTTTTAGAGAATCGACTCCTAATTTCAGTGTTCAAGAGATAGAGAGAGTGAAGAAGAATTAGGGTTTTAGACAAAATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGTACCTTCTTTCTCCTTTTTTCTCTCATTGCCCGCGTTTTCGCTTCATTTTGTTTGACACTCTCTGTTTTAGTGTTTCATCCATTGATCCATAGGGCCAATTGTAAGAAAATTTTGGGAATTAGAGTCCCTTTTGTGTGGGGAGCTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTAAAAAAGTTGATTTTATGTTAAGCGAGGGGAGGGGCGTGTTGTGTTTTTCTTTTGTAAATGAAGGCCGTTTCTAAATCTTGGAATGAATAGCGTACTGAATTTGGTAATGAAATGATCACTTGTGAGAATTTGATTGATGATGCGAGTATGAGAAAGTTTAGAGGATTGGGAGAACCCCTAAGCTAAAGGAAATTAACACAAAAGGGGAAAATGCCATGGAAAGTGTTGCTTGCAGTTGAAACAGGGTGGAAAGAGGTACATTCCTTTGGCGCCATTGTTTAAGGCTCAGAAAAGTATGATTTCTTATCTATCCTGTTTTATGTGCTTCCGTTCTTGGTGAGAGGTCTTCATTTTCTACATGTGGCTTTCCCTCAACAGTCAACACAACAGTTTCTGTCTTTTTCAATGATTTTTTGGTTATTTCTTTCGATATAATGTTAGACTTTGAAGGTAGTTGCTATATAGGCTTGCAATTGGGAAATTAGGATAGAAAGGACCTCTGCAAAATGTGGCTAGTGGAGAACAAGATATTTGGGAGTTTGTCCATGCTCCATGGCCAAGTGTGTTCGGACTTCTAAGTTCTTTGTAAGCTCTTTTGTAGGTATCATATACCTTTTTAAGTTAAAGCCAATTAAATGGACTTCTTGTAACCTCATTGGCTTTTTGGCCAATTTCTTATCACCCTCTTTTGAATTTTTGTTTCTTGTACTATGTCCCTGTTAGAAAAGGATAACATGAAGAACCTTTTTTTTTTTTTAAACTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTATACTTCGATTTTTTTTATGATAAGCTGATTGTTCCCTGCATTTCTTTCCATGAGAAACTAGTATTTCTTGAGACCGTGCTACTATAAAATGCATGTTTGCTGGTTCTCTCCTTCTGTAGTGGCCATGTGGGTATTCTTGTTCTGTCGAATGAAAGTTCCATGAAAGTTCCTTGGTTAGTTTTGTCATTTGTATGTTGGTGTAGGAAACTTATATGTTCATTTTATAGAAAACTTATGATTGAGAACTTCCCTTGAGCTCTCCTTTTCCCCTTGGAAGATAAGGGTAGGGTTTTGTGGCATGGCCCTTTTGTGGGGTATTTGGCTGGAGAGGAACATTAGGATTCTTAAAGGGGTGAAGAGACCTTTGAGGAGGTGTGGGAGGTTATTAGGTTTAGTGTATCTTTATGGGTGCTCCTTCGTTTACTTTTTGTAATTATCAGCTCAGCTTGGTTGGATTCTTTTGAGTCGGGAGTTTCTTCTTGACGTTAGTGTTGAGATTCTTTTTCTGGGATTCTTTTTTTTGTAAGTTCTTGTACAATCTTTCATTCTTGTCCATATGAAAGGTTAGTTTCTAACTATATATGTCTTAATTGTCTACTATTTAATCGAATGTCCTACAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAACTAATAGACTAAATTGTTGACTCGTTGAGAAATTGAACATGTTTATAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGGTATATACTGGAGTAGTTTTACATTATTGATCATTAATGTTGTATAGTTAAACAGATTCATGGTGTCGTTGTTTTTGGCTTAAACTTCTAGTTTTCTTTTGGTTAGTGTCCTAGCATCATCTTATACAAAGCCTACTGAAACTATTTGGTGGTTTTGTTAACTTGAGACATAAGATTTTGAGCAGCGTAACTTTAGCAATTGAAGAAAGATCATTGCTATAAATTTTATATTATGAGAACAATGAAATAAATGTGAGGTTAAAATTGTATTTTTTGAGTTCAAGGACGTGGGGGGGTGGTGATTCGAATATTTGACCTCTTGGTCGAGAGTACATACCTTAACCAATTGAAGTATGCTTAGGTTGGTGGTTAAAATACTATTTTAGCCCCAACATTTTCAGATTTATTTCATTTTAGCCCCTACATTTCTAAATGTCCAATTTACACCTAGTAAATAGTTCCCACTATTTGTCTGAGGTTAATTTCCATCAAACTTAGCAATGGNTTCTTCAATAGCTGCTGCTGATGGATCCATGATTTTGCTAGAAAAGGGATGGAGTTAGGATAATTAGAGAGCGATTTTTGTGGGGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTAAAAAAGTTGATTTTATGTTAAGCGAGGGGAGGGGCGTGTTGTGTTTTTCTTTTGTAAATGAAGGCCGTTTCTAAATCTTGGAATGAATAGCGTACTGAATTTGGTAATGAAATGATCACTTGTGAGAATTTGATTGATGATGCGAGTATGAGAAAGTTTAGAGGATTGGGAGAACCCCTAAGCTAAAGGAAATTAACACAAAAGGGGAAAATGCCATGGAAAGTGTTGCTTGCAGTTGAAACAGGGTGGAAAGAGGTACATTCCTTTGGCGCCATTGTTTAAGGCTCAGAAAAGTATGATTTCTTATCTATCCTGTTTTATGTGCTTCCGTTCTTGGTGAGAGGTCTTCATTTTCTACATGTGGCTTTCCCTCAACAGTCAACACAACAGTTTCTGTCTTTTTCAATGATTTTTTGGTTATTTCTTTCGATATAATGTTAGACTTTGAAGGTAGTTGCTATATAGGCTTGCAATTGGGAAATTAGGATAGAAAGGACCTCTGCAAAATGTGGCTAGTGGAGAACAAGATATTTGGGAGTTTGTCCATGCTCCATGGCCAAGTGTGTTCGGACTTCTAAGTTCTTTGTAAGCTCTTTTGTAGGTATCATATACCTTTTTAAGTTAAAGCCAATTAAATGGACTTCTTGTAACCTCATTGGCTTTTTGGCCAATTTCTTATCACCCTCTTTTGAATTTTTGTTTCTTGTACTATGTCCCTGTTAGAAAAGGATAACATGAAGAACCTTTTTTTTTTTTTAAACTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTATACTTCGATTTTTTTTATGATAAGCTGATTGTTCCCTGCATTTCTTTCCATGAGAAACTAGTATTTCTTGAGACCGTGCTACTATAAAATGCATGTTTGCTGGTTCTCTCCTTCTGTAGTGGCCATGTGGGTATTCTTGTTCTGTCGAATGAAAGTTCCATGAAAGTTCCTTGGTTAGTTTTGTCATTTGTATGTTGGTGTAGGAAACTTATATGTTCATTTTATAGAAAACTTATGATTGAGAACTTCCCTTGAGCTCTCCTTTTCCCCTTGGAAGATAAGGGTAGGGTTTTGTGGCATGGCCCTTTTGTGGGGTATTTGGCTGGAGAGGAACATTAGGATTCTTAAAGGGGTGAAGAGACCTTTGAGGAGGTGTGGGAGGTTATTAGGTTTAGTGTATCTTTATGGGTGCTCCTTCGTTTACTTTTTGTAATTATCAGCTCAGCTTGGTTGGATTCTTTTGAGTCGGGAGTTTCTTCTTGACGTTAGTGTTGAGATTCTTTTTCTGGGATTCTTTTTTTTGTAAGTTCTTGTACAATCTTTCATTCTTGTCCATATGAAAGGTTAGTTTCTAACTATATATGTCTTAATTGTCTACTATTTAATCGAATGTCCTACAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAACTAATAGACTAAATTGTTGACTCGTTGAGAAATTGAACATGTTTATAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGGTATATACTGGAGTAGTTTTACATTATTGATCATTAATGTTGTATAGTTAAACAGATTCATGGTGTCGTTGTTTTTGGCTTAAACTTCTAGTTTTCTTTTGGTTAGTGTCCTAGCATCATCTTATACAAAGCCTACTGAAACTATTTGGTGGTTTTGTTAACTTGAGACATAAGATTTTGAGCAGCGTAACTTTAGCAATTGAAGAAAGATCATTGCTATAAATTTTATATTATGAGAACAATGAAATAAATGTGAGGTTAAAATTGTATTTTTTGAGTTCAAGGACGTGGGGGGGTGGTGATTCGAATATTTGACCTCTTGGTCGAGAGTACATACCTTAACCAATTGAAGTATGCTTAGGTTGGTGGTTAAAATACTATTTTAGCCCCAACATTTTCAGATTTATTTCATTTTAGCCCCTACATTTCTAAATGTCCAATTTACACCTAGTAAATAGTTCCCACTATTTGTCTGAGGTTAATTTCCATCAAACTTAGCAATGGAAAAAAAAAAAAAAAAGGAGGGCACAATGTGAATATGTTATTAGAGTTTCTAGAGGAAAGGTCGAATGAGGAGGATTCATTAGAAAAAAAGAGTATGGATTGAGAGGTGTGAATTCAAATTATTAGGTGTTTTTATCCAACAAGATTCAGGCTTAGTAGAGGTAGAGTTGCACAGATATTGATGAGGAACGATTGTGGATGTTAGGGAGATTAGTCTCATGAGGGTGATGTGACCACGAAAATGCAAGAACCAAACTCTGTAGAAGAATCACCATTTGAAGAGCAAAGGTGGAAAGATGAATCCCCATCTTAAAGACCACTATTTGATGAGTGTAGAAGCTCATACAAGGGAAGAAAGGAGATCCTATGGATGCTGAAGTGGGATGCAAACATTGAGGAGAAGGACTCAGGAGATTGGGGGATCGAATCGAAAATACTAACTAAGAAGGCTCAATTACATTAGAGGGGGAATTAATGTATGGTGAGGCAAAAGTTAACAGGGGTTTAAAAACCTTGCAATAAAGAAATTTAATTTTGGTAGGGATGGTGTTTGAGGCTATTAGGGTTGAATTTTGGAGAGATACAGTTGATAGCTGCCTGTTATGTGGTGGGAGACAAAGACATGGTGGAGGCAAAGCTTCTTCAGTTGCAAATTTCACACAGGTGTGAGGTATGGTTACACTCTCAAGCCTTTGAAGCTGTGGAATTTCAATATAATTGTCTGGGCCAAAACTACGATGAATTTTGAGGCTTTGGCCAACACAAAGAAAAAATGTGGGTTGAGGGTGAGTAAGCCTATAACTGAGGCAAAATATAAGGTTTGTGATACAACAATTTCAACAAGAGCAATTGAGATGTGTGCATCTCCTGAGCCTCAAGTTTCTCTCTCTCATTGTAGCTCTACTATGTACTTTGAGCATTAGTCTCATTTCATTAATTCAATTAATATAGGTTGGTTTCCATTCCAAAAAGAACAATTTCAATTGGAGTAATTATCAAGGGCTGGTTGGACAGCAACAACATGTTAAAATACAACCTGCAGGATTTTTTAAGAGCAAATTGTGAAAATCTTTAGTACAAATTTAAATTGGTATATTCAGATTTTCCAATGTGGATGTGAGGTGGATAGGGGTTTCTCCATTTTGATGTGTTAATAGAAGCGAATGGGGTGGGATTGTAGGAGGCTTCTTGGTGGAATGAATTTGGGACTTGGGGATAGTTTGGCTTTATGATTCATGGTGTGAACAGTTGGGATTTAAGTTGGAATTGGATAGATTTGTAGATTTTTATTTTTTACTTTTCGAATAATAGTGAAGGAATTAGAAGAAAAAAAGAAAAGAGAGAAGTTATAACAAACAGAAAAGTAACTAGAAAAGAAGGCGGCAATCAAAAAATAGAGGACAAAAAAAATAAAAGAAGAATATATATTGTTTTCATTGGTGGGCTTGTTACCCTTAGCATGGGGGCAACTTCCATATATCTTTTTCATTAGTGTATTGTATAATTTTGATTTTTCTTTGGAGAAAATATTGGATCCTTCACACCTTTGAGGACAAGGTATATTTTAATGGTTGGGTAATGTTAGGCCATTAGGATAAATGTTAAGGGCAGATTAGCAATCAACTAACAAGTTTGTTAGTAGGAGCCTGGAGGTGGTTACAATTGGATAGGGTGGGTGAGAACCATGAAATCAAGCAATCTTGTGGTTGTTTAGGCTTGAGTTTACTCAGGAGACAGGTGCAAACACTTAGATTTGGGAGCAAGGCTCCAAGTCAAAATATCTCCTTGAAGGTGGAGGAGACTTGGAAAACCTTCTATAATTAGCTAGTCAAAACTTGGTCCCAAGTTTAGGAAGGTTGGTTTATTAATTATAGGAGTGTGTGACTTGGGCTTCCTTGAAAAGTGGAGACTTTATTTATAGCTTGTATAATGTAAGTGTGGGAGAACTCCAACTTGTGGAAGCATCCCATTCTTCACACATCACTCTCTCTTGTGTAAACTAGACAAGGTGGAACACGAGAGCAAAGCATGCATCCATTCCACCCTCGAGTGTCCAACCCATTTAGATGGGTCATGCAGACATGCTTCAACTCCTTTCTTAGCCCGCTGACTAGGTAATAGGAGTCTCCTTCCCTTTGTATAGATCAGTTCGAACGATATTACAAGGAATTCATAGGCACCATATCTAGTCACACATGTACTCTACCTCCTGTCCCCCTCTACGATTCTCACATGCTAGTAACCAGACCACAAGCCTAGTTTGGCGAAGAGTGCAGCTTGCAGAAGTAATTGGTCGCATTTGGAATCAGGTCCTTGTTTAGGGCGTTGTAATCTACACACATTCACATAGATCCATCCTATGTCCTCCAAGATAGGATTGGGGCACCATATGAAGCTTTAGACGGCTGGGTCAATCCAGCATTGAGTAGATTGTCCAAATGCTTTCAAAGTTTAACTAACTCCAATGGAGACATGCAATATGGAGCGGGATGAGGGCTTGAGCTCCAGCTCGATTTTATGGTTGATGGCTTTGCAGGGAGAAAGAGTTCTAGGTAACTTTGGAGGCATTGCATCCTCGTTTATCCCCAAGAACCCCAGCCACAACATCAGGCACTTCCGCAAACTTATCTTCATGTTCGGTATATTTTGAAGGGTTAGGTATTTCAACACATAGACACATTTTTTAAAGAATAATTAAAGATCATGTGTCCTAAGCCTGCTACTCTTTCAGAAATCAACATGTCACTGTGTTCATAACATGTTAATGTTCCAAGTCCCATGTATGTGTCCATGCTTCTTAGGATGTAAGTTTCTCATATTTGCTTGTATCCAACTTTGAGAGATCCAAGGGAAACGTTTGATAAGAATAGTTGTTTGCCATCTAGCAGTGTAATTAAGGCTTGCAGAAAATTCTTGCTCAAATATCTGCTCTAGGCACTGCTTTTTTTCTGGTACTTTATTTTTCTTAATTACATTTGCCAAAATCTTTTATTTCTCCTGACGTTTCCTTTGCTGATTGTGTTCGAAGATTGATACTGGAGATGATGAAGAGTCACATAATTCAGATTCAGAATGCCACGGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAAAGAGATGAGGCTTGTACCTTCAAATCCTAACGAATGTATTTCTCTCCTCTTTTTTGTTTCATTGTGAAATGTTATTGGAATGTAGAATAATACCTTTATTATTATTATTATTTTTTCTTTTTCCCATTTGCAATAGTAGAAACTCTGTTCGAGATTTTCTGTCAGTGTGCTGAGCTTAATCCTGAGCCAACTGGAGGTTAGTTCACTTCCATAATGGACTAAGGTTTCTATTTTCGTACAACTAGTTGGTTTTTGGGGTATGAACTACCTGCTTTCTTCAGATGATGAAGAAGAGCACAACTGGTATTTTAGTGCCGATCAGTTGGAAGCAATGCCAGGTATGGAGTCAAATAGATGGTATGATTCTTTTACAGAACCATTTGTTAGAGATGGTATAAAATTCATCTTCTGTAATATTTAGGTCTTTCAGTATCAGGAGATGACGAAGAACAATTCACTGCTACTCCATTAAACTCAATCGGTCACATGAATGGAGATCATGATCAACTAGCTCACACAGTGCTTCAGGTATGTTCATGAACACATATTCTATTTCTTTTGTTTTTGGCCTTTTTCTTTCTATTAGTTCTCTGACTGCTTTTGTTACATAATGTGTAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGAGTTTGTGCCTTAAGAAGTAGATTGCCTTCTTATGGATCGAATTTCCTGTTGTACAACTAAACCCCTGCTGTATATGCAATTTTTGTGTTCCACATCAAACAGATTAAGCTTTTAGGCACCTAGTTTTTCTTTGTAGTTTCTACTTGCCTGCTTAATGACTTGCTAGTGTTTGAATATTTGAATCCTCATCCTGAAGTGAGATTGGATTATCTTGTGTTTGTTTTTTCATATTTTAAGAGTAGTTTGGATTACTTGTTTGGTTTTCACTCTCTGAAATGGTTGTAAGTGAATTAAGAAAAAAA

mRNA sequence

CCGTCAGTAGAAAGAGTACGAGGGTTTTAGAGAATCGACTCCTAATTTCAGTGTTCAAGAGATAGAGAGAGTGAAGAAGAATTAGGGTTTTAGACAAAATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGATTGATACTGGAGATGATGAAGAGTCACATAATTCAGATTCAGAATGCCACGGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAAAGAGATGAGGCTTGTACCTTCAAATCCTAACGAATTAGAAACTCTGTTCGAGATTTTCTGTCAGTGTGCTGAGCTTAATCCTGAGCCAACTGGAGATGATGAAGAAGAGCACAACTGGTATTTTAGTGCCGATCAGTTGGAAGCAATGCCAGGTCTTTCAGTATCAGGAGATGACGAAGAACAATTCACTGCTACTCCATTAAACTCAATCGGTCACATGAATGGAGATCATGATCAACTAGCTCACACAGTGCTTCAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGAGTTTGTGCCTTAAGAAGTAGATTGCCTTCTTATGGATCGAATTTCCTGTTGTACAACTAAACCCCTGCTGTATATGCAATTTTTGTGTTCCACATCAAACAGATTAAGCTTTTAGGCACCTAGTTTTTCTTTGTAGTTTCTACTTGCCTGCTTAATGACTTGCTAGTGTTTGAATATTTGAATCCTCATCCTGAAGTGAGATTGGATTATCTTGTGTTTGTTTTTTCATATTTTAAGAGTAGTTTGGATTACTTGTTTGGTTTTCACTCTCTGAAATGGTTGTAAGTGAATTAAGAAAAAAA

Coding sequence (CDS)

ATGGCAATGGGACTAAGGCCTTACACGGAGAGAACAGGAAATGGCTTGGGATTACCAGCTTTCGACGCAAATCAAGGCGAGGTTCTCATGCACATAATGCCCGCCGTCGGCATCGTGTTTGATAATCGGCCTCCCGAGTTTCCTGGCACTCTCTACATATCCTCCAGGCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGGTGGTTTGGTTGAGTGATGTAGACATGGCCAAAGGTTATGCAGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATTCATCTCCTTGTCTGTATATTCAGATTGATACTGGAGATGATGAAGAGTCACATAATTCAGATTCAGAATGCCACGGTGAAGAGTCTGAGAATTTAGACTTAGCTGCAGTTAAAGAGATGAGGCTTGTACCTTCAAATCCTAACGAATTAGAAACTCTGTTCGAGATTTTCTGTCAGTGTGCTGAGCTTAATCCTGAGCCAACTGGAGATGATGAAGAAGAGCACAACTGGTATTTTAGTGCCGATCAGTTGGAAGCAATGCCAGGTCTTTCAGTATCAGGAGATGACGAAGAACAATTCACTGCTACTCCATTAAACTCAATCGGTCACATGAATGGAGATCATGATCAACTAGCTCACACAGTGCTTCAGCTTCAAATCAATGATCAGCGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGTAAGCATAGTTGA

Protein sequence

MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGHMNGDHDQLAHTVLQLQINDQRFEDAEEMEPESNGKHS

Homology

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BLAST of ClCG01G005160 vs. Swiss-Prot
Match: ICLN_ARATH (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-52
Identity = 114/200 (57.00%), Postives = 139/200 (69.50%), Query Frame = 1


Query: 81  AVSTDPEAYSSP-CLYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYI 140
           AV+       SP  LYI   +++WLSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y 
Sbjct: 37  AVALGNRPIESPGTLYITSRKLIWLSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYT 96

Query: 141 QIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEP 200
           QI+  +DE     D E   E +E LDL+ ++EMRLVPS+  +LETLF++FC+CAELNPEP
Sbjct: 97  QIEVEEDE-----DDESDSESTEVLDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEP 156

Query: 201 TGDDEEE--HNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGHMNGDHDQLAHTVLQL 260
             ++EEE  HNW FSADQ++   G     D E Q + +P + IGH NGD + L   +L+L
Sbjct: 157 VQEEEEESGHNWVFSADQMDVRGG---DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLEL 216

Query: 261 QINDQRFEDAEEMEPESNGK 275
           QINDQRFEDAEEM  ES  K
Sbjct: 217 QINDQRFEDAEEMVHESETK 227

HSP 2 Score: 136.7 bits (343), Expect = 3.8e-31
Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +T RT +G G P  D + GE LMH+  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVD 106
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+    D D
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDED 105

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BLAST of ClCG01G005160 vs. Swiss-Prot
Match: ICLN_MOUSE (Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-13
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 1


Query: 94  LYIQVVWLSDVD-MAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDEESHNSDSE 153
           LYI    LS +D    G+++++ ++SLHAVS DP AY    LY+ ++    EES    S+
Sbjct: 37  LYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKLGEESKEPPSD 96

Query: 154 CHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHN 206
              +E +N D+  + E R VPS+ + LE +F   C+C  L+P+P  +D ++++
Sbjct: 97  --EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

HSP 2 Score: 45.1 bits (105), Expect = 1.5e-03
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1


Query: 49 GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQV 99
          GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AY    LY+ V
Sbjct: 35 GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMV 82

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BLAST of ClCG01G005160 vs. Swiss-Prot
Match: ICLN_RAT (Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-13
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 1


Query: 94  LYIQVVWLSDVD-MAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDEESHNSDSE 153
           LYI    LS +D    G+++++ ++SLHAVS DP AY    LY+ ++    EES    S+
Sbjct: 37  LYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNARFGEESKEPFSD 96

Query: 154 CHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHN 206
              +E +N D+  + E R VPS+ + LE +F   C+C  L+P+P  +D ++++
Sbjct: 97  --EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

HSP 2 Score: 45.1 bits (105), Expect = 1.5e-03
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1


Query: 49 GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQV 99
          GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AY    LY+ V
Sbjct: 35 GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMV 82

[Close]

BLAST of ClCG01G005160 vs. Swiss-Prot
Match: ICLN_RABIT (Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 1


Query: 94  LYIQVVWLSDVD-MAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDEESHNSDSE 153
           LYI    LS +D    G+++++ ++SLHAVS DP AY    LY+ ++    EES   +  
Sbjct: 37  LYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKFGEES--KELV 96

Query: 154 CHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHN 206
              EE  + D+  + E R VP + + LE +F   C+C  L+P+P  +D ++++
Sbjct: 97  ADEEEDSDDDVEPISEFRFVPGDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

HSP 2 Score: 62.8 bits (151), Expect = 6.9e-09
Identity = 42/157 (26.75%), Postives = 67/157 (42.68%), Query Frame = 1


Query: 49  GTLYISSRQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAK 108
           GTLYI+  ++ WL    +  G+++++ ++SLHAVS DP AY    LY+ V          
Sbjct: 35  GTLYIAESRLSWLDGSGL--GFSLEYPTISLHAVSRDPNAYPQEHLYVMV---------- 94

Query: 109 GYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKE 168
                F   S   V+                   DEE  + D           D+  + E
Sbjct: 95  --NAKFGEESKELVA-------------------DEEEDSDD-----------DVEPISE 147

Query: 169 MRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHN 206
            R VP + + LE +F   C+C  L+P+P  +D ++++
Sbjct: 155 FRFVPGDKSALEAMFTAMCECQALHPDPEDEDSDDYD 147

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BLAST of ClCG01G005160 vs. TrEMBL
Match: A0A0A0KPP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-99
Identity = 190/276 (68.84%), Postives = 213/276 (77.17%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLH 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+    D ++              
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELE------------- 120

Query: 121 AVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELE 180
             ++D E +              EES N D             AAV+EMRLVPSNPNELE
Sbjct: 121 --NSDSECHG-------------EESENFDL------------AAVREMRLVPSNPNELE 180

Query: 181 TLFEIFCQCAELNPEPTGD-DEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 240
           TLFEIFCQCAELNPEPTGD +EEEHNW+F ADQLE MPGLSV+GDDEEQF++ P +SIGH
Sbjct: 181 TLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGLSVAGDDEEQFSSIPPSSIGH 236

Query: 241 MNGDHDQLAHTVLQLQINDQRFEDAEEMEPESNGKH 276
            NGDHDQLA TVLQLQIND+RFEDA+EMEPE+NGKH
Sbjct: 241 SNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 236

[Close]

BLAST of ClCG01G005160 vs. TrEMBL
Match: B9I4K9_POPTR (Nucleotide-sensitive chloride conductance regulator family protein OS=Populus trichocarpa GN=POPTR_0012s14450g PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.3e-58
Identity = 128/218 (58.72%), Postives = 152/218 (69.72%), Query Frame = 1


Query: 64  VDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYI---QVVWLSDVDMAKGYAVDFLSMSLH 123
           +D   G     +   +  V  +    S   LYI   +VVWLSDVD  KGYAVDFLS+SLH
Sbjct: 21  IDTENGEEFMLMCREVSIVIGNGSPESPGTLYISTKKVVWLSDVDGTKGYAVDFLSISLH 80

Query: 124 AVSTDPEAYSSPCLYIQIDTGDDE-ESHNSDSECHGEESENLDLAAVKEMRLVPSNPNEL 183
           AVS DPEAY SPC+Y QI+TG+DE ES  SDSEC    S+ LDL+ V EMRLVPS+P++L
Sbjct: 81  AVSRDPEAYPSPCIYTQIETGEDEDESEGSDSEC----SDALDLSKVTEMRLVPSDPSQL 140

Query: 184 ETLFEIFCQCAELNPEPTGDDEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 243
           +TLF++FC+CAELNPEP  D+EEEHNW FSADQL      +   D E  F+  P +SIGH
Sbjct: 141 DTLFQVFCECAELNPEPVEDNEEEHNWIFSADQLS--DETAEVEDSEWNFSQNPTSSIGH 200

Query: 244 MNGDHDQLAHTVLQLQINDQRFEDAEEM--EPESNGKH 276
            NGDHD LA TVL+LQIND RFEDAEEM  E ES G+H
Sbjct: 201 SNGDHD-LARTVLELQINDHRFEDAEEMEHEHESKGRH 231

[Close]

BLAST of ClCG01G005160 vs. TrEMBL
Match: B9I4K9_POPTR (Nucleotide-sensitive chloride conductance regulator family protein OS=Populus trichocarpa GN=POPTR_0012s14450g PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.0e-28
Identity = 82/181 (45.30%), Postives = 101/181 (55.80%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MA GLR +TER G+G G P  D   GE  M +   V IV  N  PE PGTLYIS+++VVW
Sbjct: 1   MAPGLRQFTERRGDGAGQPVIDTENGEEFMLMCREVSIVIGNGSPESPGTLYISTKKVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKG---YAVDFLSM 120
           LSDVD  KGYAVDFLS+SLHAVS DPEAY SPC+Y Q+    D D ++G      D L +
Sbjct: 61  LSDVDGTKGYAVDFLSISLHAVSRDPEAYPSPCIYTQIETGEDEDESEGSDSECSDALDL 120

Query: 121 S----LHAVSTDPEAYSS------PCLYIQID-TGDDEESHN--------SDSECHGEES 160
           S    +  V +DP    +       C  +  +   D+EE HN        SD     E+S
Sbjct: 121 SKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEEHNWIFSADQLSDETAEVEDS 180

HSP 2 Score: 228.8 bits (582), Expect = 8.1e-57
Identity = 122/184 (66.30%), Postives = 145/184 (78.80%), Query Frame = 1


Query: 94  LYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDE-ESHNS 153
           LYI   +VVWLSDVD AKGYAVDFLS+SLHAVS DPEAY+SPC+Y QI+T DDE ES  S
Sbjct: 52  LYISTKKVVWLSDVDRAKGYAVDFLSISLHAVSRDPEAYTSPCIYTQIETEDDEHESDGS 111

Query: 154 DSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHNWYFS 213
           DSEC+G     LDL+ + EMRLVPS+PN+L++LFE+FC+CAELNPEP  ++EEEHNW FS
Sbjct: 112 DSECNGV----LDLSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPIEEEEEEHNWIFS 171

Query: 214 ADQLEAMPGLSVSGDDEEQFTATPLNSIGHMNGDHDQLAHTVLQLQINDQRFEDAEEMEP 273
           ADQLE       +G+D E +  +   SIG  NGDHD LA TVL+LQINDQRFEDAEEME 
Sbjct: 172 ADQLED----DATGEDSE-WHVSENPSIGQSNGDHD-LARTVLELQINDQRFEDAEEMEH 225

[Close]

BLAST of ClCG01G005160 vs. TrEMBL
Match: M5X213_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 82/181 (45.30%), Postives = 105/181 (58.01%), Query Frame = 1


Query: 1   MAMGLRPYTERTG-NGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVV 60
           M  GLR +T R   NG+  P  DA  GE LMH+ P V IV  NRPPE PGTLYIS+++VV
Sbjct: 1   MVAGLREFTARVERNGVDEPVLDAENGEELMHVQPCVSIVLGNRPPESPGTLYISTKKVV 60

Query: 61  WLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGY------AVD 120
           WLSDVD AKGYAVDFLS+SLHAVS DPEAY+SPC+Y Q+    D   + G        +D
Sbjct: 61  WLSDVDRAKGYAVDFLSISLHAVSRDPEAYTSPCIYTQIETEDDEHESDGSDSECNGVLD 120

Query: 121 FLSMS-LHAVSTDPEAYSS------PCLYIQID-TGDDEESHN-------SDSECHGEES 160
              ++ +  V +DP    S       C  +  +   ++EE HN        + +  GE+S
Sbjct: 121 LSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPIEEEEEEHNWIFSADQLEDDATGEDS 180

HSP 2 Score: 227.3 bits (578), Expect = 2.4e-56
Identity = 126/205 (61.46%), Postives = 149/205 (72.68%), Query Frame = 1


Query: 76  SMSLHAVSTDPEAYSSPCLYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSP 135
           S+S+   +  PE  S   LYI   QV+WLSDVD AKGYAVDFLS+SLHAVS DPEAY SP
Sbjct: 35  SVSIALGNRAPE--SPGTLYITTKQVIWLSDVDSAKGYAVDFLSLSLHAVSRDPEAYHSP 94

Query: 136 CLYIQIDTGDDEE-SHNSDSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAE 195
           C+Y QI+T  DE+ S +SDSEC+    E LDL+ V EMRL+PS+ ++L+TLF++FC+CAE
Sbjct: 95  CIYTQIETEADEDVSEDSDSECN----EVLDLSKVTEMRLIPSDASQLDTLFQMFCECAE 154

Query: 196 LNPEPTGDDEEEHNWYFSADQLEAMPGLSVSGDDEE-QFTATPLNSIGHMNGDHDQLAHT 255
           LNPEP   +EE HNW FSADQLE     +  GDD E  F   P NSIGH NGDHD LA T
Sbjct: 155 LNPEPIEGEEEGHNWVFSADQLE---DEAAEGDDSEWHFPQNPTNSIGHSNGDHD-LART 214

Query: 256 VLQLQINDQRFEDAEEMEPESNGKH 276
           VL+LQINDQRFEDAEE E  S+  H
Sbjct: 215 VLELQINDQRFEDAEEFEQVSDSSH 229

[Close]

BLAST of ClCG01G005160 vs. TrEMBL
Match: A0A061G066_THECC (Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=Theobroma cacao GN=TCM_047012 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-29
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +  R GNG G P  D +  E L+H+ P+V I   NR PE PGTLYI+++QV+W
Sbjct: 1   MVIGLRQFMARVGNGAGEPVLDTDNVEELVHVQPSVSIALGNRAPESPGTLYITTKQVIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAK 109
           LSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y Q+   +D D+++
Sbjct: 61  LSDVDSAKGYAVDFLSLSLHAVSRDPEAYHSPCIYTQIETEADEDVSE 108

HSP 2 Score: 220.7 bits (561), Expect = 2.2e-54
Identity = 128/228 (56.14%), Postives = 155/228 (67.98%), Query Frame = 1


Query: 76  SMSLHAVSTDPEAYSSPCLYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSP 135
           S+S+   +  PE  S   LYI   QVVWLSD +  KGYAVDFLS+SLHAVS DPEA+SSP
Sbjct: 36  SVSIVLGNRPPE--SPGTLYISTKQVVWLSDTERTKGYAVDFLSVSLHAVSRDPEAFSSP 95

Query: 136 CLYIQIDTGD-DEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAE 195
           C+Y QIDTGD D+ES +SDSE +G     LDL+ + EMRLVPS+PN+L+TLFE+FC+CAE
Sbjct: 96  CIYTQIDTGDEDDESESSDSESNG----TLDLSKITEMRLVPSDPNQLDTLFEVFCECAE 155

Query: 196 LNPEPT----------------------GDDEEEHNWYFSADQL-EAMPGLSVSGDDEEQ 255
           LNPEP                        +DE+EHNW FSADQL  AM G+ +  D    
Sbjct: 156 LNPEPVVEGGVLLFRTFCQLLTHILALFSEDEQEHNWIFSADQLGPAMDGVDLEWDS--- 215

Query: 256 FTATPLNSIGHMNGDHDQLAHTVLQLQINDQRFEDAEEMEPE-SNGKH 276
            + T  ++IGH NGDHD LA  VL+LQINDQRFEDAEEME + SNG+H
Sbjct: 216 -SPTGFSTIGHPNGDHD-LARNVLELQINDQRFEDAEEMERDNSNGRH 252

[Close]

BLAST of ClCG01G005160 vs. TAIR10
Match: AT5G62290.1 (AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein)

HSP 1 Score: 208.4 bits (529), Expect = 5.7e-54
Identity = 114/200 (57.00%), Postives = 139/200 (69.50%), Query Frame = 1


Query: 81  AVSTDPEAYSSP-CLYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYI 140
           AV+       SP  LYI   +++WLSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y 
Sbjct: 37  AVALGNRPIESPGTLYITSRKLIWLSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYT 96

Query: 141 QIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEP 200
           QI+  +DE     D E   E +E LDL+ ++EMRLVPS+  +LETLF++FC+CAELNPEP
Sbjct: 97  QIEVEEDE-----DDESDSESTEVLDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEP 156

Query: 201 TGDDEEE--HNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGHMNGDHDQLAHTVLQL 260
             ++EEE  HNW FSADQ++   G     D E Q + +P + IGH NGD + L   +L+L
Sbjct: 157 VQEEEEESGHNWVFSADQMDVRGG---DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLEL 216

Query: 261 QINDQRFEDAEEMEPESNGK 275
           QINDQRFEDAEEM  ES  K
Sbjct: 217 QINDQRFEDAEEMVHESETK 227

HSP 2 Score: 136.7 bits (343), Expect = 2.1e-32
Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +T RT +G G P  D + GE LMH+  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVD 106
           LSDVDMAKGYAVDFLS+SLHAVS DPEAYSSPC+Y Q+    D D
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDED 105

[Close]

BLAST of ClCG01G005160 vs. NCBI nr
Match: gi|449451805|ref|XP_004143651.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.9e-99
Identity = 190/276 (68.84%), Postives = 213/276 (77.17%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLH 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+    D ++              
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELE------------- 120

Query: 121 AVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELE 180
             ++D E +              EES N D             AAV+EMRLVPSNPNELE
Sbjct: 121 --NSDSECHG-------------EESENFDL------------AAVREMRLVPSNPNELE 180

Query: 181 TLFEIFCQCAELNPEPTGD-DEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 240
           TLFEIFCQCAELNPEPTGD +EEEHNW+F ADQLE MPGLSV+GDDEEQF++ P +SIGH
Sbjct: 181 TLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGLSVAGDDEEQFSSIPPSSIGH 236

Query: 241 MNGDHDQLAHTVLQLQINDQRFEDAEEMEPESNGKH 276
            NGDHDQLA TVLQLQIND+RFEDA+EMEPE+NGKH
Sbjct: 241 SNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 236

[Close]

BLAST of ClCG01G005160 vs. NCBI nr
Match: gi|659073126|ref|XP_008467268.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 5.2e-97
Identity = 189/278 (67.99%), Postives = 211/278 (75.90%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR YTERTGNGLGLP+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLH 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAY SPCLY+Q+    D ++              
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELE------------- 120

Query: 121 AVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELE 180
             ++D E +              EES N D              AV+EMRLVPSNPNELE
Sbjct: 121 --NSDSECHG-------------EESENFDL------------TAVREMRLVPSNPNELE 180

Query: 181 TLFEIFCQCAELNPEPTGD-DEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 240
           TLFEIFCQCAELNPEP GD +EEEHNW+F ADQLE MPGLSV+GDDEEQF++ P +SIG+
Sbjct: 181 TLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPGLSVAGDDEEQFSSIPPSSIGN 238

Query: 241 MNGDHDQLAHTVLQLQINDQRFEDAEEMEPE-SNGKHS 277
            NGDHDQLA TVLQLQINDQRFEDAEEMEPE +NGKHS
Sbjct: 241 SNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKHS 238

[Close]

BLAST of ClCG01G005160 vs. NCBI nr
Match: gi|778700509|ref|XP_011654882.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 3.3e-96
Identity = 187/276 (67.75%), Postives = 210/276 (76.09%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLRPYT+RTGNGLG P+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLH 120
           LSDV MAKGYAVDFLSMSLHAVSTDPEAY+SPCLY+Q+    D ++              
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELE------------- 120

Query: 121 AVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELE 180
             ++D E +              EES N D             AAV+EMRLVPSNPNELE
Sbjct: 121 --NSDSECHG-------------EESENFDL------------AAVREMRLVPSNPNELE 180

Query: 181 TLFEIFCQCAELNPEPTGD-DEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 240
           TLFEIFCQCAELNPEPTGD +EEEHNW+F ADQLE MP   V+GDDEEQF++ P +SIGH
Sbjct: 181 TLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP---VAGDDEEQFSSIPPSSIGH 233

Query: 241 MNGDHDQLAHTVLQLQINDQRFEDAEEMEPESNGKH 276
            NGDHDQLA TVLQLQIND+RFEDA+EMEPE+NGKH
Sbjct: 241 SNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 233

[Close]

BLAST of ClCG01G005160 vs. NCBI nr
Match: gi|659073128|ref|XP_008467269.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 9.1e-94
Identity = 186/278 (66.91%), Postives = 208/278 (74.82%), Query Frame = 1


Query: 1   MAMGLRPYTERTGNGLGLPAFDANQGEVLMHIMPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M MGLR YTERTGNGLGLP+FD +QGEVLMH++PAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQVVWLSDVDMAKGYAVDFLSMSLH 120
           LSD +MAKGYAVDFLSMSLHAVSTDPEAY SPCLY+Q+    D ++              
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELE------------- 120

Query: 121 AVSTDPEAYSSPCLYIQIDTGDDEESHNSDSECHGEESENLDLAAVKEMRLVPSNPNELE 180
             ++D E +              EES N D              AV+EMRLVPSNPNELE
Sbjct: 121 --NSDSECHG-------------EESENFDL------------TAVREMRLVPSNPNELE 180

Query: 181 TLFEIFCQCAELNPEPTGD-DEEEHNWYFSADQLEAMPGLSVSGDDEEQFTATPLNSIGH 240
           TLFEIFCQCAELNPEP GD +EEEHNW+F ADQLE MP   V+GDDEEQF++ P +SIG+
Sbjct: 181 TLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMP---VAGDDEEQFSSIPPSSIGN 235

Query: 241 MNGDHDQLAHTVLQLQINDQRFEDAEEMEPE-SNGKHS 277
            NGDHDQLA TVLQLQINDQRFEDAEEMEPE +NGKHS
Sbjct: 241 SNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKHS 235

[Close]

BLAST of ClCG01G005160 vs. NCBI nr
Match: gi|694398714|ref|XP_009374514.1| (PREDICTED: chloride conductance regulatory protein ICln-like [Pyrus x bretschneideri])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 126/187 (67.38%), Postives = 144/187 (77.01%), Query Frame = 1


Query: 94  LYI---QVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYSSPCLYIQIDTGDDE-ESHNS 153
           LYI   QV+WLSD D AKGYAVDFLS+SLHAVS DPEAY+SPCLY QI+T DDE ES  S
Sbjct: 52  LYISTKQVIWLSDTDKAKGYAVDFLSISLHAVSRDPEAYTSPCLYTQIETEDDEDESDGS 111

Query: 154 DSECHGEESENLDLAAVKEMRLVPSNPNELETLFEIFCQCAELNPEPTGDDEEEHNWYFS 213
           DSEC+G+    LDL+ V EMRLVPS+PN+L++LFE+FC+CAELNPEP  + EEEHNW FS
Sbjct: 112 DSECNGD----LDLSKVTEMRLVPSDPNQLDSLFEVFCECAELNPEPIQEGEEEHNWIFS 171

Query: 214 ADQLEAMPGLSVSGDDEEQFTATPLNSIGHMNGDHDQLAHTVLQLQINDQRFEDAEEMEP 273
           ADQLE     +V  D E      P NSIG  NGDHD LA TVL+LQINDQRFEDAEEME 
Sbjct: 172 ADQLE---DEAVGDDSEWPVLQNPSNSIGQSNGDHD-LARTVLELQINDQRFEDAEEMEH 230

Query: 274 ES-NGKH 276
           E+ N +H
Sbjct: 232 ETDNSRH 230

The following BLAST results are available for this feature:

BLAST of ClCG01G005160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ICLN_ARATH	1.0e-52	57.00	Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g6229...	[more]
ICLN_MOUSE	2.7e-13	35.40	Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1	[more]
ICLN_RAT	4.6e-13	35.40	Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1	[more]
ICLN_RABIT	1.1e-11	33.63	Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2	[more]

BLAST of ClCG01G005160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPP2_CUCSA	1.3e-99	68.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1	[more]
B9I4K9_POPTR	7.3e-58	58.72	Nucleotide-sensitive chloride conductance regulator family protein OS=Populus tr...	[more]
B9I4K9_POPTR	6.0e-28	45.30	Nucleotide-sensitive chloride conductance regulator family protein OS=Populus tr...	[more]
M5X213_PRUPE	1.9e-29	45.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1	[more]
A0A061G066_THECC	3.2e-29	58.33	Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=The...	[more]

BLAST of ClCG01G005160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62290.1	5.7e-54	57.00	nucleotide-sensitive chloride conductance regulator (ICln) family pr...	[more]

BLAST of ClCG01G005160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451805\|ref\|XP_004143651.1\|	1.9e-99	68.84	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sati...	[more]
gi\|659073126\|ref\|XP_008467268.1\|	5.2e-97	67.99	PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo...	[more]
gi\|778700509\|ref\|XP_011654882.1\|	3.3e-96	67.75	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sati...	[more]
gi\|659073128\|ref\|XP_008467269.1\|	9.1e-94	66.91	PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo...	[more]
gi\|694398714\|ref\|XP_009374514.1\|	1.6e-58	67.38	PREDICTED: chloride conductance regulatory protein ICln-like [Pyrus x bretschnei...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006884	cell volume homeostasis
biological_process	GO:0006821	chloride transport
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0034709	methylosome
cellular_component	GO:0034715	pICln-Sm protein complex
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G005160.1	ClCG01G005160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21399	CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN	coord: 1..273 score: 8.9
None	No IPR available	PFAM	PF03517	Voldacs	coord: 98..212 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G005160	Csa5G171150	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G005160	MELO3C005412	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G005160	Cla003570	Watermelon (97103) v1	wcgwmB154
ClCG01G005160	Cla97C01G005390	Watermelon (97103) v2	wcgwmbB089
ClCG01G005160	Bhi12G000514	Wax gourd	wcgwgoB193
ClCG01G005160	CSPI05G08040	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G005160	Cucsa.115660	Cucumber (Gy14) v1	cgywcgB170
ClCG01G005160	CmaCh02G010130	Cucurbita maxima (Rimu)	cmawcgB519
ClCG01G005160	CmoCh02G010280	Cucurbita moschata (Rifu)	cmowcgB517
ClCG01G005160	Lsi09G005460	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G005160	Cp4.1LG05g07110	Cucurbita pepo (Zucchini)	cpewcgB640
ClCG01G005160	CsGy5G005430	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G005160	MELO3C005412.2	Melon (DHL92) v3.6.1	medwcgB017
ClCG01G005160	Carg08464	Silver-seed gourd	carwcgB0688

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G005160	Cucumber (Gy14) v1	cgywcgB447
ClCG01G005160	Cucurbita maxima (Rimu)	cmawcgB256
ClCG01G005160	Cucurbita moschata (Rifu)	cmowcgB244
ClCG01G005160	Cucurbita pepo (Zucchini)	cpewcgB168
ClCG01G005160	Bottle gourd (USVL1VR-Ls)	lsiwcgB328
ClCG01G005160	Silver-seed gourd	carwcgB1008
ClCG01G005160	Cucumber (Chinese Long) v3	cucwcgB385