Lsi09G004040 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTAGTATCAAATGCATCTTCTTGTAGGTACTTTTGTTTGTTTGTTTATTATTAAATAGTTACAAGGTGAGGATTAAATCTATATTGACTTTTGGGATAGCAATTGATACATCATTTCATTAAGTTCTTTGAATTGACCTCTTTTTATAGGTCGTAAGTTTGACAAATCTCTACCTCTATTCGTAATTTATTTATAAATATGTATGTATAGTTGTAAGATTAGTAGACCCGATTGTCTCTAATTTATTATTATTATTATTTAACAACGTGTGGGGTGGAGAATCAAACTTCTAATCCCAAGATCGATAATACAAAGTTTATGCAAGTAAGTTGTTCATTTTAGTAGAAATAATCTATTATTAATTTGTTCGTTATTACTAAATCTTACCCATATAATATTACTGGTGTAAAGTCTATTATTTTGAGTTGTTAGTTAGTTTATCAAGTCTATTAATATGAATCGTTTATGGTATCATCAATATGCCGATGGTACCACTTCTCATCTTTGACAATTTTTTATGCAATACAAACATATCTTTCTTTCTATATCTAAATTTGTTTGCTTCTTCAATAGATTTTCTTTTTAAATAAATATTTGAATTCATAGTGGAATAAATAGCGTTACATAAGTGGGAAAAATAATTGAAGGAAGAGCCGCCTTTCATATATATGCATTTAAACCGATTAACAAATTTACAAGAGAAGAATGGGAGGAAAATACAATTGGTGTGGTCACCATTTTCCAATAATTTTATTTTTAGAAGAAAAAAAGAGAGTGTGGAATAAATGGATTAATTAATTGGCATTCTGCTGCCCTCGTGATTCTTATTAAATGTTCATCTCTCTCTCTCACAAATTCAACCCCCCCCCCAAAAAAAAAAAGTAATTAAATAAATAATTGTAATAAGTTTTTACATAGAAAGGGAGAGTTGTATTTTTTAAAATTGTGAAATTTGATGCTTTAAATACTTATGATATATTGATGAATTCAACTTCGTCAATCTCTGCTTCCACTGAGTACTTTTTTTCTGCATCATCTTTCCTTTCACATTCTCTGTTCCTTCTACAACGACCGAACATACACAAATTACAAAAAATAAAAAAAAAAAAAAATGGTCTTTTTTTCTTCTTCTTTTTTTCCCTCTTTTTTTTATACCTTTTAATTGAAGTTGTTAATGTGTTTTTGTGTGTTAATTTTACAGGTGAGTATGGTGAGAGAAGGAGAGAATAATTCAGTTCCAGAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCACTTCATAAGTCTACTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCTGCTATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATACTCTTCTCCAGGTATAGATCCTAACTTATCCGCTTAATTTTTTTTTTTTTTCTTTTAGTTCACTACGTAGATATAGCAATAAGACCCAAAGTATTAGTAAATATAACACAATGAGAAAGAATTTACAAATATAACAAAATTTAAATCAAACTTTCGAAATCTATATCAATAATATTTCATATCGCTGATAGGAGTCTATCACTAATAGATTTTGCTATATTTGTAAAAAATTTTAAAATTTGTGCTATACACTTAATTATTATTTCTAAAAGTACAAACCACTGTAATTATTCTAATAATTAAATTAGAATGCTTAAACTTAGCCTAAGTTTTTAGTTTGAGTGATGGTTTAAGTTTAATATTATAATGTGGTATACATCAATAAGGTAAGAAAGAACATTTACAATGTCAATTTGTATTTGGTAATTGTCTCTCCTTCCTTAATTAAACTTTAAATTTTGATTGAAACATATTATATTATTGTATTAATATAACCTATCAACTAAAGCTTTTGAGACGATGATTAACAGATAAGAAGATATGTGTATCATGAAGTTATACGACTAGGAGATGCTGAGAAGCTGTTGAATTGTTCTCTTATACAAGTAATATAATTATGGCTATAATATTATTATATTATATGGTTTTTAATTTAATTTTTGGGATGAAAATTCCCATAAAGTTATAATAATGTGTGTAATTTATGAATTTATGTTTAAGGGGAAATTGTGTATGTGATATTTGAAAACAGCCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGAAGGGGAAAGAGAAAAGGTTTGAGAGGAGGAGGAGGATCCGCTCATTTCTGCATCACATGCTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGGTATTTTTTCTTATTCCCTTTAACTTTATTCTTTTTTTTTTTCTTTTTAATTTTCCAAAACTTCTACTAACTATAGATTTAATATAATTTTGGTTTTTTTTGTTTGTTTAATATTGGTATTTTAAACTTTTAATTTTGTGTATAGTCGTTTCATGATTTTTTTTAAAAAAAAATTGAAAGGGTAGAGATAAAATTTATAATTTAATCTATAATTTGTATAGGAATTTGCAAAATTTTACCATTTTTATAGTACGAAAAATTTAGATATGAAATTTGAATTTTGACCTCAAACGAAGAAATACATGTTACTTAGTTGCATGCATTTATGATCTTTACCAAATCATACATTTTGATATATATATAAAGTAAAATTAAAGAAAATATTCAATATGATTATTTTCACCTGTGATAGAGCTAAATGTAATCTCACTTTTTTTCTCCCTTCTTAATTTTCTTTTTCAAATTCAAAAATTTATTTTTAGGTTAAATTAAAAGTTTGGTACTTATTAAATTTTTATATTTTTGTCTATGATCATTAAAAAAATCTACAAATACTTTTTAGAGTTGAATGATGATAAACAAAAATATAAAAATTTAGTAAGTACTAAACTCTTAATTTAACCTATTTTTAGGTATAAAATCAACCGGAAAATTCACAACCATTTGTGCAGTCTGTGTGATGTGATGTATCAAGATGATTTTTTTAAAAATAATTATATGTTTTTTTGTAAACAATTAAATTTTTCTAAATATTTTTTAAAACTACAATATTAAAAAAAAAAATCCTCCTTAAACTCTAAACATAATTCTTAAAATCCTAAATTTTAAGTTTTGTGTCTAATATATATATATATATAATTTTTAATTTTATTTATTACATACCTTTGATTCATTCTACCTTTATTTTAAAATTTTATGGGACTAATTAACACGAAATTATACTTATTAGACATAAAATTTAATTTTATATCAAAAAGATTTGTTGTGATTATTAGGTAGTTCAACACAGAAAATTCTGACACTTCTATTAGATGTTGGCTGGAGTGCACTTAAGTTTTTTTCTTTCCCAAATATTAATACCATAAATACAAGGGTGGAGTTTCCACTTCCTTACCAATAATTTAAGGGTTAATGTTTAAATTGTTGTATTTTGTTGTTTTTTTTAGATCAATCAAAAGGTGAATGACAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATTTTCCACCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACGGGGATTTTCCCTCCGCTGTCTCAAAAACCGCCGCCGCCATTAAGTTAGTCAAGAAGAATCGTAACTGTGTGAAATCGTTAGCGGCGGTTCTGTACCGGCCGAGATGCTTTCCCATCTCCGATATTGCCACCGCCGCGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACCTGATTTTTGGCTACTCTACCATATATTAATTATTATATGTTTGTTTCATTATGATATAACATAAATGTATCGGCATGTAATTAAATTTCGTATAATATGTTGTAATTATGTCCCAAAAAGCCCTTTTGGCTGATTCAATGTGTTTCAATTTTATAATCCAC ATGATTTACAAGGTGAGTATGGTGAGAGAAGGAGAGAATAATTCAGTTCCAGAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCACTTCATAAGTCTACTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCTGCTATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATACTCTTCTCCAGATAAGAAGATATGTGTATCATGAAGTTATACGACTAGGAGATGCTGAGAAGCTGTTGAATTGTTCTCTTATACAACCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGAAGGGGAAAGAGAAAAGGTTTGAGAGGAGGAGGAGGATCCGCTCATTTCTGCATCACATGCTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGATCAATCAAAAGGTGAATGACAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATTTTCCACCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACGGGGATTTTCCCTCCGCTGTCTCAAAAACCGCCGCCGCCATTAAGTTAGTCAAGAAGAATCGTAACTGTGTGAAATCGTTAGCGGCGGTTCTGTACCGGCCGAGATGCTTTCCCATCTCCGATATTGCCACCGCCGCGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACCTGATTTTTGGCTACTCTACCATATATTAATTATTATATGTTTGTTTCATTATGATATAACATAAATGTATCGGCATGTAATTAAATTTCGTATAATATGTTGTAATTATGTCCCAAAAAGCCCTTTTGGCTGATTCAATGTGTTTCAATTTTATAATCCAC ATGATTTACAAGGTGAGTATGGTGAGAGAAGGAGAGAATAATTCAGTTCCAGAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCACTTCATAAGTCTACTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCTGCTATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATACTCTTCTCCAGATAAGAAGATATGTGTATCATGAAGTTATACGACTAGGAGATGCTGAGAAGCTGTTGAATTGTTCTCTTATACAACCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGAAGGGGAAAGAGAAAAGGTTTGAGAGGAGGAGGAGGATCCGCTCATTTCTGCATCACATGCTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGATCAATCAAAAGGTGAATGACAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATTTTCCACCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACGGGGATTTTCCCTCCGCTGTCTCAAAAACCGCCGCCGCCATTAAGTTAGTCAAGAAGAATCGTAACTGTGTGAAATCGTTAGCGGCGGTTCTGTACCGGCCGAGATGCTTTCCCATCTCCGATATTGCCACCGCCGCGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACCTGA MIYKVSMVREGENNSVPEWLEILLGEKFFTPCSLHKSTKKNDKTFFCLFCRSAICFSCFSSHRTHTLLQIRRYVYHEVIRLGDAEKLLNCSLIQPYTTNRAKVVFLKHRRRGKRKGLRGGGGSAHFCITCFRNLQYPYLFCSLSCKINQKVNDKIEIINKQKRNYDHFPPRSTTQTQTPTSVLDGDFPSAVSKTAAAIKLVKKNRNCVKSLAAVLYRPRCFPISDIATAANRRKGVPQRSPLT
BLAST of Lsi09G004040 vs. TrEMBL
Match: A0A0A0KKT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160750 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 9.8e-107 Identity = 200/252 (79.37%), Postives = 214/252 (84.92%), Query Frame = 1
BLAST of Lsi09G004040 vs. TrEMBL
Match: F6HP95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00150 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.2e-45 Identity = 113/242 (46.69%), Postives = 137/242 (56.61%), Query Frame = 1
BLAST of Lsi09G004040 vs. TrEMBL
Match: V4T0E5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021750mg PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.8e-45 Identity = 107/238 (44.96%), Postives = 145/238 (60.92%), Query Frame = 1
BLAST of Lsi09G004040 vs. TrEMBL
Match: K7LMR9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G030900 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.4e-44 Identity = 110/249 (44.18%), Postives = 145/249 (58.23%), Query Frame = 1
BLAST of Lsi09G004040 vs. TrEMBL
Match: A0A061G3H1_THECC (PLATZ transcription factor family protein, putative OS=Theobroma cacao GN=TCM_016018 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.1e-44 Identity = 117/273 (42.86%), Postives = 147/273 (53.85%), Query Frame = 1
BLAST of Lsi09G004040 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 158.7 bits (400), Expect = 4.6e-39 Identity = 96/255 (37.65%), Postives = 138/255 (54.12%), Query Frame = 1
BLAST of Lsi09G004040 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein) HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39 Identity = 94/256 (36.72%), Postives = 139/256 (54.30%), Query Frame = 1
BLAST of Lsi09G004040 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein) HSP 1 Score: 155.6 bits (392), Expect = 3.9e-38 Identity = 92/255 (36.08%), Postives = 139/255 (54.51%), Query Frame = 1
BLAST of Lsi09G004040 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28 Identity = 80/234 (34.19%), Postives = 120/234 (51.28%), Query Frame = 1
BLAST of Lsi09G004040 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein) HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25 Identity = 81/262 (30.92%), Postives = 121/262 (46.18%), Query Frame = 1
BLAST of Lsi09G004040 vs. NCBI nr
Match: gi|659074643|ref|XP_008437715.1| (PREDICTED: uncharacterized protein LOC103483060 [Cucumis melo]) HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106 Identity = 198/245 (80.82%), Postives = 213/245 (86.94%), Query Frame = 1
BLAST of Lsi09G004040 vs. NCBI nr
Match: gi|778699974|ref|XP_011654791.1| (PREDICTED: uncharacterized protein LOC101221644 [Cucumis sativus]) HSP 1 Score: 394.4 bits (1012), Expect = 1.4e-106 Identity = 200/252 (79.37%), Postives = 214/252 (84.92%), Query Frame = 1
BLAST of Lsi09G004040 vs. NCBI nr
Match: gi|731380155|ref|XP_010662296.1| (PREDICTED: uncharacterized protein LOC100852507 [Vitis vinifera]) HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46 Identity = 118/252 (46.83%), Postives = 142/252 (56.35%), Query Frame = 1
BLAST of Lsi09G004040 vs. NCBI nr
Match: gi|1009165548|ref|XP_015901098.1| (PREDICTED: uncharacterized protein LOC107434182 [Ziziphus jujuba]) HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46 Identity = 112/258 (43.41%), Postives = 146/258 (56.59%), Query Frame = 1
BLAST of Lsi09G004040 vs. NCBI nr
Match: gi|702336317|ref|XP_010055523.1| (PREDICTED: uncharacterized protein LOC104443711 [Eucalyptus grandis]) HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46 Identity = 112/248 (45.16%), Postives = 141/248 (56.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |