ClCG01G003870 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003870
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	PLATZ transcription factor family protein LENGTH=245
Location	CG_Chr01 : 4124910 .. 4126690 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGAGAAGGTGAGAATAATTCAGTTCCCCAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCAATTCACAAGTCTTGTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCCGCCATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATGCTCTTCTTCAGGTATTGCCGTAACTTATCAGTTTAAGTTTTTTTTCGTACGAGACTAATATTTAGAATGTATGCATCTTGTTCTAATCACTCGCAAACACAAAAATTTTAAAAATAAGTAAAGAGAGTTTCTCACGTGACAAACTAAACTGAACAATTGAAAAGGATGCACAAATATGAATGTAGCCTAGAGTTTAATTATTTACGTATAAATGATACCCTAACGAGAAGTTTTATATTAATTTTGTCTCTCTGTATATGTCATTTTGAGTCTAATTGACATCCGTGTAATTACTTGTGAGATGTTCTTTCTTTTTTTTTTCCCTAATTTTCAAGTCAACATGATCTCAATTAGTTAACTAAGCTATGTGTCATTGTCAAAAAGTCATAAATTTGAATTCTCCACCTTTCATTTATATTGTAAAACTCAAAATTAATACTTAGGGGCAATTGTAGTATGACAGTCAAACTCAAAATATTAGCGGATATAGCACAATGAGAAAGATGGTAGGAGTTTATCAATAATAGAGACTACATTGCTTGTATGAGTTTATACCAATAAATTTTGCTATATTTGCAAAATTCTTTAATGATTGTGTTTTACACTTAATTATTATCCTAAAAGTACTACCATTGCAATTATATCCTAATAATAATAAAATTAGAATGCTTAAATTTAGGCTAAGTTTTGAATTTTTTTTTCCTTTCATTCTGGTGGTTGACAGATAAGAAGATATGTGTACCATGAGGTTATAAGGCTAGGAGATGCTGAGAAGCTGCTGAATTGTTCTCTTGTACAAGTAATTAATAATTATGGTTTGGCATGAAAATTAATAATTAGCGTTACATAAAATGTATTTACATCATATTTAATTGAACACAGCCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGGGGAAAGAGAAGAGGAGGATCGGGTAATCCGTGCATCACTTGTTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGGTATCTTTCTTTCTTATTCCCTTTTAACATTACTCTCCACTTTTCCAAACTACAACTAATTAAATAATTATTACTATACTTATACTTATAATTTTTTTAGTCAACCAATAATTTAATATAATATGAAAGCAGATACTCCAAGCATTCACGCATTCAAAGATTTAAGTTGTAATTTCATTATAGTTATTCCCAAAATATTAATATCATAGATACAAGGGTGAAGTTTCCACTTTCTTACCAATAATTTAGGGTTAATGTTTAATTATTGTTTTTTTTTTTTTTTTTTTTAATCAATCAAAAGTTGAATGGCAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATCTTCCGCCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACCTCGATTACCCGTCCGCCGTCTCCAAAACCGCCGCCGCCGTCAATTTAGTCAAAAAGAACCGTAGCGGTGTGAAGTCGTTAGCGGCGGTTCTATGCCGGCCGAGATGCTTTCCCATCTCCGATATCGCCACCGCCGTGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACTTGA

mRNA sequence

ATGGTGAGAGAAGGTGAGAATAATTCAGTTCCCCAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCAATTCACAAGTCTTGTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCCGCCATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATGCTCTTCTTCAGATAAGAAGATATGTGTACCATGAGGTTATAAGGCTAGGAGATGCTGAGAAGCTGCTGAATTGTTCTCTTGTACAACCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGGGGAAAGAGAAGAGGAGGATCGGGTAATCCGTGCATCACTTGTTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGTTGAATGGCAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATCTTCCGCCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACCTCGATTACCCGTCCGCCGTCTCCAAAACCGCCGCCGCCGTCAATTTAGTCAAAAAGAACCGTAGCGGTGTGAAGTCGTTAGCGGCGGTTCTATGCCGGCCGAGATGCTTTCCCATCTCCGATATCGCCACCGCCGTGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACTTGA

Coding sequence (CDS)

ATGGTGAGAGAAGGTGAGAATAATTCAGTTCCCCAATGGCTTGAAATTCTTTTGGGAGAGAAGTTCTTTACTCCATGTTCAATTCACAAGTCTTGTAAGAAGAATGACAAGACTTTCTTTTGCTTGTTCTGCCGCTCCGCCATTTGCTTCTCTTGCTTCTCTTCTCATCGCACTCATGCTCTTCTTCAGATAAGAAGATATGTGTACCATGAGGTTATAAGGCTAGGAGATGCTGAGAAGCTGCTGAATTGTTCTCTTGTACAACCATACACAACAAACAGAGCAAAAGTGGTGTTTCTAAAACATAGAAGGGGAAAGAGAAGAGGAGGATCGGGTAATCCGTGCATCACTTGTTTTCGCAACCTTCAATATCCATATCTCTTTTGCTCTCTTTCATGCAAGTTGAATGGCAAAATTGAAATAATCAACAAACAAAAAAGGAATTATGATCATCTTCCGCCGCGAAGCACAACACAAACCCAAACCCCAACCTCCGTTCTGGACCTCGATTACCCGTCCGCCGTCTCCAAAACCGCCGCCGCCGTCAATTTAGTCAAAAAGAACCGTAGCGGTGTGAAGTCGTTAGCGGCGGTTCTATGCCGGCCGAGATGCTTTCCCATCTCCGATATCGCCACCGCCGTGAACCGCCGAAAGGGCGTTCCTCAAAGATCGCCGTTAACTTGA

Protein sequence

MVREGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRRGGSGNPCITCFRNLQYPYLFCSLSCKLNGKIEIINKQKRNYDHLPPRSTTQTQTPTSVLDLDYPSAVSKTAAAVNLVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVPQRSPLT

Homology

[Close]

BLAST of ClCG01G003870 vs. TrEMBL
Match: A0A0A0KKT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160750 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-100
Identity = 194/252 (76.98%), Postives = 206/252 (81.75%), Query Frame = 1


Query: 1   MVREGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60
           MVRE ENNSVP+W+EILLGEKFFTPCS+H SCKKNDKTFFCLFCRSAICFSCFSSHRTHA
Sbjct: 1   MVREVENNSVPEWVEILLGEKFFTPCSLHISCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60

Query: 61  LLQIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLK-HRRGKRRG---------- 120
           LLQIRRYVYHEV+ LGDAEKL+NCSLVQPYTTNRAKVVFLK  RRGKRRG          
Sbjct: 61  LLQIRRYVYHEVVLLGDAEKLMNCSLVQPYTTNRAKVVFLKERRRGKRRGLRSSSSSSSS 120

Query: 121 ---------GSGNPCITCFRNLQYPYLFCSLSCKL----NGKIEIINKQKRNYDHLPPRS 180
                     +GN CITCFRNLQYPYLFCSLSCK+    N KIEIINKQKR Y++LPPR+
Sbjct: 121 GGGGWRSNNNNGNLCITCFRNLQYPYLFCSLSCKINQKVNEKIEIINKQKRKYENLPPRT 180

Query: 181 TTQTQTPTSVLDLDYPSAVSKTAAAVNLVKK-NRSGVKSLAAVLCRPRCFPISDIATAVN 228
           TT+ QTPTSVLD D+ S     AAAV L KK NRS VKSLAAVLCRPRCFPIS  ATAVN
Sbjct: 181 TTENQTPTSVLDRDFSS-----AAAVKLAKKNNRSCVKSLAAVLCRPRCFPISGFATAVN 240

[Close]

BLAST of ClCG01G003870 vs. TrEMBL
Match: F6HP95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00150 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.1e-49
Identity = 122/238 (51.26%), Postives = 142/238 (59.66%), Query Frame = 1


Query: 10  VPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVY 69
           +P WLEILLGEKFF  C +H+  KKN+K  FCL C ++IC  C   HR H LLQIRRYVY
Sbjct: 8   IPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPHRHHRLLQIRRYVY 67

Query: 70  HEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPYLF 129
           H+VIRL DA+KL++CSLVQ YTTN AKVVFL  R   R   GSGN C TC R+LQ PYLF
Sbjct: 68  HDVIRLDDAQKLMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTCDRSLQDPYLF 127

Query: 130 CSLSCKLNGKIEIINKQKRNYDHLP-----PRSTTQTQTPTSVLD----LDYPSAVSKTA 189
           CSL+CK+   ++ I    R + HL           +  TP SVLD    L   S  S T 
Sbjct: 128 CSLACKVRFALKFIINLLR-FLHLARGEAFSELDDRQMTPESVLDSPVSLRTSSGSSSTG 187

Query: 190 AAVN-----------LVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVPQRSPL 227
            AV+            VKK RS V S+     RP   P SD A  +NRRKGVP RSPL
Sbjct: 188 GAVSCRALACTATTEFVKKKRSSV-SVPRFPFRPILSPTSDNAGGINRRKGVPHRSPL 243

[Close]

BLAST of ClCG01G003870 vs. TrEMBL
Match: A0A061G3H1_THECC (PLATZ transcription factor family protein, putative OS=Theobroma cacao GN=TCM_016018 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 123/270 (45.56%), Postives = 149/270 (55.19%), Query Frame = 1


Query: 8   NSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRY 67
           +S+P WL ILLGEKFF PC +H+S KKN+K  FCL C   IC  C   HR H  LQIRRY
Sbjct: 5   SSIPHWLGILLGEKFFDPCVVHESAKKNEKNIFCLNCCVTICPHCLPVHRPHRRLQIRRY 64

Query: 68  VYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPY 127
           VY +VIRL DA+KL+NCSLVQPYTTN AKVVFL  R   R   GSGN CI C R+LQ P+
Sbjct: 65  VYQDVIRLSDAQKLINCSLVQPYTTNSAKVVFLNERPMSRPFRGSGNFCINCDRSLQDPF 124

Query: 128 LFCSLSCKLN--------GKIEIINKQKRNYDHLPPRSTTQT------------QTPTSV 187
           LFCSLSCK+N        GK     K  +N + LP    T++             TP SV
Sbjct: 125 LFCSLSCKVNHFETTKHGGK-----KLDQNSELLPSSYKTRSDVSVTEIEEDPQMTPDSV 184

Query: 188 LDLDY-----------PSAVSKTAAAVN--------------LVKKNRSGVKSLAAVL-- 227
           LD               +A S   +A+N              + KK +  +K  + VL  
Sbjct: 185 LDSPVSPRTWSGGSTNTTATSNGGSAINCKSSLIACTATTEFVKKKMKMKMKKSSCVLMP 244

[Close]

BLAST of ClCG01G003870 vs. TrEMBL
Match: K7LMR9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G030900 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.2e-47
Identity = 119/243 (48.97%), Postives = 143/243 (58.85%), Query Frame = 1


Query: 8   NSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRY 67
           NSVP WL IL  EKFFT C IH S KKN+K  FCL C ++IC  C   HR+H LLQIRRY
Sbjct: 5   NSVPNWLLILKEEKFFTRCLIHHSVKKNEKNIFCLDCCTSICLHCLPFHRSHVLLQIRRY 64

Query: 68  VYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHR--RGKRRGGSGNPCITCFRNLQYP 127
           +Y++V+RLGDA+ LLNCSLVQPYTTN+ KVVFLK R   G  R GS N CITC RNLQ P
Sbjct: 65  MYNDVLRLGDAQTLLNCSLVQPYTTNKTKVVFLKQRPPTGSHR-GSSNICITCDRNLQDP 124

Query: 128 YLFCSLSCKLNGKIEIINK--------QKRNYDHL--PPRSTTQTQ-------TPTSVLD 187
           Y+FCS+SCK++  + +I K         K  +  L    RS+   Q       T  SVLD
Sbjct: 125 YIFCSVSCKVHQHVLLITKSTSIKDTWNKHEFSVLLDKERSSENHQEIEDSQITTDSVLD 184

Query: 188 LDYPSAVS------KTAAAVNLVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVPQ 226
              P++ S       T+     V +N S  K   +V   P  +      T VNRRKGVP 
Sbjct: 185 SHSPTSTSLCTVSGSTSTNSGSVTENESLKKKRGSVDMVPEIW-----YTMVNRRKGVPH 241

[Close]

BLAST of ClCG01G003870 vs. TrEMBL
Match: I1J6H6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G078600 PE=4 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 113/246 (45.93%), Postives = 146/246 (59.35%), Query Frame = 1


Query: 7   NNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRR 66
           ++ VP+WL++LL EKF+  C IH+  KKN+K  +CL C  ++C  C S HR+H LLQIRR
Sbjct: 6   SSHVPRWLQVLLTEKFYNACIIHEGAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRR 65

Query: 67  YVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYP 126
           YVYH+VIRLGDA KL++C+ VQ YTTN AKVVFL  R   R   GSGN C TC R+LQ P
Sbjct: 66  YVYHDVIRLGDAAKLIDCNSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCGTCDRSLQDP 125

Query: 127 YLFCSLSCKLNGKIEIINKQ-----KRNYDHLPPRSTTQ-TQTPTSVLDLDYPSAVSKTA 186
           Y FCSLSCK+N  +           + NY  LP         TP SVL+   P+  ++T+
Sbjct: 126 YHFCSLSCKINYLVRTTGSLCNYLFECNYLPLPESGLDDGLMTPDSVLE---PAGSARTS 185

Query: 187 ------------------AAVNLVKKNRSGVKSLAAVLCRPRCFPISDI-ATAVNRRKGV 227
                             A   +V+K R+G  +     CRP C P+S+I A  +NRRKG 
Sbjct: 186 SGSGGYGGVDCRTTLACTATTEIVRKKRTGGSTFRPP-CRPACSPVSEISAGLMNRRKGN 245

[Close]

BLAST of ClCG01G003870 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein)

HSP 1 Score: 171.0 bits (432), Expect = 8.3e-43
Identity = 103/253 (40.71%), Postives = 138/253 (54.55%), Query Frame = 1


Query: 6   ENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIR 65
           E+   P WLE+LL +KFF  C  H+  KKN+K   C+ C   IC  C SSH +H LLQIR
Sbjct: 2   ESGEFPAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIR 61

Query: 66  RYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQY 125
           RYVY +V+R+ D  KL++CSL+QPYTTN +KVVF+  R   R+  GSGN CITC R+LQ 
Sbjct: 62  RYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQS 121

Query: 126 PYLFCSLSCKLNGKIEIINKQK------RNYDHLPPRSTTQTQTPTSVLDLDYPSAVSKT 185
           PYLFC LSCK++   ++I +Q+      R  + L       T TP+S L+   P+  ++T
Sbjct: 122 PYLFCCLSCKIS---DVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLE---PTGSNRT 181

Query: 186 A--------------------AAVNLVKKNRSGVKSLAAVLCRPRCFPISDIATA----- 227
           +                    A   +V+K RS +    +  CR     +S   T      
Sbjct: 182 SSESSGNEGEDMFWCQALACTATTEIVRKKRSSL----STTCRRVTEVVSTTNTEAPVNF 241

[Close]

BLAST of ClCG01G003870 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.6e-40
Identity = 98/254 (38.58%), Postives = 138/254 (54.33%), Query Frame = 1


Query: 11  PQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVYH 70
           P WL+ L  EKFF  C  H++ KKN++   CL C +++C  C  SHR H LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 71  EVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPYLFC 130
           +V+RL D +KL++CS VQ YT N AKVVF+K R   R+  G+GN C +C R+LQ PY+ C
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIHC 125

Query: 131 SLSCKLNGKIEIINKQKRNY--------------DHLPPR------STTQTQTPTS-VLD 190
           SL C    K++ + K+ R+               D++ P+           +TP S V+D
Sbjct: 126 SLGC----KVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 185

Query: 191 LDYP--------------SAVSKTAAAVNLVKKNRSG--VKSLAAVLCRPRCFPISDIAT 227
            D                +A +  A   ++V+K R+G  + + +A   +       DI+ 
Sbjct: 186 GDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDISA 245

[Close]

BLAST of ClCG01G003870 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39
Identity = 95/246 (38.62%), Postives = 131/246 (53.25%), Query Frame = 1


Query: 1   MVREGENN--------SVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSC 60
           MVREGE          + P WLE L+ E FF+ C IH++ +K++K  FCL C  ++C  C
Sbjct: 1   MVREGEEEEEMMMMMATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHC 60

Query: 61  FSSHRTHALLQIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRRGGSG 120
             SHR+H LLQ+RRYVYH+V+RL D EKL++CS VQPYT N AKV+FL  R+  R   S 
Sbjct: 61  LPSHRSHPLLQVRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRAKVSS 120

Query: 121 NPCITCFRNLQYPYLFCSLSCK----------LNGKIEIINKQKRNYDHLPPRSTTQTQT 180
           N C TC R LQ P+ FCSLSCK          L+  +  I++    ++ L      Q   
Sbjct: 121 NVCFTCDRILQEPFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMDGHDQLGE 180

Query: 181 PTSVLDLDYPSAVS-KTAAAVNLVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVP 228
            +++ D +    +S ++    N  KK +   K            P   +++  NRRKG P
Sbjct: 181 ISTMEDGEDILVISDESEQGNNSHKKEKKKSKKKKP---ESNYLPGMVLSSLGNRRKGAP 240

[Close]

BLAST of ClCG01G003870 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 124.8 bits (312), Expect = 6.9e-29
Identity = 79/225 (35.11%), Postives = 115/225 (51.11%), Query Frame = 1


Query: 4   EGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSA-ICFSCFSSHRTHALL 63
           E  N + P WL+ LL EKFF  C +H    K++   +CL C +  +C  C S H+ H  +
Sbjct: 5   EETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAI 64

Query: 64  QIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRRG-GSGNPCITCFRN 123
           QIRR  YH+VIR+ + +K L+ + VQ Y  N AKVVFL  R   R G G  N C  C+R+
Sbjct: 65  QIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRS 124

Query: 124 LQYPYLFCSLSCKLNGKIEIINKQKRNYDHLPPRSTTQTQTPTSVLDLDYPSAVSKTAAA 183
           L   + FCSL CK++G    I+K+KR             +   ++ D D     S ++ +
Sbjct: 125 LVDSFRFCSLGCKISG----ISKKKRK------------EWTNNLSDSD----DSYSSTS 184

Query: 184 VNLVKKNRSGVKSLAAVLCRPRCFPISDIATAV-NRRKGVPQRSP 226
           +  +KKN   + +       P   P+S +   +  RRKG+P R+P
Sbjct: 185 IGRLKKNDDIMNNSFT----PSTPPLSAVNRRIAKRRKGIPHRAP 205

[Close]

BLAST of ClCG01G003870 vs. TAIR10
Match: AT1G43000.1 (AT1G43000.1 PLATZ transcription factor family protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 78/226 (34.51%), Postives = 115/226 (50.88%), Query Frame = 1


Query: 4   EGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCR-SAICFSCFSSHRTHALL 63
           E ++   P WL  +L   +F  CSIH    K++   FCL C  +A C SC + HRTH ++
Sbjct: 2   ENDDVMTPPWLTPMLRADYFVTCSIHSQSSKSECNLFCLDCSGNAFCSSCLAHHRTHRVI 61

Query: 64  QIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRRGGSGN-PCITCFRN 123
           QIRR  YH V+R+ + +K ++ S +Q Y  N AK+ FL  R   R G S N  C  C RN
Sbjct: 62  QIRRSSYHNVVRVSEIQKHIDISCIQTYVINSAKIFFLNARPQCRTGKSLNKTCQICSRN 121

Query: 124 LQYPYLFCSLSCKLNGKIEIINKQKRNYDHLPPRSTTQTQTPTSVLDLDYPS-AVSKTAA 183
           L   +LFCSL+CKL G   + N +  N   L    + ++   + +++    S  +   + 
Sbjct: 122 LLDSFLFCSLACKLEG---VKNGEDPN---LTLFHSGKSDDSSKIINTGICSRLIDGISI 181

Query: 184 AVNLVKKNRSGVKSLAAVLCRP-RCFPISDIATAVNRRKGVPQRSP 226
           AV+  +   +GV S         R +P+       +RRKG+PQR+P
Sbjct: 182 AVDDQRSETAGVLSPETPSIESHRNYPMK------SRRKGIPQRAP 215

[Close]

BLAST of ClCG01G003870 vs. NCBI nr
Match: gi|778699974|ref|XP_011654791.1| (PREDICTED: uncharacterized protein LOC101221644 [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 3.1e-100
Identity = 194/252 (76.98%), Postives = 206/252 (81.75%), Query Frame = 1


Query: 1   MVREGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60
           MVRE ENNSVP+W+EILLGEKFFTPCS+H SCKKNDKTFFCLFCRSAICFSCFSSHRTHA
Sbjct: 1   MVREVENNSVPEWVEILLGEKFFTPCSLHISCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60

Query: 61  LLQIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLK-HRRGKRRG---------- 120
           LLQIRRYVYHEV+ LGDAEKL+NCSLVQPYTTNRAKVVFLK  RRGKRRG          
Sbjct: 61  LLQIRRYVYHEVVLLGDAEKLMNCSLVQPYTTNRAKVVFLKERRRGKRRGLRSSSSSSSS 120

Query: 121 ---------GSGNPCITCFRNLQYPYLFCSLSCKL----NGKIEIINKQKRNYDHLPPRS 180
                     +GN CITCFRNLQYPYLFCSLSCK+    N KIEIINKQKR Y++LPPR+
Sbjct: 121 GGGGWRSNNNNGNLCITCFRNLQYPYLFCSLSCKINQKVNEKIEIINKQKRKYENLPPRT 180

Query: 181 TTQTQTPTSVLDLDYPSAVSKTAAAVNLVKK-NRSGVKSLAAVLCRPRCFPISDIATAVN 228
           TT+ QTPTSVLD D+ S     AAAV L KK NRS VKSLAAVLCRPRCFPIS  ATAVN
Sbjct: 181 TTENQTPTSVLDRDFSS-----AAAVKLAKKNNRSCVKSLAAVLCRPRCFPISGFATAVN 240

[Close]

BLAST of ClCG01G003870 vs. NCBI nr
Match: gi|659074643|ref|XP_008437715.1| (PREDICTED: uncharacterized protein LOC103483060 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 3.1e-100
Identity = 194/245 (79.18%), Postives = 207/245 (84.49%), Query Frame = 1


Query: 1   MVREGENNSVPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60
           MVRE ENNSVP+W+EILLGEKFFTPCS+H SCKKNDKTFFCLFCRSAICFSCFSSHRTHA
Sbjct: 1   MVREVENNSVPEWVEILLGEKFFTPCSLHISCKKNDKTFFCLFCRSAICFSCFSSHRTHA 60

Query: 61  LLQIRRYVYHEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLK-HRRGKRRG---------- 120
           LLQIRRYVYHEVIRL DAEKL+NCSLVQPYTTNRAKVVFLK  RRGKRRG          
Sbjct: 61  LLQIRRYVYHEVIRLRDAEKLMNCSLVQPYTTNRAKVVFLKERRRGKRRGLRSSSGGSRS 120

Query: 121 --GSGNPCITCFRNLQYPYLFCSLSCKL----NGKIEIINKQKRNYDHLPPRSTTQTQTP 180
              + N CITCFRNLQYPYLFCSLSCK+    N KIEII+KQKRNY++LPPR+TT+TQTP
Sbjct: 121 NSNNTNLCITCFRNLQYPYLFCSLSCKINQKVNEKIEIISKQKRNYENLPPRTTTETQTP 180

Query: 181 TSVLDLDYPSAVSKTAAAVNLVKK--NRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVP 227
           +SVLD D+ SA    AAAV  VKK  NRS VKSLAAVLCRPRCFPISD ATAVNRRKGVP
Sbjct: 181 SSVLDRDFSSA----AAAVKSVKKKNNRSCVKSLAAVLCRPRCFPISDFATAVNRRKGVP 240

[Close]

BLAST of ClCG01G003870 vs. NCBI nr
Match: gi|731380155|ref|XP_010662296.1| (PREDICTED: uncharacterized protein LOC100852507 [Vitis vinifera])

HSP 1 Score: 206.1 bits (523), Expect = 6.6e-50
Identity = 122/246 (49.59%), Postives = 144/246 (58.54%), Query Frame = 1


Query: 10  VPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVY 69
           +P WLEILLGEKFF  C +H+  KKN+K  FCL C ++IC  C   HR H LLQIRRYVY
Sbjct: 8   IPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPHRHHRLLQIRRYVY 67

Query: 70  HEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPYLF 129
           H+VIRL DA+KL++CSLVQ YTTN AKVVFL  R   R   GSGN C TC R+LQ PYLF
Sbjct: 68  HDVIRLDDAQKLMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTCDRSLQDPYLF 127

Query: 130 CSLSCKLNGKIEI---INKQKRNYDHLP----------PRSTTQTQTPTSVLD----LDY 189
           CSL+CK++  + +     K   N++ LP               +  TP SVLD    L  
Sbjct: 128 CSLACKVHHTVNVKGGATKHLHNFEFLPLPDRARGEAFSELDDRQMTPESVLDSPVSLRT 187

Query: 190 PSAVSKTAAAVN-----------LVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGV 227
            S  S T  AV+            VKK RS V S+     RP   P SD A  +NRRKGV
Sbjct: 188 SSGSSSTGGAVSCRALACTATTEFVKKKRSSV-SVPRFPFRPILSPTSDNAGGINRRKGV 247

[Close]

BLAST of ClCG01G003870 vs. NCBI nr
Match: gi|297741160|emb|CBI31891.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 202.6 bits (514), Expect = 7.3e-49
Identity = 122/238 (51.26%), Postives = 142/238 (59.66%), Query Frame = 1


Query: 10  VPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVY 69
           +P WLEILLGEKFF  C +H+  KKN+K  FCL C ++IC  C   HR H LLQIRRYVY
Sbjct: 46  IPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPHRHHRLLQIRRYVY 105

Query: 70  HEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPYLF 129
           H+VIRL DA+KL++CSLVQ YTTN AKVVFL  R   R   GSGN C TC R+LQ PYLF
Sbjct: 106 HDVIRLDDAQKLMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTCDRSLQDPYLF 165

Query: 130 CSLSCKLNGKIEIINKQKRNYDHLP-----PRSTTQTQTPTSVLD----LDYPSAVSKTA 189
           CSL+CK+   ++ I    R + HL           +  TP SVLD    L   S  S T 
Sbjct: 166 CSLACKVRFALKFIINLLR-FLHLARGEAFSELDDRQMTPESVLDSPVSLRTSSGSSSTG 225

Query: 190 AAVN-----------LVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGVPQRSPL 227
            AV+            VKK RS V S+     RP   P SD A  +NRRKGVP RSPL
Sbjct: 226 GAVSCRALACTATTEFVKKKRSSV-SVPRFPFRPILSPTSDNAGGINRRKGVPHRSPL 281

[Close]

BLAST of ClCG01G003870 vs. NCBI nr
Match: gi|359496008|ref|XP_003635131.1| (PREDICTED: uncharacterized protein LOC100247272 [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 120/246 (48.78%), Postives = 144/246 (58.54%), Query Frame = 1


Query: 10  VPQWLEILLGEKFFTPCSIHKSCKKNDKTFFCLFCRSAICFSCFSSHRTHALLQIRRYVY 69
           +P WLEILLGEKFF  C +H+  KKN+K  FCL C ++IC  C   HR H LLQIRRYVY
Sbjct: 10  IPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPHRHHRLLQIRRYVY 69

Query: 70  HEVIRLGDAEKLLNCSLVQPYTTNRAKVVFLKHRRGKRR-GGSGNPCITCFRNLQYPYLF 129
           H+VIRL DA++L++CSLVQ YTTN AKVVFL  R   R   GSGN C TC R+LQ PYLF
Sbjct: 70  HDVIRLDDAQELMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTCERSLQDPYLF 129

Query: 130 CSLSCKLNGKIEI---INKQKRNYDHLP----------PRSTTQTQTPTSVLD----LDY 189
           CSL+CK++  + +     K   N++ LP               +  TP SVLD    L  
Sbjct: 130 CSLACKVHHTMNVKGSATKHLHNFEFLPLPDRARGEAFSELDDRQMTPESVLDSPVSLRT 189

Query: 190 PSAVSKTAAAVN-----------LVKKNRSGVKSLAAVLCRPRCFPISDIATAVNRRKGV 227
            S  S T  A++            VKK RS V S+     RP   P SD A  +NRRKGV
Sbjct: 190 SSGSSSTGGALSCRALACTATTEFVKKKRSSV-SVPRSPFRPIFSPASDNAGGINRRKGV 249

The following BLAST results are available for this feature:

BLAST of ClCG01G003870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKT3_CUCSA	2.2e-100	76.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160750 PE=4 SV=1	[more]
F6HP95_VITVI	5.1e-49	51.26	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00150 PE=4 SV=...	[more]
A0A061G3H1_THECC	1.3e-47	45.56	PLATZ transcription factor family protein, putative OS=Theobroma cacao GN=TCM_01...	[more]
K7LMR9_SOYBN	8.2e-47	48.97	Uncharacterized protein OS=Glycine max GN=GLYMA_11G030900 PE=4 SV=1	[more]
I1J6H6_SOYBN	1.8e-46	45.93	Uncharacterized protein OS=Glycine max GN=GLYMA_01G078600 PE=4 SV=2	[more]

BLAST of ClCG01G003870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60670.1	8.3e-43	40.71	PLATZ transcription factor family protein	[more]
AT2G12646.1	6.6e-40	38.58	PLATZ transcription factor family protein	[more]
AT1G31040.1	1.1e-39	38.62	PLATZ transcription factor family protein	[more]
AT1G32700.1	6.9e-29	35.11	PLATZ transcription factor family protein	[more]
AT1G43000.1	2.2e-27	34.51	PLATZ transcription factor family protein	[more]

BLAST of ClCG01G003870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699974\|ref\|XP_011654791.1\|	3.1e-100	76.98	PREDICTED: uncharacterized protein LOC101221644 [Cucumis sativus]	[more]
gi\|659074643\|ref\|XP_008437715.1\|	3.1e-100	79.18	PREDICTED: uncharacterized protein LOC103483060 [Cucumis melo]	[more]
gi\|731380155\|ref\|XP_010662296.1\|	6.6e-50	49.59	PREDICTED: uncharacterized protein LOC100852507 [Vitis vinifera]	[more]
gi\|297741160\|emb\|CBI31891.3\|	7.3e-49	51.26	unnamed protein product [Vitis vinifera]	[more]
gi\|359496008\|ref\|XP_003635131.1\|	1.3e-48	48.78	PREDICTED: uncharacterized protein LOC100247272 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box
IPR006734	DUF597

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G003870.1	ClCG01G003870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 26..75 score: 9
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 65..135 score: 5.1
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 4..226 score: 5.9
None	No IPR available	PANTHER	PTHR31065:SF1	SUBFAMILY NOT NAMED	coord: 4..226 score: 5.9
None	No IPR available	unknown	SSF57845	B-box zinc-binding domain	coord: 25..72 score: 7.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G003870	Csa5G160750	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G003870	Cla011562	Watermelon (97103) v1	wcgwmB142
ClCG01G003870	Cla97C01G004000	Watermelon (97103) v2	wcgwmbB089
ClCG01G003870	Bhi12G000388	Wax gourd	wcgwgoB193
ClCG01G003870	CSPI05G06590	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G003870	Cucsa.302050	Cucumber (Gy14) v1	cgywcgB520
ClCG01G003870	CmaCh15G011440	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G003870	CmoCh15G012050	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G003870	Lsi09G004040	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G003870	CsGy5G003930	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G003870	MELO3C034000.2	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G003870	Carg27389	Silver-seed gourd	carwcgB0172
ClCG01G003870	CsaV3_5G004000	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G003870	Cucumber (Gy14) v2	cgybwcgB192
ClCG01G003870	Melon (DHL92) v3.6.1	medwcgB409
ClCG01G003870	Silver-seed gourd	carwcgB0756
ClCG01G003870	Silver-seed gourd	carwcgB0843
ClCG01G003870	Silver-seed gourd	carwcgB0899
ClCG01G003870	Cucumber (Chinese Long) v3	cucwcgB211
ClCG01G003870	Watermelon (97103) v2	wcgwmbB094
ClCG01G003870	Watermelon (Charleston Gray)	wcgwcgB041
ClCG01G003870	Cucumber (Gy14) v1	cgywcgB557
ClCG01G003870	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G003870	Cucurbita maxima (Rimu)	cmawcgB524
ClCG01G003870	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G003870	Cucurbita moschata (Rifu)	cmowcgB283
ClCG01G003870	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G003870	Cucurbita moschata (Rifu)	cmowcgB522
ClCG01G003870	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G003870	Wild cucumber (PI 183967)	cpiwcgB211
ClCG01G003870	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G003870	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G003870	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G003870	Watermelon (97103) v1	wcgwmB119
ClCG01G003870	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G003870	Cucurbita pepo (Zucchini)	cpewcgB200
ClCG01G003870	Cucurbita pepo (Zucchini)	cpewcgB637
ClCG01G003870	Cucurbita pepo (Zucchini)	cpewcgB780
ClCG01G003870	Bottle gourd (USVL1VR-Ls)	lsiwcgB394