Lsi09G001550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G001550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	BnaCnng71730D protein
Location	chr09 : 1604310 .. 1611735 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTGTTCCAGGTTCAACCAAAACCTAAATCACATTCATATTTCATAAATTACATGTAGAAAAATTACACTTAGACTCATATCCCAAAAGAAATACATTTAAGACAGCAAAGACCAAAACAGTAGAAAAGTTACAATTATGATAGGCAAAGGCCAAAACAGAACCTTGCAAGAAATAAAGTTCTGGAAAAAAAAAAATTGTGCATCTCATGGTTGTAATATGTACAGCAAGAAAACGATCACCAGAATTTTTATTGTTACTTATAGATTAATTATGCAGTCATATTATAAGAGGACCATGACAAGTATCATAAAAAAGTTGGTACGATGCCCAGAGGTAAATTTTTTACCAGAACATCTTTTGTAAGATTCCAAAGCTGGCGTACTATGGTAACCCTGTCCTTCAATGACGGTATCTCTCCGAGTACATAAGACTTGATCCCACAGCATATAAGATGAAACATCAATTAGTACTTTGATCTATCAGCTAAATTACCAGAAAGTTTTCATACTTGCAGTGGTTCAGAGATATAAGCGAAAGAAGGAAAAAGAAGAAAAGACAGAAGTCAGGAGCCAGGAGCTTCTCGCAAAAAAATGTTCCAAAACATACTGGTAAAGTATTTCGAAAGAGTTACTTACAGCAATAACAAGGTCATGTTCTCTCTCTGACTTACTAATGTCTTTGCTAAGCGCCTGAATGCTGTCATAACCATGAATAAGTGGCAAGTTCTTTAGGCCTAAAACAAATGCAAGAAGTAAATTTTGATGTATTTATGAGTAGAGTACTAAAACAAGTCTGCTACAACAAGGACTGAACATGCATTATTTTTTCCATTGTAGCCAGCTAATTTATTTCTTTTAATATCCCAGAATGTTTGGGCCAATTGCGCACGCCTCGACTATTCTTATGAGTCAACTGCTCGCTCTACTACATTTGGTTGTCAAGAAAACTCGTAGCATATTAAATCCTACATAGGTGGTCATCATGGCTTGAACTCATTCCCTCTAAGCTCTTCGCCAACTAATTTTAATATTGTAGTTTTTTAATATAATTTTAACAATGTTATCCACTTATCCCACATGCTTTATTTTCTGATTATCATTTATCTAACAGATTTTAAAAAATAAGAAACCTGAGTATATTACTGACAAAACGCAAAAACAGCCCAAGGGCCGGGAAGAGGAATCCCACTCCCAACAACTTCAAAAAGAGAGCTTTTCAATTGATCTAATAGAAATAAAAGGGTTTTTCACAGATGATAACTTAATTACACTCCGTATTACCAATTCGAAATTACAATTTGCAGCAAGAAAATTGAAAATTCCTCAATACCTTGTATCAAACTCCGCCCAGCACGTTGCATTGACTGTGATGGTTCTACTATATTAACTTTCTCCATAGAATGGGGCCAGACCTCTCGCAGAGCCCTAGAAAATTGAATTAGATCACAATGTAAATAGCTATTATAGGTTTATAACAGTCCATGCATTCTACATCAAATAAATGAATATCACTTTTTACCAGAAACCTGAACCAGTCCCAGCACCAAAATCCAATACATTAGATGGAGAGAAATCGGGTAGTCTTCTACGAACCTAAGCGCATAACACGTGAGAAAAAAAAAAAAAGTTATCAGAAAATCATTCCTAATTATATTCCATTGCGTTCTCAAATACAATCCATTAAGCTGTTTTATCTCTAGCAATTCCACTTCATTTCTCAATTTCCTGAAGATGACAGATAGATATTTAGTTTAATCAGTTGGTAAGTAAGCAGAAACCTATTGTACCTCGTTAAGAACTCTGTAGCAAGCAGAGAAAACGGCAGGCATACGAGAGGCGACGTAAGCAACGGTCTCATCGTCTGTGTACTGAAAGCCAATATCACCATAGCAGCTCTTAATCTTCCAGCGCTTGGATTGCTCTACGGATTTCAGAGGATCTTCAACAAGTTCCTTTGAAGTGGTTGCTGCCAGCTGCAGATTAACATCCTTGATGCCACTGAATGATTCAGACAGCCTCAGCACCTTCCTCTTCAAGTGAGGCACTTCTTGGTCTGGAGTGCACAGACAACGCCAGAGATTCAGGCACAAAAAGTCACACAAATAAAGAAACACACTCGCAGAGAGCTTCGAGGAAGAAACGAATAGGAGAAGTATAACCTCGAAGGTACTTCTTGATAGCGCGGCGGAGGCGGACCGGGACGACGAGACAACGCTGTGATTGTTTGGCGGCGGAGCGGAGAATCTCCGGTGTGATAACTTTTTGGGATGTTTCTTGCAGTAGAGACGCCATTGTCGATCACGACGGTCTGAGCAGCCACGAAGATTTTACCGAATTTGTGGGTTTTAGTTTTAGGGCTTTGAGGTCCAATCAACAACGGTTTTCTTTTAAGAAGAAATAATAAATAGACTAAATCAAACCCATCTCGTGTTGCCCGACTCATCTTGATTATTTTAGCTTATGTTTACAGGTTCATCTGTAATTGTAACTAAAAGTGGAGTCTATTATACTATTTGTAATAAAATTTTATAATCTGATTGAACTTGGGAAGGTTATCAATCCAATTGTGTTTGAATATACAATAGGACCCACATATTTAGTAAAAATATTTGTGTCTCAATTTCTATCATTTGCCCTTTGAAATGAGTTGAGACCGCTTTACAGATAGAATATCGACAGCAATTTCGGCCGATTTAGCAATTTTATAACCTAAATTACAACATTTTTCATTACCCCATGTAAACATGGCCTAAGTTGAGGGGAAAAAGAAAATAAGTCAGGTATACCCAAGTAAAACGTAATAAATTAATGGTAATTTAAAAAGTTGGCTCCATTTGATTATGTTTGGTGTTATTTACTTCCGTTCTATACCTGTATTGACATTTGAGGCCCACTTCGAAATTTGTAATAAAAAAAACTCAATCTATTTGAAGAGTGAAGGGTGATCAATCCAATTGCATTTGGAAATTACGTTATTATTACCATTACCTTTACGATTATAGTATTGTTACAATTTAACATTACGGTTATGCCTCATTATGATTGATCTATCAATGGAACCTCGTTATGATTACCACCAATTTTCATTACGAATTGATGAACTTGGCCTAATTTCAATAGAAATTGAATAGGCTAAATTATAATATATACTCTTGTACTTTGTCTTTTGTTTCAAAAACATTTCTATACTTTCATAAATTGCAATACCGCTTAACTTTCATAAATGTTTCAAAACTGTCATTTAATTAGAATTCTTTAGAATTTTGAACAAAAATTGAGACTCATAGTTGTGTGAAAATGACCTAAAACAATGTAGTGATCTAAATTTTCTTTTTAGGTAAACGTCATACCATTTCATATCTCAATTTTTGTCCAAAATTTTAAAGAATTTATACCTCAAAGGTATTTTTGAGGCAGTTGTGAAAGTTCAAGGAAAATATTGGTATTTTTTAAAATATATGGATATTTTTTAAATAAATGTTAAAGTTCAAAGATATTTTCTACAATTTAACTATATATATAGTTAAACCAAATTTAAGCTTAATTTTAAAAAACCAAATAGTTATCAAGTGAAATCAGAATTTTAAAAACTTTTTTTTTCTTTCTAAAATTTGACTAATAATTCAAATATCGCTTATATAAGACTATTTATAAAGAAATTGGGAGAAAAATAAGCACAATTTTCAAAAATAGAAAATTATTAAACGGACAATTTTTTCAACTTTAGAAAGTGTTTGGGCTGCTGAGTTGAATTATAAAGTGTTAAGTTAATATGTTGGTATTAAGATGTTTGCGTTTAAAGTGTAAAGTTGTTTAGTTGGAGTTAGAGAAAGGGGAAAAGAAACAGGAGAAAATGAATTTTCTCGATAAATATGCAAACTTCGATGGTGAACACTATTGAAACTAGTGGAGTTGAGTTATTTAACACATACTTATGAAGTCGGTGAGTTAAATGCCTCCTTAGTGTGTTAAAATTAATCTATCTACTTCTAATTTTGTAACAATTTAATCTTGAAATTTTAGTAAATAACACTTTAATCTCAATCAAAATTAGTGTCAATTTTTATCGTGTAATAACTCAATTAAGATATTTGGTCCATTCATTTATTGATATACATGTGTAAACAATTTGACTGAATCTAGATAGTATTTTTTCACAATATGAACTAGTGTTACAAACTTACAAATTTTAAAGTTGAGAGACTTATTTGGAGCAAATTATTAGTATATGCTACTTCCATTCAACATTTAGTAAGTATATGCATCTTTTATTTTATTCTACAATTTCCACACATTGCTTAAAATATTTCTATGGTTTTTTTTTAAAGAAAAATATGGAATAAAAATGTTTTAAAGAAACATAAATAAAAATAGGACCGTTTTCAAATATAGAAAAATGAACCAAACTATTTACAAATATAAAAAAAATTATACAATAAAATTCTAGAATTTTATCGCAGTTTATCAGCAAAAATTTTATATATTTGTAAATAATTTAATTTTTCTTTTTGTTTATAACAATTTTCCATAAAAAAATAAGGAAAATTGTTTTAAATGAAAAAATAATGAAACTATTTACTAATATAGCAAAAAGTACATATTGGGATAAGTAAACATTTTGTCATTGTGCTATATTTGTAAATAGTTTTATTATTTTATTATTTATGAAAAACTCCCCAAAAATAACTATATTCGAAACATATGCTTAAGTATATTAAAAAAAAAATGACATATTTTCCTCTTACAAAGTTTCTTATTTCCATAAAATTGAGGCATTTTTAAACATTGGTTTAGAGTTAAAAGCGCAGCCAAGTTGCACCGCATTGGTTCCTTCCGTCGCCATTTGCTTGAAATCGCCGTCACTTTCACGAAGATCTTCCTCAACCATCTCCGCAGACTGATCCCACAGAAACCCACCAACAAAACCGACCCATCGGCGATCGATATGGGTGGAGCTCAAGCCATCAAAAGGATACCTCGCATCAAGTTCCCCAAACGACATCCCAACCCCTCTGGTCCACCTCCCTCTTCCCTCTTTCCTCATTACTTTTCTTTATTTTTGATCGACGTTCTTCCTAAACTAAGCAAATCCTCAAGACCCATATGAACATCTTCGCGTGTTTGTGTGTGTTTCCCCTTTTTCCCGCTGGTGTTTGTATTTGATCGTCTCCCTGTTCTTCCTTTCGTTGATCTTTGACTTGTTCTTTGACTTAGACCTGTATTTATGCCTTTGATTCTGTTCTTGATTGCTTAGAGTTGGGGTTTCCTCTCTAGTACGGTTAGATGTCTAGCCTGGTTTAGCTTGTTAATGGAGAATCTGGTGCATTTATTTGAACTGATGTGGGGACTAAAGATTTTTCTTCTTTTCAATTTATTGGTTTTCTCTTATCTTTGCTTTTTCCACATTTGATTAGCATTTTGTTAACCTAGATTTTGAAATCTAATGACCCAGATTAGTAACCCAAGCCTCAGAGAGTTTGGAATGAAACATGATTCAAAAAGTGGAGAGGAATGGATTTTGTGAGAATTTCAAGTTGACTCATAGATTTTGTTTATTTGAAGAGGTTTATAGGAGAGAGAAGTTGATTTTTATGCTTTTTCTGATTCTATTAAAGCCTTAATATCTCTAAGGACTACACTCGGAATGATTAGAATTGAGGCTCAAGTACTACCTATTTTTGTTTGGCCTATATGCATACTTTTATTGGTATCTTGTGAAATTGAGAAATCCTTCTATTATATATTTCTATGCCTATTTCAGAATGTCTATTGCTATTCAATGAAATCTATTTAACAACTCTGTTTACCTAACATTACCATCTCTTTAAAAAGAAAGAAAAAGAAGAGATTGGCCATCTATTATAATTTTTTATTTGTTGCTAACTTGATTTAATAGAAACCAACCTGATGCTGTTGGACGATTGTTGATGAGTTGAAGCGTCGTATAATATATCGATCATCGCATTCTGCCTTTGTGATGTGTTTTCTAAAGTATCTGTCAGTCATTTGATAAAAGTAGTCAATACTGAAGAAAGTTTTACAGGTTCTACTTCCAAGACTCCATCAAGTAGTGGGGGGGATGATCAAATTTTCTTCTCATCTTTAGAACAAGCTGCCTCCAAAACTGTTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTGTTTTGGTAACAGAACCTATTCATATTTGGTGGTTGCTTGCTTTAATAATTGCTGATTGATCTGTTGTTTCTTATAATGCAATGTGCTTCAAGCATTCAATTTGGACTCTTCTTATTGCTAGAGAAGGAAACATTTCACCATGAGATACAAACCTTAAACCTTAGAAAATGTCATCTGGTTTTATCATGTGCTTTAATACGAGTAACATTGTCAAAGTAATGACTAGCGAGTCAAAAGCACGAATCTTTGGTTTGTGATTAGAAAGTTATGTTTAGTTCGTCATAGTTTGTTCGTTCATGTAACGAGGAGTTGATGCCTTTTTGTCAAGTATTATACATTTCATTTGGATGTGGAAACGTTAACTTCTAGCATGACAATGTACATTTAGTATATAAGAAGGACGAACACTTTAGTTTGGCTAGCACGTCCATATTTGGCACGCTTCTAACACTTGAACTCTCCAACACTTATTGGACATGTATTGAATACTTTTTTGTACAATAGATGTGTTAGACACTAGTTGTACAAATTCAAAGTAGGTCCACCATTTGTTAGACATGCATCAAACACTAATCAAGGATAAACATATATGGCAATTGATAGATTTTGAGAGCGAACAACATCAAATTAATTTTTAAGCATATAAATGCATAAACTCATTAACTTTGAATTTTCTAATATAAAAATTATATCTATTTTAATAAATGTGTCTTGCCAAGTTCATGTCCCTGATTTTAAGAAAAGATAACGTGTTGTCGTGTCAGTGTCGTGTCATATCCGTACTTCTTAGTTTAGCACAAAGCTTGTATGCCCCACCCATGAAATCATTTCGAGTTTTGGTTTCTAGAATGCTCTTCTTCTATGAATCAATTCTTCCTTCTTTTGCTTTTGCTATGGGATATTTTGACTCACAATTCTACAACTTATTTGCAGCTGGGTGGCTGCATCTGATGAGCTTTGAGAGTGCATAATACTATGGTTGTGGTTCATTCTTTTCTACTATTTCATGTTATAGTTTCTATTTTTGAACTTGAATCATATCATTGTGGAATTTCTATATGTAAAAGAAATGCTTTGATTTAAATCTTCTTTAATAAGAGGAAACTCTATACTTCAAATCGAATGCAGCTTTAAGACTCAAATTTACTTTATTCTTTTGGTGTTTCTACCAAACAGATGTTGTGATGTTGTCAGCGAAGGGATGGGTTTGGTCAAGAATAATTGTGTTTGA

mRNA sequence

ATGCGATTAATTATGCAGTCATATTATAAGAGGACCATGACAAGTATCATAAAAAAGTTGGTACGATGCCCAGAGTGGTTCAGAGATATAAGCGAAAGAAGGAAAAAGAAGAAAAGACAGAAGTCAGGAGCCAGGAGCTTCTCGCAAAAAAATGTTCCAAAACATACTGGTAAAATTTTAAAAAATAAGAAACCTGAGTATATTACTGACAAAACGCAAAAACAGCCCAAGGGCCGGGAAGAGGAATCCCACTCCCAACAACTTCAAAAAGAGAGCTTTTCAATTGATCTAATAGAAATAAAAGGGTTTTTCACAGATGATAACTTAATTACACTCCGTATTACCAATTCGAAATTACAATTTGCAGCAAGAAAATTGAAAATTCCTCAATACCTTGTATCAAACTCCGCCCAGCACGTTGCATTGACTGTGATGAAACCTGAACCAGTCCCAGCACCAAAATCCAATACATTAGATGGAGAGAAATCGGCAAGCAGAGAAAACGGCAGGCATACGAGAGGCGACGTAAGCAACGGTCTCATCGTCTGTGTACTGAAAGCCAATATCACCATAGCAGCTCTTAATCTTCCAGCGCTTGGATTGCTCTACGGATTTCAGAGGATCTTCAACAATGAGGCACTTCTTGGTCTGGAGTGCACAGACAACGCCAGAGATTCAGGCACAAAAAGTCACACAAATAAAGAAACACACTCGCAGAGAGCTTCGAGGAAGAAACGAATAGGAGAACGCGGCGGAGGCGGACCGGGACGACGAGACAACGCTGTGATTGTTTGGCGGCGGAGCGGAGAATCTCCGGTTAGAGACGCCATTGTCGATCACGACGGTCTGAGCAGCCACGAAGATTTTACCGAATTTGTGGGTTTTAGTTTTAGGGCTTTGAGGTCCAATCAACAACGAGTTAAAAGCGCAGCCAAGTTGCACCGCATTGGTTCCTTCCGTCGCCATTTGCTTGAAATCGCCGTCACTTTCACGAAGATCTTCCTCAACCATCTCCGCAGACTGATCCCACAGAAACCCACCAACAAAACCGACCCATCGGCGATCGATATGGGTGGAGCTCAAGCCATCAAAAGGATACCTCGCATCAAGTTCCCCAAACGACATCCCAACCCCTCTGGTCCACCTCCCTCTTCCCTCTTTCCTCATTACTTTTCTTTATTTTTGATCGACGAGAGAGAAGTTGATTTTTATGCTTTTTCTGATTCTATTAAAGCCTTAATATCTCTAAGGACTACACTCGGAATGATTAGAATTGAGGCTCAACGTCGTATAATATATCGATCATCGCATTCTGCCTTTGTGATGTGTTTTCTAAATCATTTGATAAAAGTAGTCAATACTGAAGAAAGTTTTACAGGTTCTACTTCCAAGACTCCATCAAGTAGTGGGGGGGATGATCAAATTTTCTTCTCATCTTTAGAACAAGCTGCCTCCAAAACTGTTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTGTTTTGGAAACATTTCACCATGAGATACAAACCTTAAACCTTAGAAAATGTCATCTGGTTTTATCATGTGCTTTAATACGAGTAACATTGTCAAAATGTTGTGATGTTGTCAGCGAAGGGATGGGTTTGGTCAAGAATAATTGTGTTTGA

Coding sequence (CDS)

ATGCGATTAATTATGCAGTCATATTATAAGAGGACCATGACAAGTATCATAAAAAAGTTGGTACGATGCCCAGAGTGGTTCAGAGATATAAGCGAAAGAAGGAAAAAGAAGAAAAGACAGAAGTCAGGAGCCAGGAGCTTCTCGCAAAAAAATGTTCCAAAACATACTGGTAAAATTTTAAAAAATAAGAAACCTGAGTATATTACTGACAAAACGCAAAAACAGCCCAAGGGCCGGGAAGAGGAATCCCACTCCCAACAACTTCAAAAAGAGAGCTTTTCAATTGATCTAATAGAAATAAAAGGGTTTTTCACAGATGATAACTTAATTACACTCCGTATTACCAATTCGAAATTACAATTTGCAGCAAGAAAATTGAAAATTCCTCAATACCTTGTATCAAACTCCGCCCAGCACGTTGCATTGACTGTGATGAAACCTGAACCAGTCCCAGCACCAAAATCCAATACATTAGATGGAGAGAAATCGGCAAGCAGAGAAAACGGCAGGCATACGAGAGGCGACGTAAGCAACGGTCTCATCGTCTGTGTACTGAAAGCCAATATCACCATAGCAGCTCTTAATCTTCCAGCGCTTGGATTGCTCTACGGATTTCAGAGGATCTTCAACAATGAGGCACTTCTTGGTCTGGAGTGCACAGACAACGCCAGAGATTCAGGCACAAAAAGTCACACAAATAAAGAAACACACTCGCAGAGAGCTTCGAGGAAGAAACGAATAGGAGAACGCGGCGGAGGCGGACCGGGACGACGAGACAACGCTGTGATTGTTTGGCGGCGGAGCGGAGAATCTCCGGTTAGAGACGCCATTGTCGATCACGACGGTCTGAGCAGCCACGAAGATTTTACCGAATTTGTGGGTTTTAGTTTTAGGGCTTTGAGGTCCAATCAACAACGAGTTAAAAGCGCAGCCAAGTTGCACCGCATTGGTTCCTTCCGTCGCCATTTGCTTGAAATCGCCGTCACTTTCACGAAGATCTTCCTCAACCATCTCCGCAGACTGATCCCACAGAAACCCACCAACAAAACCGACCCATCGGCGATCGATATGGGTGGAGCTCAAGCCATCAAAAGGATACCTCGCATCAAGTTCCCCAAACGACATCCCAACCCCTCTGGTCCACCTCCCTCTTCCCTCTTTCCTCATTACTTTTCTTTATTTTTGATCGACGAGAGAGAAGTTGATTTTTATGCTTTTTCTGATTCTATTAAAGCCTTAATATCTCTAAGGACTACACTCGGAATGATTAGAATTGAGGCTCAACGTCGTATAATATATCGATCATCGCATTCTGCCTTTGTGATGTGTTTTCTAAATCATTTGATAAAAGTAGTCAATACTGAAGAAAGTTTTACAGGTTCTACTTCCAAGACTCCATCAAGTAGTGGGGGGGATGATCAAATTTTCTTCTCATCTTTAGAACAAGCTGCCTCCAAAACTGTTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACACCCTTGTCCAATGAGGAGATTGAGGCTGTTTTGGAAACATTTCACCATGAGATACAAACCTTAAACCTTAGAAAATGTCATCTGGTTTTATCATGTGCTTTAATACGAGTAACATTGTCAAAATGTTGTGATGTTGTCAGCGAAGGGATGGGTTTGGTCAAGAATAATTGTGTTTGA

Protein sequence

MRLIMQSYYKRTMTSIIKKLVRCPEWFRDISERRKKKKRQKSGARSFSQKNVPKHTGKILKNKKPEYITDKTQKQPKGREEESHSQQLQKESFSIDLIEIKGFFTDDNLITLRITNSKLQFAARKLKIPQYLVSNSAQHVALTVMKPEPVPAPKSNTLDGEKSASRENGRHTRGDVSNGLIVCVLKANITIAALNLPALGLLYGFQRIFNNEALLGLECTDNARDSGTKSHTNKETHSQRASRKKRIGERGGGGPGRRDNAVIVWRRSGESPVRDAIVDHDGLSSHEDFTEFVGFSFRALRSNQQRVKSAAKLHRIGSFRRHLLEIAVTFTKIFLNHLRRLIPQKPTNKTDPSAIDMGGAQAIKRIPRIKFPKRHPNPSGPPPSSLFPHYFSLFLIDEREVDFYAFSDSIKALISLRTTLGMIRIEAQRRIIYRSSHSAFVMCFLNHLIKVVNTEESFTGSTSKTPSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEEIEAVLETFHHEIQTLNLRKCHLVLSCALIRVTLSKCCDVVSEGMGLVKNNCV

Homology

[Close]

BLAST of Lsi09G001550 vs. TrEMBL
Match: A0A0A0KMD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148700 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.3e-15
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKTPSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEEIEA 508
           IK      S +GSTSKTPSS GGDD +FFSSLE+ ASKTVGGKASLQPKRTPLSNEEIEA
Sbjct: 13  IKFPKRHLSSSGSTSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQPKRTPLSNEEIEA 72

Query: 509 VL 511
           +L
Sbjct: 73  IL 74

[Close]

BLAST of Lsi09G001550 vs. TrEMBL
Match: R0GU71_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10007685mg PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 56/171 (32.75%), Postives = 76/171 (44.44%), Query Frame = 1


Query: 357 MGGAQAIKRIPRIKFPKRHPNPSGPPPSSLFPHYFSLFLIDEREVDFYAFSDSIKALISL 416
           M   Q +KRIPRIKFP+RH NPS                      +F+    S  + I  
Sbjct: 1   MNVVQGLKRIPRIKFPQRHVNPSA-------------------RFEFFVCVRSSSSRIRY 60

Query: 417 RTTLGMIRIEAQRRIIYRSSHSAFVMCFLNHLIKVVNTE---ESFTGSTSKTPSSSGGDD 476
              L ++         Y       V+     +I  V+ +    +F  S  KT       D
Sbjct: 61  WIELFVLDYFVLDLFPYELKDLNSVLALFLVMISFVDGKLHAMNFAASEGKT-------D 120

Query: 477 QIFFSSLEQAASKTVGGKASLQPKRTPLSNEEIEAVLETFHHEIQTLNLRK 525
            +FFS+L     KT+GGKAS QPKRTP+ NEE+EA+L +   E+ T   RK
Sbjct: 121 TLFFSNLN--VPKTMGGKASSQPKRTPVPNEEMEAILNSL--ELLTKGDRK 141

[Close]

BLAST of Lsi09G001550 vs. TrEMBL
Match: I3TAD6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.9e-06
Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKTPSSSGGDD--QIFFSSLEQAASKTVGGKASLQPKRTPLSNEEI 508
           IK  N     +GS S+ P+ S   D    FFSS E  AS T+GGKASLQPKRTP+SNEEI
Sbjct: 13  IKFPNRHSKSSGSASEAPALSSASDASSSFFSSSE--ASTTLGGKASLQPKRTPVSNEEI 72

Query: 509 EAVL 511
           EAVL
Sbjct: 73  EAVL 74

[Close]

BLAST of Lsi09G001550 vs. TAIR10
Match: AT4G23885.1 (AT4G23885.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 9.0e-06
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 1


Query: 466 PSSSGGDDQI-------FFSSLEQAASKTVGGKASLQPKRTPLSNEEIEAVL 511
           PS+S G  Q+       FFS+L     KT GGKAS QPKRTP+SNEE+EA+L
Sbjct: 22  PSASEGKSQVANEADTLFFSNLNNI-QKTTGGKASSQPKRTPVSNEEMEAIL 72

[Close]

BLAST of Lsi09G001550 vs. NCBI nr
Match: gi|449452210|ref|XP_004143853.1| (PREDICTED: uncharacterized protein LOC101205349 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 7.6e-15
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKTPSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEEIEA 508
           IK      S +GSTSKTPSS GGDD +FFSSLE+ ASKTVGGKASLQPKRTPLSNEEIEA
Sbjct: 13  IKFPKRHLSSSGSTSKTPSSHGGDDHVFFSSLEKDASKTVGGKASLQPKRTPLSNEEIEA 72

Query: 509 VL 511
           +L
Sbjct: 73  IL 74

[Close]

BLAST of Lsi09G001550 vs. NCBI nr
Match: gi|659074109|ref|XP_008437426.1| (PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-14
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKTPSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEEIEA 508
           IK      S +GSTSKTPSS+GGDD IFFSSLE+ ASKTVGGKASLQPKR PLSNEEIEA
Sbjct: 13  IKFPKRHPSSSGSTSKTPSSNGGDDHIFFSSLEKDASKTVGGKASLQPKRIPLSNEEIEA 72

Query: 509 VL 511
           +L
Sbjct: 73  IL 74

[Close]

BLAST of Lsi09G001550 vs. NCBI nr
Match: gi|502139040|ref|XP_004503624.1| (PREDICTED: uncharacterized protein LOC101498634 isoform X2 [Cicer arietinum])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKT---PSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEE 508
           IK  N     +GSTS+T   PS+SGG    FFSS + + + T+GGKASLQPKRTP++NEE
Sbjct: 14  IKFPNRHHKSSGSTSETHVSPSTSGGSLS-FFSSSKASTTTTLGGKASLQPKRTPVTNEE 73

Query: 509 IEAVL 511
           IEAVL
Sbjct: 74  IEAVL 77

[Close]

BLAST of Lsi09G001550 vs. NCBI nr
Match: gi|502139604|ref|XP_004503831.1| (PREDICTED: uncharacterized protein LOC101508778, partial [Cicer arietinum])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKT---PSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEE 508
           IK  N     +GSTS+T   PS+SGG    FFSS + + + T+GGKASLQPKRTP++NEE
Sbjct: 27  IKFPNRHHKSSGSTSETHVSPSTSGGSLS-FFSSSKASTTTTLGGKASLQPKRTPVTNEE 86

Query: 509 IEAVL 511
           IEAVL
Sbjct: 87  IEAVL 90

[Close]

BLAST of Lsi09G001550 vs. NCBI nr
Match: gi|502139038|ref|XP_004503623.1| (PREDICTED: uncharacterized protein LOC101498634 isoform X1 [Cicer arietinum])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1


Query: 449 IKVVNTEESFTGSTSKT---PSSSGGDDQIFFSSLEQAASKTVGGKASLQPKRTPLSNEE 508
           IK  N     +GSTS+T   PS+SGG    FFSS + + + T+GGKASLQPKRTP++NEE
Sbjct: 52  IKFPNRHHKSSGSTSETHVSPSTSGGSLS-FFSSSKASTTTTLGGKASLQPKRTPVTNEE 111

Query: 509 IEAVL 511
           IEAVL
Sbjct: 112 IEAVL 115

The following BLAST results are available for this feature:

BLAST of Lsi09G001550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G001550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMD8_CUCSA	5.3e-15	77.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148700 PE=4 SV=1	[more]
R0GU71_9BRAS	2.0e-06	32.75	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10007685mg PE=4 SV=1	[more]
I3TAD6_LOTJA	5.9e-06	59.38	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of Lsi09G001550 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23885.1	9.0e-06	55.77	unknown protein	[more]

BLAST of Lsi09G001550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452210\|ref\|XP_004143853.1\|	7.6e-15	77.42	PREDICTED: uncharacterized protein LOC101205349 [Cucumis sativus]	[more]
gi\|659074109\|ref\|XP_008437426.1\|	1.0e-14	77.42	PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo]	[more]
gi\|502139040\|ref\|XP_004503624.1\|	2.2e-06	58.46	PREDICTED: uncharacterized protein LOC101498634 isoform X2 [Cicer arietinum]	[more]
gi\|502139604\|ref\|XP_004503831.1\|	2.2e-06	58.46	PREDICTED: uncharacterized protein LOC101508778, partial [Cicer arietinum]	[more]
gi\|502139038\|ref\|XP_004503623.1\|	2.2e-06	58.46	PREDICTED: uncharacterized protein LOC101498634 isoform X1 [Cicer arietinum]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G001550.1	Lsi09G001550.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G001550	Csa5G148700	Cucumber (Chinese Long) v2	culsiB322
Lsi09G001550	CmaCh02G009290	Cucurbita maxima (Rimu)	cmalsiB535
Lsi09G001550	CmoCh02G009380	Cucurbita moschata (Rifu)	cmolsiB521
Lsi09G001550	ClCG01G001670	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G001550	Cla97C01G001700	Watermelon (97103) v2	lsiwmbB007
Lsi09G001550	Bhi12G000103	Wax gourd	lsiwgoB008
Lsi09G001550	Cp4.1LG05g07860	Cucurbita pepo (Zucchini)	cpelsiB578
Lsi09G001550	CsGy5G001710	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G001550	Carg21296	Silver-seed gourd	carlsiB327
Lsi09G001550	Carg08545	Silver-seed gourd	carlsiB646
Lsi09G001550	CsaV3_5G001830	Cucumber (Chinese Long) v3	cuclsiB345

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G001550	Cucumber (Gy14) v1	cgylsiB487
Lsi09G001550	Cucurbita maxima (Rimu)	cmalsiB267
Lsi09G001550	Cucurbita moschata (Rifu)	cmolsiB255
Lsi09G001550	Cucurbita pepo (Zucchini)	cpelsiB002
Lsi09G001550	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G001550	Melon (DHL92) v3.5.1	lsimeB012
Lsi09G001550	Watermelon (97103) v1	lsiwmB027
Lsi09G001550	Melon (DHL92) v3.6.1	lsimedB012