Lsi09G000450 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G000450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMyosin ID heavy chain
Locationchr09 : 399329 .. 401735 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAACGTCAATTTCTCGTTTAGAAGTCGAGGCTTCGAGGAAGATACCCTTTTTTTCTCGCCCAGTTCCAACTTTGAACGATAACAATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTTAAATTTGTACATATCGTGTTGAATTTCTTTTGCTTTTGTAATTCGCCTTCGTATCGATGTATATCGTTTCTGAAATTTGTAAATTGTGTTTGATTGATTCTACCTTGTTTACCCTTCTTTGTGAAATTGTATGTCGATGATAGTTTTCCATATCCAGAATTTCGAATCTGTTGCTTTCTTAATGGATAACAACTTTTCGTTCTCTTGTTCTTATTTTCTTTTATATGTATTTAAAGAAAAATCTTGGTGTACTTAATGATGATCTCTGGCTAATAAGGGGGAAATGCTTGCTTTAGCATGTTTGAAATTGTTGTCTATTTGGACACCGTGTATTCTGTAATTCCTAAGATTAATGTATTCTTTTGTATTGTGTAGTTTCCTTTTTGAATTTGTGAATAAATAGAAATTCTTTAAGCTGTGGCTATTAAGTATTTTGGATGAATGTTTAGTGGGGTGAAAATATGAGAGCTTTTGTTGGGTTGTATTCTGTTGGATTTTCTTTGTTGTATATAAACTCCATCTTTGATTAAATAAGGGCTCATTTGATTATAATTCTGTTTTTGGTTTTCTGCTTTTGGAAATTATGTTTATTTTCTCACTATTTTTTTTACGGTTTTGAAAACTTGGAATGGTTTTTGAAAACATTGCTAACAAAATAAAGAGACTTATAGATGGAAATGGTGTTTATAAGCTTGAGTTGTCGTTTTAAAGTTTCTTTCAACGACCCCTACTCTTTGTGTTGCGGCCATAGCAGCCATTTTGAATTGGTGCATCATTCATTTATGTCTTTTGCATTCTATCTCATACTCCATAACCAAGTTCTACCATGTTTTTTATCCCTGCAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTAATTGACATTGTCTTCTCTATTTATCGCTTCCATTTTGAACAGAATAAAACAGTTAATGAGATTTTGCTATTAATTTGAGCTTTGAACAAATGGTGATGAGAAGAGGCTGTGCATGAGATGAGAATGAGATTGTTTAGAATGTTGAACTTTGGGCATGATTGTAAAATTTTCCATTTCGCCTTCAACAAGGAGAGTTCTATTGATGGTTTTAGAGCTCATCATTCTCTGAACTGATTAAGTTACCATTTTAGATACCCATAATTGTTCTTTATTCACAAATCTTTTTCTTTCTTCTTGTTGAGTTTAGGGATATCTGTGCTTTTTCTAAATTTGTGGTACCCCTTTCTTTAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTATGAATACTCTGAGAGTAGTAATGTTACATTCTCTTTCGATAAAATTTTAAGTTCTTTGCTTTGTTCCATAATATACAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGATTTATGATTGGTCAGTTTCTGATGGAAGCAGCTTGATCGTCCTCTTCTTTTAGAAGATAAAGATTTGTTAGCCAGTATACAGTGCTTGGTCATTTTGCATCTGATCAAATTGAAAAGGTTGTATTCATATTTCTGAATGCAAAGTTTTAGAATGATTTTGTGGTTGTTTGTTTTGAAGTATTGATTATTGTATTTGTAATTGTACAAAACCAGACTCGTGATCTTTGGAATTTGAATTTGTAGATTCTTGCACTATTTGAATCTGTATAGGAATCAGAAATGCTTATGGAAATGGATTGAAAATTGTATTGAAATAAGAAAGGAAATTATAAATTACACGAACTACTAAATTATTATTATT

mRNA sequence

GTAACGTCAATTTCTCGTTTAGAAGTCGAGGCTTCGAGGAAGATACCCTTTTTTTCTCGCCCAGTTCCAACTTTGAACGATAACAATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGATTTATGATTGGTCAGTTTCTGATGGAAGCAGCTTGATCGTCCTCTTCTTTTAGAAGATAAAGATTTGTTAGCCAGTATACAGTGCTTGGTCATTTTGCATCTGATCAAATTGAAAAGGTTGTATTCATATTTCTGAATGCAAAGTTTTAGAATGATTTTGTGGTTGTTTGTTTTGAAGTATTGATTATTGTATTTGTAATTGTACAAAACCAGACTCGTGATCTTTGGAATTTGAATTTGTAGATTCTTGCACTATTTGAATCTGTATAGGAATCAGAAATGCTTATGGAAATGGATTGAAAATTGTATTGAAATAAGAAAGGAAATTATAAATTACACGAACTACTAAATTATTATTATT

Coding sequence (CDS)

ATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGA

Protein sequence

MDSRSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRKQE
Homology
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BLAST of Lsi09G000450 vs. Swiss-Prot
Match: MYSB_ACACA (Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 1 

Query: 54  GIKVRRKASLHRDYKGDYIDVPSNQFLMKILQKQG--EQNVLFADKVLKFTGSGKMKRRI 113
           G K R++ S++R Y+ DYI+  +N  L   ++  G  ++   F D+VL     GK +RR 
Sbjct: 713 GKKERQRHSVNRKYEFDYINYDANYPLQDCVRSSGRDKEATAFTDQVLVLNRRGKPERRD 772

Query: 114 LLITEFAIYIIDPETDT------LKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMAS 173
           L++T  A+Y    +  +      LKRRI L  +  + LS L DN + ++   +YD++  +
Sbjct: 773 LIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDN-YVVIHHNQYDMVFEN 832

Query: 174 TRKTEIVTVLVEAFKSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
            +KTEIVT+L+E +K S   +L V F++   Y A     + + F + E       ++K
Sbjct: 833 DKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQRRLTFSKNESASAQPSIKK 889

[Close]
BLAST of Lsi09G000450 vs. Swiss-Prot
Match: MYOB_DICDI (Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 55/169 (32.54%), Postives = 89/169 (52.66%), Query Frame = 1 

Query: 52  FMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILQK-QGEQNVLFADKVLKFTGSGKMKRR 111
           F   K R++ S+ R +  DYID  +   L + +Q    ++ V+FAD V+K     K K  
Sbjct: 725 FKDKKERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKNY 784

Query: 112 ILLITEFAIYIIDPE------TDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMA 171
            +++T+ A+Y ++          TL RR+ L  +  + +S LSDN     +P E+D ++ 
Sbjct: 785 EMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVIE 844

Query: 172 STRKTEIVTVLVEAFKSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVE 214
           + +KTEI+ VLVE FK+     L V FS+R  Y       KE+ F++ E
Sbjct: 845 NDKKTEIIIVLVEYFKAIGGGSLNVQFSDRINYTLKKGEQKEISFQKSE 892

[Close]
BLAST of Lsi09G000450 vs. Swiss-Prot
Match: MYOD_DICDI (Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-15
Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLIT 115
           K RR+ S+ R Y+GDYI+   N  L  I++K G + ++F   V K+    + +RR+LL++
Sbjct: 725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query: 116 EFAIYIIDPETD-------------TLKRRIALAAVDKICLSELSDNFFTIVIPTEYDIL 175
           + AIY I  E +               KRR+ LA +  + LS+LSD F  +    E+D +
Sbjct: 785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query: 176 MASTRKTEIVTVLVEAFKSSS 184
               RKTE +  L++A+K+ +
Sbjct: 845 FECRRKTEFLGTLIKAYKTGT 865

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BLAST of Lsi09G000450 vs. Swiss-Prot
Match: MYSC_ACACA (Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.3e-12
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFAD---KVLKFTGSGKMKRRIL 115
           K RR+ SL R +K DYI+   N  L   +  +G + VLFAD    + K     K++RRI+
Sbjct: 704 KERRRLSLERPFKTDYINYRQNFKLKDCIGDKGTEKVLFADLCNNLDKSFWGSKVERRIM 763

Query: 116 LITEFAIYI--IDPETD-----------TLKRRIALAAVDKICLSELSDNFFTIVIPTEY 175
           ++T  A+++  IDP  D            LKRRI    +  I LS L DNF  I +  E+
Sbjct: 764 VLTSNAMFLVAIDPNKDKIEKKVKPFLYVLKRRIDFNKIGSITLSPLQDNFMLISVNGEH 823

Query: 176 DILMASTRKTEIVTVLVE 178
             L+   RKTE++ VL++
Sbjct: 824 SNLLECRRKTELIGVLLK 841

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BLAST of Lsi09G000450 vs. Swiss-Prot
Match: MYOC_DICDI (Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-11
Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 1 

Query: 47  EDQEPFMGIKVRRKASLH--RDYKGDYIDVPSNQFLMKILQKQGEQNVLFADK----VLK 106
           ++++ F G K R + S+   R Y GDY+DV S  + +  + +   ++V+F+ K    V  
Sbjct: 763 QNEQLFQGRKERNRFSMISVRKYFGDYLDVRSQSYFLDAMAEGRNEDVIFSSKSQVMVHP 822

Query: 107 FTGSGKMKRRILLITEFAIYIIDPE------TDTLKRRIALAAVDKICLSELSDNFFTIV 166
              + K+  R L++T+ AIY+I  +      T  L RR+ LA V    LS L+DN   I 
Sbjct: 823 ILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIH 882

Query: 167 IPTEYDILMASTRKTEIVTVL 176
             T++D+ + +  KTE+V ++
Sbjct: 883 TSTQFDVAVTTEFKTELVALI 903

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BLAST of Lsi09G000450 vs. TrEMBL
Match: A0A0A0KNB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.6e-111
Identity = 209/225 (92.89%), Postives = 219/225 (97.33%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSP +GAVE+P +AG  +D++GLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQ+LMKILQKQGEQ+VLFADKVLKFT SGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGE+IKE+QFEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Lsi09G000450 vs. TrEMBL
Match: E0CUK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-83
Identity = 166/224 (74.11%), Postives = 186/224 (83.04%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPVA----GAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRR 63
           RS RRV I+D  P         E+P   G+      +K RPS+ NVTEDQEPFMG+KVRR
Sbjct: 16  RSHRRVQIEDSKPTRYDDDDDEEEPSSRGS------IKLRPSEKNVTEDQEPFMGVKVRR 75

Query: 64  KASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAI 123
           +ASLHRDYKGDY+DVPS  FLMK+L KQG++ VLFADK LKFTGSGKMKRR LLIT+FAI
Sbjct: 76  RASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDFAI 135

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YIID ETD LKRRI+LAAV+KICLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLV+A 
Sbjct: 136 YIIDSETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVDAT 195

Query: 184 KSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           K+ SDYELEVVFSNRF YNA  +L+KEVQFEEVEGGVKTRILRK
Sbjct: 196 KNMSDYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

[Close]
BLAST of Lsi09G000450 vs. TrEMBL
Match: A0A061G2J9_THECC (Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 9.1e-83
Identity = 162/220 (73.64%), Postives = 187/220 (85.00%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  D     E+  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  FLMKILQKQG++ VLFADKVLKFT SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +L+KEVQFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

[Close]
BLAST of Lsi09G000450 vs. TrEMBL
Match: A0A061G8R3_THECC (Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81
Identity = 162/221 (73.30%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  D     E+  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  FLMKILQKQG++ VLFADKVLKFT SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSN-RFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           +YELEVVFSN RF YNA  +L+KEVQFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNSRFEYNASADLVKEVQFEEVEGGVRTRIVRK 223

[Close]
BLAST of Lsi09G000450 vs. TrEMBL
Match: A0A059DJJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02670 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 158/212 (74.53%), Postives = 182/212 (85.85%), Query Frame = 1 

Query: 12  DDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASLHRDYKGDY 71
           DD SP +  ++  D  G  E    ++F+ S  NVTE+QEPFMG KVRRKASLHRDYKGDY
Sbjct: 25  DDDSPGSRGIDGDDGGGEGE--HSVRFKHSANNVTENQEPFMGFKVRRKASLHRDYKGDY 84

Query: 72  IDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIIDPETDTLKR 131
           +DV S+ FLMKILQKQG++ VLFADKVLKFTGSGKMKRRILLIT+FA+YI+DPETD LKR
Sbjct: 85  LDVLSHPFLMKILQKQGDKQVLFADKVLKFTGSGKMKRRILLITDFALYIVDPETDALKR 144

Query: 132 RIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSSDYELEVVF 191
           RIALAAV+K+CLSELSDNFF +++PTEYD+LMASTRKTEIVTVLVEA KS+SDYELEV F
Sbjct: 145 RIALAAVEKMCLSELSDNFFAVIVPTEYDLLMASTRKTEIVTVLVEATKSASDYELEVNF 204

Query: 192 SNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           SNRF YNA  EL+KE+QF EVEGGVKT+I RK
Sbjct: 205 SNRFEYNAAAELVKEIQFAEVEGGVKTKITRK 234

[Close]
BLAST of Lsi09G000450 vs. TAIR10
Match: AT5G53310.1 (AT5G53310.1 myosin heavy chain-related)

HSP 1 Score: 240.7 bits (613), Expect = 8.5e-64
Identity = 116/176 (65.91%), Postives = 148/176 (84.09%), Query Frame = 1 

Query: 48  DQEPFMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKM 107
           D  PF G KVRRKAS +R+++GDY+ V S   LM+IL+KQG+ ++LFADKVLKFTGSGKM
Sbjct: 35  DHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKM 94

Query: 108 KRRILLITEFAIYIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTR 167
           KRRI ++T+FAIY+IDPET+ + RRIAL++V+K+CLS+LSDNFF I+IPTEYD+ MASTR
Sbjct: 95  KRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTR 154

Query: 168 KTEIVTVLVEAFKSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           KTE+V V+V+  KS+SDYELEV+ SNRF YNA   L+KEV FEE EGG+KT+ + K
Sbjct: 155 KTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210

[Close]
BLAST of Lsi09G000450 vs. NCBI nr
Match: gi|659074376|ref|XP_008437570.1| (PREDICTED: myosin heavy chain IB [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112
Identity = 212/225 (94.22%), Postives = 219/225 (97.33%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSP +GAVE+PD+AG  +D+QGLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPNDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQFLMKILQKQGEQ+VLFADKVLKFT SGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGELIKE+ FEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Lsi09G000450 vs. NCBI nr
Match: gi|449456363|ref|XP_004145919.1| (PREDICTED: myosin IB heavy chain [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 5.1e-111
Identity = 209/225 (92.89%), Postives = 219/225 (97.33%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSP +GAVE+P +AG  +D++GLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQ+LMKILQKQGEQ+VLFADKVLKFT SGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGE+IKE+QFEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Lsi09G000450 vs. NCBI nr
Match: gi|1009122741|ref|XP_015878164.1| (PREDICTED: myosin IB heavy chain [Ziziphus jujuba])

HSP 1 Score: 318.5 bits (815), Expect = 9.1e-84
Identity = 163/224 (72.77%), Postives = 192/224 (85.71%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSP--VAGAVEQPDIAGTTEDL--QGLKFRPSDGNVTEDQEPFMGIKVRR 63
           ++ RRV IDD  P  V+ A    D+    ED    G++ RPS+GNVTEDQEPFMG+KVRR
Sbjct: 5   KATRRVQIDDPQPQPVSEAPRYDDVEDDREDEFDGGMRLRPSEGNVTEDQEPFMGVKVRR 64

Query: 64  KASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAI 123
           K SLHR+Y+GDYIDVPS+ FL+KILQKQG++ VLFADKVLKFT +GKMKRRILLIT+FA+
Sbjct: 65  KTSLHREYQGDYIDVPSHPFLLKILQKQGDKKVLFADKVLKFTSTGKMKRRILLITDFAM 124

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YI+DPE+DTLKRRIALAAV+K+CLSELSDNF  I+IPTEYD+L+ASTRKTEIVTVLVE  
Sbjct: 125 YIVDPESDTLKRRIALAAVEKMCLSELSDNFLAIIIPTEYDLLLASTRKTEIVTVLVETA 184

Query: 184 KSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           KS+S+YELEV FSNRF YNA  +L+KEVQFEEVEGGVKTRI+RK
Sbjct: 185 KSASEYELEVAFSNRFEYNAAADLVKEVQFEEVEGGVKTRIVRK 228

[Close]
BLAST of Lsi09G000450 vs. NCBI nr
Match: gi|225462707|ref|XP_002267282.1| (PREDICTED: myosin IB heavy chain [Vitis vinifera])

HSP 1 Score: 317.0 bits (811), Expect = 2.6e-83
Identity = 166/224 (74.11%), Postives = 186/224 (83.04%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPVA----GAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRR 63
           RS RRV I+D  P         E+P   G+      +K RPS+ NVTEDQEPFMG+KVRR
Sbjct: 16  RSHRRVQIEDSKPTRYDDDDDEEEPSSRGS------IKLRPSEKNVTEDQEPFMGVKVRR 75

Query: 64  KASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAI 123
           +ASLHRDYKGDY+DVPS  FLMK+L KQG++ VLFADK LKFTGSGKMKRR LLIT+FAI
Sbjct: 76  RASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDFAI 135

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YIID ETD LKRRI+LAAV+KICLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLV+A 
Sbjct: 136 YIIDSETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVDAT 195

Query: 184 KSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           K+ SDYELEVVFSNRF YNA  +L+KEVQFEEVEGGVKTRILRK
Sbjct: 196 KNMSDYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

[Close]
BLAST of Lsi09G000450 vs. NCBI nr
Match: gi|590673590|ref|XP_007038936.1| (Myosin heavy chain-related isoform 1 [Theobroma cacao])

HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82
Identity = 162/220 (73.64%), Postives = 187/220 (85.00%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  D     E+  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  FLMKILQKQG++ VLFADKVLKFT SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFVYNAGGELIKEVQFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +L+KEVQFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

The following BLAST results are available for this feature:
BLAST of Lsi09G000450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYSB_ACACA1.1e-1530.90Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2[more]
MYOB_DICDI2.4e-1532.54Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2[more]
MYOD_DICDI3.1e-1533.33Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2[more]
MYSC_ACACA9.3e-1236.23Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1[more]
MYOC_DICDI6.0e-1131.21Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2[more]
BLAST of Lsi09G000450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB2_CUCSA3.6e-11192.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1[more]
E0CUK7_VITVI1.8e-8374.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=... [more]
A0A061G2J9_THECC9.1e-8373.64Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
A0A061G8R3_THECC2.3e-8173.30Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
A0A059DJJ6_EUCGR2.9e-8174.53Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02670 PE=4 SV=1[more]
BLAST of Lsi09G000450 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53310.18.5e-6465.91 myosin heavy chain-related[more]
BLAST of Lsi09G000450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074376|ref|XP_008437570.1|1.6e-11294.22PREDICTED: myosin heavy chain IB [Cucumis melo][more]
gi|449456363|ref|XP_004145919.1|5.1e-11192.89PREDICTED: myosin IB heavy chain [Cucumis sativus][more]
gi|1009122741|ref|XP_015878164.1|9.1e-8472.77PREDICTED: myosin IB heavy chain [Ziziphus jujuba][more]
gi|225462707|ref|XP_002267282.1|2.6e-8374.11PREDICTED: myosin IB heavy chain [Vitis vinifera][more]
gi|590673590|ref|XP_007038936.1|1.3e-8273.64Myosin heavy chain-related isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
Vocabulary: INTERPRO
TermDefinition
IPR010926Myosin_TH1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0008152 metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0010200 response to chitin
cellular_component GO:0016459 myosin complex
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003774 motor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G000450.1Lsi09G000450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010926Class I myosin tail homology domainPFAMPF06017Myosin_TH1coord: 51..213
score: 1.8
IPR010926Class I myosin tail homology domainPROFILEPS51757TH1coord: 56..225
score: 24
NoneNo IPR availablePANTHERPTHR34969FAMILY NOT NAMEDcoord: 3..224
score: 5.5E
NoneNo IPR availablePANTHERPTHR34969:SF1SUBFAMILY NOT NAMEDcoord: 3..224
score: 5.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G000450Csa5G139650Cucumber (Chinese Long) v2culsiB322
Lsi09G000450CSPI05G03400Wild cucumber (PI 183967)cpilsiB322
Lsi09G000450Cucsa.201930Cucumber (Gy14) v1cgylsiB347
Lsi09G000450CmaCh15G010440Cucurbita maxima (Rimu)cmalsiB262
Lsi09G000450CmoCh15G011030Cucurbita moschata (Rifu)cmolsiB249
Lsi09G000450Cla004915Watermelon (97103) v1lsiwmB027
Lsi09G000450MELO3C005865Melon (DHL92) v3.5.1lsimeB012
Lsi09G000450ClCG01G000640Watermelon (Charleston Gray)lsiwcgB008
Lsi09G000450MELO3C005865.2Melon (DHL92) v3.6.1lsimedB012
Lsi09G000450Cla97C01G000700Watermelon (97103) v2lsiwmbB007
Lsi09G000450Bhi12G000535Wax gourdlsiwgoB024
Lsi09G000450Cp4.1LG13g03020Cucurbita pepo (Zucchini)cpelsiB134
Lsi09G000450CsGy5G000640Cucumber (Gy14) v2cgyblsiB294
Lsi09G000450Carg26222Silver-seed gourdcarlsiB276
Lsi09G000450CsaV3_5G000730Cucumber (Chinese Long) v3cuclsiB345
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G000450Melon (DHL92) v3.6.1lsimedB033
Lsi09G000450Melon (DHL92) v3.6.1lsimedB039
Lsi09G000450Silver-seed gourdcarlsiB457
Lsi09G000450Silver-seed gourdcarlsiB487
Lsi09G000450Silver-seed gourdcarlsiB902
Lsi09G000450Cucumber (Chinese Long) v3cuclsiB164
Lsi09G000450Cucumber (Chinese Long) v3cuclsiB268
Lsi09G000450Watermelon (97103) v2lsiwmbB019
Lsi09G000450Wax gourdlsiwgoB045
Lsi09G000450Bottle gourd (USVL1VR-Ls)lsilsiB010
Lsi09G000450Bottle gourd (USVL1VR-Ls)lsilsiB014
Lsi09G000450Cucumber (Gy14) v1cgylsiB413
Lsi09G000450Cucurbita maxima (Rimu)cmalsiB226
Lsi09G000450Cucurbita maxima (Rimu)cmalsiB298
Lsi09G000450Cucurbita maxima (Rimu)cmalsiB363
Lsi09G000450Cucurbita maxima (Rimu)cmalsiB536
Lsi09G000450Cucurbita moschata (Rifu)cmolsiB214
Lsi09G000450Cucurbita moschata (Rifu)cmolsiB286
Lsi09G000450Cucurbita moschata (Rifu)cmolsiB351
Lsi09G000450Cucurbita moschata (Rifu)cmolsiB520
Lsi09G000450Cucurbita pepo (Zucchini)cpelsiB019
Lsi09G000450Cucurbita pepo (Zucchini)cpelsiB163
Lsi09G000450Cucurbita pepo (Zucchini)cpelsiB486
Lsi09G000450Cucurbita pepo (Zucchini)cpelsiB579
Lsi09G000450Wild cucumber (PI 183967)cpilsiB150
Lsi09G000450Cucumber (Chinese Long) v2culsiB151
Lsi09G000450Melon (DHL92) v3.5.1lsimeB031
Lsi09G000450Melon (DHL92) v3.5.1lsimeB035
Lsi09G000450Watermelon (Charleston Gray)lsiwcgB018
Lsi09G000450Watermelon (Charleston Gray)lsiwcgB021
Lsi09G000450Watermelon (97103) v1lsiwmB018
Lsi09G000450Watermelon (97103) v1lsiwmB023
Lsi09G000450Cucumber (Gy14) v2cgyblsiB137