Cp4.1LG13g03020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g03020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionmyosin heavy chain-related
LocationCp4.1LG13 : 2521103 .. 2523853 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATATTCATATAAAAGGCTTCATTTCGACATAGCCCATAGACAGTGACTGCAATTTCTCGTTTTAGAAGTTGAGGGTTCGAGGGAGAATCCCCTTTTTTTCTCTCGCTGAGCCCCAACTTCGAACGATTTCAATGGACTCCAGATCCCGGAGGCGGGTCCACATCGACGATCGAGCTCCGTCAGCCGGAGCTGTGGAACCACAGGACATATCCGGAACCACCGACGATGTGCAAGGATTGAAATTGCGACCCTCCGATGGGAATGTGACCGAAGATCAGGAGCCATTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTCCATCGGGATTACAAGGGGGATTACATCGATGTGCCCTCGAACCAATTCTTGATGAAAATCTTGAAAAAACAAGGTTAGATTTGTACCTACCGCGTTGATATGCCATTATTTACGGTGTTTTTACTGTATTTTGTCTCTGAAATTGGTAATTATAGTTGATTGATTTGCCGTTGTTCATCCTTGTTTGTGAAATTGTATGTCGATGATAGTTTTCCATATCCAGCATTGCGAATCTATTACTTTCTTAGTGAACTTGAACCAGAGACCTCGCCCGTGAAGTAAATCATCGCATAATAAGGGGGAGATGTTGCTTTAGCATGTTTGAAATTGTTGTCTATTTGGACACCTTGTATTATGTAATTCCTCAGAGTATAATGCATTCCTCTGTATTGTTTAGTTTCCTTTCTGAATTTATGAAGAAATAGAATTCATTTAAGCTGGCTACTAAGCATTTTGTATGAGTGTTTAGTGCGGATGAAAATATGAGAGCTTTTGTTGGGTTGTATTTTGTTGGATTTACTTGGACTCTTTTGTTGACAATTTTGTTCTTGGTATTCTGTTTTTGGAAATTATGTTTATTTCCTCACAATTTCATTACTATTGTTTTAAGAGAGACATTTGAATTCTTAGCTTAATTTAAAAATAAAACGTAAGTTCTTAAAAACTATTTGTTTTAGTTTTTCAAAACTTGGAATGGATTTTGAAAACTTTGTTGTAAAGTAGATAACAAAGAAAATAAATCCATCGGAAACCAAAAACCAAATGTTTATCAAATAGGCGGTTAACATTTCTTCCAATGGCCCTTGCTCATGCCGAATATTATGGTTTATGTTGCTCCATAGCAGCCATTTTGAATTGGTGCATCATTCATACATGGGAAAATGAATTGGTGTGTCGTTTTGAATATTATGGTTTCTTCCAACGGCCCCTACTCTTGCATTCTATCTCATAATCCATAACCAATTCTACCATGCGCGTTATGCGTGCAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTTATGAAGTTCACTGCTACTGGGAAAATGAAAAGGCGGATTCTTTTAATAACGGAGTTCGCTATCTACATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCTTGGCTGCTGTAGATAAGATATGTTTAAGTGAATTAAGCGATAACTTTTTTGCATTTATAATTCCAACGGAATATGATGTACTGATGGCAAGTACTCGGAAAACAGAGATTGTAACAGTTTTGGTTGAAGCGTTCAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTAAATTACATTATCTTTTATATTTATAACTCCCATTTCGAACTGAATAAAACAGTTAATACGATTTTGCTATTAATTTGAGCATATTGCACGAATTGTGAAGAAAGGAGGTTGCATGAGAAGGAGATTGCCTAGAATGTTGAACTTTTGACATAATTCTAAAATTTTCCAGTTTGCCTTTGACGAGGAGAGTTCTATTGCTCAATTTAGAGAACATCGTTCTCTGAACTGATTTTGTTACCATTTTAGCTATCCATAATTTTTCTTTGTTCACAAGCTTTTCTTCTTGTTGAGTTGTGTTATTTGTGTGCTTTTTCTAAATGTGTGTTACCTTCTTTGTAGGTTTGGATACAATGCAGGTGGTGAACTGTTAAAAGAAGTTCATTTCGAGGAAGTCGAAGGTATGAATGGCGTTTCTTCGTGTAGAATAGTGTCCCGTAAATTATTTGATGTGCGTTATTCTCTTAATTTTTAAATTCAAAACTGAAGTTTGATTTGAAAAATGAAAACTAATTTGTTAAAATAAATTATTTTCGAAGTTTTTATAGAAATTTAGCAAGGAAAACTTACAGAAACACATGTTTCTCAAAAACTAGAAAAAAATTTGAAGGTGGAACTATTTCGATCATATTCTTAAGTTCTTTTATTTGTTCCTTAACATACAGGCGGTGTGAAAACAAGAATTTTAAGGAAGCAGGAGTGATTTATCATTGCTTTATTGGTCAGTTTCTGATAGAAGCAGATTGATCTTCCTCTTCTTTTAGAAGAAAAAGATTTGTCAGCCAGTTTAGTGCTTGGTGAAATTGAAAAGTTGTATTCATATGGCTTAATAATGCAAAGTTTTAGAATGATTTTGTGGTTGTTTTGAAGTGTATTGGTTATTGTAATTGTTCATTGTACAAAACTAGACTCGCGATCTTTGGAATTTGATTATGTAGATTCTTGAACTGTTTGAATATATATTGGAATGAAACATTGTTATGGAAATGGATTGAAAATTGTATTGATATAAGAAACAGGAAAGTTGCAGTACCCAAAGCTTTTACTTTCTGTTCGAGGACTAGTTCGAGCAAGCCTAGAATGAGCCCCTTGGATCGTTTGATGCAAATAAACTAACTTTT

mRNA sequence

TGATATTCATATAAAAGGCTTCATTTCGACATAGCCCATAGACAGTGACTGCAATTTCTCGTTTTAGAAGTTGAGGGTTCGAGGGAGAATCCCCTTTTTTTCTCTCGCTGAGCCCCAACTTCGAACGATTTCAATGGACTCCAGATCCCGGAGGCGGGTCCACATCGACGATCGAGCTCCGTCAGCCGGAGCTGTGGAACCACAGGACATATCCGGAACCACCGACGATGTGCAAGGATTGAAATTGCGACCCTCCGATGGGAATGTGACCGAAGATCAGGAGCCATTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTCCATCGGGATTACAAGGGGGATTACATCGATGTGCCCTCGAACCAATTCTTGATGAAAATCTTGAAAAAACAAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTTATGAAGTTCACTGCTACTGGGAAAATGAAAAGGCGGATTCTTTTAATAACGGAGTTCGCTATCTACATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCTTGGCTGCTGTAGATAAGATATGTTTAAGTGAATTAAGCGATAACTTTTTTGCATTTATAATTCCAACGGAATATGATGTACTGATGGCAAGTACTCGGAAAACAGAGATTGTAACAGTTTTGGTTGAAGCGTTCAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGGATACAATGCAGGTGGTGAACTGTTAAAAGAAGTTCATTTCGAGGAAGTCGAAGGCGGTGTGAAAACAAGAATTTTAAGGAAGCAGGAGTGATTTATCATTGCTTTATTGGTCAGTTTCTGATAGAAGCAGATTGATCTTCCTCTTCTTTTAGAAGAAAAAGATTTGTCAGCCAGTTTAGTGCTTGGTGAAATTGAAAAGTTGTATTCATATGGCTTAATAATGCAAAGTTTTAGAATGATTTTGTGGTTGTTTTGAAGTGTATTGGTTATTGTAATTGTTCATTGTACAAAACTAGACTCGCGATCTTTGGAATTTGATTATGTAGATTCTTGAACTGTTTGAATATATATTGGAATGAAACATTGTTATGGAAATGGATTGAAAATTGTATTGATATAAGAAACAGGAAAGTTGCAGTACCCAAAGCTTTTACTTTCTGTTCGAGGACTAGTTCGAGCAAGCCTAGAATGAGCCCCTTGGATCGTTTGATGCAAATAAACTAACTTTT

Coding sequence (CDS)

ATGGACTCCAGATCCCGGAGGCGGGTCCACATCGACGATCGAGCTCCGTCAGCCGGAGCTGTGGAACCACAGGACATATCCGGAACCACCGACGATGTGCAAGGATTGAAATTGCGACCCTCCGATGGGAATGTGACCGAAGATCAGGAGCCATTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTCCATCGGGATTACAAGGGGGATTACATCGATGTGCCCTCGAACCAATTCTTGATGAAAATCTTGAAAAAACAAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTTATGAAGTTCACTGCTACTGGGAAAATGAAAAGGCGGATTCTTTTAATAACGGAGTTCGCTATCTACATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCTTGGCTGCTGTAGATAAGATATGTTTAAGTGAATTAAGCGATAACTTTTTTGCATTTATAATTCCAACGGAATATGATGTACTGATGGCAAGTACTCGGAAAACAGAGATTGTAACAGTTTTGGTTGAAGCGTTCAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGGATACAATGCAGGTGGTGAACTGTTAAAAGAAGTTCATTTCGAGGAAGTCGAAGGCGGTGTGAAAACAAGAATTTTAAGGAAGCAGGAGTGA

Protein sequence

MDSRSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRKQE
Homology
[Close]
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match: MYOB_DICDI (Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 56/169 (33.14%), Postives = 90/169 (53.25%), Query Frame = 1 

Query: 52  FMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILKK-QGEQSVLFADKVMKFTATGKMKRR 111
           F   K R++ S+ R +  DYID  +   L + ++    ++ V+FAD V+K     K K  
Sbjct: 725 FKDKKERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKNY 784

Query: 112 ILLITEFAIYIVDPE------TDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMA 171
            +++T+ A+Y V+          TL RR+ L  +  + +S LSDN   F +P E+D ++ 
Sbjct: 785 EMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVIE 844

Query: 172 STRKTEIVTVLVEAFKSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVE 214
           + +KTEI+ VLVE FK+     L V FS+R  Y       KE+ F++ E
Sbjct: 845 NDKKTEIIIVLVEYFKAIGGGSLNVQFSDRINYTLKKGEQKEISFQKSE 892

[Close]
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match: MYOD_DICDI (Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLIT 115
           K RR+ S+ R Y+GDYI+   N  L  I+KK G + ++F   V K+    + +RR+LL++
Sbjct: 725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query: 116 EFAIYIVDPETD-------------TLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVL 175
           + AIY +  E +               KRR+ LA +  + LS+LSD F       E+D +
Sbjct: 785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query: 176 MASTRKTEIVTVLVEAFKSSSDYELEVVFSNRFG 197
               RKTE +  L++A+K+ +   L + ++N  G
Sbjct: 845 FECRRKTEFLGTLIKAYKTGT---LRINYNNSIG 875

[Close]
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match: MYSB_ACACA (Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 1 

Query: 54  GIKVRRKASLHRDYKGDYIDVPSNQFLMKILKKQG--EQSVLFADKVMKFTATGKMKRRI 113
           G K R++ S++R Y+ DYI+  +N  L   ++  G  +++  F D+V+     GK +RR 
Sbjct: 713 GKKERQRHSVNRKYEFDYINYDANYPLQDCVRSSGRDKEATAFTDQVLVLNRRGKPERRD 772

Query: 114 LLITEFAIYIVDPETDT------LKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMAS 173
           L++T  A+Y    +  +      LKRRI L  +  + LS L DN +  I   +YD++  +
Sbjct: 773 LIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDN-YVVIHHNQYDMVFEN 832

Query: 174 TRKTEIVTVLVEAFKSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
            +KTEIVT+L+E +K S   +L V F++   Y A     + + F + E       ++K
Sbjct: 833 DKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQRRLTFSKNESASAQPSIKK 889

[Close]
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match: MYSC_ACACA (Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFAD---KVMKFTATGKMKRRIL 115
           K RR+ SL R +K DYI+   N  L   +  +G + VLFAD    + K     K++RRI+
Sbjct: 704 KERRRLSLERPFKTDYINYRQNFKLKDCIGDKGTEKVLFADLCNNLDKSFWGSKVERRIM 763

Query: 116 LITEFAIYIV--DPETD-----------TLKRRIALAAVDKICLSELSDNFFAFIIPTEY 175
           ++T  A+++V  DP  D            LKRRI    +  I LS L DNF    +  E+
Sbjct: 764 VLTSNAMFLVAIDPNKDKIEKKVKPFLYVLKRRIDFNKIGSITLSPLQDNFMLISVNGEH 823

Query: 176 DVLMASTRKTEIVTVLVEAFKSSSDYELEVVFSNRFGYN-AGGELLKEVHFEEVEGG 216
             L+   RKTE++ VL++   S     + + F++ F     GG+        + +GG
Sbjct: 824 SNLLECRRKTELIGVLLKHNPS-----VRIQFADTFNVTLKGGKTCVVKFIRDPQGG 875

[Close]
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match: MYOC_DICDI (Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 43/141 (30.50%), Postives = 74/141 (52.48%), Query Frame = 1 

Query: 47  EDQEPFMGIKVRRKASLH--RDYKGDYIDVPSNQFLMKILKKQGEQSVLFADK----VMK 106
           ++++ F G K R + S+   R Y GDY+DV S  + +  + +   + V+F+ K    V  
Sbjct: 763 QNEQLFQGRKERNRFSMISVRKYFGDYLDVRSQSYFLDAMAEGRNEDVIFSSKSQVMVHP 822

Query: 107 FTATGKMKRRILLITEFAIYIVDPE------TDTLKRRIALAAVDKICLSELSDNFFAFI 166
             +  K+  R L++T+ AIY++  +      T  L RR+ LA V    LS L+DN     
Sbjct: 823 ILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIH 882

Query: 167 IPTEYDVLMASTRKTEIVTVL 176
             T++DV + +  KTE+V ++
Sbjct: 883 TSTQFDVAVTTEFKTELVALI 903

[Close]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match: A0A0A0KNB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 7.7e-106
Identity = 198/225 (88.00%), Postives = 214/225 (95.11%), Query Frame = 1 

Query: 1   MDSRSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRV IDDR+P++GAVE   ++G  DDV+GLK RPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQ+LMKIL+KQGEQSVLFADKV+KFTA+GKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFK 180
           I+DPETDTLKRRIALAAVDKICLSELSDNFF  +IPTEYD+LMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGE++KE+ FEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match: A0A061G2J9_THECC (Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 7.7e-82
Identity = 161/220 (73.18%), Postives = 189/220 (85.91%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        + QD     ++  G++LRPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVD 123
            R+YKGDY+DVPS  FLMKIL+KQG++ VLFADKV+KFT++GKMKRRIL+IT+FAIYIVD
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +L+KEV FEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

[Close]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match: E0CUK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-81
Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASL 63
           RS RRV I+D  P+    +  D          +KLRPS+ NVTEDQEPFMG+KVRR+ASL
Sbjct: 16  RSHRRVQIEDSKPTR--YDDDDDEEEPSSRGSIKLRPSEKNVTEDQEPFMGVKVRRRASL 75

Query: 64  HRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVD 123
           HRDYKGDY+DVPS  FLMK+L KQG++ VLFADK +KFT +GKMKRR LLIT+FAIYI+D
Sbjct: 76  HRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDFAIYIID 135

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSS 183
            ETD LKRRI+LAAV+KICLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLV+A K+ S
Sbjct: 136 SETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVDATKNMS 195

Query: 184 DYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           DYELEVVFSNRF YNA  +L+KEV FEEVEGGVKTRILRK
Sbjct: 196 DYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

[Close]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match: A0A067JED2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26013 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.6e-81
Identity = 164/224 (73.21%), Postives = 188/224 (83.93%), Query Frame = 1 

Query: 4   RSRRRVHIDD-RAPSAGAVEPQD-ISGTTD--DVQGLKLRPSDGNVTEDQEPFMGIKVRR 63
           +S RRV IDD + P  G ++ +  ++G  D  +   L+L+PS  NV++DQEPFMGIKVRR
Sbjct: 5   KSNRRVRIDDSQLPKHGDIDDESGLNGIDDKGEESRLRLKPSGSNVSDDQEPFMGIKVRR 64

Query: 64  KASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAI 123
           KASLHRD KGDY+DVPS   LMKIL+KQG+  VLFADKV+KFTA+GKMKRRILLIT+FAI
Sbjct: 65  KASLHRDAKGDYLDVPSRSHLMKILQKQGDNEVLFADKVLKFTASGKMKRRILLITDFAI 124

Query: 124 YIVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAF 183
           YIVDPETD LKRRIALAAV+ ICLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLVE  
Sbjct: 125 YIVDPETDALKRRIALAAVENICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVETM 184

Query: 184 KSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           K +S+YELEV+FSN F YNA  EL+KEV FEEVEGGVKTRILRK
Sbjct: 185 KRTSNYELEVLFSNSFEYNAAAELVKEVQFEEVEGGVKTRILRK 228

[Close]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match: A0A061G8R3_THECC (Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-80
Identity = 161/221 (72.85%), Postives = 189/221 (85.52%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        + QD     ++  G++LRPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVD 123
            R+YKGDY+DVPS  FLMKIL+KQG++ VLFADKV+KFT++GKMKRRIL+IT+FAIYIVD
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSN-RFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           +YELEVVFSN RF YNA  +L+KEV FEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNSRFEYNASADLVKEVQFEEVEGGVRTRIVRK 223

[Close]
BLAST of Cp4.1LG13g03020 vs. TAIR10
Match: AT5G53310.1 (AT5G53310.1 myosin heavy chain-related)

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-62
Identity = 114/176 (64.77%), Postives = 147/176 (83.52%), Query Frame = 1 

Query: 48  DQEPFMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKM 107
           D  PF G KVRRKAS +R+++GDY+ V S   LM+IL+KQG+ S+LFADKV+KFT +GKM
Sbjct: 35  DHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKM 94

Query: 108 KRRILLITEFAIYIVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTR 167
           KRRI ++T+FAIY++DPET+ + RRIAL++V+K+CLS+LSDNFFA IIPTEYD+ MASTR
Sbjct: 95  KRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTR 154

Query: 168 KTEIVTVLVEAFKSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           KTE+V V+V+  KS+SDYELEV+ SNRF YNA   L+KEV FEE EGG+KT+ + K
Sbjct: 155 KTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210

[Close]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match: gi|659074376|ref|XP_008437570.1| (PREDICTED: myosin heavy chain IB [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107
Identity = 202/225 (89.78%), Postives = 215/225 (95.56%), Query Frame = 1 

Query: 1   MDSRSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRV IDDR+P++GAVE  D++G  DDVQGLK RPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPNDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQFLMKIL+KQGEQSVLFADKV+KFTA+GKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFK 180
           I+DPETDTLKRRIALAAVDKICLSELSDNFF  +IPTEYD+LMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGEL+KE+ FEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match: gi|449456363|ref|XP_004145919.1| (PREDICTED: myosin IB heavy chain [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-105
Identity = 198/225 (88.00%), Postives = 214/225 (95.11%), Query Frame = 1 

Query: 1   MDSRSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRV IDDR+P++GAVE   ++G  DDV+GLK RPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQ+LMKIL+KQGEQSVLFADKV+KFTA+GKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFK 180
           I+DPETDTLKRRIALAAVDKICLSELSDNFF  +IPTEYD+LMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRF YNAGGE++KE+ FEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match: gi|1009122741|ref|XP_015878164.1| (PREDICTED: myosin IB heavy chain [Ziziphus jujuba])

HSP 1 Score: 315.5 bits (807), Expect = 7.7e-83
Identity = 162/224 (72.32%), Postives = 193/224 (86.16%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQ--DISGTTDDV--QGLKLRPSDGNVTEDQEPFMGIKVRR 63
           ++ RRV IDD  P   +  P+  D+    +D    G++LRPS+GNVTEDQEPFMG+KVRR
Sbjct: 5   KATRRVQIDDPQPQPVSEAPRYDDVEDDREDEFDGGMRLRPSEGNVTEDQEPFMGVKVRR 64

Query: 64  KASLHRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAI 123
           K SLHR+Y+GDYIDVPS+ FL+KIL+KQG++ VLFADKV+KFT+TGKMKRRILLIT+FA+
Sbjct: 65  KTSLHREYQGDYIDVPSHPFLLKILQKQGDKKVLFADKVLKFTSTGKMKRRILLITDFAM 124

Query: 124 YIVDPETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAF 183
           YIVDPE+DTLKRRIALAAV+K+CLSELSDNF A IIPTEYD+L+ASTRKTEIVTVLVE  
Sbjct: 125 YIVDPESDTLKRRIALAAVEKMCLSELSDNFLAIIIPTEYDLLLASTRKTEIVTVLVETA 184

Query: 184 KSSSDYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           KS+S+YELEV FSNRF YNA  +L+KEV FEEVEGGVKTRI+RK
Sbjct: 185 KSASEYELEVAFSNRFEYNAAADLVKEVQFEEVEGGVKTRIVRK 228

[Close]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match: gi|590673590|ref|XP_007038936.1| (Myosin heavy chain-related isoform 1 [Theobroma cacao])

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-81
Identity = 161/220 (73.18%), Postives = 189/220 (85.91%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        + QD     ++  G++LRPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPKYDDDVQDEEQQEEN--GIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVD 123
            R+YKGDY+DVPS  FLMKIL+KQG++ VLFADKV+KFT++GKMKRRIL+IT+FAIYIVD
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +L+KEV FEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

[Close]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match: gi|225462707|ref|XP_002267282.1| (PREDICTED: myosin IB heavy chain [Vitis vinifera])

HSP 1 Score: 310.1 bits (793), Expect = 3.2e-81
Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1 

Query: 4   RSRRRVHIDDRAPSAGAVEPQDISGTTDDVQGLKLRPSDGNVTEDQEPFMGIKVRRKASL 63
           RS RRV I+D  P+    +  D          +KLRPS+ NVTEDQEPFMG+KVRR+ASL
Sbjct: 16  RSHRRVQIEDSKPTR--YDDDDDEEEPSSRGSIKLRPSEKNVTEDQEPFMGVKVRRRASL 75

Query: 64  HRDYKGDYIDVPSNQFLMKILKKQGEQSVLFADKVMKFTATGKMKRRILLITEFAIYIVD 123
           HRDYKGDY+DVPS  FLMK+L KQG++ VLFADK +KFT +GKMKRR LLIT+FAIYI+D
Sbjct: 76  HRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDFAIYIID 135

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFAFIIPTEYDVLMASTRKTEIVTVLVEAFKSSS 183
            ETD LKRRI+LAAV+KICLSELSDNFFA IIPTEYD+LMASTRKTEIVTVLV+A K+ S
Sbjct: 136 SETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVDATKNMS 195

Query: 184 DYELEVVFSNRFGYNAGGELLKEVHFEEVEGGVKTRILRK 224
           DYELEVVFSNRF YNA  +L+KEV FEEVEGGVKTRILRK
Sbjct: 196 DYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g03020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYOB_DICDI4.8e-1633.14Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2[more]
MYOD_DICDI4.8e-1632.47Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2[more]
MYSB_ACACA1.4e-1530.90Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2[more]
MYSC_ACACA1.0e-1031.64Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1[more]
MYOC_DICDI2.3e-1030.50Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2[more]
BLAST of Cp4.1LG13g03020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB2_CUCSA7.7e-10688.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1[more]
A0A061G2J9_THECC7.7e-8273.18Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
E0CUK7_VITVI2.3e-8173.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=... [more]
A0A067JED2_JATCU6.6e-8173.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26013 PE=4 SV=1[more]
A0A061G8R3_THECC1.9e-8072.85Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
BLAST of Cp4.1LG13g03020 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53310.12.7e-6264.77 myosin heavy chain-related[more]
BLAST of Cp4.1LG13g03020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074376|ref|XP_008437570.1|1.2e-10789.78PREDICTED: myosin heavy chain IB [Cucumis melo][more]
gi|449456363|ref|XP_004145919.1|1.1e-10588.00PREDICTED: myosin IB heavy chain [Cucumis sativus][more]
gi|1009122741|ref|XP_015878164.1|7.7e-8372.32PREDICTED: myosin IB heavy chain [Ziziphus jujuba][more]
gi|590673590|ref|XP_007038936.1|1.1e-8173.18Myosin heavy chain-related isoform 1 [Theobroma cacao][more]
gi|225462707|ref|XP_002267282.1|3.2e-8173.18PREDICTED: myosin IB heavy chain [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
Vocabulary: INTERPRO
TermDefinition
IPR010926Myosin_TH1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0008152 metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0010200 response to chitin
biological_process GO:0008150 biological_process
cellular_component GO:0016459 myosin complex
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003774 motor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g03020.1Cp4.1LG13g03020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010926Class I myosin tail homology domainPFAMPF06017Myosin_TH1coord: 51..213
score: 1.7
IPR010926Class I myosin tail homology domainPROFILEPS51757TH1coord: 56..225
score: 24
NoneNo IPR availablePANTHERPTHR34969FAMILY NOT NAMEDcoord: 37..224
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g03020Cucsa.201930Cucumber (Gy14) v1cgycpeB0571
Cp4.1LG13g03020CmaCh02G010950Cucurbita maxima (Rimu)cmacpeB602
Cp4.1LG13g03020CmoCh15G011030Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g03020CmoCh02G011210Cucurbita moschata (Rifu)cmocpeB551
Cp4.1LG13g03020Cla004915Watermelon (97103) v1cpewmB187
Cp4.1LG13g03020Csa5G139650Cucumber (Chinese Long) v2cpecuB188
Cp4.1LG13g03020MELO3C005865Melon (DHL92) v3.5.1cpemeB148
Cp4.1LG13g03020ClCG01G000640Watermelon (Charleston Gray)cpewcgB167
Cp4.1LG13g03020CSPI05G03400Wild cucumber (PI 183967)cpecpiB189
Cp4.1LG13g03020Lsi09G000450Bottle gourd (USVL1VR-Ls)cpelsiB134
Cp4.1LG13g03020MELO3C005865.2Melon (DHL92) v3.6.1cpemedB175
Cp4.1LG13g03020CsaV3_5G000730Cucumber (Chinese Long) v3cpecucB0226
Cp4.1LG13g03020Bhi12G000535Wax gourdcpewgoB0221
Cp4.1LG13g03020CsGy5G000640Cucumber (Gy14) v2cgybcpeB610
Cp4.1LG13g03020Carg14037Silver-seed gourdcarcpeB0713
Cp4.1LG13g03020Carg26222Silver-seed gourdcarcpeB0417
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g03020Cp4.1LG05g06180Cucurbita pepo (Zucchini)cpecpeB227
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g03020Silver-seed gourdcarcpeB0760
Cp4.1LG13g03020Silver-seed gourdcarcpeB1375
Cp4.1LG13g03020Cucurbita pepo (Zucchini)cpecpeB021
Cp4.1LG13g03020Cucurbita pepo (Zucchini)cpecpeB197
Cp4.1LG13g03020Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g03020Cucurbita maxima (Rimu)cmacpeB343
Cp4.1LG13g03020Cucurbita maxima (Rimu)cmacpeB423
Cp4.1LG13g03020Cucurbita moschata (Rifu)cmocpeB306
Cp4.1LG13g03020Cucurbita moschata (Rifu)cmocpeB384
Cp4.1LG13g03020Watermelon (Charleston Gray)cpewcgB173
Cp4.1LG13g03020Watermelon (97103) v1cpewmB179