CSPI05G03400 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G03400
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptionmyosin heavy chain-related
LocationChr5 : 3643685 .. 3646044 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAATGTTGATATTGACAAAAATGGGTTCATTTCAGCGTAGGGGCAGTGACGGCAATTTCTCGTTTAGAAGTCGAGGGGGGTTCGAGAGAGGGACTCCTTCTTTCTCGCTTAGTCCCATCTTCGACGATAACGATGGACTCCAGATCCCGGAGGCGGGTTCTTATTGACGACCGATCCCCGGCTTCCGGAGCTGTGGAACGACCGGTCGTCGCCGGACCCGACGACGATGTGCGAGGATTGAAATTCCGACCCTCCGATGGGAATGTGACTGAAGATCAAGAGCCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCTTCCAATCAGTACTTGATGAAAATCCTGCAAAAACAAGGTTGGATTTGTACCGACAGCGTTGAATTTCTTTTGCTTTTGTAATTGACCTCCGTGTTTATTTCGTTTCTGGCATTTTTGAAGTATGGTTGATTGATTCTAATTTATTCAACATTCTTTGTGAATTCGTTTGTATGTTGATGAATAGTTTTTCATTTCTAGAATTGCGAATCTATTACTTTCTTATTGGATGATAACTCTTCGTTCTCTTGTTCCTTAGATTGATGTATTGTTTTGTATTGGATGGTTTCCTTTTTTAATTTCAGAATAAATAGAATTCATTTAAGCTTTGGCTTTTAAGTATTTTGGATGTGTGTTTAGTGGGGTGAAATATGAGAGCTTTTCTTGGATTGGATTTACTTTGTTGTATACAAACTCCATATTTGATCAAATAAGGGTTCGTTTGATTACAATTTTGTTTCTTTCTCTTCTGCTTTTGGAAATCATGTTTATTTAACTTTTTGTAGCTTTTAAAAACTTCGAATGGATTTTGAAAACAATGTTATAAAGTAGTTTAACAAAACAAATAAACTCATAGATGGAAATGGTGTTTATGAACTAACTTTTGAAAACTAAAAACCAAATAGTTCTCAAACAAGCTTTAACGTTTCTTTCAATGGCCCTTATTCTTGGATAATAACATGATTTGTGTTGTGACCGACTAGCAGGCATTTCGCATTGGTGCATAACCAAGTTCTACTATGTTCTTTATGATCCCTGCAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTCTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTCGCCATCTATATCATTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGCGAACTAAGTGATAACTTCTTTACAATTGTGATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTTACAGTTTTGGTTGAAGCCTTTAAGAGTTCATCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTAATTCTCATTATCTTCTCTATCTCCCTCTCCCATTTTGAACTGAATCACCATTTGAGCTTTGAACAGATGGTGATGAAAAGAGGGTGCATGAAAATGACTGAATGAGATCGGTTGTAGAATGTTAAAATTTTCCGCATAATCGTAAAATTGTTCATTTCATCTTTAACAAGGAGAGCTCTATTTCTGGTTTTAAAGCTCTATTTCTGGTTCTAGAGTTCATCATTCACTGAACTGATTGAGTTAGCAGTTTAGATACCCATGATTGTTCTTTATTCACAAATCTTTTTCTTTCTTCTTGTTGAGTTATAATGTGCTGTTTTATGGCAGAGGGATATTTGTGCCTTTTCTAAACTTGTGGTACCTCTTTCTTTAGGTTTGCATACAATGCCGGAGGTGAAGTGATAAAAGAAATTCAGTTTGAGGAAGTCGAAGGTATGAATAATCTCCGTTTGAGTATGAATGTAACGTTCTCTTTCAATCGGATTCTTAAGTTTCTTGCTTTGTTTCATAATATACAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGAATTATGATTGTTTTATTGGTCAGTTTCTGATGGAAGCAGTTCGGATATTTCTTTTCTTTTAGAAGTTAAAGATTTGCTAGTGAGTATTCTGCTTGGTCATTTTGCATCTGATCAAATTGAAAAGTTGTGTCCCTATATCTAAATGCAAAGTTTTAGAATATATTTGTAGTTGTCCTTAAGTATTGATTATTGTATTTGTTCATTGTACAAAACTAGACTCATGATCTTTGGATTCTGAATTTGTAGATTCTTGAACTGTTTGAATCTGTATATGAATCAGAAATCATTATGAAAATTGATTGAACGTTGTATTGAAATAAGGCCACATTCACAATTCAATAATGAAATATCATTGATTGAT

mRNA sequence

ATGGACTCCAGATCCCGGAGGCGGGTTCTTATTGACGACCGATCCCCGGCTTCCGGAGCTGTGGAACGACCGGTCGTCGCCGGACCCGACGACGATGTGCGAGGATTGAAATTCCGACCCTCCGATGGGAATGTGACTGAAGATCAAGAGCCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCTTCCAATCAGTACTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTCTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTCGCCATCTATATCATTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGCGAACTAAGTGATAACTTCTTTACAATTGTGATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTTACAGTTTTGGTTGAAGCCTTTAAGAGTTCATCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGCATACAATGCCGGAGGTGAAGTGATAAAAGAAATTCAGTTTGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGA

Coding sequence (CDS)

ATGGACTCCAGATCCCGGAGGCGGGTTCTTATTGACGACCGATCCCCGGCTTCCGGAGCTGTGGAACGACCGGTCGTCGCCGGACCCGACGACGATGTGCGAGGATTGAAATTCCGACCCTCCGATGGGAATGTGACTGAAGATCAAGAGCCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCTTCCAATCAGTACTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAGTGTGCTTTTTGCAGATAAAGTCTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTCGCCATCTATATCATTGACCCAGAAACTGATACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGCGAACTAAGTGATAACTTCTTTACAATTGTGATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTTACAGTTTTGGTTGAAGCCTTTAAGAGTTCATCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGCATACAATGCCGGAGGTGAAGTGATAAAAGAAATTCAGTTTGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTTGAGGAAGCAGGAGTGA
Homology
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BLAST of CSPI05G03400 vs. Swiss-Prot
Match: MYSB_ACACA (Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16
Identity = 55/178 (30.90%), Postives = 95/178 (53.37%), Query Frame = 1 

Query: 54  GIKVRRKASLHRDYKGDYIDVPSNQYLMKILQKQG--EQSVLFADKVLKFTASGKMKRRI 113
           G K R++ S++R Y+ DYI+  +N  L   ++  G  +++  F D+VL     GK +RR 
Sbjct: 713 GKKERQRHSVNRKYEFDYINYDANYPLQDCVRSSGRDKEATAFTDQVLVLNRRGKPERRD 772

Query: 114 LLITEFAIYIIDPETDT------LKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMAS 173
           L++T  A+Y    +  +      LKRRI L  +  + LS L DN + ++   +YD++  +
Sbjct: 773 LIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDN-YVVIHHNQYDMVFEN 832

Query: 174 TRKTEIVTVLVEAFKSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
            +KTEIVT+L+E +K S   +L V F++   Y A     + + F + E       ++K
Sbjct: 833 DKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQRRLTFSKNESASAQPSIKK 889

[Close]
BLAST of CSPI05G03400 vs. Swiss-Prot
Match: MYOB_DICDI (Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = 1 

Query: 52  FMGIKVRRKASLHRDYKGDYIDVPSNQYLMKILQK-QGEQSVLFADKVLKFTASGKMKRR 111
           F   K R++ S+ R +  DYID  +   L + +Q    ++ V+FAD V+K     K K  
Sbjct: 725 FKDKKERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKNY 784

Query: 112 ILLITEFAIYIIDPE------TDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMA 171
            +++T+ A+Y ++          TL RR+ L  +  + +S LSDN     +P E+D ++ 
Sbjct: 785 EMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVIE 844

Query: 172 STRKTEIVTVLVEAFKSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVE 214
           + +KTEI+ VLVE FK+     L V FS+R  Y       KEI F++ E
Sbjct: 845 NDKKTEIIIVLVEYFKAIGGGSLNVQFSDRINYTLKKGEQKEISFQKSE 892

[Close]
BLAST of CSPI05G03400 vs. Swiss-Prot
Match: MYOD_DICDI (Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-15
Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLIT 115
           K RR+ S+ R Y+GDYI+   N  L  I++K G + ++F   V K+    + +RR+LL++
Sbjct: 725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query: 116 EFAIYIIDPETD-------------TLKRRIALAAVDKICLSELSDNFFTIVIPTEYDIL 175
           + AIY I  E +               KRR+ LA +  + LS+LSD F  +    E+D +
Sbjct: 785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query: 176 MASTRKTEIVTVLVEAFKSSS 184
               RKTE +  L++A+K+ +
Sbjct: 845 FECRRKTEFLGTLIKAYKTGT 865

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BLAST of CSPI05G03400 vs. Swiss-Prot
Match: MYSC_ACACA (Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 1 

Query: 56  KVRRKASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTAS---GKMKRRIL 115
           K RR+ SL R +K DYI+   N  L   +  +G + VLFAD       S    K++RRI+
Sbjct: 704 KERRRLSLERPFKTDYINYRQNFKLKDCIGDKGTEKVLFADLCNNLDKSFWGSKVERRIM 763

Query: 116 LITEFAIYI--IDPETD-----------TLKRRIALAAVDKICLSELSDNFFTIVIPTEY 175
           ++T  A+++  IDP  D            LKRRI    +  I LS L DNF  I +  E+
Sbjct: 764 VLTSNAMFLVAIDPNKDKIEKKVKPFLYVLKRRIDFNKIGSITLSPLQDNFMLISVNGEH 823

Query: 176 DILMASTRKTEIVTVLVE 178
             L+   RKTE++ VL++
Sbjct: 824 SNLLECRRKTELIGVLLK 841

[Close]
BLAST of CSPI05G03400 vs. Swiss-Prot
Match: MYOC_DICDI (Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 1 

Query: 47  EDQEPFMGIKVRRKASLH--RDYKGDYIDVPSNQYLMKILQKQGEQSVLFADK----VLK 106
           ++++ F G K R + S+   R Y GDY+DV S  Y +  + +   + V+F+ K    V  
Sbjct: 763 QNEQLFQGRKERNRFSMISVRKYFGDYLDVRSQSYFLDAMAEGRNEDVIFSSKSQVMVHP 822

Query: 107 FTASGKMKRRILLITEFAIYIIDPE------TDTLKRRIALAAVDKICLSELSDNFFTIV 166
             ++ K+  R L++T+ AIY+I  +      T  L RR+ LA V    LS L+DN   I 
Sbjct: 823 ILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIH 882

Query: 167 IPTEYDILMASTRKTEIVTVL 176
             T++D+ + +  KTE+V ++
Sbjct: 883 TSTQFDVAVTTEFKTELVALI 903

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BLAST of CSPI05G03400 vs. TrEMBL
Match: A0A0A0KNB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 3.9e-118
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of CSPI05G03400 vs. TrEMBL
Match: A0A061G2J9_THECC (Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.6e-82
Identity = 158/220 (71.82%), Postives = 187/220 (85.00%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  V      +  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPK--YDDDVQDEEQQEENGIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  +LMKILQKQG++ VLFADKVLKFT+SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +++KE+QFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

[Close]
BLAST of CSPI05G03400 vs. TrEMBL
Match: E0CUK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.0e-81
Identity = 162/224 (72.32%), Postives = 183/224 (81.70%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPA----SGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRR 63
           RS RRV I+D  P         E P   G       +K RPS+ NVTEDQEPFMG+KVRR
Sbjct: 16  RSHRRVQIEDSKPTRYDDDDDEEEPSSRG------SIKLRPSEKNVTEDQEPFMGVKVRR 75

Query: 64  KASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAI 123
           +ASLHRDYKGDY+DVPS  +LMK+L KQG++ VLFADK LKFT SGKMKRR LLIT+FAI
Sbjct: 76  RASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDFAI 135

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YIID ETD LKRRI+LAAV+KICLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLV+A 
Sbjct: 136 YIIDSETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVDAT 195

Query: 184 KSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           K+ SDYELEVVFSNRF YNA  +++KE+QFEEVEGGVKTRILRK
Sbjct: 196 KNMSDYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

[Close]
BLAST of CSPI05G03400 vs. TrEMBL
Match: A0A067JED2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26013 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.0e-81
Identity = 164/224 (73.21%), Postives = 187/224 (83.48%), Query Frame = 1 

Query: 4   RSRRRVLIDDRS-PASGAVE-RPVVAGPDD--DVRGLKFRPSDGNVTEDQEPFMGIKVRR 63
           +S RRV IDD   P  G ++    + G DD  +   L+ +PS  NV++DQEPFMGIKVRR
Sbjct: 5   KSNRRVRIDDSQLPKHGDIDDESGLNGIDDKGEESRLRLKPSGSNVSDDQEPFMGIKVRR 64

Query: 64  KASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAI 123
           KASLHRD KGDY+DVPS  +LMKILQKQG+  VLFADKVLKFTASGKMKRRILLIT+FAI
Sbjct: 65  KASLHRDAKGDYLDVPSRSHLMKILQKQGDNEVLFADKVLKFTASGKMKRRILLITDFAI 124

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YI+DPETD LKRRIALAAV+ ICLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVE  
Sbjct: 125 YIVDPETDALKRRIALAAVENICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVETM 184

Query: 184 KSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           K +S+YELEV+FSN F YNA  E++KE+QFEEVEGGVKTRILRK
Sbjct: 185 KRTSNYELEVLFSNSFEYNAAAELVKEVQFEEVEGGVKTRILRK 228

[Close]
BLAST of CSPI05G03400 vs. TrEMBL
Match: A0A061G8R3_THECC (Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 158/221 (71.49%), Postives = 187/221 (84.62%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  V      +  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPK--YDDDVQDEEQQEENGIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  +LMKILQKQG++ VLFADKVLKFT+SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSN-RFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           +YELEVVFSN RF YNA  +++KE+QFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNSRFEYNASADLVKEVQFEEVEGGVRTRIVRK 223

[Close]
BLAST of CSPI05G03400 vs. TAIR10
Match: AT5G53310.1 (AT5G53310.1 myosin heavy chain-related)

HSP 1 Score: 238.0 bits (606), Expect = 5.5e-63
Identity = 114/176 (64.77%), Postives = 147/176 (83.52%), Query Frame = 1 

Query: 48  DQEPFMGIKVRRKASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKM 107
           D  PF G KVRRKAS +R+++GDY+ V S   LM+IL+KQG+ S+LFADKVLKFT SGKM
Sbjct: 35  DHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKM 94

Query: 108 KRRILLITEFAIYIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTR 167
           KRRI ++T+FAIY+IDPET+ + RRIAL++V+K+CLS+LSDNFF I+IPTEYD+ MASTR
Sbjct: 95  KRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTR 154

Query: 168 KTEIVTVLVEAFKSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           KTE+V V+V+  KS+SDYELEV+ SNRF YNA   ++KE+ FEE EGG+KT+ + K
Sbjct: 155 KTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210

[Close]
BLAST of CSPI05G03400 vs. NCBI nr
Match: gi|449456363|ref|XP_004145919.1| (PREDICTED: myosin IB heavy chain [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 5.7e-118
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]
BLAST of CSPI05G03400 vs. NCBI nr
Match: gi|659074376|ref|XP_008437570.1| (PREDICTED: myosin heavy chain IB [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.7e-114
Identity = 219/225 (97.33%), Postives = 223/225 (99.11%), Query Frame = 1 

Query: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60
           MDSRSRRRVLIDDRSPASGAVERP VAGP+DDV+GLKFRPSDGNVTEDQEPFMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPNDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120
           ASLHRDYKGDYIDVPSNQ+LMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180
           IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 226
           SSSDYELEVVFSNRFAYNAGGE+IKEI FEEVEGGVKTRILRKQE
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]
BLAST of CSPI05G03400 vs. NCBI nr
Match: gi|590673590|ref|XP_007038936.1| (Myosin heavy chain-related isoform 1 [Theobroma cacao])

HSP 1 Score: 312.4 bits (799), Expect = 6.5e-82
Identity = 158/220 (71.82%), Postives = 187/220 (85.00%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRKASL 63
           +++RRV ID+        +  V      +  G++ RPSD NVTEDQEPFMG K RRKASL
Sbjct: 5   KAQRRVQIDESETPK--YDDDVQDEEQQEENGIRLRPSDSNVTEDQEPFMGFKARRKASL 64

Query: 64  HRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIYIID 123
            R+YKGDY+DVPS  +LMKILQKQG++ VLFADKVLKFT+SGKMKRRIL+IT+FAIYI+D
Sbjct: 65  RREYKGDYLDVPSRPFLMKILQKQGDKQVLFADKVLKFTSSGKMKRRILMITDFAIYIVD 124

Query: 124 PETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSS 183
           P+TD LKRRIALAAVDK+CLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVEA KS+S
Sbjct: 125 PDTDALKRRIALAAVDKMCLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVEATKSAS 184

Query: 184 DYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           +YELEVVFSNRF YNA  +++KE+QFEEVEGGV+TRI+RK
Sbjct: 185 EYELEVVFSNRFEYNASADLVKEVQFEEVEGGVRTRIVRK 222

[Close]
BLAST of CSPI05G03400 vs. NCBI nr
Match: gi|1009122741|ref|XP_015878164.1| (PREDICTED: myosin IB heavy chain [Ziziphus jujuba])

HSP 1 Score: 312.0 bits (798), Expect = 8.5e-82
Identity = 159/225 (70.67%), Postives = 192/225 (85.33%), Query Frame = 1 

Query: 4   RSRRRVLIDDRSPASGAVERPVVAGPDDDVR-----GLKFRPSDGNVTEDQEPFMGIKVR 63
           ++ RRV IDD  P   + E P     +DD       G++ RPS+GNVTEDQEPFMG+KVR
Sbjct: 5   KATRRVQIDDPQPQPVS-EAPRYDDVEDDREDEFDGGMRLRPSEGNVTEDQEPFMGVKVR 64

Query: 64  RKASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFA 123
           RK SLHR+Y+GDYIDVPS+ +L+KILQKQG++ VLFADKVLKFT++GKMKRRILLIT+FA
Sbjct: 65  RKTSLHREYQGDYIDVPSHPFLLKILQKQGDKKVLFADKVLKFTSTGKMKRRILLITDFA 124

Query: 124 IYIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEA 183
           +YI+DPE+DTLKRRIALAAV+K+CLSELSDNF  I+IPTEYD+L+ASTRKTEIVTVLVE 
Sbjct: 125 MYIVDPESDTLKRRIALAAVEKMCLSELSDNFLAIIIPTEYDLLLASTRKTEIVTVLVET 184

Query: 184 FKSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
            KS+S+YELEV FSNRF YNA  +++KE+QFEEVEGGVKTRI+RK
Sbjct: 185 AKSASEYELEVAFSNRFEYNAAADLVKEVQFEEVEGGVKTRIVRK 228

[Close]
BLAST of CSPI05G03400 vs. NCBI nr
Match: gi|802767791|ref|XP_012090128.1| (PREDICTED: myosin IB heavy chain [Jatropha curcas])

HSP 1 Score: 309.7 bits (792), Expect = 4.2e-81
Identity = 164/224 (73.21%), Postives = 187/224 (83.48%), Query Frame = 1 

Query: 4   RSRRRVLIDDRS-PASGAVE-RPVVAGPDD--DVRGLKFRPSDGNVTEDQEPFMGIKVRR 63
           +S RRV IDD   P  G ++    + G DD  +   L+ +PS  NV++DQEPFMGIKVRR
Sbjct: 5   KSNRRVRIDDSQLPKHGDIDDESGLNGIDDKGEESRLRLKPSGSNVSDDQEPFMGIKVRR 64

Query: 64  KASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAI 123
           KASLHRD KGDY+DVPS  +LMKILQKQG+  VLFADKVLKFTASGKMKRRILLIT+FAI
Sbjct: 65  KASLHRDAKGDYLDVPSRSHLMKILQKQGDNEVLFADKVLKFTASGKMKRRILLITDFAI 124

Query: 124 YIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAF 183
           YI+DPETD LKRRIALAAV+ ICLSELSDNFF I+IPTEYD+LMASTRKTEIVTVLVE  
Sbjct: 125 YIVDPETDALKRRIALAAVENICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVETM 184

Query: 184 KSSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRK 224
           K +S+YELEV+FSN F YNA  E++KE+QFEEVEGGVKTRILRK
Sbjct: 185 KRTSNYELEVLFSNSFEYNAAAELVKEVQFEEVEGGVKTRILRK 228

The following BLAST results are available for this feature:
BLAST of CSPI05G03400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYSB_ACACA2.1e-1630.90Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2[more]
MYOB_DICDI1.8e-1533.14Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2[more]
MYOD_DICDI4.0e-1533.33Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2[more]
MYSC_ACACA1.6e-1136.23Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1[more]
MYOC_DICDI4.6e-1131.91Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=3 SV=2[more]
BLAST of CSPI05G03400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB2_CUCSA3.9e-118100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139650 PE=4 SV=1[more]
A0A061G2J9_THECC4.6e-8271.82Myosin heavy chain-related isoform 1 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
E0CUK7_VITVI3.0e-8172.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02420 PE=4 SV=... [more]
A0A067JED2_JATCU3.0e-8173.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26013 PE=4 SV=1[more]
A0A061G8R3_THECC1.1e-8071.49Myosin heavy chain-related isoform 3 OS=Theobroma cacao GN=TCM_015332 PE=4 SV=1[more]
BLAST of CSPI05G03400 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53310.15.5e-6364.77 myosin heavy chain-related[more]
BLAST of CSPI05G03400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456363|ref|XP_004145919.1|5.7e-118100.00PREDICTED: myosin IB heavy chain [Cucumis sativus][more]
gi|659074376|ref|XP_008437570.1|1.7e-11497.33PREDICTED: myosin heavy chain IB [Cucumis melo][more]
gi|590673590|ref|XP_007038936.1|6.5e-8271.82Myosin heavy chain-related isoform 1 [Theobroma cacao][more]
gi|1009122741|ref|XP_015878164.1|8.5e-8270.67PREDICTED: myosin IB heavy chain [Ziziphus jujuba][more]
gi|802767791|ref|XP_012090128.1|4.2e-8173.21PREDICTED: myosin IB heavy chain [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010926Myosin_TH1
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0008152 metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0010200 response to chitin
biological_process GO:0008150 biological_process
cellular_component GO:0016459 myosin complex
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003774 motor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G03400.1CSPI05G03400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010926Class I myosin tail homology domainPFAMPF06017Myosin_TH1coord: 51..213
score: 5.2
IPR010926Class I myosin tail homology domainPROFILEPS51757TH1coord: 56..225
score: 25
NoneNo IPR availablePANTHERPTHR34969FAMILY NOT NAMEDcoord: 3..224
score: 2.4
NoneNo IPR availablePANTHERPTHR34969:SF1SUBFAMILY NOT NAMEDcoord: 3..224
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G03400Cla004915Watermelon (97103) v1cpiwmB416
CSPI05G03400Csa5G139650Cucumber (Chinese Long) v2cpicuB240
CSPI05G03400MELO3C005865Melon (DHL92) v3.5.1cpimeB348
CSPI05G03400ClCG01G000640Watermelon (Charleston Gray)cpiwcgB379
CSPI05G03400Lsi09G000450Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G03400MELO3C005865.2Melon (DHL92) v3.6.1cpimedB338
CSPI05G03400CsaV3_5G000730Cucumber (Chinese Long) v3cpicucB285
CSPI05G03400Cla97C01G000700Watermelon (97103) v2cpiwmbB349
CSPI05G03400Bhi12G000535Wax gourdcpiwgoB456
CSPI05G03400Cucsa.201930Cucumber (Gy14) v1cgycpiB322
CSPI05G03400CmaCh15G010440Cucurbita maxima (Rimu)cmacpiB298
CSPI05G03400CmoCh15G011030Cucurbita moschata (Rifu)cmocpiB288
CSPI05G03400Cp4.1LG13g03020Cucurbita pepo (Zucchini)cpecpiB189
CSPI05G03400CsGy5G000640Cucumber (Gy14) v2cgybcpiB226
CSPI05G03400Carg26222Silver-seed gourdcarcpiB0333
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G03400Cucumber (Chinese Long) v3cpicucB263
CSPI05G03400Cucumber (Chinese Long) v3cpicucB282
CSPI05G03400Watermelon (97103) v2cpiwmbB399
CSPI05G03400Watermelon (97103) v2cpiwmbB403
CSPI05G03400Wax gourdcpiwgoB484
CSPI05G03400Wild cucumber (PI 183967)cpicpiB110
CSPI05G03400Wild cucumber (PI 183967)cpicpiB158
CSPI05G03400Cucumber (Gy14) v1cgycpiB132
CSPI05G03400Cucumber (Gy14) v1cgycpiB387
CSPI05G03400Cucurbita maxima (Rimu)cmacpiB346
CSPI05G03400Cucurbita maxima (Rimu)cmacpiB425
CSPI05G03400Cucurbita maxima (Rimu)cmacpiB618
CSPI05G03400Cucurbita moschata (Rifu)cmocpiB257
CSPI05G03400Cucurbita moschata (Rifu)cmocpiB337
CSPI05G03400Cucurbita moschata (Rifu)cmocpiB414
CSPI05G03400Cucurbita moschata (Rifu)cmocpiB611
CSPI05G03400Cucumber (Chinese Long) v2cpicuB221
CSPI05G03400Cucumber (Chinese Long) v2cpicuB238
CSPI05G03400Melon (DHL92) v3.5.1cpimeB399
CSPI05G03400Melon (DHL92) v3.5.1cpimeB404
CSPI05G03400Watermelon (Charleston Gray)cpiwcgB410
CSPI05G03400Watermelon (Charleston Gray)cpiwcgB413
CSPI05G03400Watermelon (97103) v1cpiwmB406
CSPI05G03400Watermelon (97103) v1cpiwmB411
CSPI05G03400Cucurbita pepo (Zucchini)cpecpiB038
CSPI05G03400Cucurbita pepo (Zucchini)cpecpiB227
CSPI05G03400Cucurbita pepo (Zucchini)cpecpiB624
CSPI05G03400Cucurbita pepo (Zucchini)cpecpiB733
CSPI05G03400Bottle gourd (USVL1VR-Ls)cpilsiB380
CSPI05G03400Bottle gourd (USVL1VR-Ls)cpilsiB382
CSPI05G03400Melon (DHL92) v3.6.1cpimedB394
CSPI05G03400Melon (DHL92) v3.6.1cpimedB400
CSPI05G03400Melon (DHL92) v3.6.1cpimedB403
CSPI05G03400Cucumber (Gy14) v2cgybcpiB126
CSPI05G03400Cucumber (Gy14) v2cgybcpiB186
CSPI05G03400Silver-seed gourdcarcpiB0543
CSPI05G03400Silver-seed gourdcarcpiB0576
CSPI05G03400Silver-seed gourdcarcpiB1029