Lsi08G011680 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTGGGATGAAGAAAACGGATTATTGAATTACGTTTGAAAATTTATCACAGGAATTGAATTGGAATTTGGAACGACATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACGTAAGTTAATTCACAAATTTTCCATTCATTTTCTTCAATTTTTGAATTTCAATCAATGAAATTTTACACAGCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGTGAGTGGTTTGGATTTTTTTTTTTTTTTCAAAATTTTAGTGAGTTTTGAATTGATTGGAGTGGAATTTTGTGTCGATTTTTGCAGGGTTTGAATTGAAAATTGATGGAGAAAGGTTGAATATTTAAGGGTTTTTTTTTTTTGGTGACTGGTTCAAAATTGTAGAACTGTGAGGAAGATGAAGTCCATGTGTTCGGTTTCCGCCATTGACACACGCACCTAATTTCTTCTATACTTTTCCCTTATTAATTGTATATTGGAAAAAAAAAACAACTAAATAAACATTTTGTATGTTCTACTAATATTTATAAAAGATGTTTGAAGATATTTATGGATATATAATATCAATATTAAACCTTTAATTTAAAGATA TTTTTGGGATGAAGAAAACGGATTATTGAATTACGAATTGAATTGGAATTTGGAACGACATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGGTTTGAATTGAAAATTGATGGAGAAAGGTTGAATATTTAAGGGTTTTTTTTTTTTGGTGACTGGTTCAAAATTGTAGAACTGTGAGGAAGATGAAGTCCATGTGTTCGGTTTCCGCCATTGACACACGCACCTAATTTCTTCTATACTTTTCCCTTATTAATTGTATATTGGAAAAAAAAAACAACTAAATAAACATTTTGTATGTTCTACTAATATTTATAAAAGATGTTTGAAGATATTTATGGATATATAATATCAATATTAAACCTTTAATTTAAAGATA ATGTCGGATCCTCTGTTTCTTTCTCGATTCCTCTTCTCCGTCTTCTTCGTCGTTCACCTCTTTCATCTCTCTCATGGAGATGTCGGCAGTGCTACATCTTACGGTCCTCCTTATTTACCCACCGCTTGTGCCGGAAACGATTTCTCGATGTTTCCGTCGACAAACATGTTCGCGGCGGCCGGAGAGGGAATATGGGAGAATGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTGAGCTCCGCCTTACCGAAGGCATGCGTTCCCGATCAGACGATTCAGATCACGATCGTGGATCGTGCGATTTCGACAGTGTCGAAGCCGGCGGTAGCGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATCGTTAAAGGAGCTACGTCGCTCGTTAACATCGAATTCATGCAGGTTTGA MSDPLFLSRFLFSVFFVVHLFHLSHGDVGSATSYGPPYLPTACAGNDFSMFPSTNMFAAAGEGIWENGAACGRQYLVRCLSSALPKACVPDQTIQITIVDRAISTVSKPAVADTTMVLSTTAYKSIVKGATSLVNIEFMQV
BLAST of Lsi08G011680 vs. TrEMBL
Match: A0A0A0LQ33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379920 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.2e-49 Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 1
BLAST of Lsi08G011680 vs. TrEMBL
Match: A0A061GQI5_THECC (Plant natriuretic peptide A OS=Theobroma cacao GN=TCM_038363 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.9e-38 Identity = 80/130 (61.54%), Postives = 102/130 (78.46%), Query Frame = 1
BLAST of Lsi08G011680 vs. TrEMBL
Match: A0A151R1V0_CAJCA (EG45-like domain containing protein OS=Cajanus cajan GN=KK1_042306 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 7.3e-38 Identity = 83/136 (61.03%), Postives = 102/136 (75.00%), Query Frame = 1
BLAST of Lsi08G011680 vs. TrEMBL
Match: B9IKT6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01330g PE=4 SV=2) HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37 Identity = 78/121 (64.46%), Postives = 98/121 (80.99%), Query Frame = 1
BLAST of Lsi08G011680 vs. TrEMBL
Match: A0A068U8D9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019532001 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.6e-37 Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 1
BLAST of Lsi08G011680 vs. TAIR10
Match: AT2G18660.1 (AT2G18660.1 plant natriuretic peptide A) HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06 Identity = 27/89 (30.34%), Postives = 42/89 (47.19%), Query Frame = 1
BLAST of Lsi08G011680 vs. NCBI nr
Match: gi|659088769|ref|XP_008445151.1| (PREDICTED: EG45-like domain containing protein 2 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.5e-55 Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 1
BLAST of Lsi08G011680 vs. NCBI nr
Match: gi|778672397|ref|XP_011649798.1| (PREDICTED: EG45-like domain containing protein [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49 Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 1
BLAST of Lsi08G011680 vs. NCBI nr
Match: gi|1009137170|ref|XP_015885910.1| (PREDICTED: EG45-like domain containing protein [Ziziphus jujuba]) HSP 1 Score: 172.6 bits (436), Expect = 5.0e-40 Identity = 84/134 (62.69%), Postives = 103/134 (76.87%), Query Frame = 1
BLAST of Lsi08G011680 vs. NCBI nr
Match: gi|1021555557|ref|XP_016169212.1| (PREDICTED: EG45-like domain containing protein [Arachis ipaensis]) HSP 1 Score: 171.8 bits (434), Expect = 8.6e-40 Identity = 86/135 (63.70%), Postives = 105/135 (77.78%), Query Frame = 1
BLAST of Lsi08G011680 vs. NCBI nr
Match: gi|1012228077|ref|XP_015937617.1| (PREDICTED: EG45-like domain containing protein [Arachis duranensis]) HSP 1 Score: 169.5 bits (428), Expect = 4.3e-39 Identity = 85/135 (62.96%), Postives = 104/135 (77.04%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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