Cp4.1LG07g02760 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG07g02760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBlight-associated protein P12
LocationCp4.1LG07 : 1837045 .. 1837711 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATACAGAGGAATTGAAGAAAAACCTGTTCGAGAATCAGAGTTTTTTTTTTTTTAATTCGTATAATATGAATTTCATATTCGATCAAATGAAATCGTAGCGAAACAATATTCAAAAGCCGACGAGTCGGATGTTGCTCTGAAAATCGCTCTCTGTTTTCATTTCACAGGAATTGAACGACATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACGTAAGTTCCATTTCATTTGCATTCTTCATGTTCTTGATTCGCGGTGGTAATTGAATGAATGAATGAAATTTACACAGCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA

mRNA sequence

TGGATACAGAGGAATTGAAGAAAAACCTGTTCGAGAATCAGAGTTTTTTTTTTTTTAATTCGTATAATATGAATTTCATATTCGATCAAATGAAATCGTAGCGAAACAATATTCAAAAGCCGACGAGTCGGATGTTGCTCTGAAAATCGCTCTCTGTTTTCATTTCACAGGAATTGAACGACATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA

Coding sequence (CDS)

ATGTCGAAGCCTCTGTTTCTCTCCGTCTTCTTCCTCGCTCATCTCTTCCATCTCTCCCATGGAGATATCGGCACTGCAACGCATTACAGTCCTCCATATTTACCCACCGCCTGTGCCGGAAACGATATCTCTCTGTTTCCGGCGAGTAGTCTATTTGCGGCGGCCGGAGAGGGAATATGGGAGAACGGAGCGGCTTGTGGAAGACAATACCTAGTGAGATGCTTCAGCGCCGCCGTGCCGATGTCGTGCGTTCCGGATCAGACGATTCAGGTCACGATAGTCGATCGTGCGATTTCAACGGTGTCGAAGCCGGCGAAAGCGGCTACGACGATGGTGCTGTCAACGACGGCGTATAAATCCATCGTTCAAAGAAATGTGGCCTTCGTGAATGTCGAATTTCGGGAGTGA

Protein sequence

MSKPLFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRNVAFVNVEFRE
BLAST of Cp4.1LG07g02760 vs. Swiss-Prot
Match: EGC_CITJA (EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.4e-08
Identity = 43/139 (30.94%), Postives = 65/139 (46.76%), Query Frame = 1

Query: 2   SKPLFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAG--NDISLFPASSLFAAAGEGI 61
           +K L ++   +  +   ++   GTAT Y+PPY+P+AC G  ND        + AAA   I
Sbjct: 5   TKVLVITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKND------GVMIAAASYAI 64

Query: 62  WENGAACGRQYLVRCFSA---AVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTT 121
           W NGA C + + V+C  A     P  C    ++ V IVD        PA    T+ LS  
Sbjct: 65  WNNGAVCNKSFRVKCTGATNQGTPHPC-RGGSVLVKIVDLC------PAGCQATIDLSQE 124

Query: 122 AYKSIVQRNVAFVNVEFRE 136
           A+  I   +   + +EF +
Sbjct: 125 AFSQIANPDAGKIKIEFNQ 130

BLAST of Cp4.1LG07g02760 vs. TrEMBL
Match: A0A0A0LQ33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379920 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.7e-45
Identity = 94/141 (66.67%), Postives = 109/141 (77.30%), Query Frame = 1

Query: 1   MSKPLFLS------VFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAA 60
           MS PLFLS      +FF+AHLFHLSHGD+GTAT Y PPY PTAC GND+S+FP +++F A
Sbjct: 1   MSNPLFLSRRCLFSIFFIAHLFHLSHGDVGTATTYGPPYTPTACFGNDLSMFPTNNMFGA 60

Query: 61  AGEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLS 120
           AGEGIW+NGAACGRQY V CFS+AVP SCV DQTI +TIVDRA+ST SK   A TTM LS
Sbjct: 61  AGEGIWDNGAACGRQYRVSCFSSAVPDSCVSDQTIMITIVDRAVSTSSKALVADTTMTLS 120

Query: 121 TTAYKSIVQRNVAFVNVEFRE 136
             AYK IVQ+N   V VE+ +
Sbjct: 121 RMAYKVIVQKNTPLVTVEYTQ 141

BLAST of Cp4.1LG07g02760 vs. TrEMBL
Match: B9IKT6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01330g PE=4 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 7.5e-40
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1

Query: 6   FLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAA 65
           FL +  LA LFHLSHGD+GT +HY PPYLPTAC GN  S FP+S+LFAAAGEGIW+NGAA
Sbjct: 10  FLLLLLLATLFHLSHGDVGTCSHYRPPYLPTACYGNSSSHFPSSNLFAAAGEGIWDNGAA 69

Query: 66  CGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRN 125
           CGRQYLVRC SAAVP +C+PDQ IQV IVDRA ++ S+P+    T+VLS+TA+ SI   +
Sbjct: 70  CGRQYLVRCISAAVPRTCLPDQIIQVRIVDRAQTSRSRPSSNGATIVLSSTAFGSIADPS 129

Query: 126 VAFVNVEFRE 136
              VNVEF++
Sbjct: 130 ARLVNVEFQQ 139

BLAST of Cp4.1LG07g02760 vs. TrEMBL
Match: A0A068U8D9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019532001 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-39
Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1

Query: 5   LFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGA 64
           LFL +   AHLFH S  D+GTA+ Y+PPY PTAC G+D S FP+S+LFAAAGEG+W+NGA
Sbjct: 9   LFLYLLSSAHLFHPSSADVGTASQYNPPYTPTACFGSDNSQFPSSNLFAAAGEGVWDNGA 68

Query: 65  ACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQR 124
           ACGRQYLVRC SA  P +CVPD+TIQV IVDRA ++ S+P KA TT+VLS TA+ +I   
Sbjct: 69  ACGRQYLVRCISAVAPKTCVPDKTIQVRIVDRAQTSASRPLKAGTTIVLSNTAFGTIANP 128

Query: 125 NVAFVNVEFRE 136
             AF+N+EF++
Sbjct: 129 GAAFINIEFQQ 139

BLAST of Cp4.1LG07g02760 vs. TrEMBL
Match: A0A061GQI5_THECC (Plant natriuretic peptide A OS=Theobroma cacao GN=TCM_038363 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-39
Identity = 81/127 (63.78%), Postives = 101/127 (79.53%), Query Frame = 1

Query: 9   VFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAACGR 68
           +  L  LFHLS+GD+G A HYSPPY+PTAC GND S FP+S+LFAAAGEGIW+NGA+CGR
Sbjct: 11  ILLLTTLFHLSYGDVGAAAHYSPPYIPTACFGNDASQFPSSNLFAAAGEGIWDNGASCGR 70

Query: 69  QYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRNVAF 128
           QYLVRC SAA P +C P QTIQV IVDRA ++VS+P+    T+VLSTTA+ +I   + A 
Sbjct: 71  QYLVRCISAATPRTCKPGQTIQVRIVDRAETSVSRPSSNGATIVLSTTAFGAIANPSAAS 130

Query: 129 VNVEFRE 136
           VN+EF++
Sbjct: 131 VNIEFQQ 137

BLAST of Cp4.1LG07g02760 vs. TrEMBL
Match: F6H3S8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04670 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-38
Identity = 77/131 (58.78%), Postives = 104/131 (79.39%), Query Frame = 1

Query: 5   LFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGA 64
           L   +F LA L H+  GD+GTA  Y+PPYLPTAC GND+S FP+S+ FA+AGEGIW+NGA
Sbjct: 116 LLALLFILAGLVHICSGDVGTAGQYAPPYLPTACYGNDVSEFPSSNFFASAGEGIWDNGA 175

Query: 65  ACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQR 124
           ACGRQYLVRC SA VPM+C+  QTIQ+ IVDRA+++VS+P++   TMVLSTTA+ ++   
Sbjct: 176 ACGRQYLVRCISAVVPMTCIAGQTIQIKIVDRAVTSVSRPSRNGATMVLSTTAFGAVANA 235

Query: 125 NVAFVNVEFRE 136
           + + +N+EF++
Sbjct: 236 SASSINIEFQQ 246

BLAST of Cp4.1LG07g02760 vs. TAIR10
Match: AT2G18660.1 (AT2G18660.1 plant natriuretic peptide A)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 29/94 (30.85%), Postives = 43/94 (45.74%), Query Frame = 1

Query: 3  KPLFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWEN 62
          K + + + F   L  ++    G A +Y PPY  +AC G         +L       +W+N
Sbjct: 7  KFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQ-----RETLVVGVKNNLWQN 66

Query: 63 GAACGRQYLVRCFSAAVPMS-CVPDQTIQVTIVD 96
          G ACGR+Y VRC  A          +T+ V +VD
Sbjct: 67 GRACGRRYRVRCIGATYNFDRACTGRTVDVKVVD 95

BLAST of Cp4.1LG07g02760 vs. NCBI nr
Match: gi|659088769|ref|XP_008445151.1| (PREDICTED: EG45-like domain containing protein 2 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48
Identity = 96/135 (71.11%), Postives = 117/135 (86.67%), Query Frame = 1

Query: 1   MSKPLFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIW 60
           +S+ LF S+FF+AHLFHLSHGD+G+ATHY PPYLPTAC GND S+FP +++F AAGEGIW
Sbjct: 9   LSRCLF-SIFFIAHLFHLSHGDVGSATHYGPPYLPTACFGNDFSMFPTNNMFGAAGEGIW 68

Query: 61  ENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKS 120
           ENGAACGRQY VRCFS+AVP SCV DQTI++TIVDRA+STV+K A A TTM LSTTAYK+
Sbjct: 69  ENGAACGRQYRVRCFSSAVPNSCVRDQTIRITIVDRAVSTVAKAAVADTTMTLSTTAYKA 128

Query: 121 IVQRNVAFVNVEFRE 136
           IVQ + + VN+E+ +
Sbjct: 129 IVQGSASLVNIEYTQ 142

BLAST of Cp4.1LG07g02760 vs. NCBI nr
Match: gi|778672397|ref|XP_011649798.1| (PREDICTED: EG45-like domain containing protein [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 94/141 (66.67%), Postives = 109/141 (77.30%), Query Frame = 1

Query: 1   MSKPLFLS------VFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAA 60
           MS PLFLS      +FF+AHLFHLSHGD+GTAT Y PPY PTAC GND+S+FP +++F A
Sbjct: 1   MSNPLFLSRRCLFSIFFIAHLFHLSHGDVGTATTYGPPYTPTACFGNDLSMFPTNNMFGA 60

Query: 61  AGEGIWENGAACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLS 120
           AGEGIW+NGAACGRQY V CFS+AVP SCV DQTI +TIVDRA+ST SK   A TTM LS
Sbjct: 61  AGEGIWDNGAACGRQYRVSCFSSAVPDSCVSDQTIMITIVDRAVSTSSKALVADTTMTLS 120

Query: 121 TTAYKSIVQRNVAFVNVEFRE 136
             AYK IVQ+N   V VE+ +
Sbjct: 121 RMAYKVIVQKNTPLVTVEYTQ 141

BLAST of Cp4.1LG07g02760 vs. NCBI nr
Match: gi|566213631|ref|XP_002324844.2| (hypothetical protein POPTR_0018s01330g [Populus trichocarpa])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1

Query: 6   FLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAA 65
           FL +  LA LFHLSHGD+GT +HY PPYLPTAC GN  S FP+S+LFAAAGEGIW+NGAA
Sbjct: 10  FLLLLLLATLFHLSHGDVGTCSHYRPPYLPTACYGNSSSHFPSSNLFAAAGEGIWDNGAA 69

Query: 66  CGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRN 125
           CGRQYLVRC SAAVP +C+PDQ IQV IVDRA ++ S+P+    T+VLS+TA+ SI   +
Sbjct: 70  CGRQYLVRCISAAVPRTCLPDQIIQVRIVDRAQTSRSRPSSNGATIVLSSTAFGSIADPS 129

Query: 126 VAFVNVEFRE 136
              VNVEF++
Sbjct: 130 ARLVNVEFQQ 139

BLAST of Cp4.1LG07g02760 vs. NCBI nr
Match: gi|1021555557|ref|XP_016169212.1| (PREDICTED: EG45-like domain containing protein [Arachis ipaensis])

HSP 1 Score: 169.5 bits (428), Expect = 4.1e-39
Identity = 78/127 (61.42%), Postives = 103/127 (81.10%), Query Frame = 1

Query: 9   VFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGAACGR 68
           VFFL+   H SH D+GTA+HY PP+LPTAC G D S FP+S++FA+AGEGIW+NGAACGR
Sbjct: 19  VFFLSIFIHFSHCDVGTASHYGPPFLPTACYGKDASEFPSSNMFASAGEGIWDNGAACGR 78

Query: 69  QYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQRNVAF 128
           QY VRC SAA P +C+P Q IQ+ IVDRA STVS+P++A T+MVLSTTA+++I   + + 
Sbjct: 79  QYQVRCISAAAPRTCIPGQLIQIKIVDRAQSTVSRPSRAGTSMVLSTTAFQAIANASASL 138

Query: 129 VNVEFRE 136
           +N+EF++
Sbjct: 139 INIEFQQ 145

BLAST of Cp4.1LG07g02760 vs. NCBI nr
Match: gi|661891540|emb|CDP04805.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 169.5 bits (428), Expect = 4.1e-39
Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1

Query: 5   LFLSVFFLAHLFHLSHGDIGTATHYSPPYLPTACAGNDISLFPASSLFAAAGEGIWENGA 64
           LFL +   AHLFH S  D+GTA+ Y+PPY PTAC G+D S FP+S+LFAAAGEG+W+NGA
Sbjct: 9   LFLYLLSSAHLFHPSSADVGTASQYNPPYTPTACFGSDNSQFPSSNLFAAAGEGVWDNGA 68

Query: 65  ACGRQYLVRCFSAAVPMSCVPDQTIQVTIVDRAISTVSKPAKAATTMVLSTTAYKSIVQR 124
           ACGRQYLVRC SA  P +CVPD+TIQV IVDRA ++ S+P KA TT+VLS TA+ +I   
Sbjct: 69  ACGRQYLVRCISAVAPKTCVPDKTIQVRIVDRAQTSASRPLKAGTTIVLSNTAFGTIANP 128

Query: 125 NVAFVNVEFRE 136
             AF+N+EF++
Sbjct: 129 GAAFINIEFQQ 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EGC_CITJA6.4e-0830.94EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LQ33_CUCSA7.7e-4566.67Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379920 PE=4 SV=1[more]
B9IKT6_POPTR7.5e-4065.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01330g PE=4 SV=2[more]
A0A068U8D9_COFCA2.9e-3962.60Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019532001 PE=4 SV=1[more]
A0A061GQI5_THECC3.7e-3963.78Plant natriuretic peptide A OS=Theobroma cacao GN=TCM_038363 PE=4 SV=1[more]
F6H3S8_VITVI2.4e-3858.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04670 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G18660.11.7e-0630.85 plant natriuretic peptide A[more]
Match NameE-valueIdentityDescription
gi|659088769|ref|XP_008445151.1|3.7e-4871.11PREDICTED: EG45-like domain containing protein 2 [Cucumis melo][more]
gi|778672397|ref|XP_011649798.1|1.1e-4466.67PREDICTED: EG45-like domain containing protein [Cucumis sativus][more]
gi|566213631|ref|XP_002324844.2|1.1e-3965.38hypothetical protein POPTR_0018s01330g [Populus trichocarpa][more]
gi|1021555557|ref|XP_016169212.1|4.1e-3961.42PREDICTED: EG45-like domain containing protein [Arachis ipaensis][more]
gi|661891540|emb|CDP04805.1|4.1e-3962.60unnamed protein product [Coffea canephora][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009009RlpA-like_DPBB
IPR007112Expansin/allergen_DPBB_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g02760.1Cp4.1LG07g02760.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 35..135
score: 11
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 8..134
score: 8.0
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 57..132
score: 3.
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 10..135
score: 2.06
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 1..134
score: 8.4
NoneNo IPR availablePANTHERPTHR22595:SF47SUBFAMILY NOT NAMEDcoord: 1..134
score: 8.4

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g02760Cp4.1LG11g03350Cucurbita pepo (Zucchini)cpecpeB146