Lsi08G001020 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G001020
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr08 : 2126407 .. 2138381 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCCAGGCTTCCTGTATCCAGACGACAACCAATAGAGTCTTTTGCCACTTTGGAATTGATCTCATTGAGCTCATCACAAGTTTCGCCAGCATATTCTTTGAATATTCTTTTAGAATCTGTCGACTATGTTAAGCTGGTTCAATCAGCTACTAAAACTGGGAACTTGAACCATGGAAAACTTGTTCATTCCCATATGATTAGAACTTCTTTCAGGCCTTGTCTATTTTTACAGAACAATCTTCTTAACATGTACTGCAAATGTGGGGATACACATTCTGCTGACAAATTGTTTGATAAAATGTCAAAACCAAACATTATAACTTACAACTCTTTGATTTCTGGATATATTCAGATAGGCAACCATGACAAGGTCATGATTTTGTTTAATAAAGCAAGAAGACTTGGTTTGAAACTTGATAAATACACTTGTGCAGGCGCTCTTACAGCATGTAGTCAAAGTGGGAATCTTTCTGCGGGTAAGATGATTCATGGGTTAATTTTAGTTTGTGGATTAGGTTCCCAAGTTGTTTTGACCAATTCCCTTATTGATATGTATTCAAAATGTGGCCAGGTTGATCAGGCAAGGATTTTGTTTGATCATTCTGATAAGTTAGATGGCGTTTCTTGGAATTCGTTGATTGCTGGGTATGTGCAAAATGGAAAATATGAGGAGCTGTTGACAATTCTGCAGAAAATGCATCAATATGGATTGGCGTTCAACACTTTTACTCTAGGAAGTGCTTTGAAGGCTTGTAGCTCAAATTTCAGTGGGTGTAAAATGTTTGGGACAATGCTACATAACCTCGCAATCAAACTCGGCCTACATCTGGATGTTGTTGTTGGCACTGCATTACTTGATATGTATACAAAAACTGGAAGTTTGGGTGATGCTATTCAAATCTTTGACCAAATGGTGGACAAAAATGTTGTGATGTATAATGCAATGATGGCTGGCTTGCTCCAACAAGAGACAATAGAAGATAAATTTGCGTACAAAGCCCTCAATCTTTTCTTTGAGATGAAAAGCTGTGGAATAAAACCTTCCATGTTTACATATTCAAGCTTACTTAAAGCTTGTATTACTGTTGAGGATTTTGAATTTGCAAAGCAAGTTCATGCCTTGATTTGCAAGAATGGCCTTCAATCGGATGAGTACATTGGGAGTGTTCTTATTGATTTGTATTCTTTGTTAGGTTCAATGAAGGATGCTTTATCATGTTTTAATTCAATTCATATTTCGAAGATAGTCCCAATGACTGCCATGATGGTTGGTTATCTTCAAAATGGAGAATTTGAAAGTGCATTGTCTTTGTTCTATGAACTTTTGACATCCGAAGAGAAACCTGATGAGTTTATTTTGTCCACAATCTTGAGTGCTTGTGCAAATATGGGCATGTTAAGATCGGGAGAACAAATCCAGGGGTATGCAACCAAGATAGGCATCTCGAGATTCACCATCTTTCAAAATTCACAGATTTGGATGTATGCTAAGTCTGGAGATCCTTATTCAGCCAATCTAACCTTTCAACAGATGGAAAATCCTAATGCTGTGTCCTGGTCAACAATGATATGCAGCAGTGCACAACATGGGCATGCAGTGGAGGCTATGAGATTTTTTGAGCTGATGAAGAGTTGTGGAATTGAGCCTAACCACTTTGCCTTCCTTGGAGTTCTAATTGCGTGTAGTCACAGAGGGCTCGTTGAAGAAGGATTAAGGTAAGTCATGAAGTCTACTTTCTTGTTTTTAAATGTTGAAAGGCTTTGTGATAAAAGGATCATGGCAGGTGTTATGGAGGGTTAGTCTAATCTTAAGTCTCTTGTCCTATAATTTTATGAAAAGGATTTGTTAGTTGGTCTGATTTTTATTTATTTATTTTTCTCGCTTCTGCTCCTGCTCCCTCGAGGCTTAAACAAGGTTTGGAGGTGTAGACTTCTGTCTCATGCTCCTTTCAGTTTTTAGTTTCCCTATTTGGTTTTTTAAGCAAAAAATTGCTGGTGCCTTCTTTTGGCCTTTGATTTCCCCCCTGAAATTTAATCCAAAAAGCTCTGTTATATCATATATGGTTAATGTATTTTATGTGGTTAATTTTTCAATCCAAAAATGTGGAGTATTTTAGCTCTCTGCTGTTTTGGAGGGTCTCTCTTAGTCTTGTGCATGAATATGTTTCTATTTCTTAATCCATCCATTTGATTTTGTTGGTGACAGGTACTTTGATACAATGGAGAAAGATTACAATATGACGATTCATGTCAAGCACTGTGTCTGTGTAGTTGATCTACTTGGTCGAGCTGGAAGGTTGATCGATGCAGAAAGTTTAATTTTGCACTTAGGTTTCAAGCATGAACCAGTGATGTGGCGAGCTTTACTGAGTGCCTGCAGGATTCACAAAGATACATTTACTGCACAACGTGTTGCTCAGAAATTAATAGAGCTTGAACCTCTGGCATCTGCATCTTATGTGCTTCTTTATAATATTTATATGGATGCTGGAAACAAGTCAGATGCCTCTAAAGTTAGGAAGTTAATGGAAGACCGGAGAATTAAGAAAGAACCTGGTCTAAGCTGGATACAAGTTGGAGATAAAGTCTACTCATTTGTTTCGGGTGATCGATCTCACAAAAACAGTGAACTGATTTATGCAAAGTTGGACAAAATGTTAGCAAGGACGAAGAGATTAGATTCGGCGAAGGACACATCTGATTACAAAATTGAGCACGAATACATGACCAACGTGAACTATCACAGTGAAAAGTTGGCTGTGGCTTTTGGGGTTCTCCATTTGTCAGAATCAGCTCCAGTGAGAGTGATGAAGAACCTGAGAATTTGTTTGGACTGTCACATGACAATGAAGCTCTTCTCAATAGTTGAGAAAAGAGAGATAATTCTTAGAGATTCAGTTCGTTTCCATCATTTCAAAGACGGGTCTTGTTCTTGTGGGGACTATTGGTAGTTTAAATGGATTCATATTTGTTGTTTACATCGAAAATTGAAGTATCAACAGACTATGCTATCTCGTATTTAAAAGGATAGAAAAGGATATGATGAAGCTACAGAGCATGTTTTCTTGCAAGTCAAGCAACTATTCCTTCTGAGATGTGTTCATACATAGCTCTCAATTGCAATGTGGAGGGAGGTTATTCCTTCTGAGATAGCCAAGGGACTTTAGATTTATCAACTCTCAGAATAAGTTCTTATAGTCATTGATGGTGAGCAAAGCTAATACCTTTGAACCATGGCTAACCTTTGTCCTGACTGAGGTGTGTTGTGCAGTAACAACAGCGAAAGCTAATATCATCTATTTATTTATATGCAAATTCCTGATTAAACACTTTTGATCTTGGAGTTGTTATTCTTCATGCATGAACTCCATTATGATATCAATCCTCCTATGTACCTTACCACGCTTTTATCTTGGAAGTGAATCGACTTTGTGATGCTATGGATGGCTGCTAAAGTGCAAAGGTGAACTCACTCGAATAAAAGAGGATTATGCATGTCAGGCCCTCAGGTGTCATTTTTTTGCTTAGTTTACTATACCTATTGTGCATCATTTCGAGTATAGTTTGATGGATAAGACACCAGTTTCATCTCAAAAGTTGATAGTTCGATCCTTACTAATCGTTGAACTAAAAAAAATGTGTATCTTTTTCTTTTGTTATTATTATTATTTTCATGTTCATGGAGCGTCTTTGGATTTTTTATCCCCACTTATTTGTAAATCTTGTGGTTCCTATCAGAAATTTATTATCCATATAAGAGGAAGAAATCAGAAGAGAGAATGTGTTGGAGGATGATGTTGTCATATTACATCTATTTTTTTTAGCGGAAGACCCAATTGTGAAGGATTTATATACTTGAGAACGAAATTGAGAATTATTATTTAAAAAAAAATAAATAGAAAGACTTGTATGTGACATACATGCATGGTTGTTTTTCCTGATTATTTCTTTTTACAAAACATACATGGGTGGACCTAGAGAATATATTTTAGGAAGGCTAGACTTAAAAGTAATATATTTTAATTTTAAAACATTCTTAAAAATACAATCAAACTTATAGAAATATTTCATAATCACAAGTTTTCTAGGTACCTTATTTATAGATTATGTATATTCTGTTTGAGTTCTATTAGTGATAGGCGTCAATCATGTACAGTTTTTCCATGGTTCCATAACTAAGGCGGAAAAGAGATGGAGTGTAACAACATATCCAATTTTTTTTTGTTTAATAACAATTATTATAATTTAACTATGATTTTAAATTAATGCAAAAAAATGAAAAAAAATAGTAGATAAGTTAATTATATTGATAACAAATTATAACATATATAGTTAAGTGTTATAGTTTAATTGAAAAGTATTCAAAATGTGTTTCCATGCTTTTAATTTAGGATAATTATTGCATAAATGGAGCGATTTAATGTCATTATGCTAAGAGATTTTTCAAAAATTCAAGCTAAGGAGTGAGATTTAGAACATTGAAGATAAAGATGGTAAAAAGCGAGTCTTAGATGAACTATAGGGCCATTTTCATGAAGAAAGGGGGAGAAAAAAAGGCCAAAATGGTGAAGGAAGGAGTGTTGCAATGCTACCCATAACGATACATGACCCTAGAAAACCCGAGAGTTGTGAAAGGGGTAGAGTGTAGTAATGCTAGGAAGCACCATTGCAACACTACAATGTTGACATCCAACAGTGTCACTCAACGTTCTAGAGCCCTAAGGCCCACTTTTGCCAACGTCACAATGCTGGTGCCTATTCTTTTAATTTTATATGGAGTTAAAGAGTCTAAGTTTGTGTTGCAGAAGTCAATCAGAATGTCTGTGTTTGAGATACTGAAATGAGTTAAATTATTTTATCAGAGATATCTAGTGTATTTTTTTTTAACCTTACATTGAATTTTATTTTTGTCACTCGGTTCCTACTAAGATCTTAACATTATAATTGAGATTCACGACAATTGAATAAACTCATGAACTTTAAGTTACACAAGACATTTTCTTGCTTAATTTTTTAACTATTCAATTACACACATGTTTTTTCTCCAATTCTCAACAATCAATTAAGATGTCGACTTAAAAATTTCACACATACTTTACAATTTTCTGCTGGTAAGCATTGTACTCAAGGTAGACAAAATATTATATTTTCTTAAGATCAACAAACCTACAACATACTTTTACATTTGTGGAATGTATGACTGAAATATAGACAATAAATAAAGTAGGTCATCAATCAGTTTATGATTTTTTTATGACATTTTATGTCAAATTGTTAGTTAGAGTTTGTATTACACATGCATATTTGAAAATTTTAGCAATATTGCATCTAAAATTCAGAATGGATGTTTGAAAAAAATGCATCTATTTGTCTTAAGGAAAAAAACTCTCAATTTTATTTTAATACAAATGCATATGTATTATGTAGGTTTTATTATTATTTTCTTTTGTAACTACACATGTATCAATATCATAGAGTTAAAATAATGGGGATTGCCAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAACTTAAATTAGGATCTCTTCAAATTGCCTAAGTAAAAACATTTACAAAAATCTTAACTACATTTTCTCAAAATTATTTTTATATATACACAAGTTTGTTTCGTTTGACAACTACTCAAAATATTTATATGAGTGTCAGATTATTATAAAAGGCGACCGTTAAACATTAAAAACATTTTCATAGGTCGAGTTTTTTTTGTTCGTTTATATTTTTAGTATATGATTGACGAAGTTGGTCGTTAGAGTTAGTTGTTGGAGATAATCAACAGGGTTGGTCATCTAAGGTGATCATTAGAGTTGATCATGAGAAGATGCTCATTGATAGAGTTGATCATTAAAGGTGATATTCATCAAAGTTGTTGGAGGTATGAGTGGTAGTCAGAGTTGGTTGTTTGTAGGGTTGTTCACTTAAACCAACCAAATAGAATCGAACCGAACTAAACTGAAAATTCATTATTTTACGAAAGACTACTTCAGTTCAATTCAGTTTAATATAATAATGAAATCGAAAATTTCGATTTGGTTTGATTTTAGATTCGAAAACCAAATGGAAATGAACCGAACCGTTATAATATATAGTTTCGGGTCATTGAAATTTTAGGTCTGCCTTTGCTGTTCTCCGATTTGCGTTTCACGTCTCACAGTGACCGAGTCACCACCTCACTGGTCTTTTCTCTTCTCCTCGACGTCTTCGTCTCCGGCCACTGTCGACCTTGTCTCACTCCGGCCACCGTCGACCTCGTATCCTCCGGCCAACGTCAACCTCGTATCCCTCCGGCCCCGTCGATTTCTCCTCAATTCTCACGAGTAACGACTCACACCGTAAAGACTATTTTGTAAAATTGGTTTTACGATTTGTATGTAAGAATTTGAATTAACTTGAATGATTTAGGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCTGTTCCTAGCTCTGGCAAACAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGTATTTTTTTTTTATCAGTTAAATATATGCTTGTGTTACATTTTTTTAAAAGGAATTCTTTTATTTGCAAGTTCATGTTCACTGTATTGTATAGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGGTAGCTTGTGGATACTATTTTTGTTTTCTTGATTTATCTTTTACAACTTGGAAGTTAATGGAGTACATGATTGTATTTTCTTTGTGAAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGAGTTGGTTATTCCTTTTTTGTTAGTTTATTATCCAAATTTATGGCATTTGCATTGATTGTATGGAGCCAAGTTTACTGAACGATAATGGGATGACATCTCACTTTATGGAGTTCAAATGCAACCTAAGAAATAGTTACATCTCTATCTCCGCACTAACTGCAGCTTGTTTCATTGGTTATTTGTTGGTTTTCAGGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGGTGAGTTTTTCTTGACATGAGGTTTGACCAACTCTTTGACATGTTGAAAGGAATGCTGTCATCTAACATAAAAAAAAATTTGTTTTAAATTTTTATTCACGCTATTTACTTTATAATTATCTTCTTTGTTTGAAATTGTTATGGTTTGTTTTCATGTTTCTTTGAATCTTACAGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGTCTATACTTTTCCTTTTCCTTGATATATCCCTAATTGATATCATTTTTTTCAATTTTAGATTTGAAACCTAAATTTGACTAACCTGGATGCATTTTGTGTGTTGAAACTTTTACTGGTATGACAGGAATTGAAAAAACAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAGCAATTATCTTGGATTGTAAGTATAATTCTTTGGTTCATATGTAACGAGTCTAATATTCTTTTTGTTTAATTATGTAATGCCATAAAAAGAGGTGTTTTATAGTCTTTAGTGCTAAAAATGAAAGAAAAATTAGAATGAAATTTGTACTTGGAAAAAAGCTCAAACTTATTTTATAGGTTGACAAAAAATTTTACTTCATCATTATCAAGTTTTGTTTGATCATAATCTTATTATTTGTGCACACTGGTTTGCTGTATATAGATTTTAGATTGTTTTCATGTATTTTCAGGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATGTAAAACTTCTCTTCCTCTCTTTTTGAATGAGTCTTTCCCTCAAAGGTGTGCACTTAGGTGGCCTATGGTAATTATTTTCTAATAGTAGTCATGCAAGCGGGAGACCTTTGAACTTTGTACTTATGTGCTTGTGATTAGCCCACGATTAGCACAAGACATTAATATTTTAGCTGGGATTTAATTTGATAACTCTGAGTCGTAGAACACAGGCTTGGTGCTGATATTAACTTGCTTTCTAAGAAAGAGAAAAGAAAAGAAGAAAAAACCAGGCCTGGACATTAAGGGAAAGGGAAGTTTCTTCATTTGATTTCTGACATACACACACTCTAAAATGGTTTAGAACACGTGATGTGAGATATTTGATTGTTTTGTTATTTTTTGAAATCTTTAGCACATTGGGGTTCAGAATATGTGAGGAATATGGTTTTGTAGAAATGAGAAAATTAGGAAAAGAAAGGATATGTTTTCATTAAAAATGGAATTTGTATAAAGTAATAAAAAGCATAAAAATCCATAGAAATTATATTGAAAGTGAAAGAGATTATGCAGATTTTGCTTGATAAATCTTACTGGCTTGATGTGATAAGTTTGGCTCTTTTGGGTGGGACTTTATTTTTGTATGCACTTTGTACTCTTTCATTGTTTTTCTCTCTATGAAAGCTCGGTTGCTCATAGAAGTGAATGTTTAAAATCTTTAATGTGTCTAAAAGCATATTAAAGTACTCCAATAAAAATGTCCCGGTGAGTATCTTGGTGTCACTGTATTTAAAATCTAATACATGTCTTGAATATATGTGCGGGACCTTCAGGTCATGTCCTAGTTGTTCGTTCAGAATCTGCTGCGTGGGTGGCTTTGTAGAAAATTATTAGTTTGGTAGTTCATTATGTTTTGACTTTACCTTCTATTGTTGGCCTCTGTTTTTGTTGCTTTTCCTAGGGTAATATTTAATAGAATCCTTGGTTGCTATTTATTTTTTTTGTTTGACTACAAACAATTGCGGGGATGGGGGATTGAACCTTCGACCTCTAGAGATGAAGACTATGCTAATTGCCGTTGAGCTAAGCTCACTTTGGCCTTTTGTTGTCGTTGATTGTACTAATGATGACGATTCATTAAAAGAGTCATTAAGTTTTTTTTGTTAGATTTTATGTTTCTATTTGAGCTTCGGGGAAAGGGAAGGAGGGACCAAGTGATGTAAATATGCAAGGGTTGAGGGCCATATGTGGGGGAATTCGTGAGCTGTGATTTGGTGGTGACCATTGGATTTGGCCATTTGGGTAATTATACTTTTTCCATTGGTGTGTTAGAGGGCCTCTTAAAGGCCATTTCAGAGAGGAGAGGGTATTTTTTTGGTACTTCCTGAATTCTAGCCCTTGTTGAGCAATGAGCATTGTGAAAAGGCGGGAGCTATCGGAACTCCCTTGGCATTGCCAAAATAGTGAATACATAATTCGAGCTCTATAAAATTACCCTCCAGGTCTTATTTTACTGGATTGGAGCTTCTTCTCGTAGTTTGACTCTCTTCTACTGGCTTTATTTTTGTATGTTCATACTCTTTCACTTGTCACCATGAAAGTTAAGTTATTTATAGATAAAAAATAACGATTTCTTAAAAGAATTAATTTGATTAATGGGAAAGCCCATTATATTTTATGGATTATGACTGTTTTTATCTCTAGCGCTTTAAGATGCTTCACATGATGGTTTTGCCTTTGTAATAGCTGGTGACATTGTCTTGTTTTTTTCAGCTGAAATTCGAAAGCAAAGGCTTGTTGAAAAATACACGAGTCTTAAGGTATGAATCTGTCATTTCTCAACATACTTGTATTTCAACATAGTCAGTTTAATGCTTTTTTATGCTTCTGAATTGGCAATTAACTATTCTGGAGTTTGAACAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAACAAGAGTGAAGGTTAACAGGTATTCTCATGCTTGCTTTAAGGAGATGATATTTCCATATTTTTAAAAATTTAGCCTCACTCAAGATTTTACTTTTCATTTCTTGGGTTATTGTAGAAGCAGGGTAGAGATAAAGTTTTAATTTGTTAAAATGTCATGTATTGCTTGATATGTAAATCTGATGTTAGATTTCAAATATTTGAAAGAACTTATAGTCTCTTTTTAGCTATTTTTTAAAATCATGTGCATATGTCATAGTACCACTTTCAACCTTTTCATTAAAATAATCATCTCCAATATAGGGGAGGAAAATCTTACCCAATACTGATTTTGTTTGTTCTTGTAGAATTATGATCACACTTTTGGAAAAAGGTGCCATTATGTGTCTTGAAGTATAGTACTTGGGAAAAATTTTCTATAATATGGTTGTATGGAAAATTTTTGAGTTGTGCTCAAACCATAGAGAGAAGAGAGAAGAGAGAAGTAGGAGAAATTTTCATACTACCTCCACTTATTGTATGTCACGTCAATGTGCTTTTAAAAATTGTGTTACTTCACTGCGCTTTTAAAACTAAAGTGGAACCCACATGCATCAATATGAGGTTCACAAATATTTATGAAGATAAATTTATAGTGTAAATGCAAAGAGTGGTTTTACAGGAATACTAGAAATTTTTCCATACATCTTGTACGAGCACTGCTTGTTCGAAAATTGAACATTAGCCTTGGAAAAGGCAAAAGTTAGAAACACCTGAAATTGACTGTTGAATTGTTAGGATCGAGTATGGCAGGAAATGGGG

mRNA sequence

ATGTTTCCCAGGCTTCCTGTATCCAGACGACAACCAATAGAGTCTTTTGCCACTTTGGAATTGATCTCATTGAGCTCATCACAAGTTTCGCCAGCATATTCTTTGAATATTCTTTTAGAATCTGTCGACTATGTTAAGCTGGTTCAATCAGCTACTAAAACTGGGAACTTGAACCATGGAAAACTTGTTCATTCCCATATGATTAGAACTTCTTTCAGGCCTTGTCTATTTTTACAGAACAATCTTCTTAACATGTACTGCAAATGTGGGGATACACATTCTGCTGACAAATTGTTTGATAAAATGTCAAAACCAAACATTATAACTTACAACTCTTTGATTTCTGGATATATTCAGATAGGCAACCATGACAAGGTCATGATTTTGTTTAATAAAGCAAGAAGACTTGGTTTGAAACTTGATAAATACACTTGTGCAGGCGCTCTTACAGCATGTAGTCAAAGTGGGAATCTTTCTGCGGGTAAGATGATTCATGGGTTAATTTTAGTTTGTGGATTAGGTTCCCAAGTTGTTTTGACCAATTCCCTTATTGATATGTATTCAAAATGTGGCCAGGTTGATCAGGCAAGGATTTTGTTTGATCATTCTGATAAGTTAGATGGCGTTTCTTGGAATTCGTTGATTGCTGGGTATGTGCAAAATGGAAAATATGAGGAGCTGTTGACAATTCTGCAGAAAATGCATCAATATGGATTGGCGTTCAACACTTTTACTCTAGGAAGTGCTTTGAAGGCTTGTAGCTCAAATTTCAGTGGGTGTAAAATGTTTGGGACAATGCTACATAACCTCGCAATCAAACTCGGCCTACATCTGGATGTTGTTGTTGGCACTGCATTACTTGATATGTATACAAAAACTGGAAGTTTGGGTGATGCTATTCAAATCTTTGACCAAATGGTGGACAAAAATGTTGTGATGTATAATGCAATGATGGCTGGCTTGCTCCAACAAGAGACAATAGAAGATAAATTTGCGTACAAAGCCCTCAATCTTTTCTTTGAGATGAAAAGCTGTGGAATAAAACCTTCCATGTTTACATATTCAAGCTTACTTAAAGCTTGTATTACTGTTGAGGATTTTGAATTTGCAAAGCAAGTTCATGCCTTGATTTGCAAGAATGGCCTTCAATCGGATGAGTACATTGGGAGTGTTCTTATTGATTTGTATTCTTTGTTAGGTTCAATGAAGGATGCTTTATCATGTTTTAATTCAATTCATATTTCGAAGATAGTCCCAATGACTGCCATGATGGTTGGTTATCTTCAAAATGGAGAATTTGAAAGTGCATTGTCTTTGTTCTATGAACTTTTGACATCCGAAGAGAAACCTGATGAGTTTATTTTGTCCACAATCTTGAGTGCTTGTGCAAATATGGGCATGTTAAGATCGGGAGAACAAATCCAGGGGTATGCAACCAAGATAGGCATCTCGAGATTCACCATCTTTCAAAATTCACAGATTTGGATGTATGCTAAGTCTGGAGATCCTTATTCAGCCAATCTAACCTTTCAACAGATGGAAAATCCTAATGCTGTGTCCTGGTCAACAATGATATGCAGCAGTGCACAACATGGGCATGCAGTGGAGGCTATGAGATTTTTTGAGCTGATGAAGAGTTGTGGAATTGAGCCTAACCACTTTGCCTTCCTTGGAGTTCTAATTGCGTGTAGTCACAGAGGGCTCGTTGAAGAAGGATTAAGGTACTTTGATACAATGGAGAAAGATTACAATATGACGATTCATGTCAAGCACTGTGTCTGTGTAGTTGATCTACTTGGTCGAGCTGGAAGGTTGATCGATGCAGAAAGTTTAATTTTGCACTTAGGTTTCAAGCATGAACCAGTGATGTGGCGAGCTTTACTGAGTGCCTGCAGGATTCACAAAGATACATTTACTGCACAACGTGTTGCTCAGAAATTAATAGAGCTTGAACCTCTGGCATCTGCATCTTATGTGCTTCTTTATAATATTTATATGGATGCTGGAAACAAGTCAGATGCCTCTAAAGTTAGGAAGTTAATGGAAGACCGGAGAATTAAGAAAGAACCTGGTCTAAGCTGGATACAAGTTGGAGATAAAGTCTACTCATTTGTTTCGGGTGATCGATCTCACAAAAACAGTGAACTGATTTATGCAAAGTTGGACAAAATGTTAGCAAGGACGAAGAGATTAGATTCGGCGAAGGACACATCTGATTACAAAATTGAGCACGAATACATGACCAACGTGAACTATCACAGTGAAAAGTTGGCTGTGGCTTTTGGGGTTCTCCATTTGTCAGAATCAGCTCCAGTGAGAGTGATGAAGAACCTGAGAATTTGTTTGGACTGTCACATGACAATGAAGCTCTTCTCAATAGTTGAGAAAAGAGAGATAATTCTTAGAGATTCAGTTCGTTTCCATCATTTCAAAGACGGGTCTTGTTCTTGTGGGGACTATTGTAATGCTAGGAAGCACCATTGCAACACTACAATGTTGACATCCAACAGTGTCACTCAACGTTCTAGAGCCCTAAGGCCCACTTTTGCCAACGTCACAATGCTGGTGCCTATTCTTTTAATTTTATATGGAGTTAAAGAGTCTAAGTTTGTGTTGCAGAAGTCAATCAGAATTGACCGAGTCACCACCTCACTGGTCTTTTCTCTTCTCCTCGACGTCTTCGTCTCCGGCCACTGTCGACCTTGTCTCACTCCGGCCACCGTCGACCTCGTATCCTCCGGCCAACGTCAACCTCGTATCCCTCCGGCCCCGTCGATTTCTCCTCAATTCTCACGAGTAACGACTCACACCGTAAAGACTATTTTGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCTGTTCCTAGCTCTGGCAAACAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGGTGACATTGTCTTGTTTTTTTCAGCTGAAATTCGAAAGCAAAGGCTTGTTGAAAAATACACGAGTCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAACAAGAGTGAAGGTTAACAGAATTATGATCACACTTTTGGAAAAAGGTGCCATTATGTGTCTTGAAGTATAGTACTTGGGAAAAATTTTCTATAATATGGTTGTATGGAAAATTTTTGAGTTGTGCTCAAACCATAGAGAGAAGAGAGAAGAGAGAAGTAGGAGAAATTTTCATACTACCTCCACTTATTGTATGTCACGTCAATGTGCTTTTAAAAATTGTGTTACTTCACTGCGCTTTTAAAACTAAAGTGGAACCCACATGCATCAATATGAGGTTCACAAATATTTATGAAGATAAATTTATAGTGTAAATGCAAAGAGTGGTTTTACAGGAATACTAGAAATTTTTCCATACATCTTGTACGAGCACTGCTTGTTCGAAAATTGAACATTAGCCTTGGAAAAGGCAAAAGTTAGAAACACCTGAAATTGACTGTTGAATTGTTAGGATCGAGTATGGCAGGAAATGGGG

Coding sequence (CDS)

ATGTTTCCCAGGCTTCCTGTATCCAGACGACAACCAATAGAGTCTTTTGCCACTTTGGAATTGATCTCATTGAGCTCATCACAAGTTTCGCCAGCATATTCTTTGAATATTCTTTTAGAATCTGTCGACTATGTTAAGCTGGTTCAATCAGCTACTAAAACTGGGAACTTGAACCATGGAAAACTTGTTCATTCCCATATGATTAGAACTTCTTTCAGGCCTTGTCTATTTTTACAGAACAATCTTCTTAACATGTACTGCAAATGTGGGGATACACATTCTGCTGACAAATTGTTTGATAAAATGTCAAAACCAAACATTATAACTTACAACTCTTTGATTTCTGGATATATTCAGATAGGCAACCATGACAAGGTCATGATTTTGTTTAATAAAGCAAGAAGACTTGGTTTGAAACTTGATAAATACACTTGTGCAGGCGCTCTTACAGCATGTAGTCAAAGTGGGAATCTTTCTGCGGGTAAGATGATTCATGGGTTAATTTTAGTTTGTGGATTAGGTTCCCAAGTTGTTTTGACCAATTCCCTTATTGATATGTATTCAAAATGTGGCCAGGTTGATCAGGCAAGGATTTTGTTTGATCATTCTGATAAGTTAGATGGCGTTTCTTGGAATTCGTTGATTGCTGGGTATGTGCAAAATGGAAAATATGAGGAGCTGTTGACAATTCTGCAGAAAATGCATCAATATGGATTGGCGTTCAACACTTTTACTCTAGGAAGTGCTTTGAAGGCTTGTAGCTCAAATTTCAGTGGGTGTAAAATGTTTGGGACAATGCTACATAACCTCGCAATCAAACTCGGCCTACATCTGGATGTTGTTGTTGGCACTGCATTACTTGATATGTATACAAAAACTGGAAGTTTGGGTGATGCTATTCAAATCTTTGACCAAATGGTGGACAAAAATGTTGTGATGTATAATGCAATGATGGCTGGCTTGCTCCAACAAGAGACAATAGAAGATAAATTTGCGTACAAAGCCCTCAATCTTTTCTTTGAGATGAAAAGCTGTGGAATAAAACCTTCCATGTTTACATATTCAAGCTTACTTAAAGCTTGTATTACTGTTGAGGATTTTGAATTTGCAAAGCAAGTTCATGCCTTGATTTGCAAGAATGGCCTTCAATCGGATGAGTACATTGGGAGTGTTCTTATTGATTTGTATTCTTTGTTAGGTTCAATGAAGGATGCTTTATCATGTTTTAATTCAATTCATATTTCGAAGATAGTCCCAATGACTGCCATGATGGTTGGTTATCTTCAAAATGGAGAATTTGAAAGTGCATTGTCTTTGTTCTATGAACTTTTGACATCCGAAGAGAAACCTGATGAGTTTATTTTGTCCACAATCTTGAGTGCTTGTGCAAATATGGGCATGTTAAGATCGGGAGAACAAATCCAGGGGTATGCAACCAAGATAGGCATCTCGAGATTCACCATCTTTCAAAATTCACAGATTTGGATGTATGCTAAGTCTGGAGATCCTTATTCAGCCAATCTAACCTTTCAACAGATGGAAAATCCTAATGCTGTGTCCTGGTCAACAATGATATGCAGCAGTGCACAACATGGGCATGCAGTGGAGGCTATGAGATTTTTTGAGCTGATGAAGAGTTGTGGAATTGAGCCTAACCACTTTGCCTTCCTTGGAGTTCTAATTGCGTGTAGTCACAGAGGGCTCGTTGAAGAAGGATTAAGGTACTTTGATACAATGGAGAAAGATTACAATATGACGATTCATGTCAAGCACTGTGTCTGTGTAGTTGATCTACTTGGTCGAGCTGGAAGGTTGATCGATGCAGAAAGTTTAATTTTGCACTTAGGTTTCAAGCATGAACCAGTGATGTGGCGAGCTTTACTGAGTGCCTGCAGGATTCACAAAGATACATTTACTGCACAACGTGTTGCTCAGAAATTAATAGAGCTTGAACCTCTGGCATCTGCATCTTATGTGCTTCTTTATAATATTTATATGGATGCTGGAAACAAGTCAGATGCCTCTAAAGTTAGGAAGTTAATGGAAGACCGGAGAATTAAGAAAGAACCTGGTCTAAGCTGGATACAAGTTGGAGATAAAGTCTACTCATTTGTTTCGGGTGATCGATCTCACAAAAACAGTGAACTGATTTATGCAAAGTTGGACAAAATGTTAGCAAGGACGAAGAGATTAGATTCGGCGAAGGACACATCTGATTACAAAATTGAGCACGAATACATGACCAACGTGAACTATCACAGTGAAAAGTTGGCTGTGGCTTTTGGGGTTCTCCATTTGTCAGAATCAGCTCCAGTGAGAGTGATGAAGAACCTGAGAATTTGTTTGGACTGTCACATGACAATGAAGCTCTTCTCAATAGTTGAGAAAAGAGAGATAATTCTTAGAGATTCAGTTCGTTTCCATCATTTCAAAGACGGGTCTTGTTCTTGTGGGGACTATTGTAATGCTAGGAAGCACCATTGCAACACTACAATGTTGACATCCAACAGTGTCACTCAACGTTCTAGAGCCCTAAGGCCCACTTTTGCCAACGTCACAATGCTGGTGCCTATTCTTTTAATTTTATATGGAGTTAAAGAGTCTAAGTTTGTGTTGCAGAAGTCAATCAGAATTGACCGAGTCACCACCTCACTGGTCTTTTCTCTTCTCCTCGACGTCTTCGTCTCCGGCCACTGTCGACCTTGTCTCACTCCGGCCACCGTCGACCTCGTATCCTCCGGCCAACGTCAACCTCGTATCCCTCCGGCCCCGTCGATTTCTCCTCAATTCTCACGAGTAACGACTCACACCGTAAAGACTATTTTGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCTGTTCCTAGCTCTGGCAAACAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAACAAGAGAAGAAAGGTGGACGAGCAAACAAGAACAGACCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGACAAGCAATTCAAATCTGACTCCACAAAACGTGTTGATGCGACAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGGTGACATTGTCTTGTTTTTTTCAGCTGAAATTCGAAAGCAAAGGCTTGTTGAAAAATACACGAGTCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAACAAGAGTGA

Protein sequence

MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDYCNARKHHCNTTMLTSNSVTQRSRALRPTFANVTMLVPILLILYGVKESKFVLQKSIRIDRVTTSLVFSLLLDVFVSGHCRPCLTPATVDLVSSGQRQPRIPPAPSISPQFSRVTTHTVKTILANIINLGTGMKKHGSSVPSSGKQIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGTLDVDGFKKRYSFIYENNLPAEKEDKQFKSDSTKRVDATILAKHKKKEREAAKHGKKPFYLKKSGDIVLFFSAEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSSKLDEQE
BLAST of Lsi08G001020 vs. Swiss-Prot
Match: PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 1.6e-203
Identity = 364/690 (52.75%), Postives = 482/690 (69.86%), Query Frame = 1

Query: 36  NILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSA 95
           N  L+S  Y  L Q+A K+G++  GKL H HMI++S  PCL+L NNLLNMYCKC +   A
Sbjct: 42  NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101

Query: 96  DKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 155
            +LFD+M + NII++NSLISGY Q+G +++ M LF +AR   LKLDK+T AGAL  C + 
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161

Query: 156 GNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLI 215
            +L  G+++HGL++V GL  QV L N LIDMYSKCG++DQA  LFD  D+ D VSWNSLI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221

Query: 216 AGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFS-GCKMFGTMLHNLAIKL 275
           +GYV+ G  EE L +L KMH+ GL   T+ LGS LKAC  N + G    G  +H    KL
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281

Query: 276 GLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYK 335
           G+  D+VV TALLDMY K GSL +AI++F  M  KNVV YNAM++G LQ + I D+ + +
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341

Query: 336 ALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLID 395
           A  LF +M+  G++PS  T+S +LKAC   +  E+ +Q+HALICKN  QSDE+IGS LI+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401

Query: 396 LYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFI 455
           LY+L+GS +D + CF S     I   T+M+  ++QN + ESA  LF +L +S  +P+E+ 
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461

Query: 456 LSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQME 515
           +S ++SACA+   L SGEQIQGYA K GI  FT  + S I MYAKSG+   AN  F +++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521

Query: 516 NPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 575
           NP+  ++S MI S AQHG A EA+  FE MK+ GI+PN  AFLGVLIAC H GLV +GL+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581

Query: 576 YFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIH 635
           YF  M+ DY +  + KH  C+VDLLGR GRL DAE+LIL  GF+  PV WRALLS+CR++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641

Query: 636 KDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSW 695
           KD+   +RVA++L+ELEP AS SYVLL+NIY D+G  S A +VR+LM DR +KKEP LSW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701

Query: 696 IQVGDKVYSFVSGDRSHKNSELIYAKLDKM 725
           I +G++ +SF   D SH +S++IY  L+ M
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETM 731

BLAST of Lsi08G001020 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 8.9e-146
Identity = 290/768 (37.76%), Postives = 455/768 (59.24%), Query Frame = 1

Query: 60  GKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQ 119
           G+ +H   I+  F   + +  +L++ Y K  +     K+FD+M + N++T+ +LISGY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171

Query: 120 IGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVL 179
              +D+V+ LF + +  G + + +T A AL   ++ G    G  +H +++  GL   + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231

Query: 180 TNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGL 239
           +NSLI++Y KCG V +ARILFD ++    V+WNS+I+GY  NG   E L +   M    +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291

Query: 240 AFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDA 299
             +  +  S +K C+ N    + F   LH   +K G   D  + TAL+  Y+K  ++ DA
Sbjct: 292 RLSESSFASVIKLCA-NLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351

Query: 300 IQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLL 359
           +++F ++    NVV + AM++G LQ +  E+     A++LF EMK  G++P+ FTYS +L
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEE-----AVDLFSEMKRKGVRPNEFTYSVIL 411

Query: 360 KACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIV 419
            A   +   E    VHA + K   +    +G+ L+D Y  LG +++A   F+ I    IV
Sbjct: 412 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 471

Query: 420 PMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACA-NMGMLRSGEQIQGY 479
             +AM+ GY Q GE E+A+ +F EL     KP+EF  S+IL+ CA     +  G+Q  G+
Sbjct: 472 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 531

Query: 480 ATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEA 539
           A K  +       ++ + MYAK G+  SA   F++    + VSW++MI   AQHG A++A
Sbjct: 532 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 591

Query: 540 MRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVD 599
           +  F+ MK   ++ +   F+GV  AC+H GLVEEG +YFD M +D  +    +H  C+VD
Sbjct: 592 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 651

Query: 600 LLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASAS 659
           L  RAG+L  A  +I ++       +WR +L+ACR+HK T   +  A+K+I ++P  SA+
Sbjct: 652 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 711

Query: 660 YVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELI 719
           YVLL N+Y ++G+  + +KVRKLM +R +KKEPG SWI+V +K YSF++GDRSH   + I
Sbjct: 712 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 771

Query: 720 YAKLDKMLARTKRLDSAKDTS----DYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVR 779
           Y KL+ +  R K L    DTS    D   EH+    +  HSE+LA+AFG++   + +P+ 
Sbjct: 772 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV-LAQHSERLAIAFGLIATPKGSPLL 831

Query: 780 VMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF-KDGSCSCGDY 821
           ++KNLR+C DCH+ +KL + +E+REI++RDS RFHHF  DG CSCGD+
Sbjct: 832 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867

BLAST of Lsi08G001020 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-136
Identity = 289/800 (36.12%), Postives = 445/800 (55.62%), Query Frame = 1

Query: 39  LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
           ++SV +  L++S  +  +   GKLVH+ +I     P   L N+L+++Y K GD+  A+ +
Sbjct: 60  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119

Query: 99  FDKM---SKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 158
           F+ M    K ++++++++++ Y   G     + +F +   LGL  + Y     + ACS S
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179

Query: 159 GNLSAGKMIHGLILVCG-LGSQVVLTNSLIDMYSKC-GQVDQARILFDHSDKLDGVSWNS 218
             +  G++  G ++  G   S V +  SLIDM+ K     + A  +FD   +L+ V+W  
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239

Query: 219 LIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACS--SNFSGCKMFGTMLHNLA 278
           +I   +Q G   E +     M   G   + FTL S   AC+   N S     G  LH+ A
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS----LGKQLHSWA 299

Query: 279 IKLGLHLDVVVGTALLDMYTK---TGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 338
           I+ GL  D  V  +L+DMY K    GS+ D  ++FD+M D +V+ + A++ G ++   + 
Sbjct: 300 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL- 359

Query: 339 DKFAYKALNLFFEMKSCG-IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEY 398
              A +A+NLF EM + G ++P+ FT+SS  KAC  + D    KQV     K GL S+  
Sbjct: 360 ---ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 419

Query: 399 IGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSE 458
           + + +I ++     M+DA   F S+    +V     + G  +N  FE A  L  E+   E
Sbjct: 420 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 479

Query: 459 EKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSAN 518
                F  +++LS  AN+G +R GEQI     K+G+S      N+ I MY+K G   +A+
Sbjct: 480 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 539

Query: 519 LTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRG 578
             F  MEN N +SW++MI   A+HG A+  +  F  M   G++PN   ++ +L ACSH G
Sbjct: 540 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 599

Query: 579 LVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRAL 638
           LV EG R+F++M +D+ +   ++H  C+VDLL RAG L DA   I  + F+ + ++WR  
Sbjct: 600 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 659

Query: 639 LSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIK 698
           L ACR+H +T   +  A+K++EL+P   A+Y+ L NIY  AG   +++++R+ M++R + 
Sbjct: 660 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 719

Query: 699 KEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDT-------SDY 758
           KE G SWI+VGDK++ F  GD +H N+  IY +LD+++   KR     DT        + 
Sbjct: 720 KEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEE 779

Query: 759 KIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREII 818
             E E    +  HSEK+AVAFG++  S+S PVRV KNLR+C DCH  MK  S V  REI+
Sbjct: 780 NDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIV 839

Query: 819 LRDSVRFHHFKDGSCSCGDY 821
           LRD  RFHHFKDG CSC DY
Sbjct: 840 LRDLNRFHHFKDGKCSCNDY 849

BLAST of Lsi08G001020 vs. Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.1e-130
Identity = 273/725 (37.66%), Postives = 406/725 (56.00%), Query Frame = 1

Query: 100 DKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLS 159
           D  S   II  N  +S Y+  G +  ++  F       ++ D+ T    L    +  +L+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332

Query: 160 AGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYV 219
            G+ +H + L  GL   + ++NSLI+MY K  +   AR +FD+  + D +SWNS+IAG  
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392

Query: 220 QNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLD 279
           QNG   E + +  ++ + GL  + +T+ S LKA SS   G  +    +H  AIK+    D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL-SKQVHVHAIKINNVSD 452

Query: 280 VVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLF 339
             V TAL+D Y++   + +A  +F++  + ++V +NAMMAG  Q         +K L LF
Sbjct: 453 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHD-----GHKTLKLF 512

Query: 340 FEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLL 399
             M   G +   FT +++ K C  +      KQVHA   K+G   D ++ S ++D+Y   
Sbjct: 513 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572

Query: 400 GSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTIL 459
           G M  A   F+SI +   V  T M+ G ++NGE E A  +F ++      PDEF ++T+ 
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 632

Query: 460 SACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAV 519
            A + +  L  G QI   A K+  +       S + MYAK G    A   F+++E  N  
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692

Query: 520 SWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 579
           +W+ M+   AQHG   E ++ F+ MKS GI+P+   F+GVL ACSH GLV E  ++  +M
Sbjct: 693 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 752

Query: 580 EKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFT 639
             DY +   ++H  C+ D LGRAG +  AE+LI  +  +    M+R LL+ACR+  DT T
Sbjct: 753 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 812

Query: 640 AQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGD 699
            +RVA KL+ELEPL S++YVLL N+Y  A    +    R +M+  ++KK+PG SWI+V +
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872

Query: 700 KVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKI----EHEYMTNVNYHSE 759
           K++ FV  DRS++ +ELIY K+  M+   K+     +T D+ +    E E    + YHSE
Sbjct: 873 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET-DFTLVDVEEEEKERALYYHSE 932

Query: 760 KLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSC 819
           KLAVAFG+L    S P+RV+KNLR+C DCH  MK  + V  REI+LRD+ RFH FKDG C
Sbjct: 933 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 989

Query: 820 SCGDY 821
           SCGDY
Sbjct: 993 SCGDY 989

BLAST of Lsi08G001020 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-127
Identity = 271/775 (34.97%), Postives = 416/775 (53.68%), Query Frame = 1

Query: 47  LVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPN 106
           ++Q    + +L  GK V + +    F     L + L  MY  CGD   A ++FD++    
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 107 IITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 166
            + +N L++   + G+    + LF K    G+++D YT +    + S   ++  G+ +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219

Query: 167 LILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 226
            IL  G G +  + NSL+  Y K  +VD AR +FD   + D +SWNS+I GYV NG  E+
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 227 LLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTAL 286
            L++  +M   G+  +  T+ S    C+   S     G  +H++ +K     +      L
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDRFCNTL 339

Query: 287 LDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCG 346
           LDMY+K G L  A  +F +M D++VV Y +M+AG  ++       A +A+ LF EM+  G
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----LAGEAVKLFEEMEEEG 399

Query: 347 IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDAL 406
           I P ++T +++L  C      +  K+VH  I +N L  D ++ + L+D+Y+  GSM++A 
Sbjct: 400 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 459

Query: 407 SCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEE-KPDEFILSTILSACANM 466
             F+ + +  I+    ++ GY +N     ALSLF  LL  +   PDE  ++ +L ACA++
Sbjct: 460 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 519

Query: 467 GMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMI 526
                G +I GY  + G        NS + MYAK G    A++ F  + + + VSW+ MI
Sbjct: 520 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 579

Query: 527 CSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNM 586
                HG   EA+  F  M+  GIE +  +F+ +L ACSH GLV+EG R+F+ M  +  +
Sbjct: 580 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 639

Query: 587 TIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQ 646
              V+H  C+VD+L R G LI A   I ++    +  +W ALL  CRIH D   A++VA+
Sbjct: 640 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 699

Query: 647 KLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFV 706
           K+ ELEP  +  YVL+ NIY +A       ++RK +  R ++K PG SWI++  +V  FV
Sbjct: 700 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 759

Query: 707 SGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNVNY---HSEKLAVAFG 766
           +GD S+  +E I A L K+ AR      +  T    I+ E M        HSEKLA+A G
Sbjct: 760 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 819

Query: 767 VLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSC 818
           ++       +RV KNLR+C DCH   K  S + +REI+LRDS RFH FKDG CSC
Sbjct: 820 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867

BLAST of Lsi08G001020 vs. TrEMBL
Match: A0A0A0KSU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648690 PE=4 SV=1)

HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 737/820 (89.88%), Postives = 771/820 (94.02%), Query Frame = 1

Query: 1   MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
           MF  LP S RQ IESFATL  +SLSSSQV PAYS   LLESVDYVKLVQSATKTG LNHG
Sbjct: 19  MFHMLPFSSRQSIESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHG 78

Query: 61  KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
           KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGDT SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79  KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138

Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
            N DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILV GLGSQVVLT
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLT 198

Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
           NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ GLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 258

Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
           FNT+TLGSALKACSSNF+GCKMFGTMLH+ AIKLGLHLDVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 318

Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
           QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378

Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
           CI VEDF+FAKQVHAL+CKNGL SDEYIGS+LIDLYS+LGSM DAL CFNSIH   IVPM
Sbjct: 379 CIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 438

Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
           TAM+ GYLQNGEFESALSLFYELLT EEKPDEFI STI+S+CANMGMLRSGEQIQG+ATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 498

Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
           +GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWSTMICS+AQHGHA+EA+RF
Sbjct: 499 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 558

Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
           FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618

Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
           RAGRL DAESLIL LGF+HEPVMWRALLSACRIHKDT TAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVL 678

Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
           LYNIYMDAGNK  ASKVR LME+RRIKKEPGLSWIQ+GDKVYSFVSGDRSHKNS  IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAK 738

Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
           LD+MLA TKRLDSAKD   YKIEHE++TNVNYHSEKLAVAFGVL+LSESAPVRVMKNLRI
Sbjct: 739 LDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRI 798

Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           CLDCHMTMKLFSIVEKRE+I+RDSVRFHHFKDGSCSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDY 838

BLAST of Lsi08G001020 vs. TrEMBL
Match: M5Y697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017671mg PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 1.4e-275
Identity = 479/758 (63.19%), Postives = 576/758 (75.99%), Query Frame = 1

Query: 67  MIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKV 126
           M++T F+PCLFL NNLLNMYCK G+  SA  LFDKM K N+I+YNSLISGY Q+G  DK 
Sbjct: 1   MVKTCFKPCLFLLNNLLNMYCKRGELDSACNLFDKMPKRNVISYNSLISGYTQVGLFDKA 60

Query: 127 MILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDM 186
           M +FN+AR  GLKLDK+T A AL+ C Q+  +  GK++HGLI++ G GS VVLTNSL+DM
Sbjct: 61  MGVFNEARVTGLKLDKFTYASALSVCGQTCYIELGKLVHGLIVLSGSGSDVVLTNSLMDM 120

Query: 187 YSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTL 246
           YSKCG VD A+ILF++SD LD VSWNSLIA Y + G  EE L  L KMHQ G + NT+TL
Sbjct: 121 YSKCGWVDHAKILFENSDNLDDVSWNSLIASYARIGANEETLRTLVKMHQCGFSLNTYTL 180

Query: 247 GSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQM 306
           GSALKAC   F   ++FG +LH   +KLGL LDVVVGTALLDMY KTG LGDAIQIF  M
Sbjct: 181 GSALKACCKIFDNSELFGKLLHGYTVKLGLDLDVVVGTALLDMYAKTGDLGDAIQIFKVM 240

Query: 307 VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVED 366
             +NVVMYNAM+AG LQ +T   + A +  NL  +M+  G+KPS FT+S +L+AC +VE 
Sbjct: 241 PYRNVVMYNAMIAGFLQIDTFSYEHANEVFNLLSQMQRLGVKPSTFTFSIILRACKSVEA 300

Query: 367 FEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVG 426
           FE+ KQVH  +CK  LQ DE+IGS LID YS LG  +DAL CFN      IV  T+M+ G
Sbjct: 301 FEYGKQVHTQVCKYNLQGDEFIGSGLIDFYSSLGLFEDALKCFNLTPRLDIVSWTSMVAG 360

Query: 427 YLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRF 486
           Y+QNGE ESA  LFYELL S +KPDEFI+S++L ACAN+   RSGEQIQGYA K G+ +F
Sbjct: 361 YIQNGETESAFDLFYELLASGKKPDEFIISSMLGACANLAAARSGEQIQGYAVKAGVGKF 420

Query: 487 TIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKS 546
           TI QNSQI MYAKSGD  SANLTF + ENP+ VSWS MICS AQHG A EA+  FELMK+
Sbjct: 421 TIVQNSQICMYAKSGDIDSANLTFTETENPDVVSWSVMICSKAQHGCAREALELFELMKN 480

Query: 547 CGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLI 606
           CGI PNH  FLGVL ACSH GLVEEGLRYF+ M+ DY MT +V+HC C VDLLGRAGRL+
Sbjct: 481 CGIAPNHITFLGVLTACSHGGLVEEGLRYFEIMKNDYGMTTNVQHCACAVDLLGRAGRLV 540

Query: 607 DAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYM 666
           DAE+ I + GF+  PVMWRALLSACR++KDT  A+RVA+KLI LEP A+ASYVLLYNIY 
Sbjct: 541 DAENFIFNSGFEDNPVMWRALLSACRVYKDTVAAKRVAEKLINLEPQAAASYVLLYNIYN 600

Query: 667 DAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLA 726
           DAG +  A K+R+LM DR +KKEPGLSWI+VG++V+SFVSGD+SH+  +LIYA+L++ML 
Sbjct: 601 DAGIELPAKKIRELMTDRGVKKEPGLSWIEVGNEVHSFVSGDQSHQMIQLIYARLEEMLG 660

Query: 727 RTKR----LDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICL 786
           + K+    + S  +  D K+       V YHSE LAV FG++ L +SAPVRVMKNLR+C 
Sbjct: 661 KMKKIGCMITSGPEIKDRKV-------VYYHSENLAVTFGIISLPQSAPVRVMKNLRVCS 720

Query: 787 DCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           DCH TMK FS VEKREIILRD +RFHHF+DG+CSC DY
Sbjct: 721 DCHTTMKFFSEVEKREIILRDPIRFHHFRDGACSCRDY 751

BLAST of Lsi08G001020 vs. TrEMBL
Match: B9S753_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1333850 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.0e-273
Identity = 474/790 (60.00%), Postives = 601/790 (76.08%), Query Frame = 1

Query: 39  LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
           L+SV Y KLVQ ++K+G+  HGKL H+HMI+T+F PCLFL NN LN+Y K G+  +A KL
Sbjct: 7   LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66

Query: 99  FDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNL 158
           FD+MS+ ++I+YN LISGY  +G + K + LF++AR   LKLDK++ AG L+AC Q  + 
Sbjct: 67  FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 159 SAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGY 218
           + GK+IHGL +VCGLG QV LTN LIDMY KC ++D AR+LF+ SD+LD VSWNSLI GY
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186

Query: 219 VQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHL 278
            + G YEE+L +L KMH  GL  N FTLGSALK+C  N +    +G  LH   +K GL L
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDL 246

Query: 279 DVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNL 338
           D+VVGTALLDMY KTG LGDAIQ+F    ++NVVMYNAM+AG +Q E I+ + AY+AL L
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKL 306

Query: 339 FFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSL 398
           F +M+  GIKPS FT+SS++K C  +E FE+ KQ+HA ICK+ +QSDE+IGS LI+LYSL
Sbjct: 307 FSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSL 366

Query: 399 LGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTI 458
           LGS +D L CFNS     IV  T M+ GY QNG+FESAL+LFYELL S +KPDEFI++T+
Sbjct: 367 LGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTM 426

Query: 459 LSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNA 518
           LSACA++   RSGEQ+ GYA K GI    I QNSQI MYAKSG+  SA +TF++++NP+ 
Sbjct: 427 LSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDV 486

Query: 519 VSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDT 578
           VSWS MICS+AQHGHA +A+  FELMKS GI PN   FLGVL ACSH GLVEEGLRY+++
Sbjct: 487 VSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYES 546

Query: 579 MEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTF 638
           M+KDY+M I+VKHC C+VDLL RAGRL+DA++ IL+ GF   PVMWR LLS CRI+KD  
Sbjct: 547 MKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIV 606

Query: 639 TAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVG 698
           T + VA+KLIEL+P  S+SYVLLYNIY DAG    A+K+R+LM+DR I+KEPG SWI+VG
Sbjct: 607 TGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVG 666

Query: 699 DKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMT--------NV 758
           ++V+SFV GD SH  S++IY KL+ ML + +++       D KI++  ++         V
Sbjct: 667 NEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYI----DQKIQNVTISTKEVKGTLGV 726

Query: 759 NYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF 818
           N+HSEKLAV+FG++ L  SAPV+VMKNLR+C DCH TMKL S+VEKREIILRDS+RFHHF
Sbjct: 727 NHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHF 786

Query: 819 KDGSCSCGDY 821
           K+GSCSC DY
Sbjct: 787 KEGSCSCNDY 792

BLAST of Lsi08G001020 vs. TrEMBL
Match: F6I3W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01110 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 9.2e-267
Identity = 465/760 (61.18%), Postives = 586/760 (77.11%), Query Frame = 1

Query: 66  HMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDK 125
           HMI+T F+PCLFL NNLL MYCKCG+T  A KLFD+M K N++++NSLISGY Q+G + +
Sbjct: 2   HMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHE 61

Query: 126 VMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLID 185
           VM LF +AR   L+LDK+T + AL+ C ++ +L  G++IH LI V GLG  V+LTNSLID
Sbjct: 62  VMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLID 121

Query: 186 MYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFT 245
           MY KCG++D AR++F+ +D+LD VSWNSLIAGYV+ G  +E+L +L KM ++GL  N++ 
Sbjct: 122 MYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYA 181

Query: 246 LGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQ 305
           LGSALKAC SNFS     G MLH  A+KLGL LDVVVGTALLD Y K G L DA +IF  
Sbjct: 182 LGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKL 241

Query: 306 MVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVE 365
           M D NVVMYNAM+AG LQ ET+ D+FA +A+ LFFEM+S G+KPS FT+SS+LKAC T+E
Sbjct: 242 MPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIE 301

Query: 366 DFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMV 425
            FE  KQ+HA I K  LQSDE+IG+ L++LYSL GS++D L CF+S     +V  T+++V
Sbjct: 302 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 361

Query: 426 GYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISR 485
           G++QNG+FE  L+LF+ELL S  KPDEF +S +LSACAN+  ++SGEQI  YA K GI  
Sbjct: 362 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 421

Query: 486 FTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMK 545
           FTI QNSQI MYAK GD  SAN+TF++ +NP+ VSWS MI S+AQHG A EA+  FELMK
Sbjct: 422 FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMK 481

Query: 546 SCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRL 605
             GI PNH  FLGVL+ACSH GLVEEGLRYF+ M+KD+ +T +VKH  C+VDLLGRAGRL
Sbjct: 482 GSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 541

Query: 606 IDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIY 665
            +AES I+  GF+ +PVMWR+LLSACR+HK T T +RVA+++IELEP A+ASYVLLYNIY
Sbjct: 542 AEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIY 601

Query: 666 MDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKML 725
            DAG +  A+++R LM+DR +KKEPGLSWI+VG+ V+SFV+GDRSH NS++IY +L++ML
Sbjct: 602 NDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEML 661

Query: 726 ARTKRLD-----SAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 785
              K+LD        D S+ K  H+  + V+YHSEKLAV FG++ L  SAPVRVMKNLR 
Sbjct: 662 EEIKKLDYIDEKLVSDASEPK--HKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRS 721

Query: 786 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           C  CH TMKLFS +E REIILRD +RFH F+DGSCSCGDY
Sbjct: 722 CWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDY 759

BLAST of Lsi08G001020 vs. TrEMBL
Match: A0A118JTP6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007343 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 1.7e-249
Identity = 436/790 (55.19%), Postives = 570/790 (72.15%), Query Frame = 1

Query: 31  PAYSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCG 90
           P   L   L+ V Y KLVQS+   G   HGKLV SHM++T + P LFL N LLNMY KC 
Sbjct: 45  PPCELGNSLDDVTYTKLVQSSMHLGCSVHGKLVQSHMVKTGYNPGLFLHNTLLNMYLKCN 104

Query: 91  DTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALT 150
           ++  A +LFD+M++ N++++NSLISGY ++G +     +F KAR   + ++K+T A  L+
Sbjct: 105 ESDMALQLFDEMAERNVVSWNSLISGYTRLGLYSNAKEIFCKARIANIDINKFTFASMLS 164

Query: 151 ACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVS 210
            C+Q+ +L  GK++HGL++  G+G    LTN L+ MYSKCG+VDQAR+ FD  D LD VS
Sbjct: 165 ICAQTSDLKLGKVVHGLLMSSGIGVAAFLTNPLVAMYSKCGRVDQARVAFDQCDGLDDVS 224

Query: 211 WNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNL 270
           WNS+IAGYV+ G ++E+L +L KMH+YG+ F+++ LGS L AC  NF    ++G +LH+ 
Sbjct: 225 WNSMIAGYVKAGLHDEMLQVLVKMHRYGVRFSSYVLGSVLSACCLNFDRSLVWGKLLHSC 284

Query: 271 AIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 330
           ++KLG  LDVVVGTALLDMY K G L DA+  F  + DKNVVMYNAM++GLL+ E   D+
Sbjct: 285 SVKLGWDLDVVVGTALLDMYAKIGDLDDAVSTFSVLNDKNVVMYNAMISGLLRGEENSDE 344

Query: 331 FAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGS 390
           +A KALNLF EM+  G++PS FT+S+++KACI  +DFE+ KQ+H L+CKN LQSDEYIGS
Sbjct: 345 YAKKALNLFAEMQRHGLRPSEFTFSTIIKACIACKDFEYGKQIHGLVCKNNLQSDEYIGS 404

Query: 391 VLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKP 450
           +L+++YS+  S  DALSCF+S     IV  T+M+VG+ QNGE+E AL LF +LL+S  KP
Sbjct: 405 MLVEMYSMWSSTDDALSCFDSTCKQDIVIWTSMIVGHAQNGEYERALVLFCKLLSSGLKP 464

Query: 451 DEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTF 510
           DEF +ST+LSACAN+   RSGEQIQ Y+ K GI    + +NS I+MYAKSGD  SAN TF
Sbjct: 465 DEFTISTMLSACANLAAARSGEQIQSYSIKTGIIESGVVRNSLIYMYAKSGDIDSANQTF 524

Query: 511 QQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 570
           +  +  + VSWS MICS+A HG A EA+  FELM S GI PN  AFLGVL ACSH GLVE
Sbjct: 525 KAADKSDVVSWSVMICSTAHHGCAKEALSLFELMISSGIAPNDVAFLGVLTACSHGGLVE 584

Query: 571 EGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSA 630
           EGLR       D+ +    KHC C+ DL GRAGRL DA++ I+  GF H P+MWR LLS+
Sbjct: 585 EGLR-------DHGIAPTEKHCACIADLYGRAGRLSDAKTFIMDSGFSHAPIMWRTLLSS 644

Query: 631 CRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEP 690
           CRIHK+T   + VA++LIELEP AS+SYVLLYNIY DA  +  A+++R LM +RRIKKEP
Sbjct: 645 CRIHKNTEIGKHVAKRLIELEPQASSSYVLLYNIYNDARMEEAATEIRDLMSNRRIKKEP 704

Query: 691 GLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNV 750
           GLSWI+VG++V SF+ GD+ H  SE IYAKLD +L   K++          ++      V
Sbjct: 705 GLSWIEVGNRVNSFLVGDKCHPQSEKIYAKLDDLLQEIKKIG--------YVDELEKDEV 764

Query: 751 NYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF 810
           N+HSEKLAV+FG++ L+ SAP+RVMKNLR+C DCH  +KL S VEKREI++RD +RFH F
Sbjct: 765 NHHSEKLAVSFGLIGLAPSAPLRVMKNLRVCRDCHTVIKLISKVEKREIVVRDPIRFHRF 819

Query: 811 KDGSCSCGDY 821
           +DGSCSCGDY
Sbjct: 825 RDGSCSCGDY 819

BLAST of Lsi08G001020 vs. TAIR10
Match: AT3G13880.1 (AT3G13880.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 711.4 bits (1835), Expect = 9.0e-205
Identity = 364/690 (52.75%), Postives = 482/690 (69.86%), Query Frame = 1

Query: 36  NILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSA 95
           N  L+S  Y  L Q+A K+G++  GKL H HMI++S  PCL+L NNLLNMYCKC +   A
Sbjct: 42  NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101

Query: 96  DKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 155
            +LFD+M + NII++NSLISGY Q+G +++ M LF +AR   LKLDK+T AGAL  C + 
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161

Query: 156 GNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLI 215
            +L  G+++HGL++V GL  QV L N LIDMYSKCG++DQA  LFD  D+ D VSWNSLI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221

Query: 216 AGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFS-GCKMFGTMLHNLAIKL 275
           +GYV+ G  EE L +L KMH+ GL   T+ LGS LKAC  N + G    G  +H    KL
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281

Query: 276 GLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYK 335
           G+  D+VV TALLDMY K GSL +AI++F  M  KNVV YNAM++G LQ + I D+ + +
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341

Query: 336 ALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLID 395
           A  LF +M+  G++PS  T+S +LKAC   +  E+ +Q+HALICKN  QSDE+IGS LI+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401

Query: 396 LYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFI 455
           LY+L+GS +D + CF S     I   T+M+  ++QN + ESA  LF +L +S  +P+E+ 
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461

Query: 456 LSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQME 515
           +S ++SACA+   L SGEQIQGYA K GI  FT  + S I MYAKSG+   AN  F +++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521

Query: 516 NPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 575
           NP+  ++S MI S AQHG A EA+  FE MK+ GI+PN  AFLGVLIAC H GLV +GL+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581

Query: 576 YFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIH 635
           YF  M+ DY +  + KH  C+VDLLGR GRL DAE+LIL  GF+  PV WRALLS+CR++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641

Query: 636 KDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSW 695
           KD+   +RVA++L+ELEP AS SYVLL+NIY D+G  S A +VR+LM DR +KKEP LSW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701

Query: 696 IQVGDKVYSFVSGDRSHKNSELIYAKLDKM 725
           I +G++ +SF   D SH +S++IY  L+ M
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETM 731

BLAST of Lsi08G001020 vs. TAIR10
Match: AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 519.6 bits (1337), Expect = 5.0e-147
Identity = 290/768 (37.76%), Postives = 455/768 (59.24%), Query Frame = 1

Query: 60  GKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQ 119
           G+ +H   I+  F   + +  +L++ Y K  +     K+FD+M + N++T+ +LISGY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171

Query: 120 IGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVL 179
              +D+V+ LF + +  G + + +T A AL   ++ G    G  +H +++  GL   + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231

Query: 180 TNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGL 239
           +NSLI++Y KCG V +ARILFD ++    V+WNS+I+GY  NG   E L +   M    +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291

Query: 240 AFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDA 299
             +  +  S +K C+ N    + F   LH   +K G   D  + TAL+  Y+K  ++ DA
Sbjct: 292 RLSESSFASVIKLCA-NLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351

Query: 300 IQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLL 359
           +++F ++    NVV + AM++G LQ +  E+     A++LF EMK  G++P+ FTYS +L
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEE-----AVDLFSEMKRKGVRPNEFTYSVIL 411

Query: 360 KACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIV 419
            A   +   E    VHA + K   +    +G+ L+D Y  LG +++A   F+ I    IV
Sbjct: 412 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 471

Query: 420 PMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACA-NMGMLRSGEQIQGY 479
             +AM+ GY Q GE E+A+ +F EL     KP+EF  S+IL+ CA     +  G+Q  G+
Sbjct: 472 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 531

Query: 480 ATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEA 539
           A K  +       ++ + MYAK G+  SA   F++    + VSW++MI   AQHG A++A
Sbjct: 532 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 591

Query: 540 MRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVD 599
           +  F+ MK   ++ +   F+GV  AC+H GLVEEG +YFD M +D  +    +H  C+VD
Sbjct: 592 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 651

Query: 600 LLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASAS 659
           L  RAG+L  A  +I ++       +WR +L+ACR+HK T   +  A+K+I ++P  SA+
Sbjct: 652 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 711

Query: 660 YVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELI 719
           YVLL N+Y ++G+  + +KVRKLM +R +KKEPG SWI+V +K YSF++GDRSH   + I
Sbjct: 712 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 771

Query: 720 YAKLDKMLARTKRLDSAKDTS----DYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVR 779
           Y KL+ +  R K L    DTS    D   EH+    +  HSE+LA+AFG++   + +P+ 
Sbjct: 772 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV-LAQHSERLAIAFGLIATPKGSPLL 831

Query: 780 VMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF-KDGSCSCGDY 821
           ++KNLR+C DCH+ +KL + +E+REI++RDS RFHHF  DG CSCGD+
Sbjct: 832 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867

BLAST of Lsi08G001020 vs. TAIR10
Match: AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 488.8 bits (1257), Expect = 9.5e-138
Identity = 289/800 (36.12%), Postives = 445/800 (55.62%), Query Frame = 1

Query: 39  LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
           ++SV +  L++S  +  +   GKLVH+ +I     P   L N+L+++Y K GD+  A+ +
Sbjct: 60  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119

Query: 99  FDKM---SKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 158
           F+ M    K ++++++++++ Y   G     + +F +   LGL  + Y     + ACS S
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179

Query: 159 GNLSAGKMIHGLILVCG-LGSQVVLTNSLIDMYSKC-GQVDQARILFDHSDKLDGVSWNS 218
             +  G++  G ++  G   S V +  SLIDM+ K     + A  +FD   +L+ V+W  
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239

Query: 219 LIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACS--SNFSGCKMFGTMLHNLA 278
           +I   +Q G   E +     M   G   + FTL S   AC+   N S     G  LH+ A
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS----LGKQLHSWA 299

Query: 279 IKLGLHLDVVVGTALLDMYTK---TGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 338
           I+ GL  D  V  +L+DMY K    GS+ D  ++FD+M D +V+ + A++ G ++   + 
Sbjct: 300 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL- 359

Query: 339 DKFAYKALNLFFEMKSCG-IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEY 398
              A +A+NLF EM + G ++P+ FT+SS  KAC  + D    KQV     K GL S+  
Sbjct: 360 ---ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 419

Query: 399 IGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSE 458
           + + +I ++     M+DA   F S+    +V     + G  +N  FE A  L  E+   E
Sbjct: 420 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 479

Query: 459 EKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSAN 518
                F  +++LS  AN+G +R GEQI     K+G+S      N+ I MY+K G   +A+
Sbjct: 480 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 539

Query: 519 LTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRG 578
             F  MEN N +SW++MI   A+HG A+  +  F  M   G++PN   ++ +L ACSH G
Sbjct: 540 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 599

Query: 579 LVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRAL 638
           LV EG R+F++M +D+ +   ++H  C+VDLL RAG L DA   I  + F+ + ++WR  
Sbjct: 600 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 659

Query: 639 LSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIK 698
           L ACR+H +T   +  A+K++EL+P   A+Y+ L NIY  AG   +++++R+ M++R + 
Sbjct: 660 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 719

Query: 699 KEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDT-------SDY 758
           KE G SWI+VGDK++ F  GD +H N+  IY +LD+++   KR     DT        + 
Sbjct: 720 KEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEE 779

Query: 759 KIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREII 818
             E E    +  HSEK+AVAFG++  S+S PVRV KNLR+C DCH  MK  S V  REI+
Sbjct: 780 NDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIV 839

Query: 819 LRDSVRFHHFKDGSCSCGDY 821
           LRD  RFHHFKDG CSC DY
Sbjct: 840 LRDLNRFHHFKDGKCSCNDY 849

BLAST of Lsi08G001020 vs. TAIR10
Match: AT4G33170.1 (AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 468.0 bits (1203), Expect = 1.7e-131
Identity = 273/725 (37.66%), Postives = 406/725 (56.00%), Query Frame = 1

Query: 100 DKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLS 159
           D  S   II  N  +S Y+  G +  ++  F       ++ D+ T    L    +  +L+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332

Query: 160 AGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYV 219
            G+ +H + L  GL   + ++NSLI+MY K  +   AR +FD+  + D +SWNS+IAG  
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392

Query: 220 QNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLD 279
           QNG   E + +  ++ + GL  + +T+ S LKA SS   G  +    +H  AIK+    D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL-SKQVHVHAIKINNVSD 452

Query: 280 VVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLF 339
             V TAL+D Y++   + +A  +F++  + ++V +NAMMAG  Q         +K L LF
Sbjct: 453 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHD-----GHKTLKLF 512

Query: 340 FEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLL 399
             M   G +   FT +++ K C  +      KQVHA   K+G   D ++ S ++D+Y   
Sbjct: 513 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572

Query: 400 GSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTIL 459
           G M  A   F+SI +   V  T M+ G ++NGE E A  +F ++      PDEF ++T+ 
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 632

Query: 460 SACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAV 519
            A + +  L  G QI   A K+  +       S + MYAK G    A   F+++E  N  
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692

Query: 520 SWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 579
           +W+ M+   AQHG   E ++ F+ MKS GI+P+   F+GVL ACSH GLV E  ++  +M
Sbjct: 693 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 752

Query: 580 EKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFT 639
             DY +   ++H  C+ D LGRAG +  AE+LI  +  +    M+R LL+ACR+  DT T
Sbjct: 753 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 812

Query: 640 AQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGD 699
            +RVA KL+ELEPL S++YVLL N+Y  A    +    R +M+  ++KK+PG SWI+V +
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872

Query: 700 KVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKI----EHEYMTNVNYHSE 759
           K++ FV  DRS++ +ELIY K+  M+   K+     +T D+ +    E E    + YHSE
Sbjct: 873 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET-DFTLVDVEEEEKERALYYHSE 932

Query: 760 KLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSC 819
           KLAVAFG+L    S P+RV+KNLR+C DCH  MK  + V  REI+LRD+ RFH FKDG C
Sbjct: 933 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 989

Query: 820 SCGDY 821
           SCGDY
Sbjct: 993 SCGDY 989

BLAST of Lsi08G001020 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 459.1 bits (1180), Expect = 8.0e-129
Identity = 271/775 (34.97%), Postives = 416/775 (53.68%), Query Frame = 1

Query: 47  LVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPN 106
           ++Q    + +L  GK V + +    F     L + L  MY  CGD   A ++FD++    
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 107 IITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 166
            + +N L++   + G+    + LF K    G+++D YT +    + S   ++  G+ +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219

Query: 167 LILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 226
            IL  G G +  + NSL+  Y K  +VD AR +FD   + D +SWNS+I GYV NG  E+
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 227 LLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTAL 286
            L++  +M   G+  +  T+ S    C+   S     G  +H++ +K     +      L
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDRFCNTL 339

Query: 287 LDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCG 346
           LDMY+K G L  A  +F +M D++VV Y +M+AG  ++       A +A+ LF EM+  G
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----LAGEAVKLFEEMEEEG 399

Query: 347 IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDAL 406
           I P ++T +++L  C      +  K+VH  I +N L  D ++ + L+D+Y+  GSM++A 
Sbjct: 400 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 459

Query: 407 SCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEE-KPDEFILSTILSACANM 466
             F+ + +  I+    ++ GY +N     ALSLF  LL  +   PDE  ++ +L ACA++
Sbjct: 460 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 519

Query: 467 GMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMI 526
                G +I GY  + G        NS + MYAK G    A++ F  + + + VSW+ MI
Sbjct: 520 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 579

Query: 527 CSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNM 586
                HG   EA+  F  M+  GIE +  +F+ +L ACSH GLV+EG R+F+ M  +  +
Sbjct: 580 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 639

Query: 587 TIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQ 646
              V+H  C+VD+L R G LI A   I ++    +  +W ALL  CRIH D   A++VA+
Sbjct: 640 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 699

Query: 647 KLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFV 706
           K+ ELEP  +  YVL+ NIY +A       ++RK +  R ++K PG SWI++  +V  FV
Sbjct: 700 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 759

Query: 707 SGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNVNY---HSEKLAVAFG 766
           +GD S+  +E I A L K+ AR      +  T    I+ E M        HSEKLA+A G
Sbjct: 760 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 819

Query: 767 VLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSC 818
           ++       +RV KNLR+C DCH   K  S + +REI+LRDS RFH FKDG CSC
Sbjct: 820 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867

BLAST of Lsi08G001020 vs. NCBI nr
Match: gi|659119276|ref|XP_008459568.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X1 [Cucumis melo])

HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 736/820 (89.76%), Postives = 772/820 (94.15%), Query Frame = 1

Query: 1   MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
           MF  LP   R+ IESFATLE +SLSSSQV PAYS   LLESVDYVKLVQSATKTGNLN G
Sbjct: 19  MFHMLPFFSRESIESFATLESVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGNLNQG 78

Query: 61  KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
           KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGD  SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79  KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDIRSADKLFDKMSKSNIVTYNSLISGYVQM 138

Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
              DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNL AGKMIHGLILV GLGSQVVLT
Sbjct: 139 STLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLFAGKMIHGLILVYGLGSQVVLT 198

Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
           NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELL ILQKMHQYGLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLPILQKMHQYGLA 258

Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
           FNT+TLGSALKACSSNF+GCKMFGTMLH+LAIKLGLH DVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDLAIKLGLHRDVVVGTALLDMYAKTGSLDDAI 318

Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
           QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378

Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
           CITV+DFEFAKQVHAL+CKNGL +DEYIGS LIDLYSLLGSM DALSCFNSIH   IVPM
Sbjct: 379 CITVKDFEFAKQVHALMCKNGLLADEYIGSSLIDLYSLLGSMTDALSCFNSIHNLTIVPM 438

Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
           TAM+ GYLQNGEFESALSLFYELLT EEKPDEFILSTI+S+CANMGMLRSGEQIQGYATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFILSTIMSSCANMGMLRSGEQIQGYATK 498

Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
            GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWST ICS+AQHGHA++A+R+
Sbjct: 499 TGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDTVSWSTTICSNAQHGHAMDALRY 558

Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
           FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618

Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
           RAGRL+DAESLIL LGF+HEPVMWRALLSACRIHKDTFTAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLVDAESLILRLGFEHEPVMWRALLSACRIHKDTFTAQRVAQKVIELEPLASASYVL 678

Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
           LYNIYMDAGNK  ASKVRKLMED++IKKEPGLSWIQ+G+KVYSFVSGDRSH+NSE IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRKLMEDQKIKKEPGLSWIQIGNKVYSFVSGDRSHENSERIYAK 738

Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
           LD+MLARTKRLDSAKD   YKIEHEY+TNVNYHSEKLAVAFGVLHL+ESAPVRVMKNLRI
Sbjct: 739 LDEMLARTKRLDSAKDALGYKIEHEYLTNVNYHSEKLAVAFGVLHLAESAPVRVMKNLRI 798

Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           CLDCHMTMKLFSIVEKRE+ILRDSVRFHHFKDG CSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELILRDSVRFHHFKDGLCSCGDY 838

BLAST of Lsi08G001020 vs. NCBI nr
Match: gi|778707858|ref|XP_004141630.2| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Cucumis sativus])

HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 737/820 (89.88%), Postives = 771/820 (94.02%), Query Frame = 1

Query: 1   MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
           MF  LP S RQ IESFATL  +SLSSSQV PAYS   LLESVDYVKLVQSATKTG LNHG
Sbjct: 19  MFHMLPFSSRQSIESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHG 78

Query: 61  KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
           KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGDT SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79  KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138

Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
            N DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILV GLGSQVVLT
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLT 198

Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
           NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ GLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 258

Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
           FNT+TLGSALKACSSNF+GCKMFGTMLH+ AIKLGLHLDVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 318

Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
           QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378

Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
           CI VEDF+FAKQVHAL+CKNGL SDEYIGS+LIDLYS+LGSM DAL CFNSIH   IVPM
Sbjct: 379 CIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 438

Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
           TAM+ GYLQNGEFESALSLFYELLT EEKPDEFI STI+S+CANMGMLRSGEQIQG+ATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 498

Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
           +GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWSTMICS+AQHGHA+EA+RF
Sbjct: 499 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 558

Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
           FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618

Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
           RAGRL DAESLIL LGF+HEPVMWRALLSACRIHKDT TAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVL 678

Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
           LYNIYMDAGNK  ASKVR LME+RRIKKEPGLSWIQ+GDKVYSFVSGDRSHKNS  IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAK 738

Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
           LD+MLA TKRLDSAKD   YKIEHE++TNVNYHSEKLAVAFGVL+LSESAPVRVMKNLRI
Sbjct: 739 LDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRI 798

Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           CLDCHMTMKLFSIVEKRE+I+RDSVRFHHFKDGSCSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDY 838

BLAST of Lsi08G001020 vs. NCBI nr
Match: gi|659119278|ref|XP_008459569.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Cucumis melo])

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 637/697 (91.39%), Postives = 667/697 (95.70%), Query Frame = 1

Query: 124 DKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSL 183
           DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNL AGKMIHGLILV GLGSQVVLTNSL
Sbjct: 5   DKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLFAGKMIHGLILVYGLGSQVVLTNSL 64

Query: 184 IDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNT 243
           IDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELL ILQKMHQYGLAFNT
Sbjct: 65  IDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLPILQKMHQYGLAFNT 124

Query: 244 FTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIF 303
           +TLGSALKACSSNF+GCKMFGTMLH+LAIKLGLH DVVVGTALLDMY KTGSL DAIQIF
Sbjct: 125 YTLGSALKACSSNFNGCKMFGTMLHDLAIKLGLHRDVVVGTALLDMYAKTGSLDDAIQIF 184

Query: 304 DQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACIT 363
           DQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKACIT
Sbjct: 185 DQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIT 244

Query: 364 VEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAM 423
           V+DFEFAKQVHAL+CKNGL +DEYIGS LIDLYSLLGSM DALSCFNSIH   IVPMTAM
Sbjct: 245 VKDFEFAKQVHALMCKNGLLADEYIGSSLIDLYSLLGSMTDALSCFNSIHNLTIVPMTAM 304

Query: 424 MVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGI 483
           + GYLQNGEFESALSLFYELLT EEKPDEFILSTI+S+CANMGMLRSGEQIQGYATK GI
Sbjct: 305 IFGYLQNGEFESALSLFYELLTYEEKPDEFILSTIMSSCANMGMLRSGEQIQGYATKTGI 364

Query: 484 SRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFEL 543
           SRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWST ICS+AQHGHA++A+R+FEL
Sbjct: 365 SRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDTVSWSTTICSNAQHGHAMDALRYFEL 424

Query: 544 MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAG 603
           MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLGRAG
Sbjct: 425 MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAG 484

Query: 604 RLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYN 663
           RL+DAESLIL LGF+HEPVMWRALLSACRIHKDTFTAQRVAQK+IELEPLASASYVLLYN
Sbjct: 485 RLVDAESLILRLGFEHEPVMWRALLSACRIHKDTFTAQRVAQKVIELEPLASASYVLLYN 544

Query: 664 IYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDK 723
           IYMDAGNK  ASKVRKLMED++IKKEPGLSWIQ+G+KVYSFVSGDRSH+NSE IYAKLD+
Sbjct: 545 IYMDAGNKLAASKVRKLMEDQKIKKEPGLSWIQIGNKVYSFVSGDRSHENSERIYAKLDE 604

Query: 724 MLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLD 783
           MLARTKRLDSAKD   YKIEHEY+TNVNYHSEKLAVAFGVLHL+ESAPVRVMKNLRICLD
Sbjct: 605 MLARTKRLDSAKDALGYKIEHEYLTNVNYHSEKLAVAFGVLHLAESAPVRVMKNLRICLD 664

Query: 784 CHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           CHMTMKLFSIVEKRE+ILRDSVRFHHFKDG CSCGDY
Sbjct: 665 CHMTMKLFSIVEKRELILRDSVRFHHFKDGLCSCGDY 701

BLAST of Lsi08G001020 vs. NCBI nr
Match: gi|645224258|ref|XP_008219023.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Prunus mume])

HSP 1 Score: 1003.8 bits (2594), Expect = 2.5e-289
Identity = 506/814 (62.16%), Postives = 610/814 (74.94%), Query Frame = 1

Query: 11  QPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRT 70
           QP  S   L   +  S Q S     N  L++V Y KL+Q +TKTG+L HGKL H HM++T
Sbjct: 29  QPNNSHPMLPQTTPLSQQSSQHCHPNYSLDNVTYTKLIQYSTKTGSLVHGKLAHVHMVKT 88

Query: 71  SFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILF 130
            F+PCLFL NNLLNMYCK G+  SA  LFDKM K N+I+YNSLISGY Q+G  DK M +F
Sbjct: 89  CFKPCLFLLNNLLNMYCKRGELDSACNLFDKMPKRNVISYNSLISGYTQVGLFDKAMGVF 148

Query: 131 NKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKC 190
           N+AR  GLKLDK+T AGAL  C Q+ ++  GK++HGLI++ GLGS VVLTNSL+DMYSKC
Sbjct: 149 NEARMAGLKLDKFTYAGALCVCGQTCDVELGKLVHGLIVLSGLGSDVVLTNSLMDMYSKC 208

Query: 191 GQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSAL 250
           G+VD A+ILF++SD LD VSWNSLIA Y + G  EE L  L KMHQ G + NT+TLGSAL
Sbjct: 209 GRVDHAKILFENSDNLDDVSWNSLIASYARIGANEETLRTLVKMHQRGFSLNTYTLGSAL 268

Query: 251 KACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKN 310
           KAC  NF   ++FG +LH   +KLGL LDVVVGTALLDMY KTG LGDAIQIF  M  +N
Sbjct: 269 KACCKNFDNSELFGKLLHGYMVKLGLDLDVVVGTALLDMYAKTGDLGDAIQIFKVMPYRN 328

Query: 311 VVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFA 370
           VVMYNAM+AG LQ +T   + A +  NL  +M+  G+KPS FT+S +L+AC +VE FE+ 
Sbjct: 329 VVMYNAMIAGFLQIDTFSYEHAKEVFNLLSQMQRLGVKPSTFTFSIILRACKSVEAFEYG 388

Query: 371 KQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQN 430
           KQVH  +CK  LQ DE+IGS LID Y  LG  +DAL CFN      IV  T+M+ GY+QN
Sbjct: 389 KQVHTQVCKYNLQGDEFIGSGLIDFYFSLGLFEDALKCFNLTPRLDIVSWTSMVAGYIQN 448

Query: 431 GEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQ 490
           GE ESA  LFY+LL S +KPDEFI+S++L ACAN+   RSGEQIQGYA K G+ +FTI Q
Sbjct: 449 GETESAFDLFYKLLASGKKPDEFIISSMLGACANLAAARSGEQIQGYAVKAGVGKFTIVQ 508

Query: 491 NSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIE 550
           NSQI MYAKSGD  SANLTF + ENP+ VSWS MICS AQHG A EA+  FELMK+CGI 
Sbjct: 509 NSQICMYAKSGDIDSANLTFTETENPDVVSWSVMICSKAQHGCAWEALELFELMKNCGIA 568

Query: 551 PNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAES 610
           PNH  FLGVL ACSH GLVEEGLRYF+ M+ DY MT +V+HC C VDLLGRAGRL+DAE+
Sbjct: 569 PNHITFLGVLTACSHGGLVEEGLRYFEIMKNDYGMTTNVQHCACAVDLLGRAGRLVDAEN 628

Query: 611 LILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGN 670
            I + GF+  PVMWRALLSACR++KDT  A+RVA+KLI LEP A+ASYVLLYNIY DAG 
Sbjct: 629 FIFNSGFEDNPVMWRALLSACRVYKDTVAAKRVAEKLINLEPQAAASYVLLYNIYNDAGI 688

Query: 671 KSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKR 730
           +  A K+R+LM DR +KKEPGLSWI+VG+KV+SFVSGD+SH+  +LIY +L++ML + K+
Sbjct: 689 ELPAKKIRELMTDRGVKKEPGLSWIEVGNKVHSFVSGDQSHQMIQLIYVRLEEMLGKMKK 748

Query: 731 ----LDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHM 790
               + S  +  D K+ H       YHSE LAV FG++ L +SAPVRVMKNLR+C DCH 
Sbjct: 749 IGCMMTSGPEIKDRKVVH-------YHSEMLAVTFGIISLPQSAPVRVMKNLRVCSDCHT 808

Query: 791 TMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
           TMKLFS VEKREIILRD +RFHHF+DG+CSC DY
Sbjct: 809 TMKLFSEVEKREIILRDPIRFHHFRDGACSCRDY 835

BLAST of Lsi08G001020 vs. NCBI nr
Match: gi|225460338|ref|XP_002280412.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Vitis vinifera])

HSP 1 Score: 964.5 bits (2492), Expect = 1.7e-277
Identity = 484/793 (61.03%), Postives = 610/793 (76.92%), Query Frame = 1

Query: 33  YSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDT 92
           Y L + L+SV Y KLVQ +T+TG+L HGKL H HMI+T F+PCLFL NNLL MYCKCG+T
Sbjct: 11  YYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGET 70

Query: 93  HSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTAC 152
             A KLFD+M K N++++NSLISGY Q+G + +VM LF +AR   L+LDK+T + AL+ C
Sbjct: 71  DVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130

Query: 153 SQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWN 212
            ++ +L  G++IH LI V GLG  V+LTNSLIDMY KCG++D AR++F+ +D+LD VSWN
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190

Query: 213 SLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAI 272
           SLIAGYV+ G  +E+L +L KM ++GL  N++ LGSALKAC SNFS     G MLH  A+
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250

Query: 273 KLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFA 332
           KLGL LDVVVGTALLD Y K G L DA +IF  M D NVVMYNAM+AG LQ ET+ D+FA
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310

Query: 333 YKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVL 392
            +A+ LFFEM+S G+KPS FT+SS+LKAC T+E FE  KQ+HA I K  LQSDE+IG+ L
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNAL 370

Query: 393 IDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDE 452
           ++LYSL GS++D L CF+S     +V  T+++VG++QNG+FE  L+LF+ELL S  KPDE
Sbjct: 371 VELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDE 430

Query: 453 FILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQ 512
           F +S +LSACAN+  ++SGEQI  YA K GI  FTI QNSQI MYAK GD  SAN+TF++
Sbjct: 431 FTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490

Query: 513 MENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 572
            +NP+ VSWS MI S+AQHG A EA+  FELMK  GI PNH  FLGVL+ACSH GLVEEG
Sbjct: 491 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 550

Query: 573 LRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACR 632
           LRYF+ M+KD+ +T +VKH  C+VDLLGRAGRL +AES I+  GF+ +PVMWR+LLSACR
Sbjct: 551 LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACR 610

Query: 633 IHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGL 692
           +HK T T +RVA+++IELEP A+ASYVLLYNIY DAG +  A+++R LM+DR +KKEPGL
Sbjct: 611 VHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGL 670

Query: 693 SWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLD-----SAKDTSDYKIEHEYM 752
           SWI+VG+ V+SFV+GDRSH NS++IY +L++ML   K+LD        D S+ K  H+  
Sbjct: 671 SWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPK--HKDN 730

Query: 753 TNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRF 812
           + V+YHSEKLAV FG++ L  SAPVRVMKNLR C  CH TMKLFS +E REIILRD +RF
Sbjct: 731 SMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRF 790

Query: 813 HHFKDGSCSCGDY 821
           H F+DGSCSCGDY
Sbjct: 791 HRFRDGSCSCGDY 801

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP228_ARATH1.6e-20352.75Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN... [more]
PP172_ARATH8.9e-14637.76Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
PP272_ARATH1.7e-13636.13Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP347_ARATH3.1e-13037.66Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN... [more]
PP320_ARATH1.4e-12734.97Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A0A0KSU3_CUCSA0.0e+0089.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648690 PE=4 SV=1[more]
M5Y697_PRUPE1.4e-27563.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017671mg PE=4 SV=1[more]
B9S753_RICCO1.0e-27360.00Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
F6I3W2_VITVI9.2e-26761.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01110 PE=4 SV=... [more]
A0A118JTP6_CYNCS1.7e-24955.19Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007343 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT3G13880.19.0e-20552.75 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G27610.15.0e-14737.76 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49170.19.5e-13836.13 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33170.11.7e-13137.66 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G18750.18.0e-12934.97 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659119276|ref|XP_008459568.1|0.0e+0089.76PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X1 [Cuc... [more]
gi|778707858|ref|XP_004141630.2|0.0e+0089.88PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Cucumis sativu... [more]
gi|659119278|ref|XP_008459569.1|0.0e+0091.39PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Cuc... [more]
gi|645224258|ref|XP_008219023.1|2.5e-28962.16PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Prunus mume][more]
gi|225460338|ref|XP_002280412.1|1.7e-27761.03PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Vit... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0000469cleavage involved in rRNA processing
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR009292RRP36
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000469 cleavage involved in rRNA processing
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0051604 protein maturation
biological_process GO:1900864 mitochondrial RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G001020.1Lsi08G001020.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 209..239
score: 1.1E-6coord: 80..104
score: 5.0E-4coord: 420..444
score: 0.0059coord: 181..201
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 516..562
score: 1.8E-7coord: 105..152
score: 1.3E-7coord: 309..361
score: 5.6
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 80..103
score: 8.6E-4coord: 519..552
score: 1.2E-6coord: 209..241
score: 1.7E-6coord: 421..452
score: 8.6E-4coord: 108..141
score: 5.6E-4coord: 284..312
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 517..551
score: 11.246coord: 385..415
score: 5.218coord: 106..140
score: 10.819coord: 350..384
score: 8.024coord: 315..349
score: 5.81coord: 451..485
score: 6.5coord: 141..175
score: 5.536coord: 40..74
score: 7.147coord: 176..206
score: 6.96coord: 654..688
score: 6.522coord: 552..582
score: 6.763coord: 207..241
score: 10.918coord: 416..450
score: 8.451coord: 279..313
score: 9.602coord: 75..105
score: 7
IPR009292rRNA biogenesis protein RRP36PFAMPF06102DUF947coord: 1090..1174
score: 5.7E-15coord: 1025..1082
score: 1.9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 174..234
score: 1.1E-8coord: 451..452
score: 1.1E-8coord: 274..310
score: 1.1E-8coord: 81..137
score: 1.1E-8coord: 621..673
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 63..235
score: 3.0
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 67..350
score: 0.0coord: 386..695
score:
NoneNo IPR availablePANTHERPTHR24015:SF398SUBFAMILY NOT NAMEDcoord: 386..695
score: 0.0coord: 67..350
score:

The following gene(s) are paralogous to this gene:

None