BLAST of Lsi08G001020 vs. Swiss-Prot
Match:
PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1)
HSP 1 Score: 711.4 bits (1835), Expect = 1.6e-203
Identity = 364/690 (52.75%), Postives = 482/690 (69.86%), Query Frame = 1
Query: 36 NILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSA 95
N L+S Y L Q+A K+G++ GKL H HMI++S PCL+L NNLLNMYCKC + A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 96 DKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 155
+LFD+M + NII++NSLISGY Q+G +++ M LF +AR LKLDK+T AGAL C +
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 156 GNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLI 215
+L G+++HGL++V GL QV L N LIDMYSKCG++DQA LFD D+ D VSWNSLI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 216 AGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFS-GCKMFGTMLHNLAIKL 275
+GYV+ G EE L +L KMH+ GL T+ LGS LKAC N + G G +H KL
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 276 GLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYK 335
G+ D+VV TALLDMY K GSL +AI++F M KNVV YNAM++G LQ + I D+ + +
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 336 ALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLID 395
A LF +M+ G++PS T+S +LKAC + E+ +Q+HALICKN QSDE+IGS LI+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 396 LYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFI 455
LY+L+GS +D + CF S I T+M+ ++QN + ESA LF +L +S +P+E+
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 456 LSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQME 515
+S ++SACA+ L SGEQIQGYA K GI FT + S I MYAKSG+ AN F +++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 516 NPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 575
NP+ ++S MI S AQHG A EA+ FE MK+ GI+PN AFLGVLIAC H GLV +GL+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 576 YFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIH 635
YF M+ DY + + KH C+VDLLGR GRL DAE+LIL GF+ PV WRALLS+CR++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 636 KDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSW 695
KD+ +RVA++L+ELEP AS SYVLL+NIY D+G S A +VR+LM DR +KKEP LSW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701
Query: 696 IQVGDKVYSFVSGDRSHKNSELIYAKLDKM 725
I +G++ +SF D SH +S++IY L+ M
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
BLAST of Lsi08G001020 vs. Swiss-Prot
Match:
PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 8.9e-146
Identity = 290/768 (37.76%), Postives = 455/768 (59.24%), Query Frame = 1
Query: 60 GKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQ 119
G+ +H I+ F + + +L++ Y K + K+FD+M + N++T+ +LISGY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 120 IGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVL 179
+D+V+ LF + + G + + +T A AL ++ G G +H +++ GL + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 180 TNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGL 239
+NSLI++Y KCG V +ARILFD ++ V+WNS+I+GY NG E L + M +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 240 AFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDA 299
+ + S +K C+ N + F LH +K G D + TAL+ Y+K ++ DA
Sbjct: 292 RLSESSFASVIKLCA-NLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351
Query: 300 IQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLL 359
+++F ++ NVV + AM++G LQ + E+ A++LF EMK G++P+ FTYS +L
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEE-----AVDLFSEMKRKGVRPNEFTYSVIL 411
Query: 360 KACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIV 419
A + E VHA + K + +G+ L+D Y LG +++A F+ I IV
Sbjct: 412 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 471
Query: 420 PMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACA-NMGMLRSGEQIQGY 479
+AM+ GY Q GE E+A+ +F EL KP+EF S+IL+ CA + G+Q G+
Sbjct: 472 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 531
Query: 480 ATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEA 539
A K + ++ + MYAK G+ SA F++ + VSW++MI AQHG A++A
Sbjct: 532 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 591
Query: 540 MRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVD 599
+ F+ MK ++ + F+GV AC+H GLVEEG +YFD M +D + +H C+VD
Sbjct: 592 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 651
Query: 600 LLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASAS 659
L RAG+L A +I ++ +WR +L+ACR+HK T + A+K+I ++P SA+
Sbjct: 652 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 711
Query: 660 YVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELI 719
YVLL N+Y ++G+ + +KVRKLM +R +KKEPG SWI+V +K YSF++GDRSH + I
Sbjct: 712 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 771
Query: 720 YAKLDKMLARTKRLDSAKDTS----DYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVR 779
Y KL+ + R K L DTS D EH+ + HSE+LA+AFG++ + +P+
Sbjct: 772 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV-LAQHSERLAIAFGLIATPKGSPLL 831
Query: 780 VMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF-KDGSCSCGDY 821
++KNLR+C DCH+ +KL + +E+REI++RDS RFHHF DG CSCGD+
Sbjct: 832 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
BLAST of Lsi08G001020 vs. Swiss-Prot
Match:
PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-136
Identity = 289/800 (36.12%), Postives = 445/800 (55.62%), Query Frame = 1
Query: 39 LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
++SV + L++S + + GKLVH+ +I P L N+L+++Y K GD+ A+ +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 99 FDKM---SKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 158
F+ M K ++++++++++ Y G + +F + LGL + Y + ACS S
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 159 GNLSAGKMIHGLILVCG-LGSQVVLTNSLIDMYSKC-GQVDQARILFDHSDKLDGVSWNS 218
+ G++ G ++ G S V + SLIDM+ K + A +FD +L+ V+W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 219 LIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACS--SNFSGCKMFGTMLHNLA 278
+I +Q G E + M G + FTL S AC+ N S G LH+ A
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS----LGKQLHSWA 299
Query: 279 IKLGLHLDVVVGTALLDMYTK---TGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 338
I+ GL D V +L+DMY K GS+ D ++FD+M D +V+ + A++ G ++ +
Sbjct: 300 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL- 359
Query: 339 DKFAYKALNLFFEMKSCG-IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEY 398
A +A+NLF EM + G ++P+ FT+SS KAC + D KQV K GL S+
Sbjct: 360 ---ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 419
Query: 399 IGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSE 458
+ + +I ++ M+DA F S+ +V + G +N FE A L E+ E
Sbjct: 420 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 479
Query: 459 EKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSAN 518
F +++LS AN+G +R GEQI K+G+S N+ I MY+K G +A+
Sbjct: 480 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 539
Query: 519 LTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRG 578
F MEN N +SW++MI A+HG A+ + F M G++PN ++ +L ACSH G
Sbjct: 540 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 599
Query: 579 LVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRAL 638
LV EG R+F++M +D+ + ++H C+VDLL RAG L DA I + F+ + ++WR
Sbjct: 600 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 659
Query: 639 LSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIK 698
L ACR+H +T + A+K++EL+P A+Y+ L NIY AG +++++R+ M++R +
Sbjct: 660 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 719
Query: 699 KEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDT-------SDY 758
KE G SWI+VGDK++ F GD +H N+ IY +LD+++ KR DT +
Sbjct: 720 KEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEE 779
Query: 759 KIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREII 818
E E + HSEK+AVAFG++ S+S PVRV KNLR+C DCH MK S V REI+
Sbjct: 780 NDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIV 839
Query: 819 LRDSVRFHHFKDGSCSCGDY 821
LRD RFHHFKDG CSC DY
Sbjct: 840 LRDLNRFHHFKDGKCSCNDY 849
BLAST of Lsi08G001020 vs. Swiss-Prot
Match:
PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 468.0 bits (1203), Expect = 3.1e-130
Identity = 273/725 (37.66%), Postives = 406/725 (56.00%), Query Frame = 1
Query: 100 DKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLS 159
D S II N +S Y+ G + ++ F ++ D+ T L + +L+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 160 AGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYV 219
G+ +H + L GL + ++NSLI+MY K + AR +FD+ + D +SWNS+IAG
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 220 QNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLD 279
QNG E + + ++ + GL + +T+ S LKA SS G + +H AIK+ D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL-SKQVHVHAIKINNVSD 452
Query: 280 VVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLF 339
V TAL+D Y++ + +A +F++ + ++V +NAMMAG Q +K L LF
Sbjct: 453 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHD-----GHKTLKLF 512
Query: 340 FEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLL 399
M G + FT +++ K C + KQVHA K+G D ++ S ++D+Y
Sbjct: 513 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572
Query: 400 GSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTIL 459
G M A F+SI + V T M+ G ++NGE E A +F ++ PDEF ++T+
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 632
Query: 460 SACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAV 519
A + + L G QI A K+ + S + MYAK G A F+++E N
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692
Query: 520 SWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 579
+W+ M+ AQHG E ++ F+ MKS GI+P+ F+GVL ACSH GLV E ++ +M
Sbjct: 693 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 752
Query: 580 EKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFT 639
DY + ++H C+ D LGRAG + AE+LI + + M+R LL+ACR+ DT T
Sbjct: 753 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 812
Query: 640 AQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGD 699
+RVA KL+ELEPL S++YVLL N+Y A + R +M+ ++KK+PG SWI+V +
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872
Query: 700 KVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKI----EHEYMTNVNYHSE 759
K++ FV DRS++ +ELIY K+ M+ K+ +T D+ + E E + YHSE
Sbjct: 873 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET-DFTLVDVEEEEKERALYYHSE 932
Query: 760 KLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSC 819
KLAVAFG+L S P+RV+KNLR+C DCH MK + V REI+LRD+ RFH FKDG C
Sbjct: 933 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 989
Query: 820 SCGDY 821
SCGDY
Sbjct: 993 SCGDY 989
BLAST of Lsi08G001020 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-127
Identity = 271/775 (34.97%), Postives = 416/775 (53.68%), Query Frame = 1
Query: 47 LVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPN 106
++Q + +L GK V + + F L + L MY CGD A ++FD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 107 IITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 166
+ +N L++ + G+ + LF K G+++D YT + + S ++ G+ +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 167 LILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 226
IL G G + + NSL+ Y K +VD AR +FD + D +SWNS+I GYV NG E+
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 227 LLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTAL 286
L++ +M G+ + T+ S C+ S G +H++ +K + L
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDRFCNTL 339
Query: 287 LDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCG 346
LDMY+K G L A +F +M D++VV Y +M+AG ++ A +A+ LF EM+ G
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----LAGEAVKLFEEMEEEG 399
Query: 347 IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDAL 406
I P ++T +++L C + K+VH I +N L D ++ + L+D+Y+ GSM++A
Sbjct: 400 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 459
Query: 407 SCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEE-KPDEFILSTILSACANM 466
F+ + + I+ ++ GY +N ALSLF LL + PDE ++ +L ACA++
Sbjct: 460 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 519
Query: 467 GMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMI 526
G +I GY + G NS + MYAK G A++ F + + + VSW+ MI
Sbjct: 520 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 579
Query: 527 CSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNM 586
HG EA+ F M+ GIE + +F+ +L ACSH GLV+EG R+F+ M + +
Sbjct: 580 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 639
Query: 587 TIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQ 646
V+H C+VD+L R G LI A I ++ + +W ALL CRIH D A++VA+
Sbjct: 640 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 699
Query: 647 KLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFV 706
K+ ELEP + YVL+ NIY +A ++RK + R ++K PG SWI++ +V FV
Sbjct: 700 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 759
Query: 707 SGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNVNY---HSEKLAVAFG 766
+GD S+ +E I A L K+ AR + T I+ E M HSEKLA+A G
Sbjct: 760 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 819
Query: 767 VLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSC 818
++ +RV KNLR+C DCH K S + +REI+LRDS RFH FKDG CSC
Sbjct: 820 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
BLAST of Lsi08G001020 vs. TrEMBL
Match:
A0A0A0KSU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648690 PE=4 SV=1)
HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 737/820 (89.88%), Postives = 771/820 (94.02%), Query Frame = 1
Query: 1 MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
MF LP S RQ IESFATL +SLSSSQV PAYS LLESVDYVKLVQSATKTG LNHG
Sbjct: 19 MFHMLPFSSRQSIESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHG 78
Query: 61 KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGDT SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79 KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138
Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
N DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILV GLGSQVVLT
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLT 198
Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ GLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 258
Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
FNT+TLGSALKACSSNF+GCKMFGTMLH+ AIKLGLHLDVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 318
Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378
Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
CI VEDF+FAKQVHAL+CKNGL SDEYIGS+LIDLYS+LGSM DAL CFNSIH IVPM
Sbjct: 379 CIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 438
Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
TAM+ GYLQNGEFESALSLFYELLT EEKPDEFI STI+S+CANMGMLRSGEQIQG+ATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 498
Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
+GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWSTMICS+AQHGHA+EA+RF
Sbjct: 499 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 558
Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618
Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
RAGRL DAESLIL LGF+HEPVMWRALLSACRIHKDT TAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVL 678
Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
LYNIYMDAGNK ASKVR LME+RRIKKEPGLSWIQ+GDKVYSFVSGDRSHKNS IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAK 738
Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
LD+MLA TKRLDSAKD YKIEHE++TNVNYHSEKLAVAFGVL+LSESAPVRVMKNLRI
Sbjct: 739 LDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRI 798
Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
CLDCHMTMKLFSIVEKRE+I+RDSVRFHHFKDGSCSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDY 838
BLAST of Lsi08G001020 vs. TrEMBL
Match:
M5Y697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017671mg PE=4 SV=1)
HSP 1 Score: 957.6 bits (2474), Expect = 1.4e-275
Identity = 479/758 (63.19%), Postives = 576/758 (75.99%), Query Frame = 1
Query: 67 MIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKV 126
M++T F+PCLFL NNLLNMYCK G+ SA LFDKM K N+I+YNSLISGY Q+G DK
Sbjct: 1 MVKTCFKPCLFLLNNLLNMYCKRGELDSACNLFDKMPKRNVISYNSLISGYTQVGLFDKA 60
Query: 127 MILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDM 186
M +FN+AR GLKLDK+T A AL+ C Q+ + GK++HGLI++ G GS VVLTNSL+DM
Sbjct: 61 MGVFNEARVTGLKLDKFTYASALSVCGQTCYIELGKLVHGLIVLSGSGSDVVLTNSLMDM 120
Query: 187 YSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTL 246
YSKCG VD A+ILF++SD LD VSWNSLIA Y + G EE L L KMHQ G + NT+TL
Sbjct: 121 YSKCGWVDHAKILFENSDNLDDVSWNSLIASYARIGANEETLRTLVKMHQCGFSLNTYTL 180
Query: 247 GSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQM 306
GSALKAC F ++FG +LH +KLGL LDVVVGTALLDMY KTG LGDAIQIF M
Sbjct: 181 GSALKACCKIFDNSELFGKLLHGYTVKLGLDLDVVVGTALLDMYAKTGDLGDAIQIFKVM 240
Query: 307 VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVED 366
+NVVMYNAM+AG LQ +T + A + NL +M+ G+KPS FT+S +L+AC +VE
Sbjct: 241 PYRNVVMYNAMIAGFLQIDTFSYEHANEVFNLLSQMQRLGVKPSTFTFSIILRACKSVEA 300
Query: 367 FEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVG 426
FE+ KQVH +CK LQ DE+IGS LID YS LG +DAL CFN IV T+M+ G
Sbjct: 301 FEYGKQVHTQVCKYNLQGDEFIGSGLIDFYSSLGLFEDALKCFNLTPRLDIVSWTSMVAG 360
Query: 427 YLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRF 486
Y+QNGE ESA LFYELL S +KPDEFI+S++L ACAN+ RSGEQIQGYA K G+ +F
Sbjct: 361 YIQNGETESAFDLFYELLASGKKPDEFIISSMLGACANLAAARSGEQIQGYAVKAGVGKF 420
Query: 487 TIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKS 546
TI QNSQI MYAKSGD SANLTF + ENP+ VSWS MICS AQHG A EA+ FELMK+
Sbjct: 421 TIVQNSQICMYAKSGDIDSANLTFTETENPDVVSWSVMICSKAQHGCAREALELFELMKN 480
Query: 547 CGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLI 606
CGI PNH FLGVL ACSH GLVEEGLRYF+ M+ DY MT +V+HC C VDLLGRAGRL+
Sbjct: 481 CGIAPNHITFLGVLTACSHGGLVEEGLRYFEIMKNDYGMTTNVQHCACAVDLLGRAGRLV 540
Query: 607 DAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYM 666
DAE+ I + GF+ PVMWRALLSACR++KDT A+RVA+KLI LEP A+ASYVLLYNIY
Sbjct: 541 DAENFIFNSGFEDNPVMWRALLSACRVYKDTVAAKRVAEKLINLEPQAAASYVLLYNIYN 600
Query: 667 DAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLA 726
DAG + A K+R+LM DR +KKEPGLSWI+VG++V+SFVSGD+SH+ +LIYA+L++ML
Sbjct: 601 DAGIELPAKKIRELMTDRGVKKEPGLSWIEVGNEVHSFVSGDQSHQMIQLIYARLEEMLG 660
Query: 727 RTKR----LDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICL 786
+ K+ + S + D K+ V YHSE LAV FG++ L +SAPVRVMKNLR+C
Sbjct: 661 KMKKIGCMITSGPEIKDRKV-------VYYHSENLAVTFGIISLPQSAPVRVMKNLRVCS 720
Query: 787 DCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
DCH TMK FS VEKREIILRD +RFHHF+DG+CSC DY
Sbjct: 721 DCHTTMKFFSEVEKREIILRDPIRFHHFRDGACSCRDY 751
BLAST of Lsi08G001020 vs. TrEMBL
Match:
B9S753_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1333850 PE=4 SV=1)
HSP 1 Score: 951.4 bits (2458), Expect = 1.0e-273
Identity = 474/790 (60.00%), Postives = 601/790 (76.08%), Query Frame = 1
Query: 39 LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
L+SV Y KLVQ ++K+G+ HGKL H+HMI+T+F PCLFL NN LN+Y K G+ +A KL
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 99 FDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNL 158
FD+MS+ ++I+YN LISGY +G + K + LF++AR LKLDK++ AG L+AC Q +
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 159 SAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGY 218
+ GK+IHGL +VCGLG QV LTN LIDMY KC ++D AR+LF+ SD+LD VSWNSLI GY
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186
Query: 219 VQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHL 278
+ G YEE+L +L KMH GL N FTLGSALK+C N + +G LH +K GL L
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDL 246
Query: 279 DVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNL 338
D+VVGTALLDMY KTG LGDAIQ+F ++NVVMYNAM+AG +Q E I+ + AY+AL L
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKL 306
Query: 339 FFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSL 398
F +M+ GIKPS FT+SS++K C +E FE+ KQ+HA ICK+ +QSDE+IGS LI+LYSL
Sbjct: 307 FSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSL 366
Query: 399 LGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTI 458
LGS +D L CFNS IV T M+ GY QNG+FESAL+LFYELL S +KPDEFI++T+
Sbjct: 367 LGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTM 426
Query: 459 LSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNA 518
LSACA++ RSGEQ+ GYA K GI I QNSQI MYAKSG+ SA +TF++++NP+
Sbjct: 427 LSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDV 486
Query: 519 VSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDT 578
VSWS MICS+AQHGHA +A+ FELMKS GI PN FLGVL ACSH GLVEEGLRY+++
Sbjct: 487 VSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYES 546
Query: 579 MEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTF 638
M+KDY+M I+VKHC C+VDLL RAGRL+DA++ IL+ GF PVMWR LLS CRI+KD
Sbjct: 547 MKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIV 606
Query: 639 TAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVG 698
T + VA+KLIEL+P S+SYVLLYNIY DAG A+K+R+LM+DR I+KEPG SWI+VG
Sbjct: 607 TGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVG 666
Query: 699 DKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMT--------NV 758
++V+SFV GD SH S++IY KL+ ML + +++ D KI++ ++ V
Sbjct: 667 NEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYI----DQKIQNVTISTKEVKGTLGV 726
Query: 759 NYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF 818
N+HSEKLAV+FG++ L SAPV+VMKNLR+C DCH TMKL S+VEKREIILRDS+RFHHF
Sbjct: 727 NHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHF 786
Query: 819 KDGSCSCGDY 821
K+GSCSC DY
Sbjct: 787 KEGSCSCNDY 792
BLAST of Lsi08G001020 vs. TrEMBL
Match:
F6I3W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01110 PE=4 SV=1)
HSP 1 Score: 928.3 bits (2398), Expect = 9.2e-267
Identity = 465/760 (61.18%), Postives = 586/760 (77.11%), Query Frame = 1
Query: 66 HMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDK 125
HMI+T F+PCLFL NNLL MYCKCG+T A KLFD+M K N++++NSLISGY Q+G + +
Sbjct: 2 HMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHE 61
Query: 126 VMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLID 185
VM LF +AR L+LDK+T + AL+ C ++ +L G++IH LI V GLG V+LTNSLID
Sbjct: 62 VMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLID 121
Query: 186 MYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFT 245
MY KCG++D AR++F+ +D+LD VSWNSLIAGYV+ G +E+L +L KM ++GL N++
Sbjct: 122 MYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYA 181
Query: 246 LGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQ 305
LGSALKAC SNFS G MLH A+KLGL LDVVVGTALLD Y K G L DA +IF
Sbjct: 182 LGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKL 241
Query: 306 MVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVE 365
M D NVVMYNAM+AG LQ ET+ D+FA +A+ LFFEM+S G+KPS FT+SS+LKAC T+E
Sbjct: 242 MPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIE 301
Query: 366 DFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMV 425
FE KQ+HA I K LQSDE+IG+ L++LYSL GS++D L CF+S +V T+++V
Sbjct: 302 AFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIV 361
Query: 426 GYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISR 485
G++QNG+FE L+LF+ELL S KPDEF +S +LSACAN+ ++SGEQI YA K GI
Sbjct: 362 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 421
Query: 486 FTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMK 545
FTI QNSQI MYAK GD SAN+TF++ +NP+ VSWS MI S+AQHG A EA+ FELMK
Sbjct: 422 FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMK 481
Query: 546 SCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRL 605
GI PNH FLGVL+ACSH GLVEEGLRYF+ M+KD+ +T +VKH C+VDLLGRAGRL
Sbjct: 482 GSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 541
Query: 606 IDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIY 665
+AES I+ GF+ +PVMWR+LLSACR+HK T T +RVA+++IELEP A+ASYVLLYNIY
Sbjct: 542 AEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIY 601
Query: 666 MDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKML 725
DAG + A+++R LM+DR +KKEPGLSWI+VG+ V+SFV+GDRSH NS++IY +L++ML
Sbjct: 602 NDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEML 661
Query: 726 ARTKRLD-----SAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 785
K+LD D S+ K H+ + V+YHSEKLAV FG++ L SAPVRVMKNLR
Sbjct: 662 EEIKKLDYIDEKLVSDASEPK--HKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRS 721
Query: 786 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
C CH TMKLFS +E REIILRD +RFH F+DGSCSCGDY
Sbjct: 722 CWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDY 759
BLAST of Lsi08G001020 vs. TrEMBL
Match:
A0A118JTP6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007343 PE=4 SV=1)
HSP 1 Score: 870.9 bits (2249), Expect = 1.7e-249
Identity = 436/790 (55.19%), Postives = 570/790 (72.15%), Query Frame = 1
Query: 31 PAYSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCG 90
P L L+ V Y KLVQS+ G HGKLV SHM++T + P LFL N LLNMY KC
Sbjct: 45 PPCELGNSLDDVTYTKLVQSSMHLGCSVHGKLVQSHMVKTGYNPGLFLHNTLLNMYLKCN 104
Query: 91 DTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALT 150
++ A +LFD+M++ N++++NSLISGY ++G + +F KAR + ++K+T A L+
Sbjct: 105 ESDMALQLFDEMAERNVVSWNSLISGYTRLGLYSNAKEIFCKARIANIDINKFTFASMLS 164
Query: 151 ACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVS 210
C+Q+ +L GK++HGL++ G+G LTN L+ MYSKCG+VDQAR+ FD D LD VS
Sbjct: 165 ICAQTSDLKLGKVVHGLLMSSGIGVAAFLTNPLVAMYSKCGRVDQARVAFDQCDGLDDVS 224
Query: 211 WNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNL 270
WNS+IAGYV+ G ++E+L +L KMH+YG+ F+++ LGS L AC NF ++G +LH+
Sbjct: 225 WNSMIAGYVKAGLHDEMLQVLVKMHRYGVRFSSYVLGSVLSACCLNFDRSLVWGKLLHSC 284
Query: 271 AIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 330
++KLG LDVVVGTALLDMY K G L DA+ F + DKNVVMYNAM++GLL+ E D+
Sbjct: 285 SVKLGWDLDVVVGTALLDMYAKIGDLDDAVSTFSVLNDKNVVMYNAMISGLLRGEENSDE 344
Query: 331 FAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGS 390
+A KALNLF EM+ G++PS FT+S+++KACI +DFE+ KQ+H L+CKN LQSDEYIGS
Sbjct: 345 YAKKALNLFAEMQRHGLRPSEFTFSTIIKACIACKDFEYGKQIHGLVCKNNLQSDEYIGS 404
Query: 391 VLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKP 450
+L+++YS+ S DALSCF+S IV T+M+VG+ QNGE+E AL LF +LL+S KP
Sbjct: 405 MLVEMYSMWSSTDDALSCFDSTCKQDIVIWTSMIVGHAQNGEYERALVLFCKLLSSGLKP 464
Query: 451 DEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTF 510
DEF +ST+LSACAN+ RSGEQIQ Y+ K GI + +NS I+MYAKSGD SAN TF
Sbjct: 465 DEFTISTMLSACANLAAARSGEQIQSYSIKTGIIESGVVRNSLIYMYAKSGDIDSANQTF 524
Query: 511 QQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 570
+ + + VSWS MICS+A HG A EA+ FELM S GI PN AFLGVL ACSH GLVE
Sbjct: 525 KAADKSDVVSWSVMICSTAHHGCAKEALSLFELMISSGIAPNDVAFLGVLTACSHGGLVE 584
Query: 571 EGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSA 630
EGLR D+ + KHC C+ DL GRAGRL DA++ I+ GF H P+MWR LLS+
Sbjct: 585 EGLR-------DHGIAPTEKHCACIADLYGRAGRLSDAKTFIMDSGFSHAPIMWRTLLSS 644
Query: 631 CRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEP 690
CRIHK+T + VA++LIELEP AS+SYVLLYNIY DA + A+++R LM +RRIKKEP
Sbjct: 645 CRIHKNTEIGKHVAKRLIELEPQASSSYVLLYNIYNDARMEEAATEIRDLMSNRRIKKEP 704
Query: 691 GLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNV 750
GLSWI+VG++V SF+ GD+ H SE IYAKLD +L K++ ++ V
Sbjct: 705 GLSWIEVGNRVNSFLVGDKCHPQSEKIYAKLDDLLQEIKKIG--------YVDELEKDEV 764
Query: 751 NYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF 810
N+HSEKLAV+FG++ L+ SAP+RVMKNLR+C DCH +KL S VEKREI++RD +RFH F
Sbjct: 765 NHHSEKLAVSFGLIGLAPSAPLRVMKNLRVCRDCHTVIKLISKVEKREIVVRDPIRFHRF 819
Query: 811 KDGSCSCGDY 821
+DGSCSCGDY
Sbjct: 825 RDGSCSCGDY 819
BLAST of Lsi08G001020 vs. TAIR10
Match:
AT3G13880.1 (AT3G13880.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 711.4 bits (1835), Expect = 9.0e-205
Identity = 364/690 (52.75%), Postives = 482/690 (69.86%), Query Frame = 1
Query: 36 NILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSA 95
N L+S Y L Q+A K+G++ GKL H HMI++S PCL+L NNLLNMYCKC + A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 96 DKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 155
+LFD+M + NII++NSLISGY Q+G +++ M LF +AR LKLDK+T AGAL C +
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 156 GNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLI 215
+L G+++HGL++V GL QV L N LIDMYSKCG++DQA LFD D+ D VSWNSLI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 216 AGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFS-GCKMFGTMLHNLAIKL 275
+GYV+ G EE L +L KMH+ GL T+ LGS LKAC N + G G +H KL
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 276 GLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYK 335
G+ D+VV TALLDMY K GSL +AI++F M KNVV YNAM++G LQ + I D+ + +
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 336 ALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLID 395
A LF +M+ G++PS T+S +LKAC + E+ +Q+HALICKN QSDE+IGS LI+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 396 LYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFI 455
LY+L+GS +D + CF S I T+M+ ++QN + ESA LF +L +S +P+E+
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 456 LSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQME 515
+S ++SACA+ L SGEQIQGYA K GI FT + S I MYAKSG+ AN F +++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 516 NPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 575
NP+ ++S MI S AQHG A EA+ FE MK+ GI+PN AFLGVLIAC H GLV +GL+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 576 YFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIH 635
YF M+ DY + + KH C+VDLLGR GRL DAE+LIL GF+ PV WRALLS+CR++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 636 KDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSW 695
KD+ +RVA++L+ELEP AS SYVLL+NIY D+G S A +VR+LM DR +KKEP LSW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701
Query: 696 IQVGDKVYSFVSGDRSHKNSELIYAKLDKM 725
I +G++ +SF D SH +S++IY L+ M
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
BLAST of Lsi08G001020 vs. TAIR10
Match:
AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 519.6 bits (1337), Expect = 5.0e-147
Identity = 290/768 (37.76%), Postives = 455/768 (59.24%), Query Frame = 1
Query: 60 GKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQ 119
G+ +H I+ F + + +L++ Y K + K+FD+M + N++T+ +LISGY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 120 IGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVL 179
+D+V+ LF + + G + + +T A AL ++ G G +H +++ GL + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 180 TNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGL 239
+NSLI++Y KCG V +ARILFD ++ V+WNS+I+GY NG E L + M +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 240 AFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDA 299
+ + S +K C+ N + F LH +K G D + TAL+ Y+K ++ DA
Sbjct: 292 RLSESSFASVIKLCA-NLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351
Query: 300 IQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLL 359
+++F ++ NVV + AM++G LQ + E+ A++LF EMK G++P+ FTYS +L
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEE-----AVDLFSEMKRKGVRPNEFTYSVIL 411
Query: 360 KACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIV 419
A + E VHA + K + +G+ L+D Y LG +++A F+ I IV
Sbjct: 412 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 471
Query: 420 PMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACA-NMGMLRSGEQIQGY 479
+AM+ GY Q GE E+A+ +F EL KP+EF S+IL+ CA + G+Q G+
Sbjct: 472 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 531
Query: 480 ATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEA 539
A K + ++ + MYAK G+ SA F++ + VSW++MI AQHG A++A
Sbjct: 532 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 591
Query: 540 MRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVD 599
+ F+ MK ++ + F+GV AC+H GLVEEG +YFD M +D + +H C+VD
Sbjct: 592 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 651
Query: 600 LLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASAS 659
L RAG+L A +I ++ +WR +L+ACR+HK T + A+K+I ++P SA+
Sbjct: 652 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 711
Query: 660 YVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELI 719
YVLL N+Y ++G+ + +KVRKLM +R +KKEPG SWI+V +K YSF++GDRSH + I
Sbjct: 712 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 771
Query: 720 YAKLDKMLARTKRLDSAKDTS----DYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVR 779
Y KL+ + R K L DTS D EH+ + HSE+LA+AFG++ + +P+
Sbjct: 772 YMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV-LAQHSERLAIAFGLIATPKGSPLL 831
Query: 780 VMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHF-KDGSCSCGDY 821
++KNLR+C DCH+ +KL + +E+REI++RDS RFHHF DG CSCGD+
Sbjct: 832 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
BLAST of Lsi08G001020 vs. TAIR10
Match:
AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 488.8 bits (1257), Expect = 9.5e-138
Identity = 289/800 (36.12%), Postives = 445/800 (55.62%), Query Frame = 1
Query: 39 LESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKL 98
++SV + L++S + + GKLVH+ +I P L N+L+++Y K GD+ A+ +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 99 FDKM---SKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQS 158
F+ M K ++++++++++ Y G + +F + LGL + Y + ACS S
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 159 GNLSAGKMIHGLILVCG-LGSQVVLTNSLIDMYSKC-GQVDQARILFDHSDKLDGVSWNS 218
+ G++ G ++ G S V + SLIDM+ K + A +FD +L+ V+W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 219 LIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACS--SNFSGCKMFGTMLHNLA 278
+I +Q G E + M G + FTL S AC+ N S G LH+ A
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS----LGKQLHSWA 299
Query: 279 IKLGLHLDVVVGTALLDMYTK---TGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 338
I+ GL D V +L+DMY K GS+ D ++FD+M D +V+ + A++ G ++ +
Sbjct: 300 IRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL- 359
Query: 339 DKFAYKALNLFFEMKSCG-IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEY 398
A +A+NLF EM + G ++P+ FT+SS KAC + D KQV K GL S+
Sbjct: 360 ---ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 419
Query: 399 IGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSE 458
+ + +I ++ M+DA F S+ +V + G +N FE A L E+ E
Sbjct: 420 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 479
Query: 459 EKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSAN 518
F +++LS AN+G +R GEQI K+G+S N+ I MY+K G +A+
Sbjct: 480 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 539
Query: 519 LTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRG 578
F MEN N +SW++MI A+HG A+ + F M G++PN ++ +L ACSH G
Sbjct: 540 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 599
Query: 579 LVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRAL 638
LV EG R+F++M +D+ + ++H C+VDLL RAG L DA I + F+ + ++WR
Sbjct: 600 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 659
Query: 639 LSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIK 698
L ACR+H +T + A+K++EL+P A+Y+ L NIY AG +++++R+ M++R +
Sbjct: 660 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 719
Query: 699 KEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDT-------SDY 758
KE G SWI+VGDK++ F GD +H N+ IY +LD+++ KR DT +
Sbjct: 720 KEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEE 779
Query: 759 KIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREII 818
E E + HSEK+AVAFG++ S+S PVRV KNLR+C DCH MK S V REI+
Sbjct: 780 NDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIV 839
Query: 819 LRDSVRFHHFKDGSCSCGDY 821
LRD RFHHFKDG CSC DY
Sbjct: 840 LRDLNRFHHFKDGKCSCNDY 849
BLAST of Lsi08G001020 vs. TAIR10
Match:
AT4G33170.1 (AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 468.0 bits (1203), Expect = 1.7e-131
Identity = 273/725 (37.66%), Postives = 406/725 (56.00%), Query Frame = 1
Query: 100 DKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLS 159
D S II N +S Y+ G + ++ F ++ D+ T L + +L+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 160 AGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYV 219
G+ +H + L GL + ++NSLI+MY K + AR +FD+ + D +SWNS+IAG
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 220 QNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLD 279
QNG E + + ++ + GL + +T+ S LKA SS G + +H AIK+ D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL-SKQVHVHAIKINNVSD 452
Query: 280 VVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLF 339
V TAL+D Y++ + +A +F++ + ++V +NAMMAG Q +K L LF
Sbjct: 453 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHD-----GHKTLKLF 512
Query: 340 FEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLL 399
M G + FT +++ K C + KQVHA K+G D ++ S ++D+Y
Sbjct: 513 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572
Query: 400 GSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTIL 459
G M A F+SI + V T M+ G ++NGE E A +F ++ PDEF ++T+
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 632
Query: 460 SACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAV 519
A + + L G QI A K+ + S + MYAK G A F+++E N
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692
Query: 520 SWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 579
+W+ M+ AQHG E ++ F+ MKS GI+P+ F+GVL ACSH GLV E ++ +M
Sbjct: 693 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 752
Query: 580 EKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFT 639
DY + ++H C+ D LGRAG + AE+LI + + M+R LL+ACR+ DT T
Sbjct: 753 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 812
Query: 640 AQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGD 699
+RVA KL+ELEPL S++YVLL N+Y A + R +M+ ++KK+PG SWI+V +
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872
Query: 700 KVYSFVSGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKI----EHEYMTNVNYHSE 759
K++ FV DRS++ +ELIY K+ M+ K+ +T D+ + E E + YHSE
Sbjct: 873 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET-DFTLVDVEEEEKERALYYHSE 932
Query: 760 KLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSC 819
KLAVAFG+L S P+RV+KNLR+C DCH MK + V REI+LRD+ RFH FKDG C
Sbjct: 933 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 989
Query: 820 SCGDY 821
SCGDY
Sbjct: 993 SCGDY 989
BLAST of Lsi08G001020 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 459.1 bits (1180), Expect = 8.0e-129
Identity = 271/775 (34.97%), Postives = 416/775 (53.68%), Query Frame = 1
Query: 47 LVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPN 106
++Q + +L GK V + + F L + L MY CGD A ++FD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 107 IITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHG 166
+ +N L++ + G+ + LF K G+++D YT + + S ++ G+ +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 167 LILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 226
IL G G + + NSL+ Y K +VD AR +FD + D +SWNS+I GYV NG E+
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 227 LLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTAL 286
L++ +M G+ + T+ S C+ S G +H++ +K + L
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDRFCNTL 339
Query: 287 LDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCG 346
LDMY+K G L A +F +M D++VV Y +M+AG ++ A +A+ LF EM+ G
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----LAGEAVKLFEEMEEEG 399
Query: 347 IKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDAL 406
I P ++T +++L C + K+VH I +N L D ++ + L+D+Y+ GSM++A
Sbjct: 400 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 459
Query: 407 SCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEE-KPDEFILSTILSACANM 466
F+ + + I+ ++ GY +N ALSLF LL + PDE ++ +L ACA++
Sbjct: 460 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 519
Query: 467 GMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMI 526
G +I GY + G NS + MYAK G A++ F + + + VSW+ MI
Sbjct: 520 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 579
Query: 527 CSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNM 586
HG EA+ F M+ GIE + +F+ +L ACSH GLV+EG R+F+ M + +
Sbjct: 580 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 639
Query: 587 TIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQ 646
V+H C+VD+L R G LI A I ++ + +W ALL CRIH D A++VA+
Sbjct: 640 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 699
Query: 647 KLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFV 706
K+ ELEP + YVL+ NIY +A ++RK + R ++K PG SWI++ +V FV
Sbjct: 700 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 759
Query: 707 SGDRSHKNSELIYAKLDKMLARTKRLDSAKDTSDYKIEHEYMTNVNY---HSEKLAVAFG 766
+GD S+ +E I A L K+ AR + T I+ E M HSEKLA+A G
Sbjct: 760 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 819
Query: 767 VLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSC 818
++ +RV KNLR+C DCH K S + +REI+LRDS RFH FKDG CSC
Sbjct: 820 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
BLAST of Lsi08G001020 vs. NCBI nr
Match:
gi|659119276|ref|XP_008459568.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X1 [Cucumis melo])
HSP 1 Score: 1473.4 bits (3813), Expect = 0.0e+00
Identity = 736/820 (89.76%), Postives = 772/820 (94.15%), Query Frame = 1
Query: 1 MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
MF LP R+ IESFATLE +SLSSSQV PAYS LLESVDYVKLVQSATKTGNLN G
Sbjct: 19 MFHMLPFFSRESIESFATLESVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGNLNQG 78
Query: 61 KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGD SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79 KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDIRSADKLFDKMSKSNIVTYNSLISGYVQM 138
Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNL AGKMIHGLILV GLGSQVVLT
Sbjct: 139 STLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLFAGKMIHGLILVYGLGSQVVLT 198
Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELL ILQKMHQYGLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLPILQKMHQYGLA 258
Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
FNT+TLGSALKACSSNF+GCKMFGTMLH+LAIKLGLH DVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDLAIKLGLHRDVVVGTALLDMYAKTGSLDDAI 318
Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378
Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
CITV+DFEFAKQVHAL+CKNGL +DEYIGS LIDLYSLLGSM DALSCFNSIH IVPM
Sbjct: 379 CITVKDFEFAKQVHALMCKNGLLADEYIGSSLIDLYSLLGSMTDALSCFNSIHNLTIVPM 438
Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
TAM+ GYLQNGEFESALSLFYELLT EEKPDEFILSTI+S+CANMGMLRSGEQIQGYATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFILSTIMSSCANMGMLRSGEQIQGYATK 498
Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWST ICS+AQHGHA++A+R+
Sbjct: 499 TGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDTVSWSTTICSNAQHGHAMDALRY 558
Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618
Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
RAGRL+DAESLIL LGF+HEPVMWRALLSACRIHKDTFTAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLVDAESLILRLGFEHEPVMWRALLSACRIHKDTFTAQRVAQKVIELEPLASASYVL 678
Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
LYNIYMDAGNK ASKVRKLMED++IKKEPGLSWIQ+G+KVYSFVSGDRSH+NSE IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRKLMEDQKIKKEPGLSWIQIGNKVYSFVSGDRSHENSERIYAK 738
Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
LD+MLARTKRLDSAKD YKIEHEY+TNVNYHSEKLAVAFGVLHL+ESAPVRVMKNLRI
Sbjct: 739 LDEMLARTKRLDSAKDALGYKIEHEYLTNVNYHSEKLAVAFGVLHLAESAPVRVMKNLRI 798
Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
CLDCHMTMKLFSIVEKRE+ILRDSVRFHHFKDG CSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELILRDSVRFHHFKDGLCSCGDY 838
BLAST of Lsi08G001020 vs. NCBI nr
Match:
gi|778707858|ref|XP_004141630.2| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Cucumis sativus])
HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 737/820 (89.88%), Postives = 771/820 (94.02%), Query Frame = 1
Query: 1 MFPRLPVSRRQPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHG 60
MF LP S RQ IESFATL +SLSSSQV PAYS LLESVDYVKLVQSATKTG LNHG
Sbjct: 19 MFHMLPFSSRQSIESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHG 78
Query: 61 KLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQI 120
KLVHSHMI+TSFRPCLFLQNNLLNMYCKCGDT SADKLFDKMSK NI+TYNSLISGY+Q+
Sbjct: 79 KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138
Query: 121 GNHDKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLT 180
N DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILV GLGSQVVLT
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLT 198
Query: 181 NSLIDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLA 240
NSLIDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ GLA
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 258
Query: 241 FNTFTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAI 300
FNT+TLGSALKACSSNF+GCKMFGTMLH+ AIKLGLHLDVVVGTALLDMY KTGSL DAI
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 318
Query: 301 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKA 360
QIFDQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKA
Sbjct: 319 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA 378
Query: 361 CITVEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPM 420
CI VEDF+FAKQVHAL+CKNGL SDEYIGS+LIDLYS+LGSM DAL CFNSIH IVPM
Sbjct: 379 CIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPM 438
Query: 421 TAMMVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATK 480
TAM+ GYLQNGEFESALSLFYELLT EEKPDEFI STI+S+CANMGMLRSGEQIQG+ATK
Sbjct: 439 TAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK 498
Query: 481 IGISRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRF 540
+GISRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWSTMICS+AQHGHA+EA+RF
Sbjct: 499 VGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRF 558
Query: 541 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLG 600
FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLG
Sbjct: 559 FELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLG 618
Query: 601 RAGRLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVL 660
RAGRL DAESLIL LGF+HEPVMWRALLSACRIHKDT TAQRVAQK+IELEPLASASYVL
Sbjct: 619 RAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVL 678
Query: 661 LYNIYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAK 720
LYNIYMDAGNK ASKVR LME+RRIKKEPGLSWIQ+GDKVYSFVSGDRSHKNS IYAK
Sbjct: 679 LYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAK 738
Query: 721 LDKMLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRI 780
LD+MLA TKRLDSAKD YKIEHE++TNVNYHSEKLAVAFGVL+LSESAPVRVMKNLRI
Sbjct: 739 LDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRI 798
Query: 781 CLDCHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
CLDCHMTMKLFSIVEKRE+I+RDSVRFHHFKDGSCSCGDY
Sbjct: 799 CLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDY 838
BLAST of Lsi08G001020 vs. NCBI nr
Match:
gi|659119278|ref|XP_008459569.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Cucumis melo])
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 637/697 (91.39%), Postives = 667/697 (95.70%), Query Frame = 1
Query: 124 DKVMILFNKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSL 183
DKVMILF+KARRLGLKLDKYTCAGALTACSQSGNL AGKMIHGLILV GLGSQVVLTNSL
Sbjct: 5 DKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLFAGKMIHGLILVYGLGSQVVLTNSL 64
Query: 184 IDMYSKCGQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNT 243
IDMYSKCGQVD ARILFDHSDKLDGVSWNSLIAGYVQNGKYEELL ILQKMHQYGLAFNT
Sbjct: 65 IDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLPILQKMHQYGLAFNT 124
Query: 244 FTLGSALKACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIF 303
+TLGSALKACSSNF+GCKMFGTMLH+LAIKLGLH DVVVGTALLDMY KTGSL DAIQIF
Sbjct: 125 YTLGSALKACSSNFNGCKMFGTMLHDLAIKLGLHRDVVVGTALLDMYAKTGSLDDAIQIF 184
Query: 304 DQMVDKNVVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACIT 363
DQMVDKNVVMYNAMMAGLLQQETIEDK AYKALNLFFEMKSCGIKPSMFTYSSLLKACIT
Sbjct: 185 DQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIT 244
Query: 364 VEDFEFAKQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAM 423
V+DFEFAKQVHAL+CKNGL +DEYIGS LIDLYSLLGSM DALSCFNSIH IVPMTAM
Sbjct: 245 VKDFEFAKQVHALMCKNGLLADEYIGSSLIDLYSLLGSMTDALSCFNSIHNLTIVPMTAM 304
Query: 424 MVGYLQNGEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGI 483
+ GYLQNGEFESALSLFYELLT EEKPDEFILSTI+S+CANMGMLRSGEQIQGYATK GI
Sbjct: 305 IFGYLQNGEFESALSLFYELLTYEEKPDEFILSTIMSSCANMGMLRSGEQIQGYATKTGI 364
Query: 484 SRFTIFQNSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFEL 543
SRFTIFQNSQIWMYAKSGD Y+ANLTFQQMENP+ VSWST ICS+AQHGHA++A+R+FEL
Sbjct: 365 SRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDTVSWSTTICSNAQHGHAMDALRYFEL 424
Query: 544 MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAG 603
MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY M +HVKHCVCVVDLLGRAG
Sbjct: 425 MKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAG 484
Query: 604 RLIDAESLILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYN 663
RL+DAESLIL LGF+HEPVMWRALLSACRIHKDTFTAQRVAQK+IELEPLASASYVLLYN
Sbjct: 485 RLVDAESLILRLGFEHEPVMWRALLSACRIHKDTFTAQRVAQKVIELEPLASASYVLLYN 544
Query: 664 IYMDAGNKSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDK 723
IYMDAGNK ASKVRKLMED++IKKEPGLSWIQ+G+KVYSFVSGDRSH+NSE IYAKLD+
Sbjct: 545 IYMDAGNKLAASKVRKLMEDQKIKKEPGLSWIQIGNKVYSFVSGDRSHENSERIYAKLDE 604
Query: 724 MLARTKRLDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLD 783
MLARTKRLDSAKD YKIEHEY+TNVNYHSEKLAVAFGVLHL+ESAPVRVMKNLRICLD
Sbjct: 605 MLARTKRLDSAKDALGYKIEHEYLTNVNYHSEKLAVAFGVLHLAESAPVRVMKNLRICLD 664
Query: 784 CHMTMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
CHMTMKLFSIVEKRE+ILRDSVRFHHFKDG CSCGDY
Sbjct: 665 CHMTMKLFSIVEKRELILRDSVRFHHFKDGLCSCGDY 701
BLAST of Lsi08G001020 vs. NCBI nr
Match:
gi|645224258|ref|XP_008219023.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 [Prunus mume])
HSP 1 Score: 1003.8 bits (2594), Expect = 2.5e-289
Identity = 506/814 (62.16%), Postives = 610/814 (74.94%), Query Frame = 1
Query: 11 QPIESFATLELISLSSSQVSPAYSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRT 70
QP S L + S Q S N L++V Y KL+Q +TKTG+L HGKL H HM++T
Sbjct: 29 QPNNSHPMLPQTTPLSQQSSQHCHPNYSLDNVTYTKLIQYSTKTGSLVHGKLAHVHMVKT 88
Query: 71 SFRPCLFLQNNLLNMYCKCGDTHSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILF 130
F+PCLFL NNLLNMYCK G+ SA LFDKM K N+I+YNSLISGY Q+G DK M +F
Sbjct: 89 CFKPCLFLLNNLLNMYCKRGELDSACNLFDKMPKRNVISYNSLISGYTQVGLFDKAMGVF 148
Query: 131 NKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKC 190
N+AR GLKLDK+T AGAL C Q+ ++ GK++HGLI++ GLGS VVLTNSL+DMYSKC
Sbjct: 149 NEARMAGLKLDKFTYAGALCVCGQTCDVELGKLVHGLIVLSGLGSDVVLTNSLMDMYSKC 208
Query: 191 GQVDQARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSAL 250
G+VD A+ILF++SD LD VSWNSLIA Y + G EE L L KMHQ G + NT+TLGSAL
Sbjct: 209 GRVDHAKILFENSDNLDDVSWNSLIASYARIGANEETLRTLVKMHQRGFSLNTYTLGSAL 268
Query: 251 KACSSNFSGCKMFGTMLHNLAIKLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKN 310
KAC NF ++FG +LH +KLGL LDVVVGTALLDMY KTG LGDAIQIF M +N
Sbjct: 269 KACCKNFDNSELFGKLLHGYMVKLGLDLDVVVGTALLDMYAKTGDLGDAIQIFKVMPYRN 328
Query: 311 VVMYNAMMAGLLQQETIEDKFAYKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFA 370
VVMYNAM+AG LQ +T + A + NL +M+ G+KPS FT+S +L+AC +VE FE+
Sbjct: 329 VVMYNAMIAGFLQIDTFSYEHAKEVFNLLSQMQRLGVKPSTFTFSIILRACKSVEAFEYG 388
Query: 371 KQVHALICKNGLQSDEYIGSVLIDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQN 430
KQVH +CK LQ DE+IGS LID Y LG +DAL CFN IV T+M+ GY+QN
Sbjct: 389 KQVHTQVCKYNLQGDEFIGSGLIDFYFSLGLFEDALKCFNLTPRLDIVSWTSMVAGYIQN 448
Query: 431 GEFESALSLFYELLTSEEKPDEFILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQ 490
GE ESA LFY+LL S +KPDEFI+S++L ACAN+ RSGEQIQGYA K G+ +FTI Q
Sbjct: 449 GETESAFDLFYKLLASGKKPDEFIISSMLGACANLAAARSGEQIQGYAVKAGVGKFTIVQ 508
Query: 491 NSQIWMYAKSGDPYSANLTFQQMENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIE 550
NSQI MYAKSGD SANLTF + ENP+ VSWS MICS AQHG A EA+ FELMK+CGI
Sbjct: 509 NSQICMYAKSGDIDSANLTFTETENPDVVSWSVMICSKAQHGCAWEALELFELMKNCGIA 568
Query: 551 PNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAES 610
PNH FLGVL ACSH GLVEEGLRYF+ M+ DY MT +V+HC C VDLLGRAGRL+DAE+
Sbjct: 569 PNHITFLGVLTACSHGGLVEEGLRYFEIMKNDYGMTTNVQHCACAVDLLGRAGRLVDAEN 628
Query: 611 LILHLGFKHEPVMWRALLSACRIHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGN 670
I + GF+ PVMWRALLSACR++KDT A+RVA+KLI LEP A+ASYVLLYNIY DAG
Sbjct: 629 FIFNSGFEDNPVMWRALLSACRVYKDTVAAKRVAEKLINLEPQAAASYVLLYNIYNDAGI 688
Query: 671 KSDASKVRKLMEDRRIKKEPGLSWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKR 730
+ A K+R+LM DR +KKEPGLSWI+VG+KV+SFVSGD+SH+ +LIY +L++ML + K+
Sbjct: 689 ELPAKKIRELMTDRGVKKEPGLSWIEVGNKVHSFVSGDQSHQMIQLIYVRLEEMLGKMKK 748
Query: 731 ----LDSAKDTSDYKIEHEYMTNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHM 790
+ S + D K+ H YHSE LAV FG++ L +SAPVRVMKNLR+C DCH
Sbjct: 749 IGCMMTSGPEIKDRKVVH-------YHSEMLAVTFGIISLPQSAPVRVMKNLRVCSDCHT 808
Query: 791 TMKLFSIVEKREIILRDSVRFHHFKDGSCSCGDY 821
TMKLFS VEKREIILRD +RFHHF+DG+CSC DY
Sbjct: 809 TMKLFSEVEKREIILRDPIRFHHFRDGACSCRDY 835
BLAST of Lsi08G001020 vs. NCBI nr
Match:
gi|225460338|ref|XP_002280412.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13880 isoform X2 [Vitis vinifera])
HSP 1 Score: 964.5 bits (2492), Expect = 1.7e-277
Identity = 484/793 (61.03%), Postives = 610/793 (76.92%), Query Frame = 1
Query: 33 YSLNILLESVDYVKLVQSATKTGNLNHGKLVHSHMIRTSFRPCLFLQNNLLNMYCKCGDT 92
Y L + L+SV Y KLVQ +T+TG+L HGKL H HMI+T F+PCLFL NNLL MYCKCG+T
Sbjct: 11 YYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGET 70
Query: 93 HSADKLFDKMSKPNIITYNSLISGYIQIGNHDKVMILFNKARRLGLKLDKYTCAGALTAC 152
A KLFD+M K N++++NSLISGY Q+G + +VM LF +AR L+LDK+T + AL+ C
Sbjct: 71 DVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130
Query: 153 SQSGNLSAGKMIHGLILVCGLGSQVVLTNSLIDMYSKCGQVDQARILFDHSDKLDGVSWN 212
++ +L G++IH LI V GLG V+LTNSLIDMY KCG++D AR++F+ +D+LD VSWN
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190
Query: 213 SLIAGYVQNGKYEELLTILQKMHQYGLAFNTFTLGSALKACSSNFSGCKMFGTMLHNLAI 272
SLIAGYV+ G +E+L +L KM ++GL N++ LGSALKAC SNFS G MLH A+
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 273 KLGLHLDVVVGTALLDMYTKTGSLGDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKFA 332
KLGL LDVVVGTALLD Y K G L DA +IF M D NVVMYNAM+AG LQ ET+ D+FA
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310
Query: 333 YKALNLFFEMKSCGIKPSMFTYSSLLKACITVEDFEFAKQVHALICKNGLQSDEYIGSVL 392
+A+ LFFEM+S G+KPS FT+SS+LKAC T+E FE KQ+HA I K LQSDE+IG+ L
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNAL 370
Query: 393 IDLYSLLGSMKDALSCFNSIHISKIVPMTAMMVGYLQNGEFESALSLFYELLTSEEKPDE 452
++LYSL GS++D L CF+S +V T+++VG++QNG+FE L+LF+ELL S KPDE
Sbjct: 371 VELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDE 430
Query: 453 FILSTILSACANMGMLRSGEQIQGYATKIGISRFTIFQNSQIWMYAKSGDPYSANLTFQQ 512
F +S +LSACAN+ ++SGEQI YA K GI FTI QNSQI MYAK GD SAN+TF++
Sbjct: 431 FTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490
Query: 513 MENPNAVSWSTMICSSAQHGHAVEAMRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 572
+NP+ VSWS MI S+AQHG A EA+ FELMK GI PNH FLGVL+ACSH GLVEEG
Sbjct: 491 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 550
Query: 573 LRYFDTMEKDYNMTIHVKHCVCVVDLLGRAGRLIDAESLILHLGFKHEPVMWRALLSACR 632
LRYF+ M+KD+ +T +VKH C+VDLLGRAGRL +AES I+ GF+ +PVMWR+LLSACR
Sbjct: 551 LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACR 610
Query: 633 IHKDTFTAQRVAQKLIELEPLASASYVLLYNIYMDAGNKSDASKVRKLMEDRRIKKEPGL 692
+HK T T +RVA+++IELEP A+ASYVLLYNIY DAG + A+++R LM+DR +KKEPGL
Sbjct: 611 VHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGL 670
Query: 693 SWIQVGDKVYSFVSGDRSHKNSELIYAKLDKMLARTKRLD-----SAKDTSDYKIEHEYM 752
SWI+VG+ V+SFV+GDRSH NS++IY +L++ML K+LD D S+ K H+
Sbjct: 671 SWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPK--HKDN 730
Query: 753 TNVNYHSEKLAVAFGVLHLSESAPVRVMKNLRICLDCHMTMKLFSIVEKREIILRDSVRF 812
+ V+YHSEKLAV FG++ L SAPVRVMKNLR C CH TMKLFS +E REIILRD +RF
Sbjct: 731 SMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRF 790
Query: 813 HHFKDGSCSCGDY 821
H F+DGSCSCGDY
Sbjct: 791 HRFRDGSCSCGDY 801
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP228_ARATH | 1.6e-203 | 52.75 | Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN... | [more] |
PP172_ARATH | 8.9e-146 | 37.76 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... | [more] |
PP272_ARATH | 1.7e-136 | 36.13 | Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... | [more] |
PP347_ARATH | 3.1e-130 | 37.66 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN... | [more] |
PP320_ARATH | 1.4e-127 | 34.97 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KSU3_CUCSA | 0.0e+00 | 89.88 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648690 PE=4 SV=1 | [more] |
M5Y697_PRUPE | 1.4e-275 | 63.19 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017671mg PE=4 SV=1 | [more] |
B9S753_RICCO | 1.0e-273 | 60.00 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
F6I3W2_VITVI | 9.2e-267 | 61.18 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01110 PE=4 SV=... | [more] |
A0A118JTP6_CYNCS | 1.7e-249 | 55.19 | Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007343 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G13880.1 | 9.0e-205 | 52.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G27610.1 | 5.0e-147 | 37.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G49170.1 | 9.5e-138 | 36.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33170.1 | 1.7e-131 | 37.66 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 8.0e-129 | 34.97 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |