Lsi07G012820 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi07G012820
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor 10
Locationchr07 : 18716823 .. 18717521 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATCCTCTTCACAGATTCCAATTTCACTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCATCAGATATCAAAAATTGTATCAAAGAAAAAAACTCCAAGAAACTTAAACTCGTAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTAATTCCGCTTACCTTAACTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCTGCTGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTCCTCGATTCAACTCACGATGATGAACACAACGGCGCCGTGAAATCTGACCTCAATCTCAATCGTTCTCCTTCCTCCACCATTGCTGCGAAATCGTCAGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCGCAAGTTCTTCCAATTGACGGTTTCGACTCTGTTTTTACACGGCCGCCGTCGCCGTCTCCGTCGTCTGATTATTTCGCTTACAGAGGTAGCCTACTCTAG

mRNA sequence

ATGGAAGATCCTCTTCACAGATTCCAATTTCACTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCATCAGATATCAAAAATTGTATCAAAGAAAAAAACTCCAAGAAACTTAAACTCGTAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTAATTCCGCTTACCTTAACTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCTGCTGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTCCTCGATTCAACTCACGATGATGAACACAACGGCGCCGTGAAATCTGACCTCAATCTCAATCGTTCTCCTTCCTCCACCATTGCTGCGAAATCGTCAGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCGCAAGTTCTTCCAATTGACGGTTTCGACTCTGTTTTTACACGGCCGCCGTCGCCGTCTCCGTCGTCTGATTATTTCGCTTACAGAGGTAGCCTACTCTAG

Coding sequence (CDS)

ATGGAAGATCCTCTTCACAGATTCCAATTTCACTCTCAATCTTCTTCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCATCAGATATCAAAAATTGTATCAAAGAAAAAAACTCCAAGAAACTTAAACTCGTAAACGACGGCAAACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCCACGCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACTATCAAAGGTAATTCCGCTTACCTTAACTTCCCTGAATTAGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCTCCTAAAGACATTCGAGCTGCTGCCGCTAAAGCCGCTTCGTTTTCCACTAATAATCTCCTCGATTCAACTCACGATGATGAACACAACGGCGCCGTGAAATCTGACCTCAATCTCAATCGTTCTCCTTCCTCCACCATTGCTGCGAAATCGTCAGGTGAAATTGACGATCCTTTCTTCGATCTCCCCGATCTGTTCCTTGATGATCCCAATCATCAAATTGATACATTCTGTTTCTCGCAAGTTCTTCCAATTGACGGTTTCGACTCTGTTTTTACACGGCCGCCGTCGCCGTCTCCGTCGTCTGATTATTTCGCTTACAGAGGTAGCCTACTCTAG

Protein sequence

MEDPLHRFQFHSQSSSSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQIDTFCFSQVLPIDGFDSVFTRPPSPSPSSDYFAYRGSLL
BLAST of Lsi07G012820 vs. Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-40
Identity = 99/177 (55.93%), Postives = 114/177 (64.41%), Query Frame = 1

Query: 20  SSSSSSSSDIKNCIKEKNSKKLKLVND----GKHPTYRGVRMRQWGKWVSEIREPKKKSR 79
           SSS  S  ++++ + EK  K  K  N+     K P +RGVRMRQWGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 80  IWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASF 139
           IWLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+ AAA AA+ 
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 140 STNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNH 193
                               D     SPSST+   SS   DD F DLPDL LD  +H
Sbjct: 124 --------------------DWKAPESPSSTVT--SSPVADDAFSDLPDLLLDVNDH 158

BLAST of Lsi07G012820 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.3e-40
Identity = 101/177 (57.06%), Postives = 116/177 (65.54%), Query Frame = 1

Query: 33  IKEKNSKKLKLVND-----GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMA 92
           +K K  KK    +D      KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMA
Sbjct: 21  VKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMA 80

Query: 93  ARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDD 152
           ARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+AAAA AA+             
Sbjct: 81  ARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAA------------- 140

Query: 153 EHNGAVKSDLNL---NRSPSSTIAAKSSGEI----DDPFFDLPDLFLDDPNHQIDTF 198
               AV  D+++   + SPS T+   SS  +    DD F DLPDL L + NH ID F
Sbjct: 141 ----AVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLL-NVNHNIDGF 179

BLAST of Lsi07G012820 vs. Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-37
Identity = 112/249 (44.98%), Postives = 136/249 (54.62%), Query Frame = 1

Query: 15  SSSSSSSSSSSSSDIKNCIKEKNSK-------------------------KLKLVNDG-K 74
           SSS ++SSSSSSS   N I+E NSK                         K +  N G K
Sbjct: 37  SSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDK 96

Query: 75  HPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFP 134
           HPTYRGVRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNFP
Sbjct: 97  HPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFP 156

Query: 135 ELAHRLPRPASSSPKDIRAAAAKAA---SFSTNNLLDS-------------------THD 194
           +LA  LPRP ++SPKDI+AAA+ AA     S N++ +S                   + D
Sbjct: 157 KLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSD 216

Query: 195 DEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQI--DTFC-FSQVL 213
                  +S      S +ST A       ++  FDLPDLF D+    I  D FC +S   
Sbjct: 217 TSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTW 276

BLAST of Lsi07G012820 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 1

Query: 14  SSSSSSSSSSSSSSDIKNCIKEKNS----KKLKLVNDGKHPT-YRGVRMRQWGKWVSEIR 73
           SSS  +SSS S S+  ++ +++ +S    +K  + +D K+PT YRGVRMR WGKWVSEIR
Sbjct: 28  SSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIR 87

Query: 74  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAA 133
           EP+KKSRIWLGT+ T EMAARAHDVAA  IKGNS +LNFPEL+  LPRP S SPKDI+AA
Sbjct: 88  EPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAA 147

Query: 134 AAKAASFST--NNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEI--------DDP 193
           A KAA  +T    ++D    DE + +       + + SS + +  + E         ++ 
Sbjct: 148 ATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEET 207

Query: 194 FFDLPDLFLDDPNHQIDTFC 199
            FDLPDLF D   +  D FC
Sbjct: 208 VFDLPDLFTDGLMNPNDAFC 227

BLAST of Lsi07G012820 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-33
Identity = 84/148 (56.76%), Postives = 103/148 (69.59%), Query Frame = 1

Query: 50  PTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPE 109
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTFSTPEMAARAHD AA TIKG SA LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 110 LAHRLPRPASSSPKDIRAAAAKAASF----STNNLLDS--------THDDEHNGAVKSDL 169
           LA  LPRPASSSP+D++AAAA AA+     S+++L+ S              + +  +  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 170 NLNRSPSSTIAAKSSGEIDDPFFDLPDL 186
           + + SPSS  AA ++ E+ +   +LP L
Sbjct: 161 SSSLSPSSEEAASTAEELSE-IVELPSL 187

BLAST of Lsi07G012820 vs. TrEMBL
Match: A0A0A0L472_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019400 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 5.0e-92
Identity = 181/232 (78.02%), Postives = 192/232 (82.76%), Query Frame = 1

Query: 1   MEDPLHRFQFHSQSSSSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQW 60
           MEDPL RFQ HSQS        SSSSSDIKNCIK+K SKK+K+ ND KHPTYRGVRMRQW
Sbjct: 1   MEDPLQRFQLHSQS--------SSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQW 60

Query: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASS 120
           GKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA+TIKG+SAYLNFPELAHRLPRPASS
Sbjct: 61  GKWVSEIREPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASS 120

Query: 121 SPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFF 180
           SPKDIRAAAAKAA F          +DE N   KS++NLN   SS +A KS GEIDD FF
Sbjct: 121 SPKDIRAAAAKAALF----------NDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFF 180

Query: 181 DLPDLFLDDPNHQIDTFCFSQVLPIDGFDSVFTRPPSPSPSSDYFAYRGSLL 233
           DLPDLF+DDPNHQIDTFCFSQ +PIDGFDSVFTRP SPS SSDYF YRGSLL
Sbjct: 181 DLPDLFIDDPNHQIDTFCFSQFVPIDGFDSVFTRPSSPSSSSDYFTYRGSLL 214

BLAST of Lsi07G012820 vs. TrEMBL
Match: A0A061G3Z0_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_015930 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 124/214 (57.94%), Postives = 144/214 (67.29%), Query Frame = 1

Query: 1   MEDPLHRFQFHSQSSSSSSSSSSSSSSDIK------NCIKEKNSKKLKLVND---GKHPT 60
           ME PL   +F +QSS+SSSSS  +S S  +        +K  N  K K+ ND   GKHPT
Sbjct: 1   MEVPLFA-EFETQSSASSSSSPLASESSTRFKSKKVEKVKNANESKRKVKNDEVEGKHPT 60

Query: 61  YRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELA 120
           YRGVRMRQWGKWVSEIREP+KKSRIWLGTF T EMAARAHDVAA TIKG SAYLNFPE+A
Sbjct: 61  YRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALTIKGKSAYLNFPEIA 120

Query: 121 HRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAA-- 180
           H LPRP S+SPKDI+AAAAKAA+ +       +H+ E     + D    RSP+ST+ +  
Sbjct: 121 HELPRPVSASPKDIQAAAAKAATLN----YPKSHEVEAE-LSQVDQMFPRSPASTVTSHD 180

Query: 181 ---KSSGEI---DDPFFDLPDLFLDDPNHQIDTF 198
               SS  +   DD F DLPDL L D NHQID F
Sbjct: 181 TQDSSSSPLINNDDAFIDLPDLLL-DMNHQIDEF 207

BLAST of Lsi07G012820 vs. TrEMBL
Match: A5JNJ5_SOYBN (Dehydration-responsive element binding protein 6 OS=Glycine max GN=GLYMA_05G062100 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 116/198 (58.59%), Postives = 140/198 (70.71%), Query Frame = 1

Query: 16  SSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 75
           ++ S+SSSSS  +  N  KEK  KK    N+GKHPTYRGVRMRQWGKWVSEIREP+KKSR
Sbjct: 25  TTPSTSSSSSIEEATNTTKEK--KKKANSNEGKHPTYRGVRMRQWGKWVSEIREPRKKSR 84

Query: 76  IWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASF 135
           IWLGTF TP+MAARAHDVAA TIKG+SAYLNFPELA  LPRPAS+SPKDI+AAAAKAA+ 
Sbjct: 85  IWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELADELPRPASTSPKDIQAAAAKAAAL 144

Query: 136 STNNLLDSTHD--DEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQ 195
              +    +HD   E + AV S +    S SS+ ++   G +DD F DLPDL L D +H 
Sbjct: 145 DFGH---RSHDAESELSRAVSSSILTQASSSSSNSSSLKG-VDDTFLDLPDLSL-DLSHG 204

Query: 196 IDTFCFSQVLPIDGFDSV 212
            D F +S    + G + +
Sbjct: 205 ADEFHYSSAWLVAGAEHI 215

BLAST of Lsi07G012820 vs. TrEMBL
Match: A0A140WWF4_LOTCO (AP2/ERF OS=Lotus corniculatus GN=ERF011 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44
Identity = 110/181 (60.77%), Postives = 131/181 (72.38%), Query Frame = 1

Query: 17  SSSSSSSSSSSDIKNCIKE-KNSKK-LKLVNDGKHPTYRGVRMRQWGKWVSEIREPKKKS 76
           +++SSSSSS+ ++ N +K+ KN KK +K  NDGKHPTYRGVRMRQWGKWVSEIREP+KKS
Sbjct: 26  ATTSSSSSSAEEVTNMVKKNKNEKKGVKRSNDGKHPTYRGVRMRQWGKWVSEIREPRKKS 85

Query: 77  RIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAAS 136
           RIWLGTF TP+MAARAHDVAA TIKG+ AYLNFPELA  LPRPAS+SPKDI+ AAAKAA+
Sbjct: 86  RIWLGTFPTPDMAARAHDVAALTIKGSGAYLNFPELAAELPRPASTSPKDIQVAAAKAAA 145

Query: 137 FSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQI 196
                   S  + E   +  S  + N    S++     GE D+ F DLPDL LD  NH  
Sbjct: 146 TDFTWHRSSEAEAETTSSSSSSSSHNHKQGSSLL---KGE-DEMFLDLPDLSLDHLNHNA 202

BLAST of Lsi07G012820 vs. TrEMBL
Match: A0A0D2RPC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G175100 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44
Identity = 120/217 (55.30%), Postives = 138/217 (63.59%), Query Frame = 1

Query: 1   MEDPL---HRFQFHSQSSSSSSSSSSSS-----SSDIKNCIKEKNSKKLKLVN----DGK 60
           ME PL   H  +  +QSSSSSSSSSSSS     S+ I+   ++ N  K K  N    +GK
Sbjct: 1   MEVPLQAEHELELETQSSSSSSSSSSSSPLVIKSNKIQKLTQKTNENKRKFNNGDELEGK 60

Query: 61  HPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFP 120
           HP YRGVRMRQWGKWVSEIREP+KKSRIWLGTF T EMAARAHDVAA  IKG SAYLNFP
Sbjct: 61  HPAYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGKSAYLNFP 120

Query: 121 ELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTI- 180
           ++AH LPRP SSSPKDI+AAAAKAA+ S + +                    RSPS T  
Sbjct: 121 DIAHELPRPVSSSPKDIQAAAAKAAALSYDQMAP------------------RSPSCTAY 180

Query: 181 -------AAKSSGEIDDPFFDLPDLFLDDPNHQIDTF 198
                   + SS + DD F DLPDL + D NHQ+  F
Sbjct: 181 STVSHESTSSSSNDKDDAFIDLPDLLM-DMNHQMYEF 198

BLAST of Lsi07G012820 vs. TAIR10
Match: AT4G16750.1 (AT4G16750.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.7e-41
Identity = 99/177 (55.93%), Postives = 114/177 (64.41%), Query Frame = 1

Query: 20  SSSSSSSSDIKNCIKEKNSKKLKLVND----GKHPTYRGVRMRQWGKWVSEIREPKKKSR 79
           SSS  S  ++++ + EK  K  K  N+     K P +RGVRMRQWGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 80  IWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASF 139
           IWLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+ AAA AA+ 
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 140 STNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNH 193
                               D     SPSST+   SS   DD F DLPDL LD  +H
Sbjct: 124 --------------------DWKAPESPSSTVT--SSPVADDAFSDLPDLLLDVNDH 158

BLAST of Lsi07G012820 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 165.2 bits (417), Expect = 4.7e-41
Identity = 101/177 (57.06%), Postives = 116/177 (65.54%), Query Frame = 1

Query: 33  IKEKNSKKLKLVND-----GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMA 92
           +K K  KK    +D      KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMA
Sbjct: 21  VKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMA 80

Query: 93  ARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDD 152
           ARAHDVAA  IKG SA+LNFPELA+ LPRPAS+ PKDI+AAAA AA+             
Sbjct: 81  ARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAA------------- 140

Query: 153 EHNGAVKSDLNL---NRSPSSTIAAKSSGEI----DDPFFDLPDLFLDDPNHQIDTF 198
               AV  D+++   + SPS T+   SS  +    DD F DLPDL L + NH ID F
Sbjct: 141 ----AVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLL-NVNHNIDGF 179

BLAST of Lsi07G012820 vs. TAIR10
Match: AT2G44940.1 (AT2G44940.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-38
Identity = 112/249 (44.98%), Postives = 136/249 (54.62%), Query Frame = 1

Query: 15  SSSSSSSSSSSSSDIKNCIKEKNSK-------------------------KLKLVNDG-K 74
           SSS ++SSSSSSS   N I+E NSK                         K +  N G K
Sbjct: 37  SSSPTTSSSSSSSTNSNFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDK 96

Query: 75  HPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFP 134
           HPTYRGVRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNFP
Sbjct: 97  HPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFP 156

Query: 135 ELAHRLPRPASSSPKDIRAAAAKAA---SFSTNNLLDS-------------------THD 194
           +LA  LPRP ++SPKDI+AAA+ AA     S N++ +S                   + D
Sbjct: 157 KLAGELPRPVTNSPKDIQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSD 216

Query: 195 DEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQI--DTFC-FSQVL 213
                  +S      S +ST A       ++  FDLPDLF D+    I  D FC +S   
Sbjct: 217 TSTTTTTQSQEYSEASCASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTW 276

BLAST of Lsi07G012820 vs. TAIR10
Match: AT3G60490.1 (AT3G60490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 1

Query: 14  SSSSSSSSSSSSSSDIKNCIKEKNS----KKLKLVNDGKHPT-YRGVRMRQWGKWVSEIR 73
           SSS  +SSS S S+  ++ +++ +S    +K  + +D K+PT YRGVRMR WGKWVSEIR
Sbjct: 28  SSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIR 87

Query: 74  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAA 133
           EP+KKSRIWLGT+ T EMAARAHDVAA  IKGNS +LNFPEL+  LPRP S SPKDI+AA
Sbjct: 88  EPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAA 147

Query: 134 AAKAASFST--NNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEI--------DDP 193
           A KAA  +T    ++D    DE + +       + + SS + +  + E         ++ 
Sbjct: 148 ATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEET 207

Query: 194 FFDLPDLFLDDPNHQIDTFC 199
            FDLPDLF D   +  D FC
Sbjct: 208 VFDLPDLFTDGLMNPNDAFC 227

BLAST of Lsi07G012820 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-34
Identity = 84/148 (56.76%), Postives = 103/148 (69.59%), Query Frame = 1

Query: 50  PTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPE 109
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTFSTPEMAARAHD AA TIKG SA LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 110 LAHRLPRPASSSPKDIRAAAAKAASF----STNNLLDS--------THDDEHNGAVKSDL 169
           LA  LPRPASSSP+D++AAAA AA+     S+++L+ S              + +  +  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 170 NLNRSPSSTIAAKSSGEIDDPFFDLPDL 186
           + + SPSS  AA ++ E+ +   +LP L
Sbjct: 161 SSSLSPSSEEAASTAEELSE-IVELPSL 187

BLAST of Lsi07G012820 vs. NCBI nr
Match: gi|659095895|ref|XP_008448820.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 5.9e-94
Identity = 185/232 (79.74%), Postives = 194/232 (83.62%), Query Frame = 1

Query: 1   MEDPLHRFQFHSQSSSSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQW 60
           MEDPL RFQFHSQS        SSSSSDIKNCIKEK SKK+KL +DGKHPTYRGVRMRQW
Sbjct: 1   MEDPLQRFQFHSQS--------SSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQW 60

Query: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASS 120
           GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAA+TIKG+SAYLNFPELAHRLPRPASS
Sbjct: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASS 120

Query: 121 SPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFF 180
           SPKDIRAAAAKAA F          +DE N   KS+LNLN   SS +A KS GEIDD FF
Sbjct: 121 SPKDIRAAAAKAALF----------NDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFF 180

Query: 181 DLPDLFLDDPNHQIDTFCFSQVLPIDGFDSVFTRPPSPSPSSDYFAYRGSLL 233
           DLPDLF+DDPNHQIDTFCFSQ +PIDGFDSVFTRP SPS  SDYF YRGSLL
Sbjct: 181 DLPDLFIDDPNHQIDTFCFSQFVPIDGFDSVFTRPLSPSSPSDYFTYRGSLL 214

BLAST of Lsi07G012820 vs. NCBI nr
Match: gi|449458972|ref|XP_004147220.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 7.2e-92
Identity = 181/232 (78.02%), Postives = 192/232 (82.76%), Query Frame = 1

Query: 1   MEDPLHRFQFHSQSSSSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQW 60
           MEDPL RFQ HSQS        SSSSSDIKNCIK+K SKK+K+ ND KHPTYRGVRMRQW
Sbjct: 1   MEDPLQRFQLHSQS--------SSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQW 60

Query: 61  GKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASS 120
           GKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA+TIKG+SAYLNFPELAHRLPRPASS
Sbjct: 61  GKWVSEIREPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASS 120

Query: 121 SPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFF 180
           SPKDIRAAAAKAA F          +DE N   KS++NLN   SS +A KS GEIDD FF
Sbjct: 121 SPKDIRAAAAKAALF----------NDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFF 180

Query: 181 DLPDLFLDDPNHQIDTFCFSQVLPIDGFDSVFTRPPSPSPSSDYFAYRGSLL 233
           DLPDLF+DDPNHQIDTFCFSQ +PIDGFDSVFTRP SPS SSDYF YRGSLL
Sbjct: 181 DLPDLFIDDPNHQIDTFCFSQFVPIDGFDSVFTRPSSPSSSSDYFTYRGSLL 214

BLAST of Lsi07G012820 vs. NCBI nr
Match: gi|1009157064|ref|XP_015896573.1| (PREDICTED: ethylene-responsive transcription factor ERF038 [Ziziphus jujuba])

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 113/208 (54.33%), Postives = 138/208 (66.35%), Query Frame = 1

Query: 17  SSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRI 76
           +  SS  +S S+ K  +K   +      NDGKHPTYRGVRMRQWGKWVSEIREP+KKSRI
Sbjct: 61  AQKSSRGASGSEAKRNVKNNRN------NDGKHPTYRGVRMRQWGKWVSEIREPRKKSRI 120

Query: 77  WLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFS 136
           WLGTF T EMAARAHDVAA TIKGNSA+LNFPELA  LPRPA+SS KDI+AAAAKAA+F 
Sbjct: 121 WLGTFPTAEMAARAHDVAAITIKGNSAFLNFPELARELPRPATSSRKDIQAAAAKAAAFD 180

Query: 137 TNNLLDSTHDDEHNGAVKSD--LNLNRSPSSTI---------AAKSSGEIDDPFFDLPDL 196
                ++ HDDE     +    +N++ SP++T+         AA    + DD FF+LPDL
Sbjct: 181 YRRSHETPHDDEATEPRQDHEIINVSPSPTATVAYPETHDSSAASPLTDEDDAFFNLPDL 240

Query: 197 FLDDPNHQIDTFCFSQVLPIDGFDSVFT 214
             D  NHQ+D   +S   P+ G +   T
Sbjct: 241 LEDVNNHQVDEPSYSLPWPLAGAEPAET 262

BLAST of Lsi07G012820 vs. NCBI nr
Match: gi|351726616|ref|NP_001235341.1| (dehydration-responsive element binding protein 6 [Glycine max])

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 116/198 (58.59%), Postives = 140/198 (70.71%), Query Frame = 1

Query: 16  SSSSSSSSSSSSDIKNCIKEKNSKKLKLVNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 75
           ++ S+SSSSS  +  N  KEK  KK    N+GKHPTYRGVRMRQWGKWVSEIREP+KKSR
Sbjct: 25  TTPSTSSSSSIEEATNTTKEK--KKKANSNEGKHPTYRGVRMRQWGKWVSEIREPRKKSR 84

Query: 76  IWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASF 135
           IWLGTF TP+MAARAHDVAA TIKG+SAYLNFPELA  LPRPAS+SPKDI+AAAAKAA+ 
Sbjct: 85  IWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELADELPRPASTSPKDIQAAAAKAAAL 144

Query: 136 STNNLLDSTHD--DEHNGAVKSDLNLNRSPSSTIAAKSSGEIDDPFFDLPDLFLDDPNHQ 195
              +    +HD   E + AV S +    S SS+ ++   G +DD F DLPDL L D +H 
Sbjct: 145 DFGH---RSHDAESELSRAVSSSILTQASSSSSNSSSLKG-VDDTFLDLPDLSL-DLSHG 204

Query: 196 IDTFCFSQVLPIDGFDSV 212
            D F +S    + G + +
Sbjct: 205 ADEFHYSSAWLVAGAEHI 215

BLAST of Lsi07G012820 vs. NCBI nr
Match: gi|590676594|ref|XP_007039780.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 124/214 (57.94%), Postives = 144/214 (67.29%), Query Frame = 1

Query: 1   MEDPLHRFQFHSQSSSSSSSSSSSSSSDIK------NCIKEKNSKKLKLVND---GKHPT 60
           ME PL   +F +QSS+SSSSS  +S S  +        +K  N  K K+ ND   GKHPT
Sbjct: 1   MEVPLFA-EFETQSSASSSSSPLASESSTRFKSKKVEKVKNANESKRKVKNDEVEGKHPT 60

Query: 61  YRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGNSAYLNFPELA 120
           YRGVRMRQWGKWVSEIREP+KKSRIWLGTF T EMAARAHDVAA TIKG SAYLNFPE+A
Sbjct: 61  YRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALTIKGKSAYLNFPEIA 120

Query: 121 HRLPRPASSSPKDIRAAAAKAASFSTNNLLDSTHDDEHNGAVKSDLNLNRSPSSTIAA-- 180
           H LPRP S+SPKDI+AAAAKAA+ +       +H+ E     + D    RSP+ST+ +  
Sbjct: 121 HELPRPVSASPKDIQAAAAKAATLN----YPKSHEVEAE-LSQVDQMFPRSPASTVTSHD 180

Query: 181 ---KSSGEI---DDPFFDLPDLFLDDPNHQIDTF 198
               SS  +   DD F DLPDL L D NHQID F
Sbjct: 181 TQDSSSSPLINNDDAFIDLPDLLL-DMNHQIDEF 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ERF39_ARATH4.9e-4055.93Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF38_ARATH8.3e-4057.06Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF34_ARATH6.6e-3744.98Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF35_ARATH3.3e-3649.00Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF37_ARATH3.4e-3356.76Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03... [more]
Match NameE-valueIdentityDescription
A0A0A0L472_CUCSA5.0e-9278.02Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019400 PE=4 SV=1[more]
A0A061G3Z0_THECC1.6e-4557.94Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T... [more]
A5JNJ5_SOYBN1.6e-4558.59Dehydration-responsive element binding protein 6 OS=Glycine max GN=GLYMA_05G0621... [more]
A0A140WWF4_LOTCO2.3e-4460.77AP2/ERF OS=Lotus corniculatus GN=ERF011 PE=2 SV=1[more]
A0A0D2RPC8_GOSRA2.3e-4455.30Uncharacterized protein OS=Gossypium raimondii GN=B456_003G175100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16750.12.7e-4155.93 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.14.7e-4157.06 ERF family protein 38[more]
AT2G44940.13.7e-3844.98 Integrase-type DNA-binding superfamily protein[more]
AT3G60490.11.8e-3749.00 Integrase-type DNA-binding superfamily protein[more]
AT1G77200.11.9e-3456.76 Integrase-type DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659095895|ref|XP_008448820.1|5.9e-9479.74PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo][more]
gi|449458972|ref|XP_004147220.1|7.2e-9278.02PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus... [more]
gi|1009157064|ref|XP_015896573.1|1.0e-4554.33PREDICTED: ethylene-responsive transcription factor ERF038 [Ziziphus jujuba][more]
gi|351726616|ref|NP_001235341.1|2.3e-4558.59dehydration-responsive element binding protein 6 [Glycine max][more]
gi|590676594|ref|XP_007039780.1|2.3e-4557.94Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G012820.1Lsi07G012820.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 74..90
score: 2.2E-10coord: 52..63
score: 2.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 51..109
score: 5.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 51..100
score: 1.9
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 51..114
score: 1.2
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 51..108
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 51..109
score: 1.9
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 12..188
score: 9.6
NoneNo IPR availablePANTHERPTHR31985:SF11ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF035coord: 12..188
score: 9.6

The following gene(s) are paralogous to this gene:

None